CSPI03G19090 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI03G19090
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Ferredoxin
Location	Chr3: 14841980 .. 14843076 (+)
RNA-Seq Expression	CSPI03G19090
Synteny	CSPI03G19090

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTCACATTTTGAAACCAAATCTTTGGAAGGATAAGAATCCACAACCATTACCATTCATTGCCAAAAGATAAGGCGTTAACTCACATCCACACGCTCTCTATTTCACTCTCCACGTTATAGCCACACGACCCAAAAATCCTCTTTAAAAAACCCTCTTCACTCTCTCAATTCCATTTCATCTCATCTCATCTCCAATCCAACACAAGAACAATAAGAAAAATGAGCAGCACCACTGCAATCACCTCCCCATTTCCGGCCACCTCCTTCATCCGTCGGAATCCTACCGGTGGAGTGAGTTTCAAGCCATTTCCCAACATGGGTGAGTCTCTGTACGGGCTGAAACACCGCGGCGGACGACTGGCGATGAAGGCATACAAGGTGAAACTCATAACCCCAGATGGAGAGAAAACGGTTGAATGTGATGCTGATCTTTACATTTTGGATGCGGCTGAGGAAAGTGGGCTTGATCTTCCTTACTCTTGCAGAGCTGGGGCTTGTTCTTCATGCGTTGGGAAAGTGGTATCAGGGAAATTGGATCAATCTGATCAGAGTTTTCTTGATGATGAGCAAGTGGCTGAAGGTTGGGTTTTAACTTGTGTTGCTAGGCCTGAGTCTGATCTTGTAATTGAGACTCACAAGGAGGATTCCTTTGCTGGTTAAAACAGAGGAACAAGAAGGGATTAAACTTATTTTTTCTTTTTATCTTTTCTATCTTTGTTGATGAGAGTAAGCATAATGGACATTGTTTTCTTAGCTTGATGATGATGATGATGATGATGATGATATCTCTCTTTTAAAGTGTTTGTTGAAAATTGTATTGTTCATTACTGGTTTAAGTTTATTTACAACTCGGGTTTTGTTTATCTGTTGTTGGGTTCTTAACTTTCATTTCTTTTTGGCTTCTTTACTTTCATGTGAATGATACTGTCTTTTAGCTTCACGTATATCACTTTAGCTCTCCATTGTAAATCATTTTGTTTATTGTTTTATTTATATGTTGTTGGGTGGTTGTTATTTATTTCTCTTTGATATCCAAGTTGTGAATGATACTATAGATTAATCCATCTTTATTTTGGGGAATGGTAAAAAATAGTCC

mRNA sequence

GTTCACATTTTGAAACCAAATCTTTGGAAGGATAAGAATCCACAACCATTACCATTCATTGCCAAAAGATAAGGCGTTAACTCACATCCACACGCTCTCTATTTCACTCTCCACGTTATAGCCACACGACCCAAAAATCCTCTTTAAAAAACCCTCTTCACTCTCTCAATTCCATTTCATCTCATCTCATCTCCAATCCAACACAAGAACAATAAGAAAAATGAGCAGCACCACTGCAATCACCTCCCCATTTCCGGCCACCTCCTTCATCCGTCGGAATCCTACCGGTGGAGTGAGTTTCAAGCCATTTCCCAACATGGGTGAGTCTCTGTACGGGCTGAAACACCGCGGCGGACGACTGGCGATGAAGGCATACAAGGTGAAACTCATAACCCCAGATGGAGAGAAAACGGTTGAATGTGATGCTGATCTTTACATTTTGGATGCGGCTGAGGAAAGTGGGCTTGATCTTCCTTACTCTTGCAGAGCTGGGGCTTGTTCTTCATGCGTTGGGAAAGTGGTATCAGGGAAATTGGATCAATCTGATCAGAGTTTTCTTGATGATGAGCAAGTGGCTGAAGGTTGGGTTTTAACTTGTGTTGCTAGGCCTGAGTCTGATCTTGTAATTGAGACTCACAAGGAGGATTCCTTTGCTGGTTAAAACAGAGGAACAAGAAGGGATTAAACTTATTTTTTCTTTTTATCTTTTCTATCTTTGTTGATGAGAGTAAGCATAATGGACATTGTTTTCTTAGCTTGATGATGATGATGATGATGATGATGATATCTCTCTTTTAAAGTGTTTGTTGAAAATTGTATTGTTCATTACTGGTTTAAGTTTATTTACAACTCGGGTTTTGTTTATCTGTTGTTGGGTTCTTAACTTTCATTTCTTTTTGGCTTCTTTACTTTCATGTGAATGATACTGTCTTTTAGCTTCACGTATATCACTTTAGCTCTCCATTGTAAATCATTTTGTTTATTGTTTTATTTATATGTTGTTGGGTGGTTGTTATTTATTTCTCTTTGATATCCAAGTTGTGAATGATACTATAGATTAATCCATCTTTATTTTGGGGAATGGTAAAAAATAGTCC

