CSPI03G20100 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI03G20100
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	transportin-3 isoform X2
Location	Chr3: 15879400 .. 15882797 (-)
RNA-Seq Expression	CSPI03G20100
Synteny	CSPI03G20100

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCCTCTCTGATACCATATTGAAAGTAGACACAAAGAACACACAGATTTACATGGCAACTCAAGTACTGGAAGAAAAACCACGATATTTTTTTTCTTATTATTTTATGATGAATCATAAAGGTACAAAGTGGAAAAATTTATAAGCAACTCGAACCTAATTAAAGGAATAAAAAATTAGGACAAAGTAAATCTTAACTACCCATGGACTTTCACCATGACCTAAGTCCATTAATTCTAACAATAACTATTAGTTTGAGTCTAAATTGAGACAATCCCAAAGTTCATATTTAAATTCATACAATTATTAGTTTTGGATTTAAATTGATACAACTCAAAGTTTAGAGTTAAAATTGATATTTACTTGTATATATGCAGAAAGAAATACGTAATTTAAAAATATTTGCTTGTATATATGTAGAAAGAAATACGTAGTTTAGCAATTTTAAGACAAGCATGGGAACCTGCTATTTCGTACGGGTGTAAAATCCCAATATTTGAGCACTTGAAACAGTGAAAACGTCCGTGCATCATTCATGATGTTAATGAATTGTGTGGGGTGTTCTTGTTTGTGAACTTCGTTGTCATCTTCTTTTTTATTCTATATATGTGGGGCCTGCTTGTAAATGAACATGGTCTTTTGTGTGTATAATAACATGCTTCGGGTAGTTTTCTAGGAGTTATGAATTGAAGAAAATTAAACGATCTCTTAGCTTTTCTTTCATCCTTGAGTTATATAGTAAAATATTTTTGTTACTGCTCATTATGTTCCATAAGCTTTTGGAGGTCTTTTGCTGTTTTGTTGGGATTCTTTCATTCTCTTTTTGCTAAATTTCGTGCATGAAGGAAATTGTTTCTTATCTAGTTGAATATTGCAAGCAGTGCAGTGAATTTAACACGTGACCTCTTATGCAGGTTCACAAGTGTGCAACAATTCTGCAACAGTTGGCAGCAATTTGCAGTGTCAGTGAAAGAACAGACTTGAAACCTATCCTGCGCTGGGAATCTTTGCATGGCTGGCTACTATCAGCGGTTCTCTCTCTCTCTCTACGTACACACATACACATATCAGTTTGTAAATATTGACTCTACATATTGGTTATAATTAAAAAGGACGAAGATTTTGCTAGGGTTCACTATACTATAATTTACTTTCTAAGCGTTTTAATAGTTAGAAAGCAGATTAAAGACAAAATGCATGTACTAAAAGATACTCGTTTCAGCTATATTTCTGAAAAATATACGAGAGGAAACCCTCACGACCAATTCAGCTAAGTGTCAAAGACCGTTGACAGCTACTGCTAGTCGCAAACCTTCTCTTCCGAAAGAACCTATTTGCCCACTGACTTTCGGCAATAATACAAACAAATAAATCCTGCGTAATTTTTAATAGAGACCTAATGTAGTTACCTCTGGTACCATGAGCTGGTAGGATATATTTGCTGTATTTAGAAAAATAAATCTTAATAGATAACAATAACTTATGAGACCACCAATCATCCTAGTATAAGAGGAAGGGCAAGAATGTAATTGTGGGAGGAAGTTAGTTATGTATGGGAGTGAGGAACGGGAATATTATGCAATAGGGTGAGGAGACCATTTTAGTACTGAGGTAGGAAGAGGTAGTATAAGTAATAGAGATTGGTATTTCCTTTTTCTTCAGCTTGTAATTAGTATTAGTCTCTCACAGTGAGAGGAGTGGTAGCCTTACGGCTTTTTCTTCATTCACTAATACTTGTTTGTAAGGGGATACCTTACATAACTACAGGGGTTTAACATAGGATGTTACGAAATCAAATATGATCTAAATTAATCTTTTTATTCACATAAATGAGTAAAAAATACATAACTTTTTTTTTTTTCAAATGTAAACAAGAATTTAATTGAAATCTCCTCTCCAATTAGACTTCAGAGAAACTTTCCTCATTGGACTCTTTCCCTTCCATTTGCTGCCTCTGCTTCAGGATATGGAACTCCTCGACCACATTTTGTTCCCCTTCTGTTGTCACAAAAAGTTTTACTTCTACCATACAGTATTGGATCATGAATTATTGATATGGCACTTTATCGTCACAATAGATTTGTAGAATTATTGATATGGCACTTTATCGTCACAATAAATTTGTAGACTTACTTTGACGAAACCTCAATTCTTCAAGTATCCCTTTGATCTTTGTCTTCAAAAGAAAATTGGGTTAATGCTCTAAACTCTGCATTTTTGGTTTTTGGGTAGTCTTGATTGAAGAATTTGTCTTCTTGATGAATAGCTCCAAAAACCAGGTTTTAAGTCTTTCATCATTTTTTCAAGAAAAAGCGTGTTAACACCTAAAATAGTACCCTGCCACCAACATGAAAGAATAGGGACACTGTAAGAATAGGATTGTTAACATCTTCACAACTAACTGGTTTTTAGATCCGTGGCTGCTGTTCTATGCATGAAATGAAATCGTGGCTCAGTTTAAAATTTATTTGCAAACAGAATTTTTAACTTTGTCATTTTAATTCTTAAAGGTGTAGACTTTTTTCCAGGTGCAGGCTCTCCCACTTGAATATTTAAAACCAGGGGAAGTTGAAAGTCTTGTCCCACTATGGTTAAAGGCTCTTGGAGATGCAGCCTGTGACTATCTTGAAAGTAAAAGTTGTGACGAAGTAAAGGCTAATTATGGACATATGCAAGGGAAGGGTGGAAGAGTCCTGAAGCGTCTAGTCCGTGAATTTGCTGATGGTCACCGCAATGTGACTTAATTGTTGCATGGCATTTATACATCATTAGAGGACCCCAGCTCTTTGCTTTTCTGCTTATGGCCTCTTCTGTTGTTGAGGTGCATTGGGCAGTTGAATGTTGAAGCTGGTTTGGAAACTTTGGTCAATATTGGGCAATTTCCTGCATAAAATTATAACCATCCTCTGTAGCTACTTCTCTTCTTTCTTTTTTGTACAGTCCCGTATTTAAATTTTGTTAAATCACCAAAGGTTGAAATTTTGTTCATATCATTCATTCTTTTTTGCCTTTCAAGCCCAGGTCAGAATTTTGTGGCTATTGGAGATGGTACAGTAATTTTTTCTAATTACCTCCAAGCTGCTCGGTGTTCGTGAGATAGCCGTATAAGCTGTGGTTACTCACTCTTGAGGAATGAAAAGACGAACTAGAAACACATTATTTATTGGTAAAGAAAACATTGCAGAAGCTAAAAAAATACTTAGCGAAGATCGGACGAATTCCTTGGATGAAAGCCAGCGTTTTGGGGATGAACAGATGTGATCTTGTTTCCTCCACTTCTCTTACAATAGAAACGACAGTTAATAAAGTTGCTTGTATTGAAGTATTTCACATTGTAGTGTCTTAAATTTGACCCACGAAGTTTGGAGTTTTTTTGCTTTTGTTTTTGTTTCTTTT

