CSPI03G19610 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI03G19610
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	RNA-binding protein 2-like isoform X2
Location	Chr3: 15373938 .. 15378129 (-)
RNA-Seq Expression	CSPI03G19610
Synteny	CSPI03G19610

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCGCAAGGGAAAAAAAAACAATTTCTAAAGTATTATTCATAAGCTTCATACCCAAATTATTGAATTTGATATACAAAATTATAAGACAGAGGAGGCGGCAGTGTTGGATTATGTTGTGATGTGTGTTGTTGTTATGAACTTTGCAAGAAATCGTGAGAGAAAAGAAAATTATATATTATAGATATCATAGATCGTCCCCTCAAATTGTAATCAAAATTCACCCAACCGAACTCACCTACGTTCCACATTGTAGCCAGTCCCTGTTTCATCCTAAAATTCATCGCCTTTTTTGTAGGAGTATGTCGGACGCTTATTGGAGGTATACCGACTCTCAGCAGCAGCCTCCGTCCTCGGTTCCGCCCGTCATCGGCAAGCGCCCTCGCGTCGATTACGGTATACCCCTCTTTTTTTCCCCCCCGTTTTGTTTCCTACATTTGGAATTAGGGTTTTCTTAAGGTGACTGAATTTGAGGATTTTCTTGAATCCCCAGTTGCTGAATTGTACAATCTTTGGTTTTTACCAACTCTTAGGGTTAGATGGGATTGTTAGAAAACCGTAGTCTTTTGAGATGGGTTTACTTTTTATGTCTTGTCTTCATCCTTTAACTGTTGATTTGTTTGGAAATTCTCAGAATGGTTCTTTGTGTATTGTTATACACCACCCCTCTTCGTCGTTTAGTGTGATTTGTGTATGATGCTTTAATCCTTCAGCATATTTTCTTGCTCCGTATATCGAAATTTTACTGATTTGCTGATCACGTTTTGTGGAACATAGGATCTCCTGAAGTCAAATAGCCAAACTTATTGGTTTTCAGGAGTCTTAGGATTCCAATGGCCAGTGGGTGTTCCTAATGCGATTTTTTTTGAAGTTATCCGTTTTTATATAATTGAGTTCTTGCTTGTGGCTTTTTGGTTTTAAGGCTTCAGAAATATGCCACAAAAGGAATGCGTATTTATCAACAATTTCAATTTTGTGGTTTCTATACGGAGTGCAACACTTTTTAAGTATCTTTCCAGAAATGAACCAATTCATAAAATCTTGAAGTTAAAATGGTGGACTTTTGATCTTCATAACTGAAAGTTTAGTATATTAATGTTCACGTGATTTTTGTGGCTTCTTGAATTAGTAGTTTTACCTTTTTAAGTTATGATTTCCCGTTGATTGAAGTGAGGTAATTCTTTGTGAACCTCCTTTGTAATCACTTGTTTCATTTTCTTTTATTTATTTGGCACATAATTCATGTTCAATGGCTTGTAGATACCTCTGGTCTTCACGAGCTGCCCAACTATTATCCTCGTCAAGATGATAGGCCTGTTCTCCAAGGAATTAAAAGTGTTGACTCTATCAATGAGTCCTATGAACGTTACCTACGCACCTCGGTACTTGTTTCATTTTGAAGGTTCAATTCTGTTTTCTATATGTTTTCTCATTCAAGTTCATTCTAATCAACCAGGCAACCTTTTTTTTTTCCAGCAAATTTCATCTTATGGTGGACAGTCTGCTAGACCTGTTGGTGGGGGCGTTCCTGGTCATCCGATGAATGATCCACCCATCTTGGGGCTTGGGGGGGTGGTTTCAGGGGCAAATGTTAATGATAGAAGTACGAGCTTTGGAGGTGGGAGGCCTAATATGCCCCTGCCACCTGATGCTTCTAATACACTATTTGTGGAAGGCTTGCCTTCCAGCTGTACCCGGCGTGAAGTAGCTCGTATCCTTTAAAAATTTTCCCATTTCCCATCCTTGTATTGTTAAAGGAATTCTTATATTGTAATCTTGTCTCCTTCACATCCACCTATAGACATATTTCGTCCTTTTGTTGGCTACAAAGAAGTGAGACTTGTTAACAAGGAATCCAGAAGTGTAAGTTGACTTGTTCAAGTTCATAAACTTTGTTTACATTCAATATGGGACACCATTAACTAAAAAGTGGATTTTCTTTACCTAATTTGTGCAGGCTGGAAGAGATCCAGTGGTGCTTGGTTTTGTAGATTTTGTGAGTCCTGCCCATGCAGCCACGGCCATGGATGCCTTACAAGGTGTGCTTGCATCTGCTTTAATCATTAATTTCTCTGCCCTTGTTTTCTGGCTGTTAAACATTTGCATTTTTTTTTGTCTCCTGACAGAGGTCACTATTGGAGAATTTGTGCCTTCAATTTATATATTTATTTTGGCTTGTCTTGACGGAAAAGTTGTCTACTCATCTTCCTTTTGCGTAATTCGTGATGTCCTTCTTTTCGTGTCTTTACCCAAACATGGGTAAATCTCTCTTTATATGTCTTTATTAGTTGTTTGAGATAGTTAAGTCAAAAGTAAAAAACAAAATGCAGGGTAGCTGAACAGCAGTGTGGAATCAGTTCATTTTTAGTTAGTACAACTCAACCTCCTTCATTACTCATGCAGCCACACGCCGAATATGGAAATAAAGGTGCGACTGCATGAGCACATACGATTCAACAATGTAATTGGTAGATATTTTTTGTAGGAGCTAAGGAAGCTAGGCTGTTTTGTTGGGCTTGTTAAAGGGTATAGGCATTATTATTGGCATTTGACTATTAATCTCGCTCTAGTTTCCTGCCATATTGAATATGAGATTAAGTTGAAAGCTCCAGTTTTAAAAGAGTGGTGTACAGGGAAACAATTCATAGGTTACGTATCCTTTTATCGACATCAATAACAGTATTGATGTCAAATGGGAAATTTATCTAAAGTGGCTGCCACATTTCATATTGGGTGCTTGGTTAAAACACGTCTTTTAATCTCATGCATTTGACAGTTCATATAACATATGTGACGGCCATATTAAATCATCCCTTCATTGTTGGGGATGTATTTCTCATGTGTATTGTATGGCTCTCTCCTCTCCAAGGTGGGATTGTGTTTGCATGTGTATCATAACTCATAGGGCTCTTAGATTCCAAGTTGTGTGGCTTGAAGAATTTGAGTTTCGATCCTATCCTGCATTCGGCCAGTAGGAAATCTGGTTAGTTGTGTACTTGGTGTCATAGATTATTCAGTCCAGTACCTCATGTTTAATTTCAGTTCAGCAGATGTGAAGCTTATTACATTTAAGGTGGATTGGTTTCGAAGTTTAGCTATTGTCTTGATTCGCACGGGGTTGCGGGTTCTGGTAATGATAAATTTTGTTTAATAGTTTTATTTGATTATTATCTCTATGGTCTTTTGATCGAACATTCTACATCCGTAATCTTAGCGTCAAAATGTTTACTTGGATTGGGGTTCGTGCGCATCAATTGTTAGAAAGATTAAATCATGATTGCTGAACTCAACCATGAGATCATACGTCCAAGCGTGTAATAAAGTCCTTTGTGATATGCCCTTTTGAATTACGTAGTAGAGTTGATTATAATAAATCATAAAGGTGAATATTAGACTATTTATGATTCAAATCATTTTACACGACTTGCATTCGATATCTGTTCTTTCCCTACCTCGTCGTTCTACACGTAGCTACTAGATATATTAGTCAGAGCTCGATTTTGCAGGTTATAAATTCGATGAGTTTGACCGCGACTCGGTCAATTTAAGGTTGCAATTTGCTCGCTTTCCTGGTGCAAGGTCAGGTGGCGGGCATCGTGGAAAGCGTTGAATTATGCGATTTCACAGGTGATAAAAAATGCCCTCTTCAACCCACTCGACCAATTATTTTCTTTGCCACATGGTAAACTCCAACGAAAAGTTCATTTGAACGCTGAATCACGCTAAATCGTGGACGAATCTTGTGTAGGATTTGCGCATACGGTGAAGTAATGAATTTGAGGCAATGTGACAGTCGGATATCAAAAACTGGAGCGTATTAGTTAGGGCCGACCAAATTCGTAAACACTAATTTGTGATGAAATCTGGTGATTTGGAGCGTTCTTTTATGTTTACAATCTCACTGTTTTTATACGTCTTGCTATGAACGTGTTGTTGAGCTGTGCTGTGGGATAAATTTTTCATTTGCTCATTATTTTCGGCTAGCGAGAATTTTGATCCGACAATATCCAGACGTGAGTTTTGGGGTTAAAAAAAGGTATATTATAAGATTAATATTTCATTGTTGTGTTTACTTCAGTTTTAAATTTATAACTATGTTCCGAAGTTGTGCATGTTATTTGAGAAGAGTTTTGTTAACTGCGATGTGGAAAAAGACCAAATTCTTCCTATATCGGCATGGTAAGAAAACTTATTT

