CSPI03G19410 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI03G19410
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	S4 RNA-binding domain-containing protein
Location	Chr3: 15198925 .. 15204646 (+)
RNA-Seq Expression	CSPI03G19410
Synteny	CSPI03G19410

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGTTTGGAACGGTTGCGCGTTGGCACTTACTGAGCCATGGCCGCAACGGCAACGAGCATTGCAGCTCTGTGGAGTTTAAGAAGGGCTGCTCAGTTTTCGAGTTTCCGAAGACCCCTTGCCCTTAATCTCAATAGGCTCTGCTTTAACGAGGCCCGGTTTCCCTCTTCTCCTCTGGGGACCTCAGGTTTCGATTCGCTTATTCATCTCAATGTTATAGAAAATTGTGGATTATTATTGTTTAGTGGGCTGTTTATTCTTTAATTCCACTATGATTGCTTACTAAGATCAAAGTAATCGAGCACTTAGTTCAGGTGATATTAGTTTTCTATTGGGCATCGATTGGAATTAATCGACCTTATTGGGGGAGGGGCGCTGCTGTATGCATGCTATCTCCATACCAATGTAGATATCGCTGAGATTACTGCTGAAAGTCTATTCGAATTGGAGCCAGATAATGAGCTCAATTTTGAGCTTCTGGTAAAGATTTATGGCAATGCCGGGAGATCGGAAGACGAGAAGCGAGTGAAATTAATGATGACAGAACGAGGACTGGATTCATAGTGTAGATAATATGTAAAAATCCATTCACACTCATGGATGGATAATGAATTCATCTGGATAGATAACAGGTTTAGTGTGAAGTTAAAATGAGAATTCACACAGAGTTGGAAATGGATTCCACCGAGAGTAAAGCAATCAATGCCAGAAGCTCAAGACACTCAAGCTTGCTGATTTTTTGTGGAAAACCTCCTACTTCTACTTCTTTCGTTCTCTATAGTAGATTTTATTTTTGGGCTTGTTTATCTCCTGTTGTTCTTTACTTTCTGTTTTGTATTTGCGTTGGTTGAATTGGTGTAGTTGGAGTTTCAATGTTTTTGGATGTACTATTGGATATGCTGACGACACTAAAGTGGTCTCAACCTAGTTGAAATGTCCGATTCACCTCTTGATCCTTCCTTTTGCTTCTTTATTGTACTTTGAGTTTTATTTTAATAAAGAAGCTCATCTCTGTTTTAAAAAAAGCAATCATATTGGTTTAAAATCATTTCTTAAAGTGGATAATCCCTAAAGTGATTGATCAGCAATCACTGTATGGTGATTTAGCACTTATAGAATTACTTTTAAATGTTTTTCAACTAAACAACTTTTGTTTGAAATGTCAACCAGGGCTTTAATTGTAATCAATTTTGTAGACAATGTTTTAACAAAAATGCTTTCTTAAAAGTGTTTAACTTATAAGGTATGCTTTCATTTAGGACAACGTTTACTACTGTATGAAGTGCTGCAGCATTACGCTTGGGCAATGGTTAGAGATGTTTTCGGAAGGGGTGCCTATTGGGTTTCAGGCCTCCATCTTCGTGTTGAAAACATAGTAACTTAATATCCCTGTTGTCTATTGAAGTCCATGTGGGGCAGTTGATAGATACCTCAAATAGAGAAAAGGAAAATTATATGTTGAACTTGCAGATTCGTAATAAATTATGAATAAAATAACCTTGGTTTGGAAAAAAAGTACTTCCTTTTAAACTATGTATCCACCAGCCCGTCTTATCTATCAAATCCTTAAATTATGTCACTTGCATTATAAGTCAAAAAATGAACATGCTGTACATGAGATAAGGGAAAAGATAAGTAATTCTTCTAATCCTTAATGTTAACCCAAGTATTTTTACTCATACGTTTCAATAGTTGCATGTTAATAATCATCCAAATGTGATTTCAGGAATATGCCAATTAGTGCAAGCTGTAAAGGGAGATATTGATGTTTTACTCAATGGAGTTGGAGATAAAGGTGTTATTGTAGACGTGAAACAAATTCTTGTGATGGTATTGCCTGATAAACTTTTAATGACATGTTAGTATGCAAGACTAGAGCTTTAACTATCTATATATTCTTTTACCTTGCATTCTTTATTCATGCTGTGAAGACTGAATTAGCACGACTCCACAAATTTCTATAGATTTAAAGGGAAAAAGTCAATCCTTTTTCTTCACCTTTCATTCTTATGAAATTTGAAAAAGAAACATCAATATAGTAACCCTTTTGTCTCTTGGTTGTGACTTGTGAGGGATGATTTTGGTTCTTTAAATCTTTTGGTTTCATCTAGGCTAAACGTTCATTATCAAGACGAGAAGTTCTCCATACAAACTTTCTTACCCCACCTGTGGTGAAAGAGTCAATGCTAGCTATACAAAAATTAGCTGACGTGAAAGCAATAGCTCAGGGAGGATACCCAGAGGTGAAAATATAGAAGCCTTGTTTGTTTTCTTCAGTTGGGGCTTGAGTATATGAATCTAAGATATATTGCTGATACCACATGTATTTCAAGTTGCCAAAATTTTCAGGCAGAGCGCTGCCGGATTTCTGTTGGTCATGCAGATGAACTAACAAGTGATCCAGACATAATTTCAGCATTGAGGTATTGTTCTTTAATCTTTCACTTTAGTCCACTTATTTGAGCGGTGGAATCAATTATTTTTTTGTTGTTTCTAACTTTCTTCTTTCTGAAGGGTTTTATTTTTTATTTTTAATTTTTTTCCTAGTATCACAGGAAATTTTACGTTTCACCCTTGTTCACATGGGGACTTCCTTGGATCAATTCTTGGTACTGGCATTGCTAGAGAAAAGCTTGGTGATATCATGCTCCAGGTATAATCATATTAAATATGAAGTATAATTACAACTATTTTGTTCTCATTCTTGCTGCACATTTGAAGCTTCGCGTGCTGCTATTGATGGCATTTTTTAATGATGTATTATCTTATAATGACTATTTGAACTTGTGACTGATGAAGTATTATAAATGCATTAAACTTTGGTCATCTATAGGTTGGTTTTATTTTATGTTGAGGAATCTAATTTTCTTATTCAAATCCCCAAAAACTGATGGTAAAAGTTTTGCTTTGGGTTATCATGCGCTTGGTGCATTCCGCAGTGACTAAAAGTTTGGTCAGAAATGTGGGCATATACATTTTTTTTAATAATTTCATGTGGAATAGAACTTATGAAAAAGATTCAATTTAGATAAATACTACAACGTCTAACTGCATGCCTTGTCTGTTTCCAGCAGTAGTTTTGTGTAAATTTTATAGGTTTTTGATAAAAAATGGCCACCTAGCCATCGTGGGCCAGATTTCTTTATTCTCTTAGCATTCCCTTATTTTCAGGAAGAAACGGGAGCTCAAGTAGTCATTGTTCCAGAACTTGTTGACTTTCTGATATCATCACTGCGCAAGGTAGTGTCATTGTCTTGGATGGTTGCTTCTAACATGATGTTACATAAATTAATATGCGAATGAAAAAATGTGTTACCTCTGATTGCATTTCTTGTGTGTATTAAATAAGTTAAGGTACATATTGGTGAAGCCTGCATGACCTAATAGATAATCAAACTTTTTGAAAATTTTCTTCATTTATCTCTTTATTTGTCATGCCATTCTTAATGTCAGGTTGGCAATGTCACAGTTTCTTGTACGAGGATTCCATTGACAGCTCTTGAATATGAACCACCGAAGTATGAGTTTATGTTGGTAAATTTTCATGTTGGTTTATGATTATTTTAATTTAGTGTTTTCTTCTTTCATGTGCAGGACTAAGACATTTAAAACCATTGAGGCATCTCTTAGGGTAGATGCTATAGCAAGTGCTGGATTCAAGATTTCAAGATCTAAACTAGTGGATTTAATCAGGTGACGTGGCTTCTGGTTTCTGCTACCATATTTTATTGAAAGTGATAAACAGGAAATATGTCACCAAGTTTCCTAGAAACCCGAGAACCGGGAGAAAAACCATGATTTGACTTTCTTATTAATTTCTCATATTAACAAAATGTACAATAGGGGAAAATAAATAATCAATAACCTTAATGTAAAAAAGAAAAGAATATTAGGTTAAGCCCACTAATTCTAACCTCCCCCTAGTTGGATGCTAATATCAACAAGGCCCAACTTGCTAACACATGAATCAAAACTTTGTCTGAGAAGCCCCTTGGTGAGAATATCAGCTCTGTCTGGCTGGATTTGTGGTGTGTGTATGGGCGACTGAACAAAAGTGTTATGCAGCTGGGAAAAGAATAAAAGTGGCTGGACTGGTTGAATGGTGGAGTGGGTTGGTGGTGGCGCGTGGACGGACGGGCTTGGCAATTCGCTTGGCGCGTGCGGCTGGTAACCTTCATTCGGCAGCACGGTTGGCTAGGACTACTCACCGGCAATTTCTGAAGCTGAAGGAACAGATTGTCCATGACGGCGGGGACGGCACTCATCCCGGAGGTGGCTGTCTCGTTGTCGTCCTTTGTTTGAGTTTCATCAATATTGTTGTCTAGTATTTCGTCATTGTCCCGCTCTGATACCATATTTAAAGAAGGAAATATGACACCAAGTTACATGGAAACATGAGAACCAGAAGAAAAACCACGATTTGACTTGTTAATTTCTCATGTTAACAAAGGGTACAATAGAGAAAAATAAATAGACAATGAGCTAGAAAAGAATATTAGGGTTAATCTTTCCTTGAGCTTAAGCCCACAATTTCGAACATATTATATCTCACAGATTATTTCTTGTACGGAATGAGTCTATTATCTATTTTGTATCCCTATTGAACAAAAATACTGACATTGTTCCTTCAAAATTCTATTTATTTGGCAAGTAATCATTATATAAGAAGGATTCAACTTTTGGAACAAACAATTTGAAGAACTATTGTCTAAGTTCCAATCCCTAAAGAGAATATGTTGTTGAATCTTACGCAATAGTGCTTCCCTTCTATTTTCCATTTTTACTAGTGGAATATAGTTGACTTGATCCAAAACTTTACACCTTATGCTCAATACTAATGAAAGCATTTGAGACTACATTAATTGGGTGATACATGACAGATTTTAATAATGTATAGGTTTCCTTCTATCCTCGTTGATTTGCCTATTTGAACATAATCTGAAACTTTAGACATCATTTGTTGTATCTGTAGATGGTTACACTATGCCTTAATATGAATGATAAATACACAACTTTCTTAAAGTTTCTGGGAAATAAGGTGTTGGAATACCTTATCTCCTATTTCTTTTGTGAAAGTATATTAACCTGAAATTGTTATATGAGCAGTAGCGGGGATGTTCGTGTCAATTGGACGCCAATTACAAAAAATGGAACCATTTTAAAGACTGGCGATATTGTTTCTGTTAGTGGCAAAGGGAGACTAAAGGTGAGTTTTTTCGGTTGAATCGAAATCAAAACTAGTTGCACTGGGTTCATGAATTTTCTAGCTTAGGATTTCTGACTTCTGGTTATTTTCCTCATTCAGATTGGAGAAATAAATTCAACAAAAAAGGGAAAATTTGCTGTTGAGCTTATCAGATATGTGTAAGCTCTAGAGATATTGTCTATTGGAGATGAACTGGGTAAGTCTTCACAGGAGCCTCTTTGTGGGGTGAAATCAGGATTGCTTCCTTTGGAATAACTGAAGTAAGTCATTATTCAACATGACATTAATCTGATTGTATATGTGAAAATCCGAACACTTATTCATCCATTCTTAAAAATTTCATTGGGAAAATCTGTCTCAGCATTTCAATGTCAATGCTTTTTAGTTCTTTTGTTTCTGGTTGTGTTGCCTTCTTTTCTGGAATGAATTCGTTCAAACTAATGTTGTCTAAGGAGGGAATTTAAGCACAAAGTTATAGCTTCACATTAACTATTTGTTATTCCAAAGATTTATCTCATC