mRNA sequence

ATGTCCCTCTCTGATACCATATTGAAAGTAGACACAAAGAACACACAGATTTACATGGCAACTCAAGTTCACAAGTGTGCAACAATTCTGCAACAGTTGGCAGCAATTTGCAGTGTCAGTGAAAGAACAGACTTGAAACCTATCCTGCGCTGGGAATCTTTGCATGGCTGGCTACTATCAGCGGTGCAGGCTCTCCCACTTGAATATTTAAAACCAGGGGAAGTTGAAAGTCTTGTCCCACTATGGTTAAAGGCTCTTGGAGATGCAGCCTGTGACTATCTTGAAAGTAAAAGTTGTGACGAAGTAAAGGCTAATTATGGACATATGCAAGGGAAGGGTGGAAGAGTCCTGAAGCGTCTAGTCCGTGAATTTGCTGATGGTCACCGCAATGTGACTTAATTGTTGCATGGCATTTATACATCATTAGAGGACCCCAGCTCTTTGCTTTTCTGCTTATGGCCTCTTCTGTTGTTGAGGTGCATTGGGCAGTTGAATGTTGAAGCTGGTTTGGAAACTTTGGTCAATATTGGGCAATTTCCTGCATAAAATTATAACCATCCTCTGTAGCTACTTCTCTTCTTTCTTTTTTGTACAGTCCCGTATTTAAATTTTGTTAAATCACCAAAGGTTGAAATTTTGTTCATATCATTCATTCTTTTTTGCCTTTCAAGCCCAGGTCAGAATTTTGTGGCTATTGGAGATGGTACAGTAATTTTTTCTAATTACCTCCAAGCTGCTCGGTGTTCGTGAGATAGCCGTATAAGCTGTGGTTACTCACTCTTGAGGAATGAAAAGACGAACTAGAAACACATTATTTATTGGTAAAGAAAACATTGCAGAAGCTAAAAAAATACTTAGCGAAGATCGGACGAATTCCTTGGATGAAAGCCAGCGTTTTGGGGATGAACAGATGTGATCTTGTTTCCTCCACTTCTCTTACAATAGAAACGACAGTTAATAAAGTTGCTTGTATTGAAGTATTTCACATTGTAGTGTCTTAAATTTGACCCACGAAGTTTGGAGTTTTTTTGCTTTTGTTTTTGTTTCTTTT

Coding sequence (CDS)

ATGTCCCTCTCTGATACCATATTGAAAGTAGACACAAAGAACACACAGATTTACATGGCAACTCAAGTTCACAAGTGTGCAACAATTCTGCAACAGTTGGCAGCAATTTGCAGTGTCAGTGAAAGAACAGACTTGAAACCTATCCTGCGCTGGGAATCTTTGCATGGCTGGCTACTATCAGCGGTGCAGGCTCTCCCACTTGAATATTTAAAACCAGGGGAAGTTGAAAGTCTTGTCCCACTATGGTTAAAGGCTCTTGGAGATGCAGCCTGTGACTATCTTGAAAGTAAAAGTTGTGACGAAGTAAAGGCTAATTATGGACATATGCAAGGGAAGGGTGGAAGAGTCCTGAAGCGTCTAGTCCGTGAATTTGCTGATGGTCACCGCAATGTGACTTAA

Protein sequence

MSLSDTILKVDTKNTQIYMATQVHKCATILQQLAAICSVSERTDLKPILRWESLHGWLLSAVQALPLEYLKPGEVESLVPLWLKALGDAACDYLESKSCDEVKANYGHMQGKGGRVLKRLVREFADGHRNVT*

Homology

[Close]

BLAST of CSPI03G20100 vs. ExPASy TrEMBL
Match: A0A0A0L9N1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G253510 PE=4 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 2.7e-57
Identity = 110/111 (99.10%), Postives = 111/111 (100.00%), Query Frame = 0


Query: 22  QVHKCATILQQLAAICSVSERTDLKPILRWESLHGWLLSAVQALPLEYLKPGEVESLVPL 81
           +VHKCATILQQLAAICSVSERTDLKPILRWESLHGWLLSAVQALPLEYLKPGEVESLVPL
Sbjct: 7   EVHKCATILQQLAAICSVSERTDLKPILRWESLHGWLLSAVQALPLEYLKPGEVESLVPL 66

Query: 82  WLKALGDAACDYLESKSCDEVKANYGHMQGKGGRVLKRLVREFADGHRNVT 133
           WLKALGDAACDYLESKSCDEVKANYGHMQGKGGRVLKRLVREFADGHRNVT
Sbjct: 67  WLKALGDAACDYLESKSCDEVKANYGHMQGKGGRVLKRLVREFADGHRNVT 117

[Close]

BLAST of CSPI03G20100 vs. ExPASy TrEMBL
Match: A0A6J1J969 (transportin-3 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111482450 PE=4 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 3.6e-54
Identity = 102/111 (91.89%), Postives = 109/111 (98.20%), Query Frame = 0


Query: 21   TQVHKCATILQQLAAICSVSERTDLKPILRWESLHGWLLSAVQALPLEYLKPGEVESLVP 80
            ++VHKCAT+LQQLAAICSVSERTDLK +LRWESLHGWLLSAVQALPLEYLKPGEVE+LVP
Sbjct: 903  SRVHKCATVLQQLAAICSVSERTDLKAVLRWESLHGWLLSAVQALPLEYLKPGEVETLVP 962