mRNA sequence

GCGCAAGGGAAAAAAAAACAATTTCTAAAGTATTATTCATAAGCTTCATACCCAAATTATTGAATTTGATATACAAAATTATAAGACAGAGGAGGCGGCAGTGTTGGATTATGTTGTGATGTGTGTTGTTGTTATGAACTTTGCAAGAAATCGTGAGAGAAAAGAAAATTATATATTATAGATATCATAGATCGTCCCCTCAAATTGTAATCAAAATTCACCCAACCGAACTCACCTACGTTCCACATTGTAGCCAGTCCCTGTTTCATCCTAAAATTCATCGCCTTTTTTGTAGGAGTATGTCGGACGCTTATTGGAGGTATACCGACTCTCAGCAGCAGCCTCCGTCCTCGGTTCCGCCCGTCATCGGCAAGCGCCCTCGCGTCGATTACGATACCTCTGGTCTTCACGAGCTGCCCAACTATTATCCTCGTCAAGATGATAGGCCTGTTCTCCAAGGAATTAAAAGTGTTGACTCTATCAATGAGTCCTATGAACGTTACCTACGCACCTCGCAAATTTCATCTTATGGTGGACAGTCTGCTAGACCTGTTGGTGGGGGCGTTCCTGGTCATCCGATGAATGATCCACCCATCTTGGGGCTTGGGGGGGTGGTTTCAGGGGCAAATGTTAATGATAGAAGTACGAGCTTTGGAGGTGGGAGGCCTAATATGCCCCTGCCACCTGATGCTTCTAATACACTATTTGTGGAAGGCTTGCCTTCCAGCTGTACCCGGCGTGAAGTAGCTCACATATTTCGTCCTTTTGTTGGCTACAAAGAAGTGAGACTTGTTAACAAGGAATCCAGAAGTGCTGGAAGAGATCCAGTGGTGCTTGGTTTTGTAGATTTTGTGAGTCCTGCCCATGCAGCCACGGCCATGGATGCCTTACAAGGTTATAAATTCGATGAGTTTGACCGCGACTCGGTCAATTTAAGGTTGCAATTTGCTCGCTTTCCTGGTGCAAGGTCAGGTGGCGGGCATCGTGGAAAGCGTTGAATTATGCGATTTCACAGGATTTGCGCATACGGTGAAGTAATGAATTTGAGGCAATGTGACAGTCGGATATCAAAAACTGGAGCGTATTAGTTAGGGCCGACCAAATTCGTAAACACTAATTTGTGATGAAATCTGGTGATTTGGAGCGTTCTTTTATGTTTACAATCTCACTGTTTTTATACGTCTTGCTATGAACGTGTTGTTGAGCTGTGCTGTGGGATAAATTTTTCATTTGCTCATTATTTTCGGCTAGCGAGAATTTTGATCCGACAATATCCAGACGTGAGTTTTGGGGTTAAAAAAAGGTATATTATAAGATTAATATTTCATTGTTGTGTTTACTTCAGTTTTAAATTTATAACTATGTTCCGAAGTTGTGCATGTTATTTGAGAAGAGTTTTGTTAACTGCGATGTGGAAAAAGACCAAATTCTTCCTATATCGGCATGGTAAGAAAACTTATTT

Coding sequence (CDS)

ATGTCGGACGCTTATTGGAGGTATACCGACTCTCAGCAGCAGCCTCCGTCCTCGGTTCCGCCCGTCATCGGCAAGCGCCCTCGCGTCGATTACGATACCTCTGGTCTTCACGAGCTGCCCAACTATTATCCTCGTCAAGATGATAGGCCTGTTCTCCAAGGAATTAAAAGTGTTGACTCTATCAATGAGTCCTATGAACGTTACCTACGCACCTCGCAAATTTCATCTTATGGTGGACAGTCTGCTAGACCTGTTGGTGGGGGCGTTCCTGGTCATCCGATGAATGATCCACCCATCTTGGGGCTTGGGGGGGTGGTTTCAGGGGCAAATGTTAATGATAGAAGTACGAGCTTTGGAGGTGGGAGGCCTAATATGCCCCTGCCACCTGATGCTTCTAATACACTATTTGTGGAAGGCTTGCCTTCCAGCTGTACCCGGCGTGAAGTAGCTCACATATTTCGTCCTTTTGTTGGCTACAAAGAAGTGAGACTTGTTAACAAGGAATCCAGAAGTGCTGGAAGAGATCCAGTGGTGCTTGGTTTTGTAGATTTTGTGAGTCCTGCCCATGCAGCCACGGCCATGGATGCCTTACAAGGTTATAAATTCGATGAGTTTGACCGCGACTCGGTCAATTTAAGGTTGCAATTTGCTCGCTTTCCTGGTGCAAGGTCAGGTGGCGGGCATCGTGGAAAGCGTTGA

