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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGGATGAAGACAAATTTAATACAATATCTAACCAAACGGATGTTAACCAACCAAACCCAGTTTCGGATGTTAACCAACCAAACCCAAAAGTTAATGGGCATTCAAGGTATTCAACTAAAATTGTAGAAAAGCACGAAAATCTTACCCAAACTAAATTTTCGGTGAGATACGGCGGTAACCGACAGGTGAACGGGAAATTCCGACGGCAGCGACGAGCAACTCCGGCACGAAAGAAGGAAGGTAGCGACTTGCTGGTTGTGGCCGGCAGCTGGCGTAACTGA mRNA sequence ATGGATGAAGACAAATTTAATACAATATCTAACCAAACGGATGTTAACCAACCAAACCCAGTTTCGGATGTTAACCAACCAAACCCAAAAGTTAATGGGCATTCAAGGTATTCAACTAAAATTGTAGAAAAGCACGAAAATCTTACCCAAACTAAATTTTCGGTGAGATACGGCGGTAACCGACAGGTGAACGGGAAATTCCGACGGCAGCGACGAGCAACTCCGGCACGAAAGAAGGAAGGTAGCGACTTGCTGGTTGTGGCCGGCAGCTGGCGTAACTGA Coding sequence (CDS) ATGGATGAAGACAAATTTAATACAATATCTAACCAAACGGATGTTAACCAACCAAACCCAGTTTCGGATGTTAACCAACCAAACCCAAAAGTTAATGGGCATTCAAGGTATTCAACTAAAATTGTAGAAAAGCACGAAAATCTTACCCAAACTAAATTTTCGGTGAGATACGGCGGTAACCGACAGGTGAACGGGAAATTCCGACGGCAGCGACGAGCAACTCCGGCACGAAAGAAGGAAGGTAGCGACTTGCTGGTTGTGGCCGGCAGCTGGCGTAACTGA Protein sequence MDEDKFNTISNQTDVNQPNPVSDVNQPNPKVNGHSRYSTKIVEKHENLTQTKFSVRYGGNRQVNGKFRRQRRATPARKKEGSDLLVVAGSWRN*
Homology
BLAST of CSPI03G17000 vs. NCBI nr
Match: KAE8650458.1 (hypothetical protein Csa_023699, partial [Cucumis sativus]) HSP 1 Score: 167.2 bits (422), Expect = 7.0e-38 Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0
Query: 12 QTDVNQPNPVSDVNQPNPKVNGHSRYSTKIVEKHENLTQTKFSVRYGGNRQVNGKFRRQR 71
QTDVNQPNPVSDVNQPNPKVNGHSRYSTKIVEKHENLTQTKFSVRYGGNRQVNGKFRRQR
Sbjct: 8 QTDVNQPNPVSDVNQPNPKVNGHSRYSTKIVEKHENLTQTKFSVRYGGNRQVNGKFRRQR 67
Query: 72 RATPARKKEGSDLLVVAGSWRN 94
RATPARKKEGSDLLVVAGSWRN
Sbjct: 68 RATPARKKEGSDLLVVAGSWRN 89
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
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| KAE8650458.1 | 7.0e-38 | 100.00 | hypothetical protein Csa_023699, partial [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
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InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
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| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 8..34 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..34 |
Relationships
The following mRNA feature(s) are a part of this gene:
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