Query: 81   LWLKALGDAACDYLESKSCDEVKANYGHMQGKGGRVLKRLVREFADGHRNV 132
            LWLKALGDAACDYLESKSCDE+K NYGHMQGKGGRVLKRLVREFADGHRN+
Sbjct: 963  LWLKALGDAACDYLESKSCDELKTNYGHMQGKGGRVLKRLVREFADGHRNI 1013

[Close]

BLAST of CSPI03G20100 vs. ExPASy TrEMBL
Match: A0A6J1F1T5 (transportin-3 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111441617 PE=4 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 3.6e-54
Identity = 102/111 (91.89%), Postives = 109/111 (98.20%), Query Frame = 0


Query: 21   TQVHKCATILQQLAAICSVSERTDLKPILRWESLHGWLLSAVQALPLEYLKPGEVESLVP 80
            ++VHKCAT+LQQLAAICSVSERTDLK +LRWESLHGWLLSAVQALPLEYLKPGEVE+LVP
Sbjct: 903  SRVHKCATVLQQLAAICSVSERTDLKAVLRWESLHGWLLSAVQALPLEYLKPGEVETLVP 962

Query: 81   LWLKALGDAACDYLESKSCDEVKANYGHMQGKGGRVLKRLVREFADGHRNV 132
            LWLKALGDAACDYLESKSCDE+K NYGHMQGKGGRVLKRLVREFADGHRN+
Sbjct: 963  LWLKALGDAACDYLESKSCDELKTNYGHMQGKGGRVLKRLVREFADGHRNI 1013

[Close]

BLAST of CSPI03G20100 vs. ExPASy TrEMBL
Match: A0A6J1J0X3 (transportin-3 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111482450 PE=4 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 3.6e-54
Identity = 102/111 (91.89%), Postives = 109/111 (98.20%), Query Frame = 0


Query: 21  TQVHKCATILQQLAAICSVSERTDLKPILRWESLHGWLLSAVQALPLEYLKPGEVESLVP 80
           ++VHKCAT+LQQLAAICSVSERTDLK +LRWESLHGWLLSAVQALPLEYLKPGEVE+LVP
Sbjct: 876 SRVHKCATVLQQLAAICSVSERTDLKAVLRWESLHGWLLSAVQALPLEYLKPGEVETLVP 935

Query: 81  LWLKALGDAACDYLESKSCDEVKANYGHMQGKGGRVLKRLVREFADGHRNV 132
           LWLKALGDAACDYLESKSCDE+K NYGHMQGKGGRVLKRLVREFADGHRN+
Sbjct: 936 LWLKALGDAACDYLESKSCDELKTNYGHMQGKGGRVLKRLVREFADGHRNI 986

[Close]

BLAST of CSPI03G20100 vs. ExPASy TrEMBL
Match: A0A6J1F7N6 (transportin-3 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111441617 PE=4 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 3.6e-54
Identity = 102/111 (91.89%), Postives = 109/111 (98.20%), Query Frame = 0


Query: 21  TQVHKCATILQQLAAICSVSERTDLKPILRWESLHGWLLSAVQALPLEYLKPGEVESLVP 80
           ++VHKCAT+LQQLAAICSVSERTDLK +LRWESLHGWLLSAVQALPLEYLKPGEVE+LVP
Sbjct: 876 SRVHKCATVLQQLAAICSVSERTDLKAVLRWESLHGWLLSAVQALPLEYLKPGEVETLVP 935

Query: 81  LWLKALGDAACDYLESKSCDEVKANYGHMQGKGGRVLKRLVREFADGHRNV 132
           LWLKALGDAACDYLESKSCDE+K NYGHMQGKGGRVLKRLVREFADGHRN+
Sbjct: 936 LWLKALGDAACDYLESKSCDELKTNYGHMQGKGGRVLKRLVREFADGHRNI 986

[Close]

BLAST of CSPI03G20100 vs. NCBI nr
Match: XP_011651344.1 (transportin-3 isoform X3 [Cucumis sativus] >XP_031739064.1 transportin-3 isoform X3 [Cucumis sativus])

HSP 1 Score: 231.1 bits (588), Expect = 5.6e-57
Identity = 110/112 (98.21%), Postives = 112/112 (100.00%), Query Frame = 0