Protein sequence

MSDAYWRYTDSQQQPPSSVPPVIGKRPRVDYDTSGLHELPNYYPRQDDRPVLQGIKSVDSINESYERYLRTSQISSYGGQSARPVGGGVPGHPMNDPPILGLGGVVSGANVNDRSTSFGGGRPNMPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPVVLGFVDFVSPAHAATAMDALQGYKFDEFDRDSVNLRLQFARFPGARSGGGHRGKR*

Homology

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BLAST of CSPI03G19610 vs. ExPASy Swiss-Prot
Match: G7ID19 (RNA-binding protein 2 OS=Medicago truncatula OX=3880 GN=RBP2 PE=2 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 2.7e-49
Identity = 119/259 (45.95%), Postives = 159/259 (61.39%), Query Frame = 0


Query: 1   MSDAYWRYTDSQQQPPSSVPPVIGKRPRVDYDT--SGL---HELPNYYPRQDDRPVLQGI 60
           M+D +W        PP  +     KRPR +YDT  SG+   +E+ NY  + +   +L   
Sbjct: 1   MADGFWNRQQQHLPPPGGML----KRPRTEYDTAPSGVTSGNEVHNYIAQNNGHQMLNDT 60

Query: 61  KSVDSINESYERYLRTSQISSYGGQSARPVG--------GGVPGHPMNDPPILG-LGGVV 120
           K + S   +Y+R+L+++ ++S+    A  +G        G +PGH + DP  +G L GV 
Sbjct: 61  KILGS---AYDRFLQSAGLTSFNSGEASVIGGVGFARGVGELPGHSLGDPSAMGHLSGVG 120

Query: 121 SGANV--NDRSTSFGG----------GRPNMPLPPDASNTLFVEGLPSSCTRREVAHIFR 180
            G ++  N R  +FGG          G   +PLP DAS+TL+VEGLPS  T+REVAHIFR
Sbjct: 121 GGPDLSRNGRDVNFGGQLPIDAVSRPGPETIPLPRDASSTLYVEGLPSDSTKREVAHIFR 180

Query: 181 PFVGYKEVRLVNKESRSAGRDPVVLGFVDFVSPAHAATAMDALQGYKFDEFDRDSVNLRL 233
           PFVGY+EVRLV KES+  G DP++L FVDF +PA AATA+ ALQGYK DE + +S  LRL
Sbjct: 181 PFVGYREVRLVAKESKHRGGDPLILCFVDFANPACAATALSALQGYKVDEINPESSYLRL 240

[Close]

BLAST of CSPI03G19610 vs. ExPASy Swiss-Prot
Match: Q8H0P8 (RNA-binding protein 1 OS=Medicago truncatula OX=3880 GN=RBP1 PE=2 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 2.1e-46
Identity = 120/256 (46.88%), Postives = 158/256 (61.72%), Query Frame = 0


Query: 1   MSDAYWRYTDSQQQPPSSVPPVIG--KRPRVDYD--TSGL---HELPNYYPRQDDRPVLQ 60
           M+D YW    ++QQ   S+ P  G  KRPR DY+   SGL   +E+ +Y  R++DR    
Sbjct: 1   MADGYW----NRQQ---SLLPHSGLHKRPRPDYEMPASGLPSGNEM-HYLSREEDRSGHP 60

Query: 61  GIKSVDSINESYERYLRTSQISSYGGQSARPVG--------GGVPGHPMNDPPIL--GLG 120
            +K   +I  +Y+RYL+  Q+ S+    A  VG        GG+P H ++DP  +    G
Sbjct: 61  MVKDSKTIGSAYDRYLQ-GQVPSFTSGEASTVGALGLQRGIGGLPNHSLSDPSAMIGRHG 120

Query: 121 GVVSGANVNDRSTSFGGGRPNMP----------LPPDASNTLFVEGLPSSCTRREVAHIF 180
           G       N R  ++G   P  P          LPPDAS TL++EGLPS CTRREVAHIF
Sbjct: 121 GGGPDLAPNGRGMNYGFQPPMDPVSRHGPEPALLPPDASPTLYIEGLPSDCTRREVAHIF 180

Query: 181 RPFVGYKEVRLVNKESRSAGRDPVVLGFVDFVSPAHAATAMDALQGYKFDEFDRDSVNLR 230
           RPFVGY+EVRLV+KE++  G DP++L FVDF +PA AATA+ ALQGYK DE + +S +LR
Sbjct: 181 RPFVGYREVRLVSKEAKHRG-DPLILCFVDFANPACAATALSALQGYKVDEINPESSHLR 240

[Close]

BLAST of CSPI03G19610 vs. ExPASy Swiss-Prot
Match: A1A6K6 (Nuclear speckle RNA-binding protein A OS=Arabidopsis thaliana OX=3702 GN=NSRA PE=2 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 2.9e-43
Identity = 113/243 (46.50%), Postives = 141/243 (58.02%), Query Frame = 0


Query: 1   MSDAYWRYTDSQQQPPSSVPPVIGKRPRVDYD----TSGLHELPNYYPRQDDRPVLQGIK 60
           M+D YW     Q  PP    P+  KRPR D++    T  +     YYPR +D  V     
Sbjct: 1   MADGYWNQQRQQHHPPGG--PM--KRPRSDFEAPSSTMTIGHGGGYYPRDEDLDV----P 60

Query: 61  SVDSINESYERYLRTSQISSYGGQSARPVGGGVPGHPMN----DPPILGLGGVVS-GANV 120
              +I  +Y+RYL++ Q    G  S    GGG  G   N    D  +L  GGV+      
Sbjct: 61  DTRTIGSAYDRYLQSVQSGEGGSVSMGRSGGGGGGGGGNVQTIDDFMLRRGGVLPLDHGP 120

Query: 121 NDRSTSFGGGRP--NMPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKES 180
           N  +  F    P     LP DASNTL+VEGLPS+C+RREVAHIFRPFVGY+EVRLV K+S
Sbjct: 121 NGHTIGFDPPEPVGRRNLPSDASNTLYVEGLPSNCSRREVAHIFRPFVGYREVRLVTKDS 180

Query: 181 RSAGRDPVVLGFVDFVSPAHAATAMDALQGYKFDEFDRDSVNLRLQFARFPGARSGGGHR 233
           +    DP+VL FVDF +PA AATA+ ALQGY+ DE + DS  LRLQF+R PG+R   G R
Sbjct: 181 KHRNGDPIVLCFVDFTNPACAATALSALQGYRMDENESDSKFLRLQFSRKPGSRP--GQR 233

[Close]

BLAST of CSPI03G19610 vs. ExPASy Swiss-Prot
Match: F4HWF9 (Nuclear speckle RNA-binding protein B OS=Arabidopsis thaliana OX=3702 GN=NSRB PE=2 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 8.1e-38
Identity = 96/212 (45.28%), Postives = 124/212 (58.49%), Query Frame = 0


Query: 38  ELPNYYPRQDDRPVLQGIKSVDSINESYERYLRTSQISSYGGQSARPVGG---------- 97
           ++ +Y  + +DR +   +K   SI  +Y+RYL++ Q      + A P  G          
Sbjct: 211 DMHSYLSQDEDRGIPHSVKDTRSIGSAYDRYLQSMQTFFVPSEEAGPFNGVGMVRQGGSN 270

Query: 98  GVPGHPMNDPPILGLGG-VVSGANVNDRSTSFG-------GGRPNMPLPPDASNTLFVEG 157
            +PG  M +  + G GG + S    N R   FG        GR   PLPPD SNTL+VEG
Sbjct: 271 MMPGPSMGE-LMAGCGGSLPSDFRPNGRDMGFGQLDSVGRPGREPHPLPPDVSNTLYVEG 330

Query: 158 LPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPVVLGFVDFVSPAHAATAMDALQG 217
           LPS+C+RREV+HIFRPFVGY+EVRLV ++S+    DP VL FVDF + A AATA+ ALQ 
Sbjct: 331 LPSNCSRREVSHIFRPFVGYREVRLVTQDSKHRSGDPTVLCFVDFENSACAATALSALQD 390

Query: 218 YKFDEFDRDSVNLRLQFARFPGARSG--GGHR 230
           Y+ DE + DS  LRLQF R PG R G  GG R
Sbjct: 391 YRMDEDEPDSKILRLQFFRNPGPRPGQRGGRR 421

[Close]

BLAST of CSPI03G19610 vs. ExPASy Swiss-Prot
Match: Q6JB11 (Protein MATERNALLY EXPRESSED GENE 5 OS=Zea mays OX=4577 GN=MEG5 PE=2 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 1.2e-28
Identity = 59/85 (69.41%), Postives = 72/85 (84.71%), Query Frame = 0


Query: 120 GGRPNMPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPVVL 179
           GGRP  PLPPDAS+TL++EGLP++CTRREV+HIFRPFVG++EVRLVNKESR  G DP VL
Sbjct: 25  GGRPEPPLPPDASSTLYIEGLPANCTRREVSHIFRPFVGFREVRLVNKESRHPGGDPHVL 84

Query: 180 GFVDFVSPAHAATAMDALQGYKFDE 205
            FVDF +PA A  A++ALQG+  D+
Sbjct: 85  CFVDFDNPAQATIALEALQGHVTDD 109

[Close]

BLAST of CSPI03G19610 vs. ExPASy TrEMBL
Match: A0A0A0L796 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G238140 PE=4 SV=1)

HSP 1 Score: 478.8 bits (1231), Expect = 1.3e-131
Identity = 231/232 (99.57%), Postives = 232/232 (100.00%), Query Frame = 0


Query: 1   MSDAYWRYTDSQQQPPSSVPPVIGKRPRVDYDTSGLHELPNYYPRQDDRPVLQGIKSVDS 60
           MSDAYWRYTDSQQQPPSSVPPV+GKRPRVDYDTSGLHELPNYYPRQDDRPVLQGIKSVDS
Sbjct: 1   MSDAYWRYTDSQQQPPSSVPPVVGKRPRVDYDTSGLHELPNYYPRQDDRPVLQGIKSVDS 60

Query: 61  INESYERYLRTSQISSYGGQSARPVGGGVPGHPMNDPPILGLGGVVSGANVNDRSTSFGG 120
           INESYERYLRTSQISSYGGQSARPVGGGVPGHPMNDPPILGLGGVVSGANVNDRSTSFGG
Sbjct: 61  INESYERYLRTSQISSYGGQSARPVGGGVPGHPMNDPPILGLGGVVSGANVNDRSTSFGG 120

Query: 121 GRPNMPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPVVLG 180
           GRPNMPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPVVLG
Sbjct: 121 GRPNMPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPVVLG 180

Query: 181 FVDFVSPAHAATAMDALQGYKFDEFDRDSVNLRLQFARFPGARSGGGHRGKR 233
           FVDFVSPAHAATAMDALQGYKFDEFDRDSVNLRLQFARFPGARSGGGHRGKR
Sbjct: 181 FVDFVSPAHAATAMDALQGYKFDEFDRDSVNLRLQFARFPGARSGGGHRGKR 232

[Close]

BLAST of CSPI03G19610 vs. ExPASy TrEMBL
Match: A0A1S3C3F7 (RNA-binding protein 2-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496055 PE=4 SV=1)

HSP 1 Score: 471.5 bits (1212), Expect = 2.1e-129
Identity = 227/232 (97.84%), Postives = 231/232 (99.57%), Query Frame = 0


Query: 1   MSDAYWRYTDSQQQPPSSVPPVIGKRPRVDYDTSGLHELPNYYPRQDDRPVLQGIKSVDS 60
           MSDAYWRYTDSQQQPPSSVPPV+GKRPRVDYDT+GLHELPNYYPRQDDRPVLQGIKSVDS
Sbjct: 1   MSDAYWRYTDSQQQPPSSVPPVVGKRPRVDYDTTGLHELPNYYPRQDDRPVLQGIKSVDS 60

Query: 61  INESYERYLRTSQISSYGGQSARPVGGGVPGHPMNDPPILGLGGVVSGANVNDRSTSFGG 120
           INESYERYLRTSQISSYGGQSARPVGGGVPGH MNDPPILG+GGVVSGANVNDRSTSFGG
Sbjct: 61  INESYERYLRTSQISSYGGQSARPVGGGVPGHLMNDPPILGIGGVVSGANVNDRSTSFGG 120

Query: 121 GRPNMPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPVVLG 180
           GRPN+PLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPVVLG
Sbjct: 121 GRPNIPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPVVLG 180

Query: 181 FVDFVSPAHAATAMDALQGYKFDEFDRDSVNLRLQFARFPGARSGGGHRGKR 233
           FVDFVSPAHAATAMDALQGYKFDEFDRDSVNLRLQFARFPGARSGGGHRGKR
Sbjct: 181 FVDFVSPAHAATAMDALQGYKFDEFDRDSVNLRLQFARFPGARSGGGHRGKR 232

[Close]

BLAST of CSPI03G19610 vs. ExPASy TrEMBL
Match: A0A6J1E554 (RNA-binding protein 2-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111430853 PE=4 SV=1)

