CSPI03G16380 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI03G16380
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	BHLH domain-containing protein
Location	Chr3: 12260284 .. 12261142 (+)
RNA-Seq Expression	CSPI03G16380
Synteny	CSPI03G16380

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTCCTTTCAATGATTCCTCTCATGATATTGATGATTACCAAATCCATCTCCAAAATCTCTTTTCTTATCAACTAATTTCATCGCAAGAAGGATGCAGTCGTACTGAAAATCTTAATACCAACAGCAAAATTGACGAAACCACTCAAAATGAAGAAAAGAAGATTATGCACCGAGATCTTGAACGTGAAAGAAGAAAACAAATGACCTCTCTTCTCACCAACCTTCGATCTTTGCTTCCTCTTGAATTTATAAAGGTAAAAAAGAAAAAAGAAAAAAAAACCCATCTTTTTGCTTTAATTACCTTGTATTTTTGTTGATTATTTATGTAATTATTTATTGATTATTTTAGGGTAGGCGTAGTAGGGTTGATATTGTTGATGAAGCTGTGAATTATATTGAATATTTAAGAGGGAGGATGAATGAGCTTCATGTTAAAAGAGACGCGATAGTAAAGAGGCTGCATTTGGAATCATCCTCAAGTTGCAATAATGATATTCCTTCTACAAGTTGTGTTGTAATTAAGCAATATTCAGGTGGATTGGAGATTGTGATAAGTAACGGCATTATTTCAGAGCAGAATTTTCAACTTTCAGGAGTGATGAGGGTTTTGATTGAACAAAGTATTGAGATTGAAACTTGTTCTTCTACCAAATTAAATGAAAGGATGTTGCACACTATTCAGACAAAGGTTGTTTGATTATTTATTATTGCAGGATTTGAATCTTTTTTTTATATAGTATGATTTTTTGTTATCTTATGTTGTTGATTCTTTTTGTTTTTCAGGTAGATGATCCAACCAAGATTGATCTGCATGAACTGAAGCAAAAACTATATCAAGTTTGCAATTCTGAGTGA

mRNA sequence

ATGTTTCCTTTCAATGATTCCTCTCATGATATTGATGATTACCAAATCCATCTCCAAAATCTCTTTTCTTATCAACTAATTTCATCGCAAGAAGGATGCAGTCGTACTGAAAATCTTAATACCAACAGCAAAATTGACGAAACCACTCAAAATGAAGAAAAGAAGATTATGCACCGAGATCTTGAACGTGAAAGAAGAAAACAAATGACCTCTCTTCTCACCAACCTTCGATCTTTGCTTCCTCTTGAATTTATAAAGGGTAGGCGTAGTAGGGTTGATATTGTTGATGAAGCTGTGAATTATATTGAATATTTAAGAGGGAGGATGAATGAGCTTCATGTTAAAAGAGACGCGATAGTAAAGAGGCTGCATTTGGAATCATCCTCAAGTTGCAATAATGATATTCCTTCTACAAGTTGTGTTGTAATTAAGCAATATTCAGGTGGATTGGAGATTGTGATAAGTAACGGCATTATTTCAGAGCAGAATTTTCAACTTTCAGGAGTGATGAGGGTTTTGATTGAACAAAGTATTGAGATTGAAACTTGTTCTTCTACCAAATTAAATGAAAGGATGTTGCACACTATTCAGACAAAGGTAGATGATCCAACCAAGATTGATCTGCATGAACTGAAGCAAAAACTATATCAAGTTTGCAATTCTGAGTGA

Coding sequence (CDS)

ATGTTTCCTTTCAATGATTCCTCTCATGATATTGATGATTACCAAATCCATCTCCAAAATCTCTTTTCTTATCAACTAATTTCATCGCAAGAAGGATGCAGTCGTACTGAAAATCTTAATACCAACAGCAAAATTGACGAAACCACTCAAAATGAAGAAAAGAAGATTATGCACCGAGATCTTGAACGTGAAAGAAGAAAACAAATGACCTCTCTTCTCACCAACCTTCGATCTTTGCTTCCTCTTGAATTTATAAAGGGTAGGCGTAGTAGGGTTGATATTGTTGATGAAGCTGTGAATTATATTGAATATTTAAGAGGGAGGATGAATGAGCTTCATGTTAAAAGAGACGCGATAGTAAAGAGGCTGCATTTGGAATCATCCTCAAGTTGCAATAATGATATTCCTTCTACAAGTTGTGTTGTAATTAAGCAATATTCAGGTGGATTGGAGATTGTGATAAGTAACGGCATTATTTCAGAGCAGAATTTTCAACTTTCAGGAGTGATGAGGGTTTTGATTGAACAAAGTATTGAGATTGAAACTTGTTCTTCTACCAAATTAAATGAAAGGATGTTGCACACTATTCAGACAAAGGTAGATGATCCAACCAAGATTGATCTGCATGAACTGAAGCAAAAACTATATCAAGTTTGCAATTCTGAGTGA