mRNA sequence

AGTTTGGAACGGTTGCGCGTTGGCACTTACTGAGCCATGGCCGCAACGGCAACGAGCATTGCAGCTCTGTGGAGTTTAAGAAGGGCTGCTCAGTTTTCGAGTTTCCGAAGACCCCTTGCCCTTAATCTCAATAGGCTCTGCTTTAACGAGGCCCGGTTTCCCTCTTCTCCTCTGGGGACCTCAGGAATATGCCAATTAGTGCAAGCTGTAAAGGGAGATATTGATGTTTTACTCAATGGAGTTGGAGATAAAGGTGTTATTGTAGACGTGAAACAAATTCTTGTGATGGCTAAACGTTCATTATCAAGACGAGAAGTTCTCCATACAAACTTTCTTACCCCACCTGTGGTGAAAGAGTCAATGCTAGCTATACAAAAATTAGCTGACGTGAAAGCAATAGCTCAGGGAGGATACCCAGAGGCAGAGCGCTGCCGGATTTCTGTTGGTCATGCAGATGAACTAACAAGTGATCCAGACATAATTTCAGCATTGAGTATCACAGGAAATTTTACGTTTCACCCTTGTTCACATGGGGACTTCCTTGGATCAATTCTTGGTACTGGCATTGCTAGAGAAAAGCTTGGTGATATCATGCTCCAGGAAGAAACGGGAGCTCAAGTAGTCATTGTTCCAGAACTTGTTGACTTTCTGATATCATCACTGCGCAAGGTTGGCAATGTCACAGTTTCTTGTACGAGGATTCCATTGACAGCTCTTGAATATGAACCACCGAAGACTAAGACATTTAAAACCATTGAGGCATCTCTTAGGGTAGATGCTATAGCAAGTGCTGGATTCAAGATTTCAAGATCTAAACTAGTGGATTTAATCAGTAGCGGGGATGTTCGTGTCAATTGGACGCCAATTACAAAAAATGGAACCATTTTAAAGACTGGCGATATTGTTTCTGTTAGTGGCAAAGGGAGACTAAAGATTGGAGAAATAAATTCAACAAAAAAGGGAAAATTTGCTGTTGAGCTTATCAGATATGTGTAAGCTCTAGAGATATTGTCTATTGGAGATGAACTGGGTAAGTCTTCACAGGAGCCTCTTTGTGGGGTGAAATCAGGATTGCTTCCTTTGGAATAACTGAAGTAAGTCATTATTCAACATGACATTAATCTGATTGTATATGTGAAAATCCGAACACTTATTCATCCATTCTTAAAAATTTCATTGGGAAAATCTGTCTCAGCATTTCAATGTCAATGCTTTTTAGTTCTTTTGTTTCTGGTTGTGTTGCCTTCTTTTCTGGAATGAATTCGTTCAAACTAATGTTGTCTAAGGAGGGAATTTAAGCACAAAGTTATAGCTTCACATTAACTATTTGTTATTCCAAAGATTTATCTCATC

Coding sequence (CDS)

ATGGCCGCAACGGCAACGAGCATTGCAGCTCTGTGGAGTTTAAGAAGGGCTGCTCAGTTTTCGAGTTTCCGAAGACCCCTTGCCCTTAATCTCAATAGGCTCTGCTTTAACGAGGCCCGGTTTCCCTCTTCTCCTCTGGGGACCTCAGGAATATGCCAATTAGTGCAAGCTGTAAAGGGAGATATTGATGTTTTACTCAATGGAGTTGGAGATAAAGGTGTTATTGTAGACGTGAAACAAATTCTTGTGATGGCTAAACGTTCATTATCAAGACGAGAAGTTCTCCATACAAACTTTCTTACCCCACCTGTGGTGAAAGAGTCAATGCTAGCTATACAAAAATTAGCTGACGTGAAAGCAATAGCTCAGGGAGGATACCCAGAGGCAGAGCGCTGCCGGATTTCTGTTGGTCATGCAGATGAACTAACAAGTGATCCAGACATAATTTCAGCATTGAGTATCACAGGAAATTTTACGTTTCACCCTTGTTCACATGGGGACTTCCTTGGATCAATTCTTGGTACTGGCATTGCTAGAGAAAAGCTTGGTGATATCATGCTCCAGGAAGAAACGGGAGCTCAAGTAGTCATTGTTCCAGAACTTGTTGACTTTCTGATATCATCACTGCGCAAGGTTGGCAATGTCACAGTTTCTTGTACGAGGATTCCATTGACAGCTCTTGAATATGAACCACCGAAGACTAAGACATTTAAAACCATTGAGGCATCTCTTAGGGTAGATGCTATAGCAAGTGCTGGATTCAAGATTTCAAGATCTAAACTAGTGGATTTAATCAGTAGCGGGGATGTTCGTGTCAATTGGACGCCAATTACAAAAAATGGAACCATTTTAAAGACTGGCGATATTGTTTCTGTTAGTGGCAAAGGGAGACTAAAGATTGGAGAAATAAATTCAACAAAAAAGGGAAAATTTGCTGTTGAGCTTATCAGATATGTGTAA

Protein sequence

MAATATSIAALWSLRRAAQFSSFRRPLALNLNRLCFNEARFPSSPLGTSGICQLVQAVKGDIDVLLNGVGDKGVIVDVKQILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLADVKAIAQGGYPEAERCRISVGHADELTSDPDIISALSITGNFTFHPCSHGDFLGSILGTGIAREKLGDIMLQEETGAQVVIVPELVDFLISSLRKVGNVTVSCTRIPLTALEYEPPKTKTFKTIEASLRVDAIASAGFKISRSKLVDLISSGDVRVNWTPITKNGTILKTGDIVSVSGKGRLKIGEINSTKKGKFAVELIRYV*

Homology

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BLAST of CSPI03G19410 vs. ExPASy Swiss-Prot
Match: P71020 (Putative RNA-binding protein YlmH OS=Bacillus subtilis (strain 168) OX=224308 GN=ylmH PE=4 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 3.0e-19
Identity = 69/225 (30.67%), Postives = 112/225 (49.78%), Query Frame = 0


Query: 97  TNFLTPPVVKESML--AIQKLADVKAIAQGGYPEAERCRISVGHADELTSDPDI-ISALS 156
           T+FL P   +E ++  A+   ADV     GGY  AER R  +        + D  + A +
Sbjct: 35  TDFLDP---REQVILSAVTGQADVGLAFSGGYDRAERKRAILFPEYITPEESDFELQAFN 94

Query: 157 ITGNFTFHPCSHGDFLGSILGTGIAREKLGDIMLQEETGAQVVIVPELVDFLISSLRKVG 216
           +     F    H   LG+++G G+ R+K GDI+   ET  Q+++  +  DF+ + L + G
Sbjct: 95  VRYADKFVSVDHRSLLGALMGIGLKRQKFGDIVF-SETAVQLIVSADTADFVAAQLTQAG 154

Query: 217 NVTVSCTRIPLTALEYEPPKTKTFKTIEASLRVDAIASAGFKISRSKLVDLISSGDVRVN 276
              VS  +I L+ L       +      +SLR+DA+ ++  + SR K   L+ +G V+VN
Sbjct: 155 KAAVSLEKIDLSDLNIPAVDVEIRDDTVSSLRLDAVCASMSRQSRQKSQTLVKNGLVKVN 214