Coding sequence (CDS)

ATGAGCAGCACCACTGCAATCACCTCCCCATTTCCGGCCACCTCCTTCATCCGTCGGAATCCTACCGGTGGAGTGAGTTTCAAGCCATTTCCCAACATGGGTGAGTCTCTGTACGGGCTGAAACACCGCGGCGGACGACTGGCGATGAAGGCATACAAGGTGAAACTCATAACCCCAGATGGAGAGAAAACGGTTGAATGTGATGCTGATCTTTACATTTTGGATGCGGCTGAGGAAAGTGGGCTTGATCTTCCTTACTCTTGCAGAGCTGGGGCTTGTTCTTCATGCGTTGGGAAAGTGGTATCAGGGAAATTGGATCAATCTGATCAGAGTTTTCTTGATGATGAGCAAGTGGCTGAAGGTTGGGTTTTAACTTGTGTTGCTAGGCCTGAGTCTGATCTTGTAATTGAGACTCACAAGGAGGATTCCTTTGCTGGTTAA

Protein sequence

MSSTTAITSPFPATSFIRRNPTGGVSFKPFPNMGESLYGLKHRGGRLAMKAYKVKLITPDGEKTVECDADLYILDAAEESGLDLPYSCRAGACSSCVGKVVSGKLDQSDQSFLDDEQVAEGWVLTCVARPESDLVIETHKEDSFAG*

Homology

[Close]

BLAST of CSPI03G19090 vs. ExPASy Swiss-Prot
Match: O04090 (Ferredoxin-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FD1 PE=1 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 1.1e-45
Identity = 94/146 (64.38%), Postives = 118/146 (80.82%), Query Frame = 0


Query: 3   STTAITSPFPATSFIRRNPTG-GVSFKPFPNMGESLYGLKH---RGGRL-AMKAYKVKLI 62
           ++TA++S   +TSF+RR  T   +   PF N  +SL+GLK    RGGR+ AM  YKVK I
Sbjct: 2   ASTALSSAIVSTSFLRRQQTPISLRSLPFANT-QSLFGLKSSTARGGRVTAMATYKVKFI 61

Query: 63  TPDGEKTVECDADLYILDAAEESGLDLPYSCRAGACSSCVGKVVSGKLDQSDQSFLDDEQ 122
           TP+GE+ VEC+ D+Y+LDAAEE+GLDLPYSCRAG+CSSC GKVVSG +DQSDQSFLDDEQ
Sbjct: 62  TPEGEQEVECEEDVYVLDAAEEAGLDLPYSCRAGSCSSCAGKVVSGSIDQSDQSFLDDEQ 121

Query: 123 VAEGWVLTCVARPESDLVIETHKEDS 144
           ++EG+VLTCVA P SD+VIETHKE++
Sbjct: 122 MSEGYVLTCVAYPTSDVVIETHKEEA 146

[Close]

BLAST of CSPI03G19090 vs. ExPASy Swiss-Prot
Match: P16972 (Ferredoxin-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FD2 PE=1 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 5.6e-45
Identity = 92/145 (63.45%), Postives = 114/145 (78.62%), Query Frame = 0


Query: 3   STTAITSPFPATSFIRRNPTGGVSFKPFPNMG-ESLYGLKH---RGGRL-AMKAYKVKLI 62
           ++TA++S    TSFIRR+P   +S +  P+   +SL+GLK    RGGR+ AM  YKVK I
Sbjct: 2   ASTALSSAIVGTSFIRRSP-APISLRSLPSANTQSLFGLKSGTARGGRVTAMATYKVKFI 61

Query: 63  TPDGEKTVECDADLYILDAAEESGLDLPYSCRAGACSSCVGKVVSGKLDQSDQSFLDDEQ 122
           TP+GE  VECD D+Y+LDAAEE+G+DLPYSCRAG+CSSC GKVVSG +DQSDQSFLDDEQ
Sbjct: 62  TPEGELEVECDDDVYVLDAAEEAGIDLPYSCRAGSCSSCAGKVVSGSVDQSDQSFLDDEQ 121

Query: 123 VAEGWVLTCVARPESDLVIETHKED 143
           + EG+VLTC A P SD+ IETHKE+
Sbjct: 122 IGEGFVLTCAAYPTSDVTIETHKEE 145

[Close]

BLAST of CSPI03G19090 vs. ExPASy Swiss-Prot
Match: Q9ZTS2 (Ferredoxin, chloroplastic OS=Capsicum annuum OX=4072 GN=AP1 PE=1 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 4.9e-41
Identity = 81/143 (56.64%), Postives = 106/143 (74.13%), Query Frame = 0


Query: 6   AITSPFPATSFIRRNPTGGVSFKPFPNMGESLYGLKH-RGGRL-AMKAYKVKLITPDGEK 65
           ++++   +TSF+ R P    S KP PN+GE+L+GLK   GG++  M +YKVKLITPDG  
Sbjct: 3   SVSATMISTSFMPRKP-AVTSLKPIPNVGEALFGLKSANGGKVTCMASYKVKLITPDGPI 62