Protein sequence

MFPFNDSSHDIDDYQIHLQNLFSYQLISSQEGCSRTENLNTNSKIDETTQNEEKKIMHRDLERERRKQMTSLLTNLRSLLPLEFIKGRRSRVDIVDEAVNYIEYLRGRMNELHVKRDAIVKRLHLESSSSCNNDIPSTSCVVIKQYSGGLEIVISNGIISEQNFQLSGVMRVLIEQSIEIETCSSTKLNERMLHTIQTKVDDPTKIDLHELKQKLYQVCNSE*

Homology

[Close]

BLAST of CSPI03G16380 vs. ExPASy Swiss-Prot
Match: Q9FLI1 (Transcription factor bHLH36 OS=Arabidopsis thaliana OX=3702 GN=BHLH36 PE=2 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 7.8e-22
Identity = 69/173 (39.88%), Postives = 111/173 (64.16%), Query Frame = 0


Query: 54  KKIMHRDLERERRKQMTSLLTNLRSLLPLEFIKGRRSRVDIVDEAVNYIEYLRGRMNELH 113
           +K+MHR+ ER+RR++M SL  +LRSLLPL FIKG+RS  D V+EAVNYI+YL+ ++ EL 
Sbjct: 2   EKMMHRETERQRRQEMASLYASLRSLLPLHFIKGKRSTSDQVNEAVNYIKYLQRKIKELS 61

Query: 114 VKRDAIVKRLHLESSSSCNND-------IPSTSCVVIKQYSGGLEIVISNGIISEQNFQL 173
           V+RD ++         S N D       I   + VV++Q   G+EI++S+     Q  + 
Sbjct: 62  VRRDDLMVLSRGSLLGSSNGDFKEDVEMISGKNHVVVRQCLVGVEIMLSSRCCGGQP-RF 121

Query: 174 SGVMRVLIEQSIEIETCSSTKLNERMLHTIQTKVDD-PTKIDLHELKQKLYQV 219
           S V++VL E  + +    S+ +++R+++TIQ +V+D    IDL EL+++L ++
Sbjct: 122 SSVLQVLSEYGLCLLNSISSIVDDRLVYTIQAEVNDMALMIDLAELEKRLIRM 173

[Close]

BLAST of CSPI03G16380 vs. ExPASy Swiss-Prot
Match: Q9STJ6 (Transcription factor bHLH126 OS=Arabidopsis thaliana OX=3702 GN=BHLH126 PE=2 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 6.6e-21
Identity = 63/181 (34.81%), Postives = 111/181 (61.33%), Query Frame = 0


Query: 47  ETTQN-EEKKIMHRDLERERRKQMTSLLTNLRSLLPLEFIKGRRSRVDIVDEAVNYIEYL 106
           ET  N ++KK++HRD+ER+RR++M +L   LR+ LPL++IKG+R+  D V+ AVN+I+  
Sbjct: 35  ETDDNKKKKKLLHRDIERQRRQEMATLFATLRTHLPLKYIKGKRAVSDHVNGAVNFIKDT 94

Query: 107 RGRMNELHVKRDAIVKRLHL---------ESSSSCNNDIPSTSCVVIKQYSGGLEIVISN 166
             R+ EL  +RD + +             ++ S      P+T  V+++ +  GLE+V+S+
Sbjct: 95  EARIKELSARRDELSRETGQGYKSNPDPGKTGSDVGKSEPAT--VMVQPHVSGLEVVVSS 154

Query: 167 GIISEQNFQLSGVMRVLIEQSIEIETCSSTKLNERMLHTIQTKVDDPTKIDLHELKQKLY 218
                +   LS V+  + E+ +E+ +  +T++N+R++HTIQ +V+    IDL  L+QKL 
Sbjct: 155 NSSGPEALPLSKVLETIQEKGLEVMSSFTTRVNDRLMHTIQVEVNSFGCIDLLWLQQKLV 213

[Close]

BLAST of CSPI03G16380 vs. ExPASy Swiss-Prot
Match: Q9STJ7 (Transcription factor bHLH118 OS=Arabidopsis thaliana OX=3702 GN=BHLH118 PE=2 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 9.5e-20
Identity = 66/165 (40.00%), Postives = 106/165 (64.24%), Query Frame = 0


Query: 54  KKIMHRDLERERRKQMTSLLTNLRSLLPLEFIKGRRSRVDIVDEAVNYIEYLRGRMNELH 113
           +K++H+++E+ RR++M SL  +LRSLLPLEFI+G+RS  D V  AVNYI+YL+  + +++
Sbjct: 2   EKLVHKEIEKRRRQEMASLYASLRSLLPLEFIQGKRSTSDQVKGAVNYIDYLQRNIKDIN 61

Query: 114 VKRDAIV---KRLHLESSSSCNNDIPSTSCVVIKQYSGGLEIVISNGIISEQNFQLSGVM 173
            KRD +V    R    S+    N+I  ++ VVI+    G+EIV+S   I +  F  S V+
Sbjct: 62  SKRDDLVLLSGRSFRSSNEQEWNEI--SNHVVIRPCLVGIEIVLS---ILQTPF--SSVL 121

Query: 174 RVLIEQSIEIETCSSTKLNERMLHTIQTKVDDPTKIDLHELKQKL 216
           +VL E  + +     + +N+R++HT+Q +V+D   IDL +LK  L
Sbjct: 122 QVLREHGLYVLGYICSSVNDRLIHTLQAEVNDLALIDLADLKDTL 159

[Close]

BLAST of CSPI03G16380 vs. ExPASy Swiss-Prot
Match: Q9LN95 (Transcription factor bHLH55 OS=Arabidopsis thaliana OX=3702 GN=BHLH55 PE=2 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.6e-19
Identity = 72/204 (35.29%), Postives = 119/204 (58.33%), Query Frame = 0


Query: 30  QEGCSRTENLNTNSKIDETTQNEEKKIMHRDLERERRKQMTSLLTNLRSLLPLEFIKGRR 89
           ++ C  T  L+   K D+  +N  K+  H++LER+RR++ TSL   LR LLP ++IKG+R
Sbjct: 53  RQNCETTMTLSEIMKGDDEPKN--KRAKHKELERQRRQENTSLFKILRYLLPSQYIKGKR 112

Query: 90  SRVDIVDEAVNYIEYLRGRMNELHVKRDAIVKRL-HLES----------SSSCNNDIPST 149
           S  D V EAVNYI+ L+ ++ E+  KRD I + + H  S          SS+C+    + 
Sbjct: 113 SSADHVLEAVNYIKDLQKKIKEVSEKRDRIKRSITHPSSRGEFSIRSLASSTCSCVGDTN 172

Query: 150 SCVVIKQYSGGLEIVISNGIISEQNFQLSGVMRVLI-EQSIEIETCSSTKLNERMLHTIQ 209
             VV++    GLEIV+S    +     LS V+++L  EQ   I +C ST+L++  +HTI 
Sbjct: 173 IAVVVRPCLIGLEIVVS--CCNRHESCLSSVLQLLAQEQCFNIVSCISTRLHQGFIHTIA 232

Query: 210 TKVDDPTKIDLHELKQKLYQVCNS 222
           ++V++  ++   EL++K+ ++  S
Sbjct: 233 SEVEEGIEVYFSELQEKIIKIGTS 252

[Close]

BLAST of CSPI03G16380 vs. ExPASy Swiss-Prot
Match: Q9FLI0 (Transcription factor bHLH120 OS=Arabidopsis thaliana OX=3702 GN=BHLH120 PE=2 SV=2)

HSP 1 Score: 95.1 bits (235), Expect = 1.0e-18
Identity = 60/177 (33.90%), Postives = 108/177 (61.02%), Query Frame = 0