Query: 277 WTPITKNGTILKTGDIVSVSGKGRLKIGEI-NSTKKGKFAVELIR 318
           W  +     I+  GD++S+ G GR  + +I   TKK K+ V   R
Sbjct: 215 WKVVEDPSYIVAEGDMLSIRGFGRCSLTKIEGKTKKDKWRVTFER 255

[Close]

BLAST of CSPI03G19410 vs. ExPASy TrEMBL
Match: A0A0A0LC56 (S4 RNA-binding domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G233470 PE=4 SV=1)

HSP 1 Score: 609.0 bits (1569), Expect = 1.1e-170
Identity = 318/319 (99.69%), Postives = 318/319 (99.69%), Query Frame = 0


Query: 1   MAATATSIAALWSLRRAAQFSSFRRPLALNLNRLCFNEARFPSSPLGTSGICQLVQAVKG 60
           MAATATSIAALWSLRRAAQFSSFRRPLALNLNRLCFNEARFPSSPLGTSGICQLVQAVKG
Sbjct: 1   MAATATSIAALWSLRRAAQFSSFRRPLALNLNRLCFNEARFPSSPLGTSGICQLVQAVKG 60

Query: 61  DIDVLLNGVGDKGVIVDVKQILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLADVKA 120
           DIDVLLNGVGDKGVIVDVKQILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLADVKA
Sbjct: 61  DIDVLLNGVGDKGVIVDVKQILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLADVKA 120

Query: 121 IAQGGYPEAERCRISVGHADELTSDPDIISALSITGNFTFHPCSHGDFLGSILGTGIARE 180
           IAQGGYPEAERCRISVGHADELTSDPDIISALSITGNFTFHPCSHGDFLGSILGTGIARE
Sbjct: 121 IAQGGYPEAERCRISVGHADELTSDPDIISALSITGNFTFHPCSHGDFLGSILGTGIARE 180

Query: 181 KLGDIMLQEETGAQVVIVPELVDFLISSLRKVGNVTVSCTRIPLTALEYEPPKTKTFKTI 240
           KLGDIMLQEETGAQVVIVPELVDFLISSLRKVGNVTVSCTRIPLTALEYEPPKTKTFKTI
Sbjct: 181 KLGDIMLQEETGAQVVIVPELVDFLISSLRKVGNVTVSCTRIPLTALEYEPPKTKTFKTI 240

Query: 241 EASLRVDAIASAGFKISRSKLVDLISSGDVRVNWTPITKNGTILKTGDIVSVSGKGRLKI 300
           EASLRVDAIASAGFKISRSKLVDLISSGDVRVNWT ITKNGTILKTGDIVSVSGKGRLKI
Sbjct: 241 EASLRVDAIASAGFKISRSKLVDLISSGDVRVNWTSITKNGTILKTGDIVSVSGKGRLKI 300

Query: 301 GEINSTKKGKFAVELIRYV 320
           GEINSTKKGKFAVELIRYV
Sbjct: 301 GEINSTKKGKFAVELIRYV 319

[Close]

BLAST of CSPI03G19410 vs. ExPASy TrEMBL
Match: A0A1S3C3I2 (putative RNA-binding protein YlmH isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496076 PE=4 SV=1)

HSP 1 Score: 588.6 bits (1516), Expect = 1.6e-164
Identity = 305/319 (95.61%), Postives = 313/319 (98.12%), Query Frame = 0


Query: 1   MAATATSIAALWSLRRAAQFSSFRRPLALNLNRLCFNEARFPSSPLGTSGICQLVQAVKG 60
           MAAT T+I ALWSLR A+QFSSFRRPL +NLNRL F+E RFPSSPLGTSGICQLVQAVKG
Sbjct: 1   MAATTTTIGALWSLRIASQFSSFRRPLPVNLNRLYFHETRFPSSPLGTSGICQLVQAVKG 60

Query: 61  DIDVLLNGVGDKGVIVDVKQILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLADVKA 120
           DIDVLLNGVGDKGVIVDVKQILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLADVKA
Sbjct: 61  DIDVLLNGVGDKGVIVDVKQILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLADVKA 120

Query: 121 IAQGGYPEAERCRISVGHADELTSDPDIISALSITGNFTFHPCSHGDFLGSILGTGIARE 180
           IAQGGYPEAERCRISVGH+DELTSDPDIISALSITGNFTFHPCSHGDFLGSILGTGIARE
Sbjct: 121 IAQGGYPEAERCRISVGHSDELTSDPDIISALSITGNFTFHPCSHGDFLGSILGTGIARE 180

Query: 181 KLGDIMLQEETGAQVVIVPELVDFLISSLRKVGNVTVSCTRIPLTALEYEPPKTKTFKTI 240
           KLGDI++QEETGAQVVIVPELVDFLISSLRKVGNVTVSCTRIPLTALEYEPPKTKTFKTI
Sbjct: 181 KLGDIIIQEETGAQVVIVPELVDFLISSLRKVGNVTVSCTRIPLTALEYEPPKTKTFKTI 240

Query: 241 EASLRVDAIASAGFKISRSKLVDLISSGDVRVNWTPITKNGTILKTGDIVSVSGKGRLKI 300
           EASLRVDA+ASAGFKISRSKLVDLISSGDVRVNWTPITKNGTILKTGDIVSVSGKGRLKI
Sbjct: 241 EASLRVDALASAGFKISRSKLVDLISSGDVRVNWTPITKNGTILKTGDIVSVSGKGRLKI 300

Query: 301 GEINSTKKGKFAVELIRYV 320
           GEINSTKKGKFAVELIRYV
Sbjct: 301 GEINSTKKGKFAVELIRYV 319

[Close]

BLAST of CSPI03G19410 vs. ExPASy TrEMBL
Match: A0A6J1CP18 (uncharacterized protein LOC111012786 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111012786 PE=4 SV=1)

HSP 1 Score: 556.2 bits (1432), Expect = 8.8e-155
Identity = 293/318 (92.14%), Postives = 303/318 (95.28%), Query Frame = 0


Query: 5   ATSIAALWSLRRAAQFSSFRRPLALNLNRLCFNEARF---PSSPLGTSGICQLVQAVKGD 64
           ATSI ALWSLRRAAQ SSFR PLALNL+   F++ARF   PSSP G+SGICQLVQAVKGD
Sbjct: 3   ATSIGALWSLRRAAQASSFRIPLALNLS---FHQARFPPSPSSPPGSSGICQLVQAVKGD 62