Query: 21  TQVHKCATILQQLAAICSVSERTDLKPILRWESLHGWLLSAVQALPLEYLKPGEVESLVP 80
           ++VHKCATILQQLAAICSVSERTDLKPILRWESLHGWLLSAVQALPLEYLKPGEVESLVP
Sbjct: 748 SRVHKCATILQQLAAICSVSERTDLKPILRWESLHGWLLSAVQALPLEYLKPGEVESLVP 807

Query: 81  LWLKALGDAACDYLESKSCDEVKANYGHMQGKGGRVLKRLVREFADGHRNVT 133
           LWLKALGDAACDYLESKSCDEVKANYGHMQGKGGRVLKRLVREFADGHRNVT
Sbjct: 808 LWLKALGDAACDYLESKSCDEVKANYGHMQGKGGRVLKRLVREFADGHRNVT 859

[Close]

BLAST of CSPI03G20100 vs. NCBI nr
Match: XP_011651341.1 (transportin-3 isoform X1 [Cucumis sativus] >KAE8650561.1 hypothetical protein Csa_009564 [Cucumis sativus])

HSP 1 Score: 231.1 bits (588), Expect = 5.6e-57
Identity = 110/112 (98.21%), Postives = 112/112 (100.00%), Query Frame = 0


Query: 21   TQVHKCATILQQLAAICSVSERTDLKPILRWESLHGWLLSAVQALPLEYLKPGEVESLVP 80
            ++VHKCATILQQLAAICSVSERTDLKPILRWESLHGWLLSAVQALPLEYLKPGEVESLVP
Sbjct: 902  SRVHKCATILQQLAAICSVSERTDLKPILRWESLHGWLLSAVQALPLEYLKPGEVESLVP 961

Query: 81   LWLKALGDAACDYLESKSCDEVKANYGHMQGKGGRVLKRLVREFADGHRNVT 133
            LWLKALGDAACDYLESKSCDEVKANYGHMQGKGGRVLKRLVREFADGHRNVT
Sbjct: 962  LWLKALGDAACDYLESKSCDEVKANYGHMQGKGGRVLKRLVREFADGHRNVT 1013

[Close]

BLAST of CSPI03G20100 vs. NCBI nr
Match: XP_031739063.1 (transportin MOS14 isoform X2 [Cucumis sativus])

HSP 1 Score: 231.1 bits (588), Expect = 5.6e-57
Identity = 110/112 (98.21%), Postives = 112/112 (100.00%), Query Frame = 0


Query: 21  TQVHKCATILQQLAAICSVSERTDLKPILRWESLHGWLLSAVQALPLEYLKPGEVESLVP 80
           ++VHKCATILQQLAAICSVSERTDLKPILRWESLHGWLLSAVQALPLEYLKPGEVESLVP
Sbjct: 852 SRVHKCATILQQLAAICSVSERTDLKPILRWESLHGWLLSAVQALPLEYLKPGEVESLVP 911

Query: 81  LWLKALGDAACDYLESKSCDEVKANYGHMQGKGGRVLKRLVREFADGHRNVT 133
           LWLKALGDAACDYLESKSCDEVKANYGHMQGKGGRVLKRLVREFADGHRNVT
Sbjct: 912 LWLKALGDAACDYLESKSCDEVKANYGHMQGKGGRVLKRLVREFADGHRNVT 963

[Close]

BLAST of CSPI03G20100 vs. NCBI nr
Match: XP_022983999.1 (transportin-3 isoform X1 [Cucurbita maxima] >XP_022984001.1 transportin-3 isoform X1 [Cucurbita maxima])

HSP 1 Score: 220.7 bits (561), Expect = 7.5e-54
Identity = 102/111 (91.89%), Postives = 109/111 (98.20%), Query Frame = 0


Query: 21   TQVHKCATILQQLAAICSVSERTDLKPILRWESLHGWLLSAVQALPLEYLKPGEVESLVP 80
            ++VHKCAT+LQQLAAICSVSERTDLK +LRWESLHGWLLSAVQALPLEYLKPGEVE+LVP
Sbjct: 903  SRVHKCATVLQQLAAICSVSERTDLKAVLRWESLHGWLLSAVQALPLEYLKPGEVETLVP 962