Query: 46  DETTQNEEKKIMHRDLERERRKQMTSLLTNLRSLLPLEFIKGRRSRVDIVDEAVNYIEYL 105
           DET   +EKK++HR++ER+RR++M  L  +LRS LPL++IKG+R+  D V+ AV++I+  
Sbjct: 21  DET--KKEKKLLHRNIERQRRQEMAILFASLRSQLPLKYIKGKRAMSDHVNGAVSFIKDT 80

Query: 106 RGRMNELHVKRDAIVKRLH-----LESSSSCNNDIPSTSCVVIKQYSGGLEIVISNGIIS 165
           + R+ +L  +RD + + +        S S   +     + V+++    G E+V+S+    
Sbjct: 81  QTRIKDLSARRDELKREIGDPTSLTGSGSGSGSSRSEPASVMVQPCVSGFEVVVSSLASG 140

Query: 166 EQNFQLSGVMRVLIEQSIEIETCSSTKLNERMLHTIQTKVDDPTKIDLHELKQKLYQ 218
            + + LS V+ VL  Q +E+ +  + ++NER+++TIQ +V+     DL  L+QKL +
Sbjct: 141 LEAWPLSRVLEVLHGQGLEVISSLTARVNERLMYTIQVEVNSFDCFDLAWLQQKLIE 195

[Close]

BLAST of CSPI03G16380 vs. ExPASy TrEMBL
Match: A0A0A0L9L0 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G178580 PE=4 SV=1)

HSP 1 Score: 428.7 bits (1101), Expect = 1.5e-116
Identity = 222/222 (100.00%), Postives = 222/222 (100.00%), Query Frame = 0


Query: 1   MFPFNDSSHDIDDYQIHLQNLFSYQLISSQEGCSRTENLNTNSKIDETTQNEEKKIMHRD 60
           MFPFNDSSHDIDDYQIHLQNLFSYQLISSQEGCSRTENLNTNSKIDETTQNEEKKIMHRD
Sbjct: 1   MFPFNDSSHDIDDYQIHLQNLFSYQLISSQEGCSRTENLNTNSKIDETTQNEEKKIMHRD 60

Query: 61  LERERRKQMTSLLTNLRSLLPLEFIKGRRSRVDIVDEAVNYIEYLRGRMNELHVKRDAIV 120
           LERERRKQMTSLLTNLRSLLPLEFIKGRRSRVDIVDEAVNYIEYLRGRMNELHVKRDAIV
Sbjct: 61  LERERRKQMTSLLTNLRSLLPLEFIKGRRSRVDIVDEAVNYIEYLRGRMNELHVKRDAIV 120

Query: 121 KRLHLESSSSCNNDIPSTSCVVIKQYSGGLEIVISNGIISEQNFQLSGVMRVLIEQSIEI 180
           KRLHLESSSSCNNDIPSTSCVVIKQYSGGLEIVISNGIISEQNFQLSGVMRVLIEQSIEI
Sbjct: 121 KRLHLESSSSCNNDIPSTSCVVIKQYSGGLEIVISNGIISEQNFQLSGVMRVLIEQSIEI 180

Query: 181 ETCSSTKLNERMLHTIQTKVDDPTKIDLHELKQKLYQVCNSE 223
           ETCSSTKLNERMLHTIQTKVDDPTKIDLHELKQKLYQVCNSE
Sbjct: 181 ETCSSTKLNERMLHTIQTKVDDPTKIDLHELKQKLYQVCNSE 222

[Close]

BLAST of CSPI03G16380 vs. ExPASy TrEMBL
Match: A0A1S3AY11 (transcription factor bHLH36-like OS=Cucumis melo OX=3656 GN=LOC103484025 PE=4 SV=1)

HSP 1 Score: 399.4 bits (1025), Expect = 9.6e-108
Identity = 209/222 (94.14%), Postives = 218/222 (98.20%), Query Frame = 0


Query: 1   MFPFNDSSHDIDDYQIHLQNLFSYQLISSQEGCSRTENLNTNSKIDETTQNEEKKIMHRD 60
           MFPFNDSSHDID+YQIHLQNLFSYQLISSQEG S +ENLNTN+KIDETTQNEEKKIMHRD
Sbjct: 1   MFPFNDSSHDIDNYQIHLQNLFSYQLISSQEGGS-SENLNTNNKIDETTQNEEKKIMHRD 60

Query: 61  LERERRKQMTSLLTNLRSLLPLEFIKGRRSRVDIVDEAVNYIEYLRGRMNELHVKRDAIV 120
           +ERERRKQM SLLTNLRSLLPLEFIKGRRSRVDIVDEAVNYIEYLRG++NELH+KRDAIV
Sbjct: 61  VERERRKQMASLLTNLRSLLPLEFIKGRRSRVDIVDEAVNYIEYLRGKINELHLKRDAIV 120

Query: 121 KRLHLESSSSCNNDIPSTSCVVIKQYSGGLEIVISNGIISEQNFQLSGVMRVLIEQSIEI 180
           KRLHLESSSSCNNDIPSTSCVVIKQYSGGLEIVISNGIISEQNFQLSGVMRVLIEQSIEI
Sbjct: 121 KRLHLESSSSCNNDIPSTSCVVIKQYSGGLEIVISNGIISEQNFQLSGVMRVLIEQSIEI 180

Query: 181 ETCSSTKLNERMLHTIQTKVDDPTKIDLHELKQKLYQVCNSE 223
           ETCSSTKLNERML+TIQTKVDD TKIDLHELKQ+LYQVCNSE
Sbjct: 181 ETCSSTKLNERMLYTIQTKVDDSTKIDLHELKQRLYQVCNSE 221

[Close]

BLAST of CSPI03G16380 vs. ExPASy TrEMBL
Match: A0A6J1EAE1 (transcription factor bHLH118-like OS=Cucurbita moschata OX=3662 GN=LOC111430817 PE=4 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 4.8e-59
Identity = 138/219 (63.01%), Postives = 165/219 (75.34%), Query Frame = 0


Query: 1   MFPFNDSSHDIDDYQIHLQNLFSYQLISSQEGCSRTENLNTNSKIDETTQNEEKKIMHRD 60
           MFPFN  SH    +Q+               GC  +  LN N KI E+T NE +KI+HRD
Sbjct: 1   MFPFNHPSHHHQPHQL--------------SGCEGSSELNPN-KI-ESTHNEVRKIVHRD 60

Query: 61  LERERRKQMTSLLTNLRSLLPLEFIKGRRSRVDIVDEAVNYIEYLRGRMNELHVKRDAIV 120
           LERERRKQM SLLTNLRSLLPL+ ++GRR+R DIVDEAVNYIE+ RG+++ELHVKRDAI 
Sbjct: 61  LERERRKQMLSLLTNLRSLLPLQLVEGRRTRADIVDEAVNYIEHFRGKISELHVKRDAI- 120

Query: 121 KRLHLESSSSCNNDIPSTSCVVIKQYSGGLEIVISNGIISEQNFQLSGVMRVLIEQSIEI 180
           K LHL+ SS    D+  +SCVVIK YSGGLEIVIS  I  EQN +LS VMRVL+E+SIEI
Sbjct: 121 KGLHLDESS----DLCPSSCVVIKPYSGGLEIVIS--IFREQNLELSEVMRVLLEESIEI 180

Query: 181 ETCSSTKLNERMLHTIQTKVDDPTKIDLHELKQKLYQVC 220
            +C+STK+ E MLHTI TKVDDPT+ID+HEL+QKLY+VC
Sbjct: 181 TSCASTKVKEMMLHTIHTKVDDPTRIDVHELQQKLYRVC 196

[Close]

BLAST of CSPI03G16380 vs. ExPASy TrEMBL
Match: A0A6J1JAJ0 (transcription factor bHLH118-like OS=Cucurbita maxima OX=3661 GN=LOC111482745 PE=4 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 1.2e-57
Identity = 136/221 (61.54%), Postives = 165/221 (74.66%), Query Frame = 0


Query: 1   MFPFNDSSHDIDDYQIHLQNLFSYQLISSQEGCSRTENLNTNSKIDETTQNEEKKIMHRD 60
           MFPFND SH    +Q+               GC  +  LN N KI E+T NE ++I+HRD
Sbjct: 1   MFPFNDPSHHHQPHQL--------------SGCEGSSELNAN-KI-ESTHNEVRQIVHRD 60

Query: 61  LERERRKQMTSLLTNLRSLLPLEFIKGRRSRVDIVDEAVNYIEYLRGRMNELHVKRDAIV 120
           LERERRKQM SL T+LRSLLPL  ++GRR+R DIVDEAVNYIE+LRG+++EL VKRDAI 
Sbjct: 61  LERERRKQMGSLFTDLRSLLPLPLVEGRRTRADIVDEAVNYIEHLRGKISELQVKRDAI- 120

Query: 121 KRLHLESSSSCNNDIPSTSCVVIKQYSGGLEIVISNGIISEQNFQLSGVMRVLIEQSIEI 180
           K LHL+ SS    D+  +SCVVIK YSGGLEI+IS  I  EQN +LS VMRVL+E+SIEI
Sbjct: 121 KGLHLDESS----DLCPSSCVVIKPYSGGLEIMIS--IFREQNLELSEVMRVLVEESIEI 180

Query: 181 ETCSSTKLNERMLHTIQTKVDDPTKIDLHELKQKLYQVCNS 222
            +C+STK+ ERMLHTI TKVDDP +ID+HEL+QKL+QVC S
Sbjct: 181 MSCASTKVKERMLHTIHTKVDDPKRIDVHELQQKLHQVCTS 198

[Close]

BLAST of CSPI03G16380 vs. ExPASy TrEMBL
Match: A0A6J1CHG5 (transcription factor bHLH36-like OS=Momordica charantia OX=3673 GN=LOC111011678 PE=4 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 2.8e-51
Identity = 125/224 (55.80%), Postives = 162/224 (72.32%), Query Frame = 0


Query: 1   MFPFNDSSHDIDDYQIHLQNLFSYQLISSQEGCS----RTENLNTNSKIDETTQNEEKKI 60
           MFPFN                  +   S+ EG S      +NL +NS+    T ++++KI
Sbjct: 1   MFPFN-----------------QFYEFSAPEGSSCDFTTHQNLVSNSENVGRTDDQDRKI 60

Query: 61  MHRDLERERRKQMTSLLTNLRSLLPLEFIKGRRSRVDIVDEAVNYIEYLRGRMNELHVKR 120
           MHRDLERERRKQM SLLTNLRSLLPLEFIKGRRSR D+V+EAV YIE+L+G+++ELH+KR
Sbjct: 61  MHRDLERERRKQMASLLTNLRSLLPLEFIKGRRSRADLVNEAVRYIEHLKGKISELHIKR 120

Query: 121 DAIVKRLHLESSSSCNNDIPSTSCVVIKQYSGGLEIVISNGIISEQNFQLSGVMRVLIEQ 180
           DA+ KR++L+S    NN+  S+SCVVI  YSGGLEIVIS     E+  +LSGVMRVL++Q
Sbjct: 121 DAL-KRVYLDSLGYQNNE-SSSSCVVINPYSGGLEIVIS-CCFREEKLKLSGVMRVLLQQ 180

Query: 181 SIEIETCSSTKLNERMLHTIQTKVDDPTKIDLHELKQKLYQVCN 221
           S  +++C+STK+N RM HTIQ+KVD   +ID+ EL++KLYQVCN
Sbjct: 181 STHVQSCASTKVNGRMFHTIQSKVDVSRRIDILELQRKLYQVCN 204

[Close]

BLAST of CSPI03G16380 vs. NCBI nr
Match: XP_004148147.1 (transcription factor bHLH36 [Cucumis sativus])

HSP 1 Score: 428.7 bits (1101), Expect = 3.1e-116
Identity = 222/222 (100.00%), Postives = 222/222 (100.00%), Query Frame = 0


Query: 1   MFPFNDSSHDIDDYQIHLQNLFSYQLISSQEGCSRTENLNTNSKIDETTQNEEKKIMHRD 60
           MFPFNDSSHDIDDYQIHLQNLFSYQLISSQEGCSRTENLNTNSKIDETTQNEEKKIMHRD
Sbjct: 1   MFPFNDSSHDIDDYQIHLQNLFSYQLISSQEGCSRTENLNTNSKIDETTQNEEKKIMHRD 60

Query: 61  LERERRKQMTSLLTNLRSLLPLEFIKGRRSRVDIVDEAVNYIEYLRGRMNELHVKRDAIV 120
           LERERRKQMTSLLTNLRSLLPLEFIKGRRSRVDIVDEAVNYIEYLRGRMNELHVKRDAIV
Sbjct: 61  LERERRKQMTSLLTNLRSLLPLEFIKGRRSRVDIVDEAVNYIEYLRGRMNELHVKRDAIV 120

Query: 121 KRLHLESSSSCNNDIPSTSCVVIKQYSGGLEIVISNGIISEQNFQLSGVMRVLIEQSIEI 180
           KRLHLESSSSCNNDIPSTSCVVIKQYSGGLEIVISNGIISEQNFQLSGVMRVLIEQSIEI
Sbjct: 121 KRLHLESSSSCNNDIPSTSCVVIKQYSGGLEIVISNGIISEQNFQLSGVMRVLIEQSIEI 180

Query: 181 ETCSSTKLNERMLHTIQTKVDDPTKIDLHELKQKLYQVCNSE 223
           ETCSSTKLNERMLHTIQTKVDDPTKIDLHELKQKLYQVCNSE
Sbjct: 181 ETCSSTKLNERMLHTIQTKVDDPTKIDLHELKQKLYQVCNSE 222

[Close]

BLAST of CSPI03G16380 vs. NCBI nr
Match: XP_008439139.1 (PREDICTED: transcription factor bHLH36-like [Cucumis melo] >XP_008439141.1 PREDICTED: transcription factor bHLH36-like [Cucumis melo] >XP_008439142.1 PREDICTED: transcription factor bHLH36-like [Cucumis melo] >XP_016898946.1 PREDICTED: transcription factor bHLH36-like [Cucumis melo])

HSP 1 Score: 399.4 bits (1025), Expect = 2.0e-107
Identity = 209/222 (94.14%), Postives = 218/222 (98.20%), Query Frame = 0


Query: 1   MFPFNDSSHDIDDYQIHLQNLFSYQLISSQEGCSRTENLNTNSKIDETTQNEEKKIMHRD 60
           MFPFNDSSHDID+YQIHLQNLFSYQLISSQEG S +ENLNTN+KIDETTQNEEKKIMHRD
Sbjct: 1   MFPFNDSSHDIDNYQIHLQNLFSYQLISSQEGGS-SENLNTNNKIDETTQNEEKKIMHRD 60

Query: 61  LERERRKQMTSLLTNLRSLLPLEFIKGRRSRVDIVDEAVNYIEYLRGRMNELHVKRDAIV 120
           +ERERRKQM SLLTNLRSLLPLEFIKGRRSRVDIVDEAVNYIEYLRG++NELH+KRDAIV
Sbjct: 61  VERERRKQMASLLTNLRSLLPLEFIKGRRSRVDIVDEAVNYIEYLRGKINELHLKRDAIV 120

Query: 121 KRLHLESSSSCNNDIPSTSCVVIKQYSGGLEIVISNGIISEQNFQLSGVMRVLIEQSIEI 180
           KRLHLESSSSCNNDIPSTSCVVIKQYSGGLEIVISNGIISEQNFQLSGVMRVLIEQSIEI
Sbjct: 121 KRLHLESSSSCNNDIPSTSCVVIKQYSGGLEIVISNGIISEQNFQLSGVMRVLIEQSIEI 180

Query: 181 ETCSSTKLNERMLHTIQTKVDDPTKIDLHELKQKLYQVCNSE 223
           ETCSSTKLNERML+TIQTKVDD TKIDLHELKQ+LYQVCNSE
Sbjct: 181 ETCSSTKLNERMLYTIQTKVDDSTKIDLHELKQRLYQVCNSE 221

[Close]

BLAST of CSPI03G16380 vs. NCBI nr
Match: XP_038877683.1 (transcription factor bHLH118-like [Benincasa hispida])

HSP 1 Score: 301.2 bits (770), Expect = 7.3e-78
Identity = 168/225 (74.67%), Postives = 190/225 (84.44%), Query Frame = 0


Query: 1   MFPFNDSSHDIDDYQIHLQNLFSYQLISSQEGCSRTENLNTNSKIDETTQNEEKKIMHRD 60
           MFPFND SH   DYQ HLQNLFS QLIS  EG S    LNT+ +I  TTQNEE+KIMHRD
Sbjct: 1   MFPFNDPSH--HDYQSHLQNLFSSQLISLPEGSSSDNYLNTD-RIQITTQNEERKIMHRD 60

Query: 61  LERERRKQMTSLLTNLRSLLPLEFIKGRRSRVDIVDEAVNYIEYLRGRMNELHVKRDAIV 120
           LERERRKQM SLLTNLRSLLPLEFIKG+R