Query: 65  IDVLLNGVGDKGVIVDVKQILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLADVKAI 124
           IDVLLNGVGDKGVIVDVK ILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLADVKAI
Sbjct: 63  IDVLLNGVGDKGVIVDVKHILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLADVKAI 122

Query: 125 AQGGYPEAERCRISVGHADELTSDPDIISALSITGNFTFHPCSHGDFLGSILGTGIAREK 184
           AQGGYPEAERCRISVGHADELTSDPDIISALSITGNFTFHPCSHGDFLGSILGTGIAREK
Sbjct: 123 AQGGYPEAERCRISVGHADELTSDPDIISALSITGNFTFHPCSHGDFLGSILGTGIAREK 182

Query: 185 LGDIMLQEETGAQVVIVPELVDFLISSLRKVGNVTVSCTRIPLTALEYEPPKTKTFKTIE 244
           LGDI+LQ E GAQVV+VPELVDFLISSLRKVGNVTVSCTRIPLTAL+YEPPKTKTF TIE
Sbjct: 183 LGDIILQGENGAQVVLVPELVDFLISSLRKVGNVTVSCTRIPLTALDYEPPKTKTFNTIE 242

Query: 245 ASLRVDAIASAGFKISRSKLVDLISSGDVRVNWTPITKNGTILKTGDIVSVSGKGRLKIG 304
           ASLRVDAIASAGFKISRSKLVDLISSGDVRVNWTP+TKNGT LKTGD+VSVSGKGRLKIG
Sbjct: 243 ASLRVDAIASAGFKISRSKLVDLISSGDVRVNWTPVTKNGTTLKTGDVVSVSGKGRLKIG 302

Query: 305 EINSTKKGKFAVELIRYV 320
           EINSTKKGKF+VELIRYV
Sbjct: 303 EINSTKKGKFSVELIRYV 317

[Close]

BLAST of CSPI03G19410 vs. ExPASy TrEMBL
Match: A0A6J1CLT4 (uncharacterized protein LOC111012786 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111012786 PE=4 SV=1)

HSP 1 Score: 550.1 bits (1416), Expect = 6.3e-153
Identity = 292/318 (91.82%), Postives = 302/318 (94.97%), Query Frame = 0


Query: 5   ATSIAALWSLRRAAQFSSFRRPLALNLNRLCFNEARF---PSSPLGTSGICQLVQAVKGD 64
           ATSI ALWSLRRAAQ SSFR PLALNL+   F++ARF   PSSP G+SGICQLVQAVKGD
Sbjct: 3   ATSIGALWSLRRAAQASSFRIPLALNLS---FHQARFPPSPSSPPGSSGICQLVQAVKGD 62

Query: 65  IDVLLNGVGDKGVIVDVKQILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLADVKAI 124
           IDVLLNGVGDKGVIVDVK ILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLADVKAI
Sbjct: 63  IDVLLNGVGDKGVIVDVKHILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLADVKAI 122

Query: 125 AQGGYPEAERCRISVGHADELTSDPDIISALSITGNFTFHPCSHGDFLGSILGTGIAREK 184
           AQGGYPEAERCRISVGHADELTSDPDIISALSITGNFTFHPCSHGDFLGSILGTGIAREK
Sbjct: 123 AQGGYPEAERCRISVGHADELTSDPDIISALSITGNFTFHPCSHGDFLGSILGTGIAREK 182

Query: 185 LGDIMLQEETGAQVVIVPELVDFLISSLRKVGNVTVSCTRIPLTALEYEPPKTKTFKTIE 244
           LGDI+LQ E GAQVV+VPELVDFLISSLRKVGNVTVSCTRIPLTAL+YEPPKTKTF TIE
Sbjct: 183 LGDIILQGENGAQVVLVPELVDFLISSLRKVGNVTVSCTRIPLTALDYEPPKTKTFNTIE 242

Query: 245 ASLRVDAIASAGFKISRSKLVDLISSGDVRVNWTPITKNGTILKTGDIVSVSGKGRLKIG 304
           ASLRVDAIASAGFKISRSKLVDLI SGDVRVNWTP+TKNGT LKTGD+VSVSGKGRLKIG
Sbjct: 243 ASLRVDAIASAGFKISRSKLVDLI-SGDVRVNWTPVTKNGTTLKTGDVVSVSGKGRLKIG 302

Query: 305 EINSTKKGKFAVELIRYV 320
           EINSTKKGKF+VELIRYV
Sbjct: 303 EINSTKKGKFSVELIRYV 316

[Close]

BLAST of CSPI03G19410 vs. ExPASy TrEMBL
Match: A0A6J1J103 (uncharacterized protein LOC111480897 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111480897 PE=4 SV=1)

HSP 1 Score: 549.3 bits (1414), Expect = 1.1e-152
Identity = 286/322 (88.82%), Postives = 302/322 (93.79%), Query Frame = 0


Query: 1   MAATATSIAALWSLRRAAQFSSFRRPLALNLNRLCFNEARF---PSSPLGTSGICQLVQA 60
           MAA   SI ALWSLRRAAQ SS R PLA+NL+++ F+EARF   PSSPLG+SG+CQLVQA
Sbjct: 1   MAAATASIGALWSLRRAAQSSSLRTPLAVNLSKVSFHEARFPTSPSSPLGSSGMCQLVQA 60

Query: 61  VKGDIDVLLNGVGDKGVIVDVKQILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLAD 120
           VKGDIDVLLNGVGDKGVIVDVK ILVMAKRSLSRREVLHTNFLTPPVVKESMLAI+KLAD
Sbjct: 61  VKGDIDVLLNGVGDKGVIVDVKHILVMAKRSLSRREVLHTNFLTPPVVKESMLAIKKLAD 120

Query: 121 VKAIAQGGYPEAERCRISVGHADELTSDPDIISALSITGNFTFHPCSHGDFLGSILGTGI 180
           VKAIAQGGYPEAERCRISVGHADELTSDPD++SALSITGNF FH C+HGDFLG+ILGTGI
Sbjct: 121 VKAIAQGGYPEAERCRISVGHADELTSDPDVVSALSITGNFMFHTCTHGDFLGAILGTGI 180

Query: 181 AREKLGDIMLQEETGAQVVIVPELVDFLISSLRKVGNVTVSCTRIPLTALEYEPPKTKTF 240
           AREKLGDI+LQEE GAQVVIVPELVDFL+SSL KVGNVTVSCTRIPLT L+YEPPKTKTF
Sbjct: 181 AREKLGDIILQEEKGAQVVIVPELVDFLVSSLHKVGNVTVSCTRIPLTDLDYEPPKTKTF 240

Query: 241 KTIEASLRVDAIASAGFKISRSKLVDLISSGDVRVNWTPITKNGTILKTGDIVSVSGKGR 300
           KTIEASLRVDA+ASAGFKISRSKLVD ISSGDVRVNWT ITKNGTILKTGDIVSVSGKGR
Sbjct: 241 KTIEASLRVDALASAGFKISRSKLVDFISSGDVRVNWTTITKNGTILKTGDIVSVSGKGR 300

Query: 301 LKIGEINSTKKGKFAVELIRYV 320
           LKIGEIN TKKGKFAVELIRYV
Sbjct: 301 LKIGEINPTKKGKFAVELIRYV 322

[Close]

BLAST of CSPI03G19410 vs. NCBI nr
Match: XP_004146247.1 (uncharacterized protein LOC101221944 [Cucumis sativus] >XP_031738291.1 uncharacterized protein LOC101221944 [Cucumis sativus] >KGN57626.1 hypothetical protein Csa_011390 [Cucumis sativus])

HSP 1 Score: 609.0 bits (1569), Expect = 2.4e-170
Identity = 318/319 (99.69%), Postives = 318/319 (99.69%), Query Frame = 0


Query: 1   MAATATSIAALWSLRRAAQFSSFRRPLALNLNRLCFNEARFPSSPLGTSGICQLVQAVKG 60
           MAATATSIAALWSLRRAAQFSSFRRPLALNLNRLCFNEARFPSSPLGTSGICQLVQAVKG
Sbjct: 1   MAATATSIAALWSLRRAAQFSSFRRPLALNLNRLCFNEARFPSSPLGTSGICQLVQAVKG 60

Query: 61  DIDVLLNGVGDKGVIVDVKQILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLADVKA 120
           DIDVLLNGVGDKGVIVDVKQILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLADVKA
Sbjct: 61  DIDVLLNGVGDKGVIVDVKQILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLADVKA 120

Query: 121 IAQGGYPEAERCRISVGHADELTSDPDIISALSITGNFTFHPCSHGDFLGSILGTGIARE 180
           IAQGGYPEAERCRISVGHADELTSDPDIISALSITGNFTFHPCSHGDFLGSILGTGIARE
Sbjct: 121 IAQGGYPEAERCRISVGHADELTSDPDIISALSITGNFTFHPCSHGDFLGSILGTGIARE 180

Query: 181 KLGDIMLQEETGAQVVIVPELVDFLISSLRKVGNVTVSCTRIPLTALEYEPPKTKTFKTI 240
           KLGDIMLQEETGAQVVIVPELVDFLISSLRKVGNVTVSCTRIPLTALEYEPPKTKTFKTI
Sbjct: 181 KLGDIMLQEETGAQVVIVPELVDFLISSLRKVGNVTVSCTRIPLTALEYEPPKTKTFKTI 240

Query: 241 EASLRVDAIASAGFKISRSKLVDLISSGDVRVNWTPITKNGTILKTGDIVSVSGKGRLKI 300
           EASLRVDAIASAGFKISRSKLVDLISSGDVRVNWT ITKNGTILKTGDIVSVSGKGRLKI
Sbjct: 241 EASLRVDAIASAGFKISRSKLVDLISSGDVRVNWTSITKNGTILKTGDIVSVSGKGRLKI 300

Query: 301 GEINSTKKGKFAVELIRYV 320
           GEINSTKKGKFAVELIRYV
Sbjct: 301 GEINSTKKGKFAVELIRYV 319

[Close]

BLAST of CSPI03G19410 vs. NCBI nr
Match: XP_008456024.1 (PREDICTED: putative RNA-binding protein YlmH isoform X2 [Cucumis melo])

HSP 1 Score: 588.6 bits (1516), Expect = 3.3e-164
Identity = 305/319 (95.61%), Postives = 313/319 (98.12%), Query Frame = 0


Query: 1   MAATATSIAALWSLRRAAQFSSFRRPLALNLNRLCFNEARFPSSPLGTSGICQLVQAVKG 60
           MAAT T+I ALWSLR A+QFSSFRRPL +NLNRL F+E RFPSSPLGTSGICQLVQAVKG
Sbjct: 1   MAATTTTIGALWSLRIASQFSSFRRPLPVNLNRLYFHETRFPSSPLGTSGICQLVQAVKG 60

Query: 61  DIDVLLNGVGDKGVIVDVKQILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLADVKA 120
           DIDVLLNGVGDKGVIVDVKQILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLADVKA
Sbjct: 61  DIDVLLNGVGDKGVIVDVKQILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLADVKA 120

Query: 121 IAQGGYPEAERCRISVGHADELTSDPDIISALSITGNFTFHPCSHGDFLGSILGTGIARE 180
           IAQGGYPEAERCRISVGH+DELTSDPDIISALSITGNFTFHPCSHGDFLGSILGTGIARE
Sbjct: 121 IAQGGYPEAERCRISVGHSDELTSDPDIISALSITGNFTFHPCSHGDFLGSILGTGIARE 180

Query: 181 KLGDIMLQEETGAQVVIVPELVDFLISSLRKVGNVTVSCTRIPLTALEYEPPKTKTFKTI 240
           KLGDI++QEETGAQVVIVPELVDFLISSLRKVGNVTVSCTRIPLTALEYEPPKTKTFKTI
Sbjct: 181 KLGDIIIQEETGAQVVIVPELVDFLISSLRKVGNVTVSCTRIPLTALEYEPPKTKTFKTI 240

Query: 241 EASLRVDAIASAGFKISRSKLVDLISSGDVRVNWTPITKNGTILKTGDIVSVSGKGRLKI 300
           EASLRVDA+ASAGFKISRSKLVDLISSGDVRVNWTPITKNGTILKTGDIVSVSGKGRLKI
Sbjct: 241 EASLRVDALASAGFKISRSKLVDLISSGDVRVNWTPITKNGTILKTGDIVSVSGKGRLKI 300

Query: 301 GEINSTKKGKFAVELIRYV 320
           GEINSTKKGKFAVELIRYV
Sbjct: 301 GEINSTKKGKFAVELIRYV 319

[Close]

BLAST of CSPI03G19410 vs. NCBI nr
Match: XP_038899605.1 (putative RNA-binding protein YlmH [Benincasa hispida])

HSP 1 Score: 560.8 bits (1444), Expect = 7.4e-156
Identity = 292/318 (91.82%), Postives = 304/318 (95.60%), Query Frame = 0


Query: 5   ATSIAALWSLRRAAQFSSFRRPLALNLNRLCFNEARF---PSSPLGTSGICQLVQAVKGD 64
           ATSI A WSLRRAAQ SSFR PLA+NLN+L F+EARF   PSSPLG+SGICQLVQAVKGD
Sbjct: 3   ATSIGARWSLRRAAQSSSFRSPLAVNLNKLSFHEARFPSSPSSPLGSSGICQLVQAVKGD 62

Query: 65  IDVLLNGVGDKGVIVDVKQILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLADVKAI 124
           IDVLLNGVGDKGVIVDVK ILVMAKRSLSRR VLHTNFLTPPVVKES+LA+QKLADVKAI
Sbjct: 63  IDVLLNGVGDKGVIVDVKHILVMAKRSLSRRVVLHTNFLTPPVVKESILALQKLADVKAI 122

Query: 125 AQGGYPEAERCRISVGHADELTSDPDIISALSITGNFTFHPCSHGDFLGSILGTGIAREK 184
           AQGGYPEAERCRISVGHADEL SDPDI+SALSITGNF FHPCSHGDFLG+ILGTGIAREK
Sbjct: 123 AQGGYPEAERCRISVGHADELLSDPDIVSALSITGNFMFHPCSHGDFLGAILGTGIAREK 182

Query: 185 LGDIMLQEETGAQVVIVPELVDFLISSLRKVGNVTVSCTRIPLTALEYEPPKTKTFKTIE 244
           LGDI+LQEE GAQVV+VPELVDFL SSLRKVGNVTVSCTRIPLTAL+YEPPKTKTFKTIE
Sbjct: 183 LGDIILQEEKGAQVVVVPELVDFLASSLRKVGNVTVSCTRIPLTALDYEPPKTKTFKTIE 242

Query: 245 ASLRVDAIASAGFKISRSKLVDLISSGDVRVNWTPITKNGTILKTGDIVSVSGKGRLKIG 304
           ASLRVDA+ASAGFKISRSKLVDLISSGDVRVNWTPITKNGTILKTGDIVSVSGKGRLKIG
Sbjct: 243 ASLRVDALASAGFKISRSKLVDLISSGDVRVNWTPITKNGTILKTGDIVSVSGKGRLKIG 302

Query: 305 EINSTKKGKFAVELIRYV 320
           EINSTKKGKFAVELIRYV
Sbjct: 303 EINSTKKGKFAVELIRYV 320

[Close]

BLAST of CSPI03G19410 vs. NCBI nr
Match: XP_022142743.1 (uncharacterized protein LOC111012786 isoform X1 [Momordica charantia])

HSP 1 Score: 556.2 bits (1432), Expect = 1.8e-154
Identity = 293/318 (92.14%), Postives = 303/318 (95.28%), Query Frame = 0


Query: 5   ATSIAALWSLRRAAQFSSFRRPLALNLNRLCFNEARF---PSSPLGTSGICQLVQAVKGD 64
           ATSI ALWSLRRAAQ SSFR PLALNL+   F++ARF   PSSP G+SGICQLVQAVKGD
Sbjct: 3   ATSIGALWSLRRAAQASSFRIPLALNLS---FHQARFPPSPSSPPGSSGICQLVQAVKGD 62

Query: 65  IDVLLNGVGDKGVIVDVKQILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLADVKAI 124
           IDVLLNGVGDKGVIVDVK ILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLADVKAI
Sbjct: 63  IDVLLNGVGDKGVIVDVKHILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLADVKAI 122

Query: 125 AQGGYPEAERCRISVGHADELTSDPDIISALSITGNFTFHPCSHGDFLGSILGTGIAREK 184
           AQGGYPEAERCRISVGHADELTSDPDIISALSITGNFTFHPCSHGDFLGSILGTGIAREK
Sbjct: 123 AQGGYPEAERCRISVGHADELTSDPDIISALSITGNFTFHPCSHGDFLGSILGTGIAREK 182

Query: 185 LGDIMLQEETGAQVVIVPELVDFLISSLRKVGNVTVSCTRIPLTALEYEPPKTKTFKTIE 244
           LGDI+LQ E GAQVV+VPELVDFLISSLRKVGNVTVSCTRIPLTAL+YEPPKTKTF TIE
Sbjct: 183 LGDIILQGENGAQVVLVPELVDFLISSLRKVGNVTVSCTRIPLTALDYEPPKTKTFNTIE 242

Query: 245 ASLRVDAIASAGFKISRSKLVDLISSGDVRVNWTPITKNGTILKTGDIVSVSGKGRLKIG 304
           ASLRVDAIASAGFKISRSKLVDLISSGDVRVNWTP+TKNGT LKTGD+VSVSGKGRLKIG
Sbjct: 243 ASLRVDAIASAGFKISRSKLVDLISSGDVRVNWTPVTKNGTTLKTGDVVSVSGKGRLKIG 302

Query: 305 EINSTKKGKFAVELIRYV 320
           EINSTKKGKF+VELIRYV
Sbjct: 303 EINSTKKGKFSVELIRYV 317

[Close]

BLAST of CSPI03G19410 vs. NCBI nr
Match: KAG6600381.1 (hypothetical protein SDJN03_05614, partial [Cucurbita argyrosperma subsp. sororia] >KAG7031043.1 ylmH [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 552.0 bits (1421), Expect = 3.4e-153
Identity = 286/322 (88.82%), Postives = 301/322 (93.48%), Query Frame = 0


Query: 1   MAATATSIAALWSLRRAAQFSSFRRPLALNLNRLCFNEARF---PSSPLGTSGICQLVQA 60
           MAA   SI ALWSLRRAAQ SSFR PLA+NL ++ F+EARF   PSSPLG SG+CQLVQA
Sbjct: 1   MAAATASIGALWSLRRAAQSSSFRTPLAINLGKVSFHEARFPSSPSSPLGASGMCQLVQA 60

Query: 61  VKGDIDVLLNGVGDKGVIVDVKQILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLAD 120
           VKGDIDVLLNGVGDKGVIVDVK ILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLAD
Sbjct: 61  VKGDIDVLLNGVGDKGVIVDVKHILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLAD 120

Query: 121 VKAIAQGGYPEAERCRISVGHADELTSDPDIISALSITGNFTFHPCSHGDFLGSILGTGI 180
           VKAIAQGGYPEAERCRISVGHADELTSDPD++SALSITGNF FH C+HGDFLG+ILGTGI
Sbjct: 121 VKAIAQGGYPEAERCRISVGHADELTSDPDVVSALSITGNFVFHTCTHGDFLGAILGTGI 180