Query: 66  TVECDADLYILDAAEESGLDLPYSCRAGACSSCVGKVVSGKLDQSDQSFLDDEQVAEGWV 125
             +C  ++YILD AEE+G DLPYSCRAG+CSSC GK+  G +DQ+D +FLDD+Q+ EGWV
Sbjct: 63  EFDCPDNVYILDQAEEAGHDLPYSCRAGSCSSCAGKIAGGAVDQTDGNFLDDDQLEEGWV 122

Query: 126 LTCVARPESDLVIETHKEDSFAG 147
           LTCVA P+SD+ IETHKE    G
Sbjct: 123 LTCVAYPQSDVTIETHKEAELVG 144

[Close]

BLAST of CSPI03G19090 vs. ExPASy Swiss-Prot
Match: O04683 (Ferredoxin-1, chloroplastic OS=Mesembryanthemum crystallinum OX=3544 PE=2 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 1.0e-38
Identity = 78/144 (54.17%), Postives = 104/144 (72.22%), Query Frame = 0


Query: 2   SSTTAITSPFPATSFIRRNPTGGVSFKPFPNMGESLYGLK---HRGGRLAMKAYKVKLIT 61
           ++T A++    +T+F  + P    +     N+G +L+GLK    RG   AM AYKV L+T
Sbjct: 3   ATTAALSGATMSTAFAPKTPPMTAALP--TNVGRALFGLKSSASRGRVTAMAAYKVTLVT 62

Query: 62  PDGEKTVECDADLYILDAAEESGLDLPYSCRAGACSSCVGKVVSGKLDQSDQSFLDDEQV 121
           P+G++ +EC  D+YILDAAEE+G+DLPYSCRAG+CSSC GKV SG ++Q D SFLDD+Q+
Sbjct: 63  PEGKQELECPDDVYILDAAEEAGIDLPYSCRAGSCSSCAGKVTSGSVNQDDGSFLDDDQI 122

Query: 122 AEGWVLTCVARPESDLVIETHKED 143
            EGWVLTCVA P  D+ IETHKE+
Sbjct: 123 KEGWVLTCVAYPTGDVTIETHKEE 144

[Close]

BLAST of CSPI03G19090 vs. ExPASy Swiss-Prot
Match: P00221 (Ferredoxin-1, chloroplastic OS=Spinacia oleracea OX=3562 GN=PETF PE=1 SV=2)

HSP 1 Score: 160.6 bits (405), Expect = 1.3e-38
Identity = 79/142 (55.63%), Postives = 98/142 (69.01%), Query Frame = 0


Query: 3   STTAITSPFPATSFIRRNPTGGVSFKPFPNMGESLYGLK--HRGGRLAMKAYKVKLITPD 62
           + T  T    AT+F+ +     +      N G SL+GLK   RGGR+ M AYKV L+TP 
Sbjct: 2   AATTTTMMGMATTFVPKPQAPPMMAALPSNTGRSLFGLKTGSRGGRMTMAAYKVTLVTPT 61

Query: 63  GEKTVECDADLYILDAAEESGLDLPYSCRAGACSSCVGKVVSGKLDQSDQSFLDDEQVAE 122
           G    +C  D+YILDAAEE G+DLPYSCRAG+CSSC GK+ +G L+Q DQSFLDD+Q+ E
Sbjct: 62  GNVEFQCPDDVYILDAAEEEGIDLPYSCRAGSCSSCAGKLKTGSLNQDDQSFLDDDQIDE 121

Query: 123 GWVLTCVARPESDLVIETHKED 143
           GWVLTC A P SD+ IETHKE+
Sbjct: 122 GWVLTCAAYPVSDVTIETHKEE 143

[Close]

BLAST of CSPI03G19090 vs. ExPASy TrEMBL
Match: A0A0A0L764 (Ferredoxin OS=Cucumis sativus OX=3659 GN=Csa_3G222800 PE=3 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 4.0e-78
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0


Query: 1   MSSTTAITSPFPATSFIRRNPTGGVSFKPFPNMGESLYGLKHRGGRLAMKAYKVKLITPD 60
           MSSTTAITSPFPATSFIRRNPTGGVSFKPFPNMGESLYGLKHRGGRLAMKAYKVKLITPD
Sbjct: 1   MSSTTAITSPFPATSFIRRNPTGGVSFKPFPNMGESLYGLKHRGGRLAMKAYKVKLITPD 60

Query: 61  GEKTVECDADLYILDAAEESGLDLPYSCRAGACSSCVGKVVSGKLDQSDQSFLDDEQVAE 120
           GEKTVECDADLYILDAAEESGLDLPYSCRAGACSSCVGKVVSGKLDQSDQSFLDDEQVAE
Sbjct: 61  GEKTVECDADLYILDAAEESGLDLPYSCRAGACSSCVGKVVSGKLDQSDQSFLDDEQVAE 120

Query: 121 GWVLTCVARPESDLVIETHKEDSFAG 147
           GWVLTCVARPESDLVIETHKEDSFAG
Sbjct: 121 GWVLTCVARPESDLVIETHKEDSFAG 146

[Close]

BLAST of CSPI03G19090 vs. ExPASy TrEMBL
Match: A0A5A7TBH5 (Ferredoxin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold227G00090 PE=3 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 3.5e-66
Identity = 122/146 (83.56%), Postives = 133/146 (91.10%), Query Frame = 0


Query: 1   MSSTTAITSPFPATSFIRRNPTGGVSFKPFPNMGESLYGLKHRGGRLAMKAYKVKLITPD 60
           M STTA TSPFPATSF+RRNPTGGVS KPFPNMGESL+GLKHRGGR+   AY VKLITP+
Sbjct: 1   MGSTTAFTSPFPATSFLRRNPTGGVSLKPFPNMGESLFGLKHRGGRVTAMAYNVKLITPE 60

Query: 61  GEKTVECDADLYILDAAEESGLDLPYSCRAGACSSCVGKVVSGKLDQSDQSFLDDEQVAE 120
           GEK++ C  D YILDAAEE+G+DLPYSCRAGACSSC+GKVVSGKLDQSDQSFLDD+QVAE
Sbjct: 61  GEKSITCPDDAYILDAAEENGIDLPYSCRAGACSSCIGKVVSGKLDQSDQSFLDDDQVAE 120

Query: 121 GWVLTCVARPESDLVIETHKEDSFAG 147
           GWVLTCVAR ESD+VIETHKED FAG
Sbjct: 121 GWVLTCVARAESDVVIETHKEDVFAG 146

[Close]

BLAST of CSPI03G19090 vs. ExPASy TrEMBL
Match: A0A1S3C1X0 (Ferredoxin OS=Cucumis melo OX=3656 GN=LOC103496100 PE=3 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 3.5e-66
Identity = 122/146 (83.56%), Postives = 133/146 (91.10%), Query Frame = 0


Query: 1   MSSTTAITSPFPATSFIRRNPTGGVSFKPFPNMGESLYGLKHRGGRLAMKAYKVKLITPD 60
           M STTA TSPFPATSF+RRNPTGGVS KPFPNMGESL+GLKHRGGR+   AY VKLITP+
Sbjct: 1   MGSTTAFTSPFPATSFLRRNPTGGVSLKPFPNMGESLFGLKHRGGRVTAMAYNVKLITPE 60

Query: 61  GEKTVECDADLYILDAAEESGLDLPYSCRAGACSSCVGKVVSGKLDQSDQSFLDDEQVAE 120
           GEK++ C  D YILDAAEE+G+DLPYSCRAGACSSC+GKVVSGKLDQSDQSFLDD+QVAE
Sbjct: 61  GEKSITCPDDAYILDAAEENGIDLPYSCRAGACSSCIGKVVSGKLDQSDQSFLDDDQVAE 120

Query: 121 GWVLTCVARPESDLVIETHKEDSFAG 147
           GWVLTCVAR ESD+VIETHKED FAG
Sbjct: 121 GWVLTCVARAESDVVIETHKEDVFAG 146

[Close]

BLAST of CSPI03G19090 vs. ExPASy TrEMBL
Match: A0A6J1J1D5 (Ferredoxin OS=Cucurbita maxima OX=3661 GN=LOC111481826 PE=3 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 4.8e-55
Identity = 106/149 (71.14%), Postives = 126/149 (84.56%), Query Frame = 0


Query: 1   MSSTTAITSPFPATSFIRR-NPTGGVSFKPFPNMGESLYGLK---HRGGRLAMKAYKVKL 60
           M STTA+T+P P TSF+RR  P  GVS +PFPN+G+SL+GLK    RGG + + AYKVKL
Sbjct: 1   MGSTTALTAPIPVTSFLRRQQPVTGVSLRPFPNVGQSLFGLKLGSSRGGSMTVMAYKVKL 60

Query: 61  ITPDGEKTVECDADLYILDAAEESGLDLPYSCRAGACSSCVGKVVSGKLDQSDQSFLDDE 120
           ITP+GEK +EC  D YILDAAEESG+DLPYSCRAGACSSC+GK+ SGK+DQSD SFLDD+
Sbjct: 61  ITPEGEKEIECSGDDYILDAAEESGVDLPYSCRAGACSSCIGKLKSGKVDQSDNSFLDDQ 120

Query: 121 QVAEGWVLTCVARPESDLVIETHKEDSFA 146
           Q+ +GWVLTCVARPESD+VIETHKE+ FA
Sbjct: 121 QMEDGWVLTCVARPESDIVIETHKEEVFA 149

[Close]

BLAST of CSPI03G19090 vs. ExPASy TrEMBL
Match: A0A6J1FPZ2 (Ferredoxin OS=Cucurbita moschata OX=3662 GN=LOC111447172 PE=3 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 4.8e-55
Identity = 106/149 (71.14%), Postives = 126/149 (84.56%), Query Frame = 0


Query: 1   MSSTTAITSPFPATSFIRR-NPTGGVSFKPFPNMGESLYGLK---HRGGRLAMKAYKVKL 60
           M STTA+T+P P TSF+RR  P  GVS +PFPN+G+SL+GLK    RGG + + AYKVKL
Sbjct: 1   MGSTTALTAPIPVTSFLRRQQPVTGVSLRPFPNVGQSLFGLKLGSSRGGSMTVMAYKVKL 60

Query: 61  ITPDGEKTVECDADLYILDAAEESGLDLPYSCRAGACSSCVGKVVSGKLDQSDQSFLDDE 120
           ITP+GEK +EC  D YILDAAEESG+DLPYSCRAGACSSC+GK+ SGK+DQSD SFLDD+
Sbjct: 61  ITPEGEKEIECSGDDYILDAAEESGVDLPYSCRAGACSSCIGKLKSGKVDQSDNSFLDDQ 120

Query: 121 QVAEGWVLTCVARPESDLVIETHKEDSFA 146
           Q+ +GWVLTCVARPESD+VIETHKE+ FA
Sbjct: 121 QMEDGWVLTCVARPESDIVIETHKEEVFA 149

[Close]

BLAST of CSPI03G19090 vs. NCBI nr
Match: XP_004146259.1 (ferredoxin, leaf L-A [Cucumis sativus] >KGN57598.1 hypothetical protein Csa_011051 [Cucumis sativus])

HSP 1 Score: 300.4 bits (768), Expect = 8.3e-78
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0


Query: 1   MSSTTAITSPFPATSFIRRNPTGGVSFKPFPNMGESLYGLKHRGGRLAMKAYKVKLITPD 60
           MSSTTAITSPFPATSFIRRNPTGGVSFKPFPNMGESLYGLKHRGGRLAMKAYKVKLITPD
Sbjct: 1   MSSTTAITSPFPATSFIRRNPTGGVSFKPFPNMGESLYGLKHRGGRLAMKAYKVKLITPD 60

Query: 61  GEKTVECDADLYILDAAEESGLDLPYSCRAGACSSCVGKVVSGKLDQSDQSFLDDEQVAE 120
           GEKTVECDADLYILDAAEESGLDLPYSCRAGACSSCVGKVVSGKLDQSDQSFLDDEQVAE
Sbjct: 61  GEKTVECDADLYILDAAEESGLDLPYSCRAGACSSCVGKVVSGKLDQSDQSFLDDEQVAE 120

Query: 121 GWVLTCVARPESDLVIETHKEDSFAG 147
           GWVLTCVARPESDLVIETHKEDSFAG
Sbjct: 121 GWVLTCVARPESDLVIETHKEDSFAG 146

[Close]

BLAST of CSPI03G19090 vs. NCBI nr
Match: XP_008456052.1 (PREDICTED: ferredoxin-like [Cucumis melo] >KAA0038971.1 ferredoxin-like [Cucumis melo var. makuwa] >TYK11176.1 ferredoxin-like [Cucumis melo var. makuwa])

HSP 1 Score: 260.8 bits (665), Expect = 7.3e-66
Identity = 122/146 (83.56%), Postives = 133/146 (91.10%), Query Frame = 0


Query: 1   MSSTTAITSPFPATSFIRRNPTGGVSFKPFPNMGESLYGLKHRGGRLAMKAYKVKLITPD 60
           M STTA TSPFPATSF+RRNPTGGVS KPFPNMGESL+GLKHRGGR+   AY VKLITP+
Sbjct: 1   MGSTTAFTSPFPATSFLRRNPTGGVSLKPFPNMGESLFGLKHRGGRVTAMAYNVKLITPE 60

Query: 61  GEKTVECDADLYILDAAEESGLDLPYSCRAGACSSCVGKVVSGKLDQSDQSFLDDEQVAE 120
           GEK++ C  D YILDAAEE+G+DLPYSCRAGACSSC+GKVVSGKLDQSDQSFLDD+QVAE
Sbjct: 61  GEKSITCPDDAYILDAAEENGIDLPYSCRAGACSSCIGKVVSGKLDQSDQSFLDDDQVAE 120

Query: 121 GWVLTCVARPESDLVIETHKEDSFAG 147
           GWVLTCVAR ESD+VIETHKED FAG
Sbjct: 121 GWVLTCVARAESDVVIETHKEDVFAG 146

[Close]

BLAST of CSPI03G19090 vs. NCBI nr
Match: XP_038905955.1 (ferredoxin-like [Benincasa hispida])

HSP 1 Score: 245.7 bits (626), Expect = 2.4e-61
Identity = 115/149 (77.18%), Postives = 131/149 (87.92%), Query Frame = 0


Query: 1   MSSTTAITSPFPATSFIRRNPTGGVSFKPFPNMGESLYGLKH---RGGRLAMKAYKVKLI 60
           M STTA T+PFPA SF+RRNP GGVS KPFPN+G+SL+GLKH   RGGR+   AY + LI
Sbjct: 1   MGSTTAFTAPFPAASFLRRNPAGGVSLKPFPNVGQSLFGLKHGSSRGGRVTAMAYNITLI 60

Query: 61  TPDGEKTVECDADLYILDAAEESGLDLPYSCRAGACSSCVGKVVSGKLDQSDQSFLDDEQ 120
           TP+GEK++ C +D+YILDAAEE+GLDLPYSCRAGACSSCVGKVVSG LDQSD SFLDD+Q
Sbjct: 61  TPEGEKSITCTSDVYILDAAEEAGLDLPYSCRAGACSSCVGKVVSGTLDQSDNSFLDDDQ 120

Query: 121 VAEGWVLTCVARPESDLVIETHKEDSFAG 147
           +A+GWVLTCVARPESDLVIETHKED FAG
Sbjct: 121 MAQGWVLTCVARPESDLVIETHKEDVFAG 149

[Close]

BLAST of CSPI03G19090 vs. NCBI nr
Match: XP_022941964.1 (ferredoxin-like [Cucurbita moschata] >XP_022983176.1 ferredoxin-like [Cucurbita maxima] >XP_023547581.1 ferredoxin-like [Cucurbita pepo subsp. pepo] >KAG6600367.1 Ferredoxin-2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7031026.1 Ferredoxin-2, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 223.8 bits (569), Expect = 9.8e-55
Identity = 106/149 (71.14%), Postives = 126/149 (84.56%), Query Frame = 0


Query: 1   MSSTTAITSPFPATSFIRR-NPTGGVSFKPFPNMGESLYGLK---HRGGRLAMKAYKVKL 60
           M STTA+T+P P TSF+RR  P  GVS +PFPN+G+SL+GLK    RGG + + AYKVKL
Sbjct: 1   MGSTTALTAPIPVTSFLRRQQPVTGVSLRPFPNVGQSLFGLKLGSSRGGSMTVMAYKVKL 60

Query: 61  ITPDGEKTVECDADLYILDAAEESGLDLPYSCRAGACSSCVGKVVSGKLDQSDQSFLDDE 120
           ITP+GEK +EC  D YILDAAEESG+DLPYSCRAGACSSC+GK+ SGK+DQSD SFLDD+
Sbjct: 61  ITPEGEKEIECSGDDYILDAAEESGVDLPYSCRAGACSSCIGKLKSGKVDQSDNSFLDDQ 120

Query: 121 QVAEGWVLTCVARPESDLVIETHKEDSFA 146
           Q+ +GWVLTCVARPESD+VIETHKE+ FA
Sbjct: 121 QMEDGWVLTCVARPESDIVIETHKEEVFA 149

[Close]

BLAST of CSPI03G19090 vs. NCBI nr
Match: XP_022136604.1 (ferredoxin-like [Momordica charantia])

HSP 1 Score: 218.0 bits (554), Expect = 5.4e-53
Identity = 105/148 (70.95%), Postives = 122/148 (82.43%), Query Frame = 0


Query: 1   MSSTTAITSPFPATSFIRRNPTGGVSFKPFPNMGESLYGLK--HRGGRLAMKAYKVKLIT 60
           M STTA++ P PATSF+R  P  G+  +PFPNMG+ ++GLK   RGGR+   AYKV LIT
Sbjct: 1   MGSTTALSGPIPATSFLRGQPAAGL--RPFPNMGQGVFGLKGGSRGGRVRAMAYKVTLIT 60

Query: 61  PDGEKTVECDADLYILDAAEESGLDLPYSCRAGACSSCVGKVVSGKLDQSDQSFLDDEQV 120
           P GEK+V+C  D YILDAAEE GLDLPYSCRAGACSSCVGKVVSGK+DQSD SFLDD+Q+
Sbjct: 61  PSGEKSVKCPPDSYILDAAEEDGLDLPYSCRAGACSSCVGKVVSGKVDQSDNSFLDDDQM 120

Query: 121 AEGWVLTCVARPESDLVIETHKEDSFAG 147
           AEGWVLTCVA P+SD+VIETHKE  F+G
Sbjct: 121 AEGWVLTCVAYPQSDVVIETHKEGEFSG 146

[Close]

BLAST of CSPI03G19090 vs. TAIR 10
Match: AT1G10960.1 (ferredoxin 1 )

HSP 1 Score: 184.1 bits (466), Expect = 8.0e-47
Identity = 94/146 (64.38%), Postives = 118/146 (80.82%), Query Frame = 0


Query: 3   STTAITSPFPATSFIRRNPTG-GVSFKPFPNMGESLYGLKH---RGGRL-AMKAYKVKLI 62
           ++TA++S   +TSF+RR  T   +   PF N  +SL+GLK    RGGR+ AM  YKVK I
Sbjct: 2   ASTALSSAIVSTSFLRRQQTPISLRSLPFANT-QSLFGLKSSTARGGRVTAMATYKVKFI 61

Query: 63  TPDGEKTVECDADLYILDAAEESGLDLPYSCRAGACSSCVGKVVSGKLDQSDQSFLDDEQ 122
           TP+GE+ VEC+ D+Y+LDAAEE+GLDLPYSCRAG+CSSC GKVVSG +DQSDQSFLDDEQ
Sbjct: 62  TPEGEQEVECEEDVYVLDAAEEAGLDLPYSCRAGSCSSCAGKVVSGSIDQSDQSFLDDEQ 121

Query: 123 VAEGWVLTCVARPESDLVIETHKEDS 144
           ++EG+VLTCVA P SD+VIETHKE++
Sbjct: 122 MSEGYVLTCVAYPTSDVVIETHKEEA 146

[Close]

BLAST of CSPI03G19090 vs. TAIR 10
Match: AT1G60950.1 (2Fe-2S ferredoxin-like superfamily protein )

HSP 1 Score: 181.8 bits (460), Expect = 4.0e-46
Identity = 92/145 (63.45%), Postives = 114/145 (78.62%), Query Frame = 0


Query: 3   STTAITSPFPATSFIRRNPTGGVSFKPFPNMG-ESLYGLKH---RGGRL-AMKAYKVKLI 62
           ++TA++S    TSFIRR+P   +S +  P+   +SL+GLK    RGGR+ AM  YKVK I
Sbjct: 2   ASTALSSAIVGTSFIRRSP-APISLRSLPSANTQSLFGLKSGTARGGRVTAMATYKVKFI 61

Query: 63  TPDGEKTVECDADLYILDAAEESGLDLPYSCRAGACSSCVGKVVSGKLDQSDQSFLDDEQ 122
           TP+GE  VECD D+Y+LDAAEE+G+DLPYSCRAG+CSSC GKVVSG +DQSDQSFLDDEQ
Sbjct: 62  TPEGELEVECDDDVYVLDAAEEAGIDLPYSCRAGSCSSCAGKVVSGSVDQSDQSFLDDEQ 121

Query: 123 VAEGWVLTCVARPESDLVIETHKED 143
           + EG+VLTC A P SD+ IETHKE+
Sbjct: 122 IGEGFVLTCAAYPTSDVTIETHKEE 145

[Close]

BLAST of CSPI03G19090 vs. TAIR 10
Match: AT2G27510.1 (ferredoxin 3 )

HSP 1 Score: 134.0 bits (336), Expect = 9.5e-32
Identity = 66/108 (61.11%), Postives = 80/108 (74.07%), Query Frame = 0


Query: 38  YGLK---HRGGRLAMKAYKVKLITPDG-EKTVECDADLYILDAAEESGLDLPYSCRAGAC 97
           +GLK   + GG      YKVKL+ PDG E   E   D YILDAAEE+G+DLPYSCRAGAC
Sbjct: 44  FGLKCSANSGGATMSAVYKVKLLGPDGQEDEFEVQDDQYILDAAEEAGVDLPYSCRAGAC 103

Query: 98  SSCVGKVVSGKLDQSDQSFLDDEQVAEGWVLTCVARPESDLVIETHKE 142
           S+C G++VSG +DQSD SFL+D  + +G+VLTCVA P+SD VI THKE
Sbjct: 104 STCAGQIVSGNVDQSDGSFLEDSHLEKGYVLTCVAYPQSDCVIHTHKE 151

[Close]

BLAST of CSPI03G19090 vs. TAIR 10
Match: AT5G10000.1 (ferredoxin 4 )

HSP 1 Score: 114.0 bits (284), Expect = 1.0e-25
Identity = 52/99 (52.53%), Postives = 76/99 (76.77%), Query Frame = 0


Query: 44  GGRLAMKAYKVKLITPDG-EKTVECDADLYILDAAEESGLDLPYSCRAGACSSCVGKVVS 103
           G   A ++ KVKLI+P+G E+ +E + D  IL++AE +GL+LPYSCR+G C +C GK+VS
Sbjct: 46  GKVFAKESRKVKLISPEGEEQEIEGNEDCCILESAENAGLELPYSCRSGTCGTCCGKLVS 105

Query: 104 GKLDQSDQSFLDDEQVAEGWVLTCVARPESDLVIETHKE 142
           GK+DQS  SFL++EQ+ +G++LTC+A P  D V+ THK+
Sbjct: 106 GKVDQSLGSFLEEEQIQKGYILTCIALPLEDCVVYTHKQ 144

[Close]

BLAST of CSPI03G19090 vs. TAIR 10
Match: AT4G14890.1 (2Fe-2S ferredoxin-like superfamily protein )

HSP 1 Score: 76.3 bits (186), Expect = 2.4e-14
Identity = 41/99 (41.41%), Postives = 59/99 (59.60%), Query Frame = 0


Query: 45  GRLAMKAYKVKLITPDGEKT-VECDADLYILDAAEESGLDLPYSCRAGACSSCVGKVVSG 104
           GR+  +AYKV ++  DG+ T +E + D  IL  A +SGLD+PY C  G C +C  K+V+G
Sbjct: 46  GRIIARAYKV-VVEHDGKTTELEVEPDETILSKALDSGLDVPYDCNLGVCMTCPAKLVTG 105

Query: 105 KLDQSDQSFLDDEQVAEGWVLTCVARPESDLVIETHKED 143
            +DQS    L D+ V  G+ L C + P SD  I+   E+
Sbjct: 106 TVDQSG-GMLSDDVVERGYTLLCASYPTSDCHIKMIPEE 142

The following BLAST results are available for this feature:

BLAST of CSPI03G19090 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O04090	1.1e-45	64.38	Ferredoxin-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FD1 PE=1 SV=1	[more]
P16972	5.6e-45	63.45	Ferredoxin-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FD2 PE=1 SV=1	[more]
Q9ZTS2	4.9e-41	56.64	Ferredoxin, chloroplastic OS=Capsicum annuum OX=4072 GN=AP1 PE=1 SV=1	[more]
O04683	1.0e-38	54.17	Ferredoxin-1, chloroplastic OS=Mesembryanthemum crystallinum OX=3544 PE=2 SV=1	[more]
P00221	1.3e-38	55.63	Ferredoxin-1, chloroplastic OS=Spinacia oleracea OX=3562 GN=PETF PE=1 SV=2	[more]

BLAST of CSPI03G19090 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L764	4.0e-78	100.00	Ferredoxin OS=Cucumis sativus OX=3659 GN=Csa_3G222800 PE=3 SV=1	[more]
A0A5A7TBH5	3.5e-66	83.56	Ferredoxin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold227G00090 PE=...	[more]
A0A1S3C1X0	3.5e-66	83.56	Ferredoxin OS=Cucumis melo OX=3656 GN=LOC103496100 PE=3 SV=1	[more]
A0A6J1J1D5	4.8e-55	71.14	Ferredoxin OS=Cucurbita maxima OX=3661 GN=LOC111481826 PE=3 SV=1	[more]
A0A6J1FPZ2	4.8e-55	71.14	Ferredoxin OS=Cucurbita moschata OX=3662 GN=LOC111447172 PE=3 SV=1	[more]

BLAST of CSPI03G19090 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004146259.1	8.3e-78	100.00	ferredoxin, leaf L-A [Cucumis sativus] >KGN57598.1 hypothetical protein Csa_0110...	[more]
XP_008456052.1	7.3e-66	83.56	PREDICTED: ferredoxin-like [Cucumis melo] >KAA0038971.1 ferredoxin-like [Cucumis...	[more]
XP_038905955.1	2.4e-61	77.18	ferredoxin-like [Benincasa hispida]	[more]
XP_022941964.1	9.8e-55	71.14	ferredoxin-like [Cucurbita moschata] >XP_022983176.1 ferredoxin-like [Cucurbita ...	[more]
XP_022136604.1	5.4e-53	70.95	ferredoxin-like [Momordica charantia]	[more]

BLAST of CSPI03G19090 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G10960.1	8.0e-47	64.38	ferredoxin 1	[more]
AT1G60950.1	4.0e-46	63.45	2Fe-2S ferredoxin-like superfamily protein	[more]
AT2G27510.1	9.5e-32	61.11	ferredoxin 3	[more]
AT5G10000.1	1.0e-25	52.53	ferredoxin 4	[more]
AT4G14890.1	2.4e-14	41.41	2Fe-2S ferredoxin-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012675	Beta-grasp domain superfamily	GENE3D	3.10.20.30		coord: 49..145 e-value: 4.5E-38 score: 131.0
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	PFAM	PF00111	Fer2	coord: 58..130 e-value: 6.4E-20 score: 70.9
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	PROSITE	PS51085	2FE2S_FER_2	coord: 52..142 score: 13.48801
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	CDD	cd00207	fer2	coord: 54..137 e-value: 1.15519E-35 score: 116.726
IPR010241	Ferredoxin [2Fe-2S], plant	TIGRFAM	TIGR02008	TIGR02008	coord: 51..143 e-value: 7.2E-47 score: 155.1
None	No IPR available	PANTHER	PTHR43112:SF17	FERREDOXIN-1, CHLOROPLASTIC	coord: 4..143
None	No IPR available	PANTHER	PTHR43112	FERREDOXIN	coord: 4..143
IPR006058	2Fe-2S ferredoxin, iron-sulphur binding site	PROSITE	PS00197	2FE2S_FER_1	coord: 88..96
IPR036010	2Fe-2S ferredoxin-like superfamily	SUPERFAMILY	54292	2Fe-2S ferredoxin-like	coord: 48..143

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G19090.1	CSPI03G19090.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022900	electron transport chain
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0010008	endosome membrane
cellular_component	GO:0000139	Golgi membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0051537	2 iron, 2 sulfur cluster binding
molecular_function	GO:0009055	electron transfer activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0051536	iron-sulfur cluster binding