HSP 1 Score: 445.3 bits (1144), Expect = 1.6e-121
Identity = 214/233 (91.85%), Postives = 226/233 (97.00%), Query Frame = 0


Query: 1   MSDAYWRYTDSQQQPPSSVPPVIGKRPRVDYDTSGLHELPNYYPRQDDRPVLQGIKSVDS 60
           MSDAYWRY+DSQQQPPSSVP V GKRPRVDYDTSG H+LP+YYPRQDDRP+LQGIKSVDS
Sbjct: 1   MSDAYWRYSDSQQQPPSSVPSVAGKRPRVDYDTSGPHDLPDYYPRQDDRPILQGIKSVDS 60

Query: 61  INESYERYLRTSQISSYGGQSARPVGGGVPGHPMND-PPILGLGGVVSGANVNDRSTSFG 120
           INESYERYLR+S+ISSYGGQSARPVGGGVPGH +ND PPI+G+GGVVSGANVNDRS SFG
Sbjct: 61  INESYERYLRSSKISSYGGQSARPVGGGVPGHSINDPPPIVGIGGVVSGANVNDRSASFG 120

Query: 121 GGRPNMPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPVVL 180
           GGRPN+PLPPDASNTLFVEGLPSSCTRRE+AHIFRPFVGYKEVRLVNKESR+ GRDPVVL
Sbjct: 121 GGRPNVPLPPDASNTLFVEGLPSSCTRREIAHIFRPFVGYKEVRLVNKESRNPGRDPVVL 180

Query: 181 GFVDFVSPAHAATAMDALQGYKFDEFDRDSVNLRLQFARFPGARSGGGHRGKR 233
           GFVDFVSPAHAATAMDALQGYKFDEFDRDSVNLRLQFARFPGARSGGGHRGKR
Sbjct: 181 GFVDFVSPAHAATAMDALQGYKFDEFDRDSVNLRLQFARFPGARSGGGHRGKR 233

[Close]

BLAST of CSPI03G19610 vs. ExPASy TrEMBL
Match: A0A6J1J2D2 (RNA-binding protein 2-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111482785 PE=4 SV=1)

HSP 1 Score: 441.0 bits (1133), Expect = 3.0e-120
Identity = 213/233 (91.42%), Postives = 224/233 (96.14%), Query Frame = 0


Query: 1   MSDAYWRYTDSQQQPPSSVPPVIGKRPRVDYDTSGLHELPNYYPRQDDRPVLQGIKSVDS 60
           MSDAYWRY+DSQQQPPSSVP V GKRPRVDYDTSG H+LPNYYPRQDDRP+LQGIKSVDS
Sbjct: 1   MSDAYWRYSDSQQQPPSSVPSVAGKRPRVDYDTSGPHDLPNYYPRQDDRPILQGIKSVDS 60

Query: 61  INESYERYLRTSQISSYGGQSARPVGGGVPGHPMND-PPILGLGGVVSGANVNDRSTSFG 120
           INESYERYLR+S+ISSYG QSARPVGGGVPGH +ND PPI+G+GGVVSGANVNDRS SFG
Sbjct: 61  INESYERYLRSSKISSYGEQSARPVGGGVPGHSINDPPPIVGIGGVVSGANVNDRSASFG 120

Query: 121 GGRPNMPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPVVL 180
           GGRPN+PLPPDASNTLFVEGLPSSCTRRE+AHIFRPFVGYKEVRLVNKESR+ GRD VVL
Sbjct: 121 GGRPNVPLPPDASNTLFVEGLPSSCTRREIAHIFRPFVGYKEVRLVNKESRNPGRDSVVL 180

Query: 181 GFVDFVSPAHAATAMDALQGYKFDEFDRDSVNLRLQFARFPGARSGGGHRGKR 233
           GFVDFVSPAHAATAMDALQGYKFDEFDRDSVNLRLQFARFPGARSGGGHRGKR
Sbjct: 181 GFVDFVSPAHAATAMDALQGYKFDEFDRDSVNLRLQFARFPGARSGGGHRGKR 233

[Close]

BLAST of CSPI03G19610 vs. ExPASy TrEMBL
Match: A0A6J1CHS7 (RNA-binding protein 2-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111011536 PE=4 SV=1)

HSP 1 Score: 426.4 bits (1095), Expect = 7.7e-116
Identity = 208/233 (89.27%), Postives = 222/233 (95.28%), Query Frame = 0


Query: 1   MSDAYWRYTDSQQQPPSSVPPVIGKRPRVDYDTSGLHELPNYYPRQDDRPVLQGIKSVDS 60
           MSDAYWRYTDSQQQPPS+   V+GKRPRVD+D++G HELP+YYPRQDDR ++QGIKSVDS
Sbjct: 10  MSDAYWRYTDSQQQPPSA---VVGKRPRVDFDSTGGHELPHYYPRQDDRAMIQGIKSVDS 69

Query: 61  INESYERYLRTSQISSY-GGQSARPVGGGVPGHPMNDPPILGLGGVVSGANVNDRSTSFG 120
           INESYERYLR+SQISSY GGQSARPV GGVPGHP+NDPPI+G+GGVVSGANVNDRS SFG
Sbjct: 70  INESYERYLRSSQISSYGGGQSARPVSGGVPGHPVNDPPIVGIGGVVSGANVNDRSASFG 129

Query: 121 GGRPNMPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPVVL 180
            GRPN+PLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESR+ GRD VVL
Sbjct: 130 VGRPNVPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRNPGRDSVVL 189

Query: 181 GFVDFVSPAHAATAMDALQGYKFDEFDRDSVNLRLQFARFPGARSGGGHRGKR 233
           GFVDFVSPAHAATAMDALQGYKFDEFDRDSVNLRLQFARFPGARSGGGHRGKR
Sbjct: 190 GFVDFVSPAHAATAMDALQGYKFDEFDRDSVNLRLQFARFPGARSGGGHRGKR 239

[Close]

BLAST of CSPI03G19610 vs. NCBI nr
Match: XP_004146235.1 (RNA-binding protein 2 isoform X2 [Cucumis sativus] >KGN57648.1 hypothetical protein Csa_011030 [Cucumis sativus])

HSP 1 Score: 478.8 bits (1231), Expect = 2.7e-131
Identity = 231/232 (99.57%), Postives = 232/232 (100.00%), Query Frame = 0


Query: 1   MSDAYWRYTDSQQQPPSSVPPVIGKRPRVDYDTSGLHELPNYYPRQDDRPVLQGIKSVDS 60
           MSDAYWRYTDSQQQPPSSVPPV+GKRPRVDYDTSGLHELPNYYPRQDDRPVLQGIKSVDS
Sbjct: 1   MSDAYWRYTDSQQQPPSSVPPVVGKRPRVDYDTSGLHELPNYYPRQDDRPVLQGIKSVDS 60

Query: 61  INESYERYLRTSQISSYGGQSARPVGGGVPGHPMNDPPILGLGGVVSGANVNDRSTSFGG 120
           INESYERYLRTSQISSYGGQSARPVGGGVPGHPMNDPPILGLGGVVSGANVNDRSTSFGG
Sbjct: 61  INESYERYLRTSQISSYGGQSARPVGGGVPGHPMNDPPILGLGGVVSGANVNDRSTSFGG 120

Query: 121 GRPNMPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPVVLG 180
           GRPNMPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPVVLG
Sbjct: 121 GRPNMPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPVVLG 180

Query: 181 FVDFVSPAHAATAMDALQGYKFDEFDRDSVNLRLQFARFPGARSGGGHRGKR 233
           FVDFVSPAHAATAMDALQGYKFDEFDRDSVNLRLQFARFPGARSGGGHRGKR
Sbjct: 181 FVDFVSPAHAATAMDALQGYKFDEFDRDSVNLRLQFARFPGARSGGGHRGKR 232

[Close]

BLAST of CSPI03G19610 vs. NCBI nr
Match: XP_008455996.1 (PREDICTED: RNA-binding protein 2-like isoform X2 [Cucumis melo])

HSP 1 Score: 471.5 bits (1212), Expect = 4.3e-129
Identity = 227/232 (97.84%), Postives = 231/232 (99.57%), Query Frame = 0


Query: 1   MSDAYWRYTDSQQQPPSSVPPVIGKRPRVDYDTSGLHELPNYYPRQDDRPVLQGIKSVDS 60
           MSDAYWRYTDSQQQPPSSVPPV+GKRPRVDYDT+GLHELPNYYPRQDDRPVLQGIKSVDS
Sbjct: 1   MSDAYWRYTDSQQQPPSSVPPVVGKRPRVDYDTTGLHELPNYYPRQDDRPVLQGIKSVDS 60

Query: 61  INESYERYLRTSQISSYGGQSARPVGGGVPGHPMNDPPILGLGGVVSGANVNDRSTSFGG 120
           INESYERYLRTSQISSYGGQSARPVGGGVPGH MNDPPILG+GGVVSGANVNDRSTSFGG
Sbjct: 61  INESYERYLRTSQISSYGGQSARPVGGGVPGHLMNDPPILGIGGVVSGANVNDRSTSFGG 120

Query: 121 GRPNMPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPVVLG 180
           GRPN+PLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPVVLG
Sbjct: 121 GRPNIPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPVVLG 180

Query: 181 FVDFVSPAHAATAMDALQGYKFDEFDRDSVNLRLQFARFPGARSGGGHRGKR 233
           FVDFVSPAHAATAMDALQGYKFDEFDRDSVNLRLQFARFPGARSGGGHRGKR
Sbjct: 181 FVDFVSPAHAATAMDALQGYKFDEFDRDSVNLRLQFARFPGARSGGGHRGKR 232

[Close]

BLAST of CSPI03G19610 vs. NCBI nr
Match: XP_038897625.1 (RNA-binding protein 2-like isoform X1 [Benincasa hispida])

HSP 1 Score: 457.2 bits (1175), Expect = 8.4e-125
Identity = 220/232 (94.83%), Postives = 227/232 (97.84%), Query Frame = 0


Query: 1   MSDAYWRYTDSQQQPPSSVPPVIGKRPRVDYDTSGLHELPNYYPRQDDRPVLQGIKSVDS 60
           MSDAYWRYTDSQQQPPSSVP V+GKRPRVDYD +GLHELPNYY RQDDRPVLQGIKSVDS
Sbjct: 1   MSDAYWRYTDSQQQPPSSVPAVVGKRPRVDYDPTGLHELPNYYHRQDDRPVLQGIKSVDS 60

Query: 61  INESYERYLRTSQISSYGGQSARPVGGGVPGHPMNDPPILGLGGVVSGANVNDRSTSFGG 120
           INESYERYLR+SQISSYGGQSARPVGGGVPGH +NDPPILG+GGVVSGANVNDRSTSFGG
Sbjct: 61  INESYERYLRSSQISSYGGQSARPVGGGVPGHSINDPPILGIGGVVSGANVNDRSTSFGG 120

Query: 121 GRPNMPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPVVLG 180
           GRPN+PLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESR+ GRDPVVLG
Sbjct: 121 GRPNIPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRNPGRDPVVLG 180

Query: 181 FVDFVSPAHAATAMDALQGYKFDEFDRDSVNLRLQFARFPGARSGGGHRGKR 233
           FVDFVSPAHAATAMDALQGYKFDEFDRDSVNLRLQFARFPGARSGGGHRGKR
Sbjct: 181 FVDFVSPAHAATAMDALQGYKFDEFDRDSVNLRLQFARFPGARSGGGHRGKR 232

[Close]

BLAST of CSPI03G19610 vs. NCBI nr
Match: XP_023553422.1 (RNA-binding protein 2-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 446.0 bits (1146), Expect = 1.9e-121
Identity = 214/233 (91.85%), Postives = 226/233 (97.00%), Query Frame = 0


Query: 1   MSDAYWRYTDSQQQPPSSVPPVIGKRPRVDYDTSGLHELPNYYPRQDDRPVLQGIKSVDS 60
           MSDAYWRY+DSQQQPPSSVP V GKRPRVDYDTSG H+LPNYYPRQDDRP+LQGIKSVDS
Sbjct: 1   MSDAYWRYSDSQQQPPSSVPSVAGKRPRVDYDTSGPHDLPNYYPRQDDRPILQGIKSVDS 60

Query: 61  INESYERYLRTSQISSYGGQSARPVGGGVPGHPMND-PPILGLGGVVSGANVNDRSTSFG 120
           INESYERYLR+++ISSYGGQSARPVGGGVPGH +ND PPI+G+GGVVSGANVNDRS SFG
Sbjct: 61  INESYERYLRSAKISSYGGQSARPVGGGVPGHSINDPPPIVGIGGVVSGANVNDRSASFG 120

Query: 121 GGRPNMPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPVVL 180
           GGRPN+PLPPDASNTLFVEGLPSSCTRRE+AHIFRPFVGYKEVRLVNKESR+ GRDPVVL
Sbjct: 121 GGRPNVPLPPDASNTLFVEGLPSSCTRREIAHIFRPFVGYKEVRLVNKESRNPGRDPVVL 180

Query: 181 GFVDFVSPAHAATAMDALQGYKFDEFDRDSVNLRLQFARFPGARSGGGHRGKR 233
           GFVDFVSPAHAATAMDALQGYKFDEFDRDSVNLRLQFARFPGARSGGGHRGKR
Sbjct: 181 GFVDFVSPAHAATAMDALQGYKFDEFDRDSVNLRLQFARFPGARSGGGHRGKR 233

[Close]

BLAST of CSPI03G19610 vs. NCBI nr
Match: XP_022923072.1 (RNA-binding protein 2-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 445.3 bits (1144), Expect = 3.3e-121
Identity = 214/233 (91.85%), Postives = 226/233 (97.00%), Query Frame = 0


Query: 1   MSDAYWRYTDSQQQPPSSVPPVIGKRPRVDYDTSGLHELPNYYPRQDDRPVLQGIKSVDS 60
           MSDAYWRY+DSQQQPPSSVP V GKRPRVDYDTSG H+LP+YYPRQDDRP+LQGIKSVDS
Sbjct: 1   MSDAYWRYSDSQQQPPSSVPSVAGKRPRVDYDTSGPHDLPDYYPRQDDRPILQGIKSVDS 60

Query: 61  INESYERYLRTSQISSYGGQSARPVGGGVPGHPMND-PPILGLGGVVSGANVNDRSTSFG 120
           INESYERYLR+S+ISSYGGQSARPVGGGVPGH +ND PPI+G+GGVVSGANVNDRS SFG
Sbjct: 61  INESYERYLRSSKISSYGGQSARPVGGGVPGHSINDPPPIVGIGGVVSGANVNDRSASFG 120

Query: 121 GGRPNMPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPVVL 180
           GGRPN+PLPPDASNTLFVEGLPSSCTRRE+AHIFRPFVGYKEVRLVNKESR+ GRDPVVL
Sbjct: 121 GGRPNVPLPPDASNTLFVEGLPSSCTRREIAHIFRPFVGYKEVRLVNKESRNPGRDPVVL 180

Query: 181 GFVDFVSPAHAATAMDALQGYKFDEFDRDSVNLRLQFARFPGARSGGGHRGKR 233
           GFVDFVSPAHAATAMDALQGYKFDEFDRDSVNLRLQFARFPGARSGGGHRGKR
Sbjct: 181 GFVDFVSPAHAATAMDALQGYKFDEFDRDSVNLRLQFARFPGARSGGGHRGKR 233

[Close]

BLAST of CSPI03G19610 vs. TAIR 10
Match: AT1G76940.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 176.8 bits (447), Expect = 2.0e-44
Identity = 113/243 (46.50%), Postives = 141/243 (58.02%), Query Frame = 0


Query: 1   MSDAYWRYTDSQQQPPSSVPPVIGKRPRVDYD----TSGLHELPNYYPRQDDRPVLQGIK 60
           M+D YW     Q  PP    P+  KRPR D++    T  +     YYPR +D  V     
Sbjct: 1   MADGYWNQQRQQHHPPGG--PM--KRPRSDFEAPSSTMTIGHGGGYYPRDEDLDV----P 60

Query: 61  SVDSINESYERYLRTSQISSYGGQSARPVGGGVPGHPMN----DPPILGLGGVVS-GANV 120
              +I  +Y+RYL++ Q    G  S    GGG  G   N    D  +L  GGV+      
Sbjct: 61  DTRTIGSAYDRYLQSVQSGEGGSVSMGRSGGGGGGGGGNVQTIDDFMLRRGGVLPLDHGP 120

Query: 121 NDRSTSFGGGRP--NMPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKES 180
           N  +  F    P     LP DASNTL+VEGLPS+C+RREVAHIFRPFVGY+EVRLV K+S
Sbjct: 121 NGHTIGFDPPEPVGRRNLPSDASNTLYVEGLPSNCSRREVAHIFRPFVGYREVRLVTKDS 180

Query: 181 RSAGRDPVVLGFVDFVSPAHAATAMDALQGYKFDEFDRDSVNLRLQFARFPGARSGGGHR 233
           +    DP+VL FVDF +PA AATA+ ALQGY+ DE + DS  LRLQF+R PG+R   G R
Sbjct: 181 KHRNGDPIVLCFVDFTNPACAATALSALQGYRMDENESDSKFLRLQFSRKPGSRP--GQR 233

[Close]

BLAST of CSPI03G19610 vs. TAIR 10
Match: AT1G21320.2 (nucleotide binding;nucleic acid binding )

HSP 1 Score: 174.5 bits (441), Expect = 1.0e-43
Identity = 111/254 (43.70%), Postives = 143/254 (56.30%), Query Frame = 0


Query: 1   MSDAYWRYTDSQQQPPSSVPPVI-GKRPRVDYDTSGL----HELPNYYPRQDDRPVLQGI 60
           M+D YW      Q P SS P V+  KRPR D+  +       ++ +Y  + +DR +   +
Sbjct: 1   MADEYWNQQRQYQLPISSNPHVLPPKRPRSDFQGTPYLIPSGDMHSYLSQDEDRGIPHSV 60

Query: 61  KSVDSINESYERYLRTSQISSYGGQSARPVGG----------GVPGHPMNDPPILGLGG- 120
           K   SI  +Y+RYL++ Q      + A P  G           +PG  M +  + G GG 
Sbjct: 61  KDTRSIGSAYDRYLQSMQTFFVPSEEAGPFNGVGMVRQGGSNMMPGPSMGE-LMAGCGGS 120

Query: 121 VVSGANVNDRSTSFG-------GGRPNMPLPPDASNTLFVEGLPSSCTRREVAHIFRPFV 180
           + S    N R   FG        GR   PLPPD SNTL+VEGLPS+C+RREV+HIFRPFV
Sbjct: 121 LPSDFRPNGRDMGFGQLDSVGRPGREPHPLPPDVSNTLYVEGLPSNCSRREVSHIFRPFV 180

Query: 181 GYKEVRLVNKESRSAGRDPVVLGFVDFVSPAHAATAMDALQGYKFDEFDRDSVNLRLQFA 230
           GY+EVRLV ++S+    DP VL FVDF + A AATA+ ALQ Y+ DE + DS  LRLQF 
Sbjct: 181 GYREVRLVTQDSKHRSGDPTVLCFVDFENSACAATALSALQDYRMDEDEPDSKILRLQFF 240

[Close]

BLAST of CSPI03G19610 vs. TAIR 10
Match: AT1G21320.1 (nucleotide binding;nucleic acid binding )

HSP 1 Score: 158.7 bits (400), Expect = 5.7e-39
Identity = 96/212 (45.28%), Postives = 124/212 (58.49%), Query Frame = 0


Query: 38  ELPNYYPRQDDRPVLQGIKSVDSINESYERYLRTSQISSYGGQSARPVGG---------- 97
           ++ +Y  + +DR +   +K   SI  +Y+RYL++ Q      + A P  G          
Sbjct: 211 DMHSYLSQDEDRGIPHSVKDTRSIGSAYDRYLQSMQTFFVPSEEAGPFNGVGMVRQGGSN 270