Query: 181 AREKLGDIMLQEETGAQVVIVPELVDFLISSLRKVGNVTVSCTRIPLTALEYEPPKTKTF 240
           AREKLGDI+LQEE GAQVVIVPELVDFL+SSLRKVGNVTVSCTRIPLT L+YEPPKTKTF
Sbjct: 181 AREKLGDIILQEEKGAQVVIVPELVDFLVSSLRKVGNVTVSCTRIPLTDLDYEPPKTKTF 240

Query: 241 KTIEASLRVDAIASAGFKISRSKLVDLISSGDVRVNWTPITKNGTILKTGDIVSVSGKGR 300
           KTIEASLRVDA+ASAGFKISRSKLVD IS GDVRVNWT ITKNGTILKTGDIVSVSGKGR
Sbjct: 241 KTIEASLRVDALASAGFKISRSKLVDFISGGDVRVNWTTITKNGTILKTGDIVSVSGKGR 300

Query: 301 LKIGEINSTKKGKFAVELIRYV 320
           LKIGEIN TKKGKFA+ELI+YV
Sbjct: 301 LKIGEINPTKKGKFAIELIKYV 322

[Close]

BLAST of CSPI03G19410 vs. TAIR 10
Match: AT1G53120.1 (RNA-binding S4 domain-containing protein )

HSP 1 Score: 423.3 bits (1087), Expect = 1.7e-118
Identity = 218/318 (68.55%), Postives = 263/318 (82.70%), Query Frame = 0


Query: 6   TSIAALWSLRRAAQFSSFRRPLALNLNR--LCFNEARFPSSPLGTSGI--CQLVQAVKGD 65
           TS+A  W + R A F S      L+ N+  L  N +   S PL  S +  C   +A+KGD
Sbjct: 4   TSLAPPWVILRLA-FRSVAASSCLHTNQKTLITNLSIPTSFPLRQSALRRCYSAEAIKGD 63

Query: 66  IDVLLNGVGDKGVIVDVKQILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLADVKAI 125
           +D LL GVGD+ V  +VKQIL MA+R+ S+REVLHT+FLTPP+VKES+  ++K ADVK +
Sbjct: 64  VDFLLKGVGDQAVAKEVKQILEMARRASSKREVLHTDFLTPPIVKESVSLLEKFADVKIV 123

Query: 126 AQGGYPEAERCRISVGHADELTSDPDIISALSITGNFTFHPCSHGDFLGSILGTGIAREK 185
           AQGGYPEAERCRIS+GH D LTSDPDI++ALSITGNF F PCSHGDFLG+ILGTGI+REK
Sbjct: 124 AQGGYPEAERCRISIGHPDVLTSDPDIVAALSITGNFGFQPCSHGDFLGAILGTGISREK 183

Query: 186 LGDIMLQEETGAQVVIVPELVDFLISSLRKVGNVTVSCTRIPLTALEYEPPKTKTFKTIE 245
           LGDI++QEE GAQV+IVPELVDF++++L KVGNV V+C++IPL ALEYEPP+T +FKT+E
Sbjct: 184 LGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEYEPPRTNSFKTVE 243

Query: 246 ASLRVDAIASAGFKISRSKLVDLISSGDVRVNWTPITKNGTILKTGDIVSVSGKGRLKIG 305
           ASLR+DA+ASAGFKISRSKLVDLISS DVRVNW  +TKNGTI+KTGD+VSVSGKGRLKIG
Sbjct: 244 ASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDVVSVSGKGRLKIG 303

Query: 306 EINSTKKGKFAVELIRYV 320
           EIN TKKGKFAVE+IRY+
Sbjct: 304 EINETKKGKFAVEIIRYL 320

The following BLAST results are available for this feature:

BLAST of CSPI03G19410 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P71020	3.0e-19	30.67	Putative RNA-binding protein YlmH OS=Bacillus subtilis (strain 168) OX=224308 GN...	[more]

BLAST of CSPI03G19410 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LC56	1.1e-170	99.69	S4 RNA-binding domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G233...	[more]
A0A1S3C3I2	1.6e-164	95.61	putative RNA-binding protein YlmH isoform X2 OS=Cucumis melo OX=3656 GN=LOC10349...	[more]
A0A6J1CP18	8.8e-155	92.14	uncharacterized protein LOC111012786 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1CLT4	6.3e-153	91.82	uncharacterized protein LOC111012786 isoform X2 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1J103	1.1e-152	88.82	uncharacterized protein LOC111480897 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of CSPI03G19410 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004146247.1	2.4e-170	99.69	uncharacterized protein LOC101221944 [Cucumis sativus] >XP_031738291.1 uncharact...	[more]
XP_008456024.1	3.3e-164	95.61	PREDICTED: putative RNA-binding protein YlmH isoform X2 [Cucumis melo]	[more]
XP_038899605.1	7.4e-156	91.82	putative RNA-binding protein YlmH [Benincasa hispida]	[more]
XP_022142743.1	1.8e-154	92.14	uncharacterized protein LOC111012786 isoform X1 [Momordica charantia]	[more]
KAG6600381.1	3.4e-153	88.82	hypothetical protein SDJN03_05614, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of CSPI03G19410 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G53120.1	1.7e-118	68.55	RNA-binding S4 domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002942	RNA-binding S4 domain	SMART	SM00363	s4_6	coord: 244..304 e-value: 1.3E-10 score: 51.3
IPR002942	RNA-binding S4 domain	PFAM	PF01479	S4	coord: 245..290 e-value: 5.2E-8 score: 32.5
IPR002942	RNA-binding S4 domain	CDD	cd00165	S4	coord: 245..299 e-value: 1.26903E-10 score: 54.563
None	No IPR available	GENE3D	3.30.1370.160		coord: 75..137 e-value: 4.5E-5 score: 25.3
None	No IPR available	PANTHER	PTHR32219	RNA-BINDING PROTEIN YLMH-RELATED	coord: 50..319
None	No IPR available	PANTHER	PTHR32219:SF3	RNA-BINDING PROTEIN YLMH-RELATED	coord: 50..319
None	No IPR available	PROSITE	PS50889	S4	coord: 244..304 score: 13.476096
None	No IPR available	SUPERFAMILY	55174	Alpha-L RNA-binding motif	coord: 126..307
IPR017506	Photosystem II S4	TIGRFAM	TIGR03069	TIGR03069	coord: 77..317 e-value: 4.1E-95 score: 315.7
IPR040591	YlmH, putative RNA-binding domain	PFAM	PF17774	YlmH_RBD	coord: 150..225 e-value: 1.2E-13 score: 51.2
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 145..227 e-value: 8.5E-22 score: 78.8
IPR036986	RNA-binding S4 domain superfamily	GENE3D	3.10.290.10		coord: 236..295 e-value: 1.3E-7 score: 33.0

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G19410.1	CSPI03G19410.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding