CSPI03G17390 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI03G17390
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionNADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
LocationChr3: 13031819 .. 13033795 (+)
RNA-Seq ExpressionCSPI03G17390
SyntenyCSPI03G17390
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTTCTAGTCAATCTCAACAGCGAGAGAATGGCCCCTCCATCCTCCTGAAGCGACTGGCTCGTTACCACTGAGAAGCGTGATCAAGAGGAAGAGACAAGAGTTTTCCGACGATGTTCCTGCGAGCGATCGGACGGCCATTATTGGCCAAAGTGAAGCAAACGACGGGGATCGTCGGTCTGGATGTTGTTCCCAACGCCCGAGAGGTCTTGATCGGCCTTTACAGTAAAACCCTAAAGGAGATCCAGGCCGTCCCCGAGGACGAAGGATACCGTAAGGCGGTTGAGAGCTTTACGCGGCACCGCTTGAAGGTCTGCCAGGAAGAAGAGGATTGGGAGAATATCGAGAAGCGGCTTGGCTGTGGTCAGGTCGAGGAGCTAATCGAGGAGGCCCAGGACGAGCTCAAACTCATTGGTAAAATGATCGGTATGTGTTCAATTCATTGCCACCAAAATTTTAAGTTTACGAATTTGTGAAATTTTGTTGTCTGTAGATTTTCATTTCATTTTCTCGTCCTGTCTGTGTCTGGTTAGGATGGAATGTAAGAATTGGAAAAGGGAGGCATCAGGATTTGTAATCATATTTACATTTTTGCATTCCATTAGAATGACGAAAAAACATCTTCCCACATGCCTTGGAGGATAAAAATTAACGACTTTCAAGGATTGAGAGTCAAGGAATGAAATTTGCATCTTGTTGCACTGAAAAACTTGGGCCACACCCATCAATTAGACCGTGTTTATCCTTCTTCCGTTCTACCCTTTTCTCATCTCGTCGAACCATTTTCCTTATCGCATAGCAGCAATATTTGATTTTCCTTTCGTCTTAACCTAAGATATTAGCTGTCAAAATTGTCTAGGTATCTATTCATTTTACAGGAGTGGTATAAAAGCTTCTTCGATGTATGAATCTCAGGTCCTTCGCTGGTCTTTAGCCACAATTTAGACTATTGGATCACCACTTGACCCATTAATATCTCTGAACTTTTTGAAGTTCGTCTTTTGTTCTCACTAAGGTGGATGAAAGTGCCATTTTGCAAAAGTCAACCTGGACTTATCAACTAGACAAGAAGCTTGAAATTCTTCACTACGACAGAAATTATTTTCATACTGATTCACTGGCAGTATATTTCTTTCTTTCCTCAATCTTAAGGAGGTTTGTTTGTTCAGCTTTTTAGTTTGATTGAGAGTGATTACTAGTTTGCCTAACTTGTCTGGTCTATTGCATTTGGAGAACACTTGAACTATTCCAGATATGGATCTTTGTAGAAATCTGTCAGTTCAACACAATTTGTTGGTGTTGTTTTAGTGATTAGTTTACTTCAACTATGCAGAGTGGGATCCCTGGGGTGTTCCTGAGGACTACGAATGTGAAGTGATCGAGAATGATGCTCCAGTACCGAAGCACATTCCTTTGCACCGACCAGGCCCTCTCCCTGAAGAGTTTTACAAGACGCTGGAGGCCATTAGTGGTGATAGTACTAAAAAAGTAGAGACACCCGAGAAAGCATCTCAGGTGACAGAATGACCTCTTTTTCATCATTTGAAGGATTCAAGTTTCGGATCCCGTTCTTTGTTTTTGGCTTTGATGTTATCTATTTTTGCTTGTTCCCCGATAGAGTGCCTGTATGCAGGGATTGTTCACAAAGTCATGTGTTTCAATAATCTCTATCCAATGTTGGAATTACATAAATTCACTTTTTCATTGCCTTGTTTACTTTTTACCGTGGACATCAAACCCCGTCATGGTTGGACTTTAGAATGAGCAATATTAAATTTAATTTTCCTACCATCTAAATACAAACTCTATAACCTTGTCCTGATTCGGAGGATAAATGATGATCAAATCAATAGCAGAAGAAGAGTTTGAGAATCATAGTTGTTTTGATATGTATTATTTAGGAATTCTAACTAAATAATGGAATTGTAACTAACTTTTCTTGGATATCATTTATTAAATGGTTTTGTCTATCTATCATGA

mRNA sequence

GTTCTAGTCAATCTCAACAGCGAGAGAATGGCCCCTCCATCCTCCTGAAGCGACTGGCTCGTTACCACTGAGAAGCGTGATCAAGAGGAAGAGACAAGAGTTTTCCGACGATGTTCCTGCGAGCGATCGGACGGCCATTATTGGCCAAAGTGAAGCAAACGACGGGGATCGTCGGTCTGGATGTTGTTCCCAACGCCCGAGAGGTCTTGATCGGCCTTTACAGTAAAACCCTAAAGGAGATCCAGGCCGTCCCCGAGGACGAAGGATACCGTAAGGCGGTTGAGAGCTTTACGCGGCACCGCTTGAAGGTCTGCCAGGAAGAAGAGGATTGGGAGAATATCGAGAAGCGGCTTGGCTGTGGTCAGGTCGAGGAGCTAATCGAGGAGGCCCAGGACGAGCTCAAACTCATTGGTAAAATGATCGAGTGGGATCCCTGGGGTGTTCCTGAGGACTACGAATGTGAAGTGATCGAGAATGATGCTCCAGTACCGAAGCACATTCCTTTGCACCGACCAGGCCCTCTCCCTGAAGAGTTTTACAAGACGCTGGAGGCCATTAGTGGTGATAGTACTAAAAAAGTAGAGACACCCGAGAAAGCATCTCAGGTGACAGAATGACCTCTTTTTCATCATTTGAAGGATTCAAGTTTCGGATCCCGTTCTTTGTTTTTGGCTTTGATGTTATCTATTTTTGCTTGTTCCCCGATAGAGTGCCTGTATGCAGGGATTGTTCACAAAGTCATGTGTTTCAATAATCTCTATCCAATGTTGGAATTACATAAATTCACTTTTTCATTGCCTTGTTTACTTTTTACCGTGGACATCAAACCCCGTCATGGTTGGACTTTAGAATGAGCAATATTAAATTTAATTTTCCTACCATCTAAATACAAACTCTATAACCTTGTCCTGATTCGGAGGATAAATGATGATCAAATCAATAGCAGAAGAAGAGTTTGAGAATCATAGTTGTTTTGATATGTATTATTTAGGAATTCTAACTAAATAATGGAATTGTAACTAACTTTTCTTGGATATCATTTATTAAATGGTTTTGTCTATCTATCATGA

Coding sequence (CDS)

ATGTTCCTGCGAGCGATCGGACGGCCATTATTGGCCAAAGTGAAGCAAACGACGGGGATCGTCGGTCTGGATGTTGTTCCCAACGCCCGAGAGGTCTTGATCGGCCTTTACAGTAAAACCCTAAAGGAGATCCAGGCCGTCCCCGAGGACGAAGGATACCGTAAGGCGGTTGAGAGCTTTACGCGGCACCGCTTGAAGGTCTGCCAGGAAGAAGAGGATTGGGAGAATATCGAGAAGCGGCTTGGCTGTGGTCAGGTCGAGGAGCTAATCGAGGAGGCCCAGGACGAGCTCAAACTCATTGGTAAAATGATCGAGTGGGATCCCTGGGGTGTTCCTGAGGACTACGAATGTGAAGTGATCGAGAATGATGCTCCAGTACCGAAGCACATTCCTTTGCACCGACCAGGCCCTCTCCCTGAAGAGTTTTACAAGACGCTGGAGGCCATTAGTGGTGATAGTACTAAAAAAGTAGAGACACCCGAGAAAGCATCTCAGGTGACAGAATGA

Protein sequence

MFLRAIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESFTRHRLKVCQEEEDWENIEKRLGCGQVEELIEEAQDELKLIGKMIEWDPWGVPEDYECEVIENDAPVPKHIPLHRPGPLPEEFYKTLEAISGDSTKKVETPEKASQVTE*
Homology
[Close]
BLAST of CSPI03G17390 vs. ExPASy Swiss-Prot
Match: Q9FLX7 (Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g52840 PE=1 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 1.2e-75
Identity = 138/160 (86.25%), Postives = 146/160 (91.25%), Query Frame = 0 

Query: 1   MFLRAIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESF 60
           MFLRAIGRPLLAKVKQTTGIVGLDVVPNAR VLI LYSKTLKEIQAVPEDEGYRKAVESF
Sbjct: 1   MFLRAIGRPLLAKVKQTTGIVGLDVVPNARAVLIDLYSKTLKEIQAVPEDEGYRKAVESF 60

Query: 61  TRHRLKVCQEEEDWENIEKRLGCGQVEELIEEAQDELKLIGKMIEWDPWGVPEDYECEVI 120
           TR RL VC+EEEDWE IEKRLGCGQVEELIEEA+DEL LIGKMIEWDPWGVP+DYECEVI
Sbjct: 61  TRQRLNVCKEEEDWEMIEKRLGCGQVEELIEEARDELTLIGKMIEWDPWGVPDDYECEVI 120

Query: 121 ENDAPVPKHIPLHRPGPLPEEFYKTLEAISGDSTKKVETP 161
           ENDAP+PKH+P HRPGPLPE+FYKTLE +  +S  K E P
Sbjct: 121 ENDAPIPKHVPQHRPGPLPEQFYKTLEGLIAES--KTEIP 158

[Close]
BLAST of CSPI03G17390 vs. ExPASy Swiss-Prot
Match: Q559Z4 (Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5 OS=Dictyostelium discoideum OX=44689 GN=ndufa5 PE=3 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 2.0e-17
Identity = 44/107 (41.12%), Postives = 71/107 (66.36%), Query Frame = 0 

Query: 14  VKQTTGIVGLDVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESFTRHRLKVCQEEED 73
           +K++TGI GL V PNAR +L GLY++ LK+++ +P   GYRK+ E  T+ RL V + E D
Sbjct: 6   IKKSTGITGLKVEPNARHILAGLYNQLLKKLEILPPTAGYRKSAELETKFRLGVIENETD 65

Query: 74  WENIEKRLGCGQVEELIEEAQDELKLIGKMIEWDPWGVPEDYECEVI 121
              IE ++  GQ+EELI +A+++LK++  + E   W +P+  +  V+
Sbjct: 66  IVKIENKIYAGQIEELIVQAKNDLKVVDLVHESRAWELPDKNKPPVV 112

[Close]
BLAST of CSPI03G17390 vs. ExPASy Swiss-Prot
Match: P23935 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5 OS=Bos taurus OX=9913 GN=NDUFA5 PE=1 SV=3)

HSP 1 Score: 81.6 bits (200), Expect = 9.1e-15
Identity = 41/96 (42.71%), Postives = 61/96 (63.54%), Query Frame = 0 

Query: 14  VKQTTGIVGLDVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESFTRHRLKVCQEEED 73
           +K+TTG+VGL V     E L  LY+K L  +  +P++  YRK  E  T  +L + + E D
Sbjct: 5   LKKTTGLVGLAVCETPHERLKILYTKILDVLGHIPKNAAYRKYTEQITNEKLSMVKAEPD 64

Query: 74  WENIEKRLGCGQVEELIEEAQDELKLIGKMIEWDPW 110
            + +E+RL  GQ+EE+I +A++EL L  KMI+W PW
Sbjct: 65  VKKLEERLQGGQIEEVILQAENELSLARKMIQWKPW 100

[Close]
BLAST of CSPI03G17390 vs. ExPASy Swiss-Prot
Match: Q9CPP6 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5 OS=Mus musculus OX=10090 GN=Ndufa5 PE=1 SV=3)

HSP 1 Score: 76.6 bits (187), Expect = 2.9e-13
Identity = 40/96 (41.67%), Postives = 58/96 (60.42%), Query Frame = 0 

Query: 14  VKQTTGIVGLDVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESFTRHRLKVCQEEED 73
           +K+TTG+VGL V     E L  LY+KTL  ++  P+   YRK  E  T  +L + + E D
Sbjct: 5   LKKTTGLVGLAVCDTPHERLTILYTKTLDILKHFPKHAAYRKYTEQITNEKLDMVKAEPD 64

Query: 74  WENIEKRLGCGQVEELIEEAQDELKLIGKMIEWDPW 110
            + +E  L  G+VEE+I +A+ EL L  KM++W PW
Sbjct: 65  VKKLEALLQGGEVEEVILQAEKELSLARKMLKWKPW 100

[Close]
BLAST of CSPI03G17390 vs. ExPASy Swiss-Prot
Match: Q4R5J1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5 OS=Macaca fascicularis OX=9541 GN=NDUFA5 PE=3 SV=3)

HSP 1 Score: 75.9 bits (185), Expect = 5.0e-13
Identity = 39/96 (40.62%), Postives = 58/96 (60.42%), Query Frame = 0 

Query: 14  VKQTTGIVGLDVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESFTRHRLKVCQEEED 73
           +K+TTG+VGL V     E L  LY+K L  +  +P++  YRK  E  T  +L + + E D
Sbjct: 5   LKKTTGLVGLAVCSTPHERLSILYTKILDVLAEIPKNAAYRKYTEQITNEKLAMVKAEPD 64

Query: 74  WENIEKRLGCGQVEELIEEAQDELKLIGKMIEWDPW 110
            + +E +L  GQ+EE+I +A+ EL L  KM +W PW
Sbjct: 65  VKKLEDQLQGGQLEEVILQAEHELSLARKMRDWKPW 100

[Close]
BLAST of CSPI03G17390 vs. ExPASy TrEMBL
Match: A0A1S3AZ47 (probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103484126 PE=3 SV=1)

HSP 1 Score: 334.3 bits (856), Expect = 2.9e-88
Identity = 163/168 (97.02%), Postives = 166/168 (98.81%), Query Frame = 0 

Query: 1   MFLRAIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESF 60
           MFLRAIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESF
Sbjct: 1   MFLRAIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESF 60

Query: 61  TRHRLKVCQEEEDWENIEKRLGCGQVEELIEEAQDELKLIGKMIEWDPWGVPEDYECEVI 120
           TRHRLKVCQEEEDWENIEKRLGCGQVEELIEEAQDELKLI KMIEWDPWGVP+DYECEVI
Sbjct: 61  TRHRLKVCQEEEDWENIEKRLGCGQVEELIEEAQDELKLIAKMIEWDPWGVPDDYECEVI 120

Query: 121 ENDAPVPKHIPLHRPGPLPEEFYKTLEAISGDSTKKVETPEKASQVTE 169
           ENDAPVPKH+PLHRPGPLPEEFYKTLEAISGDST+KVET EKASQVTE
Sbjct: 121 ENDAPVPKHVPLHRPGPLPEEFYKTLEAISGDSTRKVETTEKASQVTE 168

[Close]
BLAST of CSPI03G17390 vs. ExPASy TrEMBL
Match: A0A5D3DH67 (Putative NADH dehydrogenase (Ubiquinone) 1 alpha subcomplex subunit 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold386G001080 PE=3 SV=1)

HSP 1 Score: 328.9 bits (842), Expect = 1.2e-86
Identity = 160/165 (96.97%), Postives = 163/165 (98.79%), Query Frame = 0 

Query: 1   MFLRAIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESF 60
           MFLRAIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESF
Sbjct: 1   MFLRAIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESF 60

Query: 61  TRHRLKVCQEEEDWENIEKRLGCGQVEELIEEAQDELKLIGKMIEWDPWGVPEDYECEVI 120
           TRHRLKVCQEEEDWENIEKRLGCGQVEELIEEAQDELKLI KMIEWDPWGVP+DYECEVI
Sbjct: 61  TRHRLKVCQEEEDWENIEKRLGCGQVEELIEEAQDELKLIAKMIEWDPWGVPDDYECEVI 120

Query: 121 ENDAPVPKHIPLHRPGPLPEEFYKTLEAISGDSTKKVETPEKASQ 166
           ENDAPVPKH+PLHRPGPLPEEFYKTLEAISGDST+KVET EKASQ
Sbjct: 121 ENDAPVPKHVPLHRPGPLPEEFYKTLEAISGDSTRKVETTEKASQ 165

[Close]
BLAST of CSPI03G17390 vs. ExPASy TrEMBL
Match: A0A6J1E8S3 (probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111430895 PE=3 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 8.7e-85
Identity = 156/168 (92.86%), Postives = 162/168 (96.43%), Query Frame = 0 

Query: 1   MFLRAIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESF 60
           MFLRAIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESF
Sbjct: 1   MFLRAIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESF 60

Query: 61  TRHRLKVCQEEEDWENIEKRLGCGQVEELIEEAQDELKLIGKMIEWDPWGVPEDYECEVI 120
           T HRLKVCQEEEDWENIEKRLGCGQVEELIEEAQDELKLI KMIEWDPWGVP+DYECEVI
Sbjct: 61  TNHRLKVCQEEEDWENIEKRLGCGQVEELIEEAQDELKLIAKMIEWDPWGVPDDYECEVI 120

Query: 121 ENDAPVPKHIPLHRPGPLPEEFYKTLEAISGDSTKKVETPEKASQVTE 169
           ENDAPVPKH+PLHRPGPLPEEFYKTLEAISGD  +KV++ +K SQVTE
Sbjct: 121 ENDAPVPKHVPLHRPGPLPEEFYKTLEAISGDGAQKVDSAKKTSQVTE 168

[Close]
BLAST of CSPI03G17390 vs. ExPASy TrEMBL
Match: A0A6J1JA00 (probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111482620 PE=3 SV=1)

HSP 1 Score: 322.0 bits (824), Expect = 1.5e-84
Identity = 156/168 (92.86%), Postives = 161/168 (95.83%), Query Frame = 0 

Query: 1   MFLRAIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESF 60
           MFLRAIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESF
Sbjct: 1   MFLRAIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESF 60

Query: 61  TRHRLKVCQEEEDWENIEKRLGCGQVEELIEEAQDELKLIGKMIEWDPWGVPEDYECEVI 120
           T HRLKVCQEEEDWE IEKRLGCGQVEELIEEAQDELKLI KMIEWDPWGVP+DYECEVI
Sbjct: 61  TNHRLKVCQEEEDWEKIEKRLGCGQVEELIEEAQDELKLIAKMIEWDPWGVPDDYECEVI 120

Query: 121 ENDAPVPKHIPLHRPGPLPEEFYKTLEAISGDSTKKVETPEKASQVTE 169
           ENDAPVPKH+PLHRPGPLPEEFYKTLEAISGD  +KV++ EK SQVTE
Sbjct: 121 ENDAPVPKHVPLHRPGPLPEEFYKTLEAISGDGAQKVDSAEKTSQVTE 168

[Close]
BLAST of CSPI03G17390 vs. ExPASy TrEMBL
Match: A0A6J1CII6 (probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111011683 PE=3 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 1.2e-83
Identity = 156/168 (92.86%), Postives = 161/168 (95.83%), Query Frame = 0 

Query: 1   MFLRAIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESF 60
           MFLR IGRPLLAKVKQTTGIVGL+VVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESF
Sbjct: 1   MFLRVIGRPLLAKVKQTTGIVGLEVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESF 60

Query: 61  TRHRLKVCQEEEDWENIEKRLGCGQVEELIEEAQDELKLIGKMIEWDPWGVPEDYECEVI 120
           TRHRLKVCQEE+DWE IEKRLGCGQVEELIEEAQDELKLI KMIEWDPWGVP+DYECEVI
Sbjct: 61  TRHRLKVCQEEDDWEKIEKRLGCGQVEELIEEAQDELKLIAKMIEWDPWGVPDDYECEVI 120

Query: 121 ENDAPVPKHIPLHRPGPLPEEFYKTLEAISGDSTKKVETPEKASQVTE 169
           ENDA VPKHIPLHRPGPLPEEFYKTLEAI G S++KVET EKASQVTE
Sbjct: 121 ENDASVPKHIPLHRPGPLPEEFYKTLEAIGGGSSQKVETAEKASQVTE 168

[Close]
BLAST of CSPI03G17390 vs. NCBI nr
Match: XP_004140748.1 (probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial [Cucumis sativus] >KGN57450.2 hypothetical protein Csa_010484 [Cucumis sativus])

HSP 1 Score: 341.3 bits (874), Expect = 4.9e-90
Identity = 167/168 (99.40%), Postives = 168/168 (100.00%), Query Frame = 0 

Query: 1   MFLRAIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESF 60
           MFLRAIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESF
Sbjct: 1   MFLRAIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESF 60

Query: 61  TRHRLKVCQEEEDWENIEKRLGCGQVEELIEEAQDELKLIGKMIEWDPWGVPEDYECEVI 120
           TRHRLKVCQEEEDWENIEKRLGCGQVEELIEEAQDELKLIGKMIEWDPWGVP+DYECEVI
Sbjct: 61  TRHRLKVCQEEEDWENIEKRLGCGQVEELIEEAQDELKLIGKMIEWDPWGVPDDYECEVI 120

Query: 121 ENDAPVPKHIPLHRPGPLPEEFYKTLEAISGDSTKKVETPEKASQVTE 169
           ENDAPVPKHIPLHRPGPLPEEFYKTLEAISGDSTKKVETPEKASQVTE
Sbjct: 121 ENDAPVPKHIPLHRPGPLPEEFYKTLEAISGDSTKKVETPEKASQVTE 168

[Close]
BLAST of CSPI03G17390 vs. NCBI nr
Match: XP_008439300.1 (PREDICTED: probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial [Cucumis melo])

HSP 1 Score: 334.3 bits (856), Expect = 5.9e-88
Identity = 163/168 (97.02%), Postives = 166/168 (98.81%), Query Frame = 0 

Query: 1   MFLRAIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESF 60
           MFLRAIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESF
Sbjct: 1   MFLRAIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESF 60

Query: 61  TRHRLKVCQEEEDWENIEKRLGCGQVEELIEEAQDELKLIGKMIEWDPWGVPEDYECEVI 120
           TRHRLKVCQEEEDWENIEKRLGCGQVEELIEEAQDELKLI KMIEWDPWGVP+DYECEVI
Sbjct: 61  TRHRLKVCQEEEDWENIEKRLGCGQVEELIEEAQDELKLIAKMIEWDPWGVPDDYECEVI 120

Query: 121 ENDAPVPKHIPLHRPGPLPEEFYKTLEAISGDSTKKVETPEKASQVTE 169
           ENDAPVPKH+PLHRPGPLPEEFYKTLEAISGDST+KVET EKASQVTE
Sbjct: 121 ENDAPVPKHVPLHRPGPLPEEFYKTLEAISGDSTRKVETTEKASQVTE 168

[Close]
BLAST of CSPI03G17390 vs. NCBI nr
Match: KAA0033708.1 (putative NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 5 [Cucumis melo var. makuwa] >TYK23001.1 putative NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 5 [Cucumis melo var. makuwa])

HSP 1 Score: 328.9 bits (842), Expect = 2.5e-86
Identity = 160/165 (96.97%), Postives = 163/165 (98.79%), Query Frame = 0 

Query: 1   MFLRAIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESF 60
           MFLRAIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESF
Sbjct: 1   MFLRAIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESF 60

Query: 61  TRHRLKVCQEEEDWENIEKRLGCGQVEELIEEAQDELKLIGKMIEWDPWGVPEDYECEVI 120
           TRHRLKVCQEEEDWENIEKRLGCGQVEELIEEAQDELKLI KMIEWDPWGVP+DYECEVI
Sbjct: 61  TRHRLKVCQEEEDWENIEKRLGCGQVEELIEEAQDELKLIAKMIEWDPWGVPDDYECEVI 120

Query: 121 ENDAPVPKHIPLHRPGPLPEEFYKTLEAISGDSTKKVETPEKASQ 166
           ENDAPVPKH+PLHRPGPLPEEFYKTLEAISGDST+KVET EKASQ
Sbjct: 121 ENDAPVPKHVPLHRPGPLPEEFYKTLEAISGDSTRKVETTEKASQ 165

[Close]
BLAST of CSPI03G17390 vs. NCBI nr
Match: XP_023553539.1 (probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 323.2 bits (827), Expect = 1.4e-84
Identity = 157/168 (93.45%), Postives = 161/168 (95.83%), Query Frame = 0 

Query: 1   MFLRAIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESF 60
           MFLRAIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESF
Sbjct: 1   MFLRAIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESF 60

Query: 61  TRHRLKVCQEEEDWENIEKRLGCGQVEELIEEAQDELKLIGKMIEWDPWGVPEDYECEVI 120
           T HRLKVCQEEEDWE IEKRLGCGQVEELIEEAQDELKLI KMIEWDPWGVP+DYECEVI
Sbjct: 61  TNHRLKVCQEEEDWEKIEKRLGCGQVEELIEEAQDELKLIAKMIEWDPWGVPDDYECEVI 120

Query: 121 ENDAPVPKHIPLHRPGPLPEEFYKTLEAISGDSTKKVETPEKASQVTE 169
           ENDAPVPKH+PLHRPGPLPEEFYKTLEAISGD  +KVE+ EK SQVTE
Sbjct: 121 ENDAPVPKHVPLHRPGPLPEEFYKTLEAISGDGAQKVESAEKTSQVTE 168

[Close]
BLAST of CSPI03G17390 vs. NCBI nr
Match: XP_022923143.1 (probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial [Cucurbita moschata])

HSP 1 Score: 322.8 bits (826), Expect = 1.8e-84
Identity = 156/168 (92.86%), Postives = 162/168 (96.43%), Query Frame = 0 

Query: 1   MFLRAIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESF 60
           MFLRAIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESF
Sbjct: 1   MFLRAIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESF 60

Query: 61  TRHRLKVCQEEEDWENIEKRLGCGQVEELIEEAQDELKLIGKMIEWDPWGVPEDYECEVI 120
           T HRLKVCQEEEDWENIEKRLGCGQVEELIEEAQDELKLI KMIEWDPWGVP+DYECEVI
Sbjct: 61  TNHRLKVCQEEEDWENIEKRLGCGQVEELIEEAQDELKLIAKMIEWDPWGVPDDYECEVI 120

Query: 121 ENDAPVPKHIPLHRPGPLPEEFYKTLEAISGDSTKKVETPEKASQVTE 169
           ENDAPVPKH+PLHRPGPLPEEFYKTLEAISGD  +KV++ +K SQVTE
Sbjct: 121 ENDAPVPKHVPLHRPGPLPEEFYKTLEAISGDGAQKVDSAKKTSQVTE 168

[Close]
BLAST of CSPI03G17390 vs. TAIR 10
Match: AT5G52840.1 (NADH-ubiquinone oxidoreductase-related )

HSP 1 Score: 283.9 bits (725), Expect = 8.6e-77
Identity = 138/160 (86.25%), Postives = 146/160 (91.25%), Query Frame = 0 

Query: 1   MFLRAIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESF 60
           MFLRAIGRPLLAKVKQTTGIVGLDVVPNAR VLI LYSKTLKEIQAVPEDEGYRKAVESF
Sbjct: 1   MFLRAIGRPLLAKVKQTTGIVGLDVVPNARAVLIDLYSKTLKEIQAVPEDEGYRKAVESF 60

Query: 61  TRHRLKVCQEEEDWENIEKRLGCGQVEELIEEAQDELKLIGKMIEWDPWGVPEDYECEVI 120
           TR RL VC+EEEDWE IEKRLGCGQVEELIEEA+DEL LIGKMIEWDPWGVP+DYECEVI
Sbjct: 61  TRQRLNVCKEEEDWEMIEKRLGCGQVEELIEEARDELTLIGKMIEWDPWGVPDDYECEVI 120

Query: 121 ENDAPVPKHIPLHRPGPLPEEFYKTLEAISGDSTKKVETP 161
           ENDAP+PKH+P HRPGPLPE+FYKTLE +  +S  K E P
Sbjct: 121 ENDAPIPKHVPQHRPGPLPEQFYKTLEGLIAES--KTEIP 158

[Close]
BLAST of CSPI03G17390 vs. TAIR 10
Match: AT4G28005.1 (BEST Arabidopsis thaliana protein match is: NADH-ubiquinone oxidoreductase-related (TAIR:AT5G52840.1); Has 37 Blast hits to 37 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 115.9 bits (289), Expect = 3.1e-26
Identity = 71/157 (45.22%), Postives = 84/157 (53.50%), Query Frame = 0 

Query: 1   MFLRAIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESF 60
           MF R IGRPLLAKVKQTTGIV                                       
Sbjct: 1   MFQRVIGRPLLAKVKQTTGIV--------------------------------------- 60

Query: 61  TRHRLKVCQEEEDWENIEKRLGCGQVEELIEEAQDELKLIGKMIEWDPWGVPEDYECEVI 120
                +VC EEEDW  IEKRL CG+VEELIEEA DEL L+GKMI              +I
Sbjct: 61  -----EVCPEEEDWGVIEKRLACGKVEELIEEASDELTLVGKMI--------GSLHPNLI 103

Query: 121 ENDAPVPKHIPLHRPGPLPEEFYKTLEAISGDSTKKV 158
              AP+PKH+P HRPGPLPEEFY+TL+A++ +S  ++
Sbjct: 121 L--APIPKHVPHHRPGPLPEEFYRTLQAVNSESKTEI 103

The following BLAST results are available for this feature:
BLAST of CSPI03G17390 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9FLX71.2e-7586.25Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochond... [more]
Q559Z42.0e-1741.12Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5 OS=Dictyos... [more]
P239359.1e-1542.71NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5 OS=Bos taurus OX=99... [more]
Q9CPP62.9e-1341.67NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5 OS=Mus musculus OX=... [more]
Q4R5J15.0e-1340.63NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5 OS=Macaca fascicula... [more]
BLAST of CSPI03G17390 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3AZ472.9e-8897.02probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochond... [more]
A0A5D3DH671.2e-8696.97Putative NADH dehydrogenase (Ubiquinone) 1 alpha subcomplex subunit 5 OS=Cucumis... [more]
A0A6J1E8S38.7e-8592.86probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochond... [more]
A0A6J1JA001.5e-8492.86probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochond... [more]
A0A6J1CII61.2e-8392.86probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochond... [more]
BLAST of CSPI03G17390 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004140748.14.9e-9099.40probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochond... [more]
XP_008439300.15.9e-8897.02PREDICTED: probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5... [more]
KAA0033708.12.5e-8696.97putative NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 5 [Cucumis m... [more]
XP_023553539.11.4e-8493.45probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochond... [more]
XP_022923143.11.8e-8492.86probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochond... [more]
BLAST of CSPI03G17390 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G52840.18.6e-7786.25NADH-ubiquinone oxidoreductase-related [more]
AT4G28005.13.1e-2645.22BEST Arabidopsis thaliana protein match is: NADH-ubiquinone oxidoreductase-relat... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006806NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5PFAMPF04716ETC_C1_NDUFA5coord: 22..88
e-value: 1.9E-27
score: 94.9
IPR006806NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5PANTHERPTHR12653NADH-UBIQUINONE OXIDOREDUCTASE 13 KD-B SUBUNITcoord: 1..161
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 149..168
NoneNo IPR availablePANTHERPTHR12653:SF1BNAA02G10640D PROTEINcoord: 1..161

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI03G17390.1CSPI03G17390.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0022904 respiratory electron transport chain
cellular_component GO:0005743 mitochondrial inner membrane
cellular_component GO:0045271 respiratory chain complex I