Query: 98  GVPGHPMNDPPILGLGG-VVSGANVNDRSTSFG-------GGRPNMPLPPDASNTLFVEG 157
            +PG  M +  + G GG + S    N R   FG        GR   PLPPD SNTL+VEG
Sbjct: 271 MMPGPSMGE-LMAGCGGSLPSDFRPNGRDMGFGQLDSVGRPGREPHPLPPDVSNTLYVEG 330

Query: 158 LPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPVVLGFVDFVSPAHAATAMDALQG 217
           LPS+C+RREV+HIFRPFVGY+EVRLV ++S+    DP VL FVDF + A AATA+ ALQ 
Sbjct: 331 LPSNCSRREVSHIFRPFVGYREVRLVTQDSKHRSGDPTVLCFVDFENSACAATALSALQD 390

Query: 218 YKFDEFDRDSVNLRLQFARFPGARSG--GGHR 230
           Y+ DE + DS  LRLQF R PG R G  GG R
Sbjct: 391 YRMDEDEPDSKILRLQFFRNPGPRPGQRGGRR 421

[Close]

BLAST of CSPI03G19610 vs. TAIR 10
Match: AT1G76940.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 145.2 bits (365), Expect = 6.6e-35
Identity = 89/165 (53.94%), Postives = 106/165 (64.24%), Query Frame = 0


Query: 78  GGQSARP---VGGGVPGHPMN----DPPILGLGGVVS-GANVNDRSTSFGGGRP--NMPL 137
           GG   RP    GGG  G   N    D  +L  GGV+      N  +  F    P     L
Sbjct: 17  GGPMKRPRSDFGGGGGGGGGNVQTIDDFMLRRGGVLPLDHGPNGHTIGFDPPEPVGRRNL 76

Query: 138 PPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPVVLGFVDFVSP 197
           P DASNTL+VEGLPS+C+RREVAHIFRPFVGY+EVRLV K+S+    DP+VL FVDF +P
Sbjct: 77  PSDASNTLYVEGLPSNCSRREVAHIFRPFVGYREVRLVTKDSKHRNGDPIVLCFVDFTNP 136

Query: 198 AHAATAMDALQGYKFDEFDRDSVNLRLQFARFPGARSGGGHRGKR 233
           A AATA+ ALQGY+ DE + DS  LRLQF+R PG+R   G RG+R
Sbjct: 137 ACAATALSALQGYRMDENESDSKFLRLQFSRKPGSRP--GQRGRR 179

[Close]

BLAST of CSPI03G19610 vs. TAIR 10
Match: AT2G47580.1 (spliceosomal protein U1A )

HSP 1 Score: 53.5 bits (127), Expect = 2.6e-07
Identity = 36/115 (31.30%), Postives = 52/115 (45.22%), Query Frame = 0


Query: 91  GHPMNDPPILGLGGVVSGANVNDRSTSFGGGRPNMP-LPPDASNTLFVEGLPSSCTRREV 150
           G PMN        GV   A    +    GG +PNMP  P   +N LFV+ LP   T   +
Sbjct: 138 GMPMNS----AYPGVYGAAPPLSQVPYPGGMKPNMPEAPAPPNNILFVQNLPHETTPMVL 197

Query: 151 AHIFRPFVGYKEVRLVNKESRSAGRDPVVLGFVDFVSPAHAATAMDALQGYKFDE 205
             +F  + G+KEVR++  +          + FV+F     +  AM  LQG+K  +
Sbjct: 198 QMLFCQYQGFKEVRMIEAKPG--------IAFVEFADEMQSTVAMQGLQGFKIQQ 240

The following BLAST results are available for this feature:

BLAST of CSPI03G19610 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
G7ID19	2.7e-49	45.95	RNA-binding protein 2 OS=Medicago truncatula OX=3880 GN=RBP2 PE=2 SV=1	[more]
Q8H0P8	2.1e-46	46.88	RNA-binding protein 1 OS=Medicago truncatula OX=3880 GN=RBP1 PE=2 SV=1	[more]
A1A6K6	2.9e-43	46.50	Nuclear speckle RNA-binding protein A OS=Arabidopsis thaliana OX=3702 GN=NSRA PE...	[more]
F4HWF9	8.1e-38	45.28	Nuclear speckle RNA-binding protein B OS=Arabidopsis thaliana OX=3702 GN=NSRB PE...	[more]
Q6JB11	1.2e-28	69.41	Protein MATERNALLY EXPRESSED GENE 5 OS=Zea mays OX=4577 GN=MEG5 PE=2 SV=1	[more]

BLAST of CSPI03G19610 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L796	1.3e-131	99.57	RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G238140 PE=4 SV...	[more]
A0A1S3C3F7	2.1e-129	97.84	RNA-binding protein 2-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496055 PE...	[more]
A0A6J1E554	1.6e-121	91.85	RNA-binding protein 2-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111430...	[more]
A0A6J1J2D2	3.0e-120	91.42	RNA-binding protein 2-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC11148278...	[more]
A0A6J1CHS7	7.7e-116	89.27	RNA-binding protein 2-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC11101...	[more]

BLAST of CSPI03G19610 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004146235.1	2.7e-131	99.57	RNA-binding protein 2 isoform X2 [Cucumis sativus] >KGN57648.1 hypothetical prot...	[more]
XP_008455996.1	4.3e-129	97.84	PREDICTED: RNA-binding protein 2-like isoform X2 [Cucumis melo]	[more]
XP_038897625.1	8.4e-125	94.83	RNA-binding protein 2-like isoform X1 [Benincasa hispida]	[more]
XP_023553422.1	1.9e-121	91.85	RNA-binding protein 2-like isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_022923072.1	3.3e-121	91.85	RNA-binding protein 2-like isoform X2 [Cucurbita moschata]	[more]

BLAST of CSPI03G19610 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G76940.1	2.0e-44	46.50	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT1G21320.2	1.0e-43	43.70	nucleotide binding;nucleic acid binding	[more]
AT1G21320.1	5.7e-39	45.28	nucleotide binding;nucleic acid binding	[more]
AT1G76940.2	6.6e-35	53.94	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT2G47580.1	2.6e-07	31.30	spliceosomal protein U1A	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 134..211 e-value: 3.0E-6 score: 36.8
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 135..203 e-value: 5.4E-11 score: 42.2
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 133..219 score: 11.861064
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 129..219 e-value: 6.3E-19 score: 69.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..19
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..27
None	No IPR available	PANTHER	PTHR10501:SF20	PROTEIN MATERNALLY EXPRESSED GENE 5	coord: 13..232
None	No IPR available	PANTHER	PTHR10501	U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A/U2 SMALL NUCLEAR RIBONUCLEOPROTEIN B	coord: 13..232
None	No IPR available	CDD	cd12420	RRM_RBPMS_like	coord: 133..215 e-value: 7.81991E-36 score: 120.067
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 118..227

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G19610.1	CSPI03G19610.1	mRNA
CSPI03G19610.2	CSPI03G19610.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003676	nucleic acid binding