Query: 81   LWLKALGDAACDYLESKSCDEVKANYGHMQGKGGRVLKRLVREFADGHRNV 132
            LWLKALGDAACDYLESKSCDE+K NYGHMQGKGGRVLKRLVREFADGHRN+
Sbjct: 963  LWLKALGDAACDYLESKSCDELKTNYGHMQGKGGRVLKRLVREFADGHRNI 1013

[Close]

BLAST of CSPI03G20100 vs. NCBI nr
Match: XP_023526726.1 (transportin-3 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 220.7 bits (561), Expect = 7.5e-54
Identity = 102/111 (91.89%), Postives = 109/111 (98.20%), Query Frame = 0


Query: 21   TQVHKCATILQQLAAICSVSERTDLKPILRWESLHGWLLSAVQALPLEYLKPGEVESLVP 80
            ++VHKCAT+LQQLAAICSVSERTDLK +LRWESLHGWLLSAVQALPLEYLKPGEVE+LVP
Sbjct: 903  SRVHKCATVLQQLAAICSVSERTDLKAVLRWESLHGWLLSAVQALPLEYLKPGEVETLVP 962

Query: 81   LWLKALGDAACDYLESKSCDEVKANYGHMQGKGGRVLKRLVREFADGHRNV 132
            LWLKALGDAACDYLESKSCDE+K NYGHMQGKGGRVLKRLVREFADGHRN+
Sbjct: 963  LWLKALGDAACDYLESKSCDELKTNYGHMQGKGGRVLKRLVREFADGHRNI 1013

[Close]

BLAST of CSPI03G20100 vs. TAIR 10
Match: AT1G12930.1 (ARM repeat superfamily protein )

HSP 1 Score: 144.8 bits (364), Expect = 4.9e-35
Identity = 73/112 (65.18%), Postives = 86/112 (76.79%), Query Frame = 0


Query: 21  TQVHKCATILQQLAAICSVSERTDLKPILRWESLHGWLLSAVQALPLEYLKPGEVESLVP 80
           ++VHKC+TILQQLAAICS+ ERT  K +L W+SL GWL SAV ALP EYLK GE ES+V 
Sbjct: 887 SRVHKCSTILQQLAAICSLCERTSWKGMLCWKSLQGWLNSAVWALPSEYLKQGEAESIVR 946

Query: 81  LWLKALGDAACDYLESKSCD--EVKANYGHMQGKGGRVLKRLVREFADGHRN 131
            W +ALG A  DYLE+KSC+     ++ GHMQGK GR LKRLVR+FAD HRN
Sbjct: 947 EWSEALGGAGIDYLENKSCNFGSNNSSGGHMQGKHGRTLKRLVRDFADSHRN 998

The following BLAST results are available for this feature:

BLAST of CSPI03G20100 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI03G20100 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L9N1	2.7e-57	99.10	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G253510 PE=4 SV=1	[more]
A0A6J1J969	3.6e-54	91.89	transportin-3 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111482450 PE=4 SV=1	[more]
A0A6J1F1T5	3.6e-54	91.89	transportin-3 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111441617 PE=4 SV=1	[more]
A0A6J1J0X3	3.6e-54	91.89	transportin-3 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111482450 PE=4 SV=1	[more]
A0A6J1F7N6	3.6e-54	91.89	transportin-3 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111441617 PE=4 SV=1	[more]

BLAST of CSPI03G20100 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011651344.1	5.6e-57	98.21	transportin-3 isoform X3 [Cucumis sativus] >XP_031739064.1 transportin-3 isoform...	[more]
XP_011651341.1	5.6e-57	98.21	transportin-3 isoform X1 [Cucumis sativus] >KAE8650561.1 hypothetical protein Cs...	[more]
XP_031739063.1	5.6e-57	98.21	transportin MOS14 isoform X2 [Cucumis sativus]	[more]
XP_022983999.1	7.5e-54	91.89	transportin-3 isoform X1 [Cucurbita maxima] >XP_022984001.1 transportin-3 isofor...	[more]
XP_023526726.1	7.5e-54	91.89	transportin-3 isoform X1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CSPI03G20100 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G12930.1	4.9e-35	65.18	ARM repeat superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR12363:SF44	ARM REPEAT SUPERFAMILY PROTEIN	coord: 21..131
None	No IPR available	PANTHER	PTHR12363	TRANSPORTIN 3 AND IMPORTIN 13	coord: 21..131

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G20100.1	CSPI03G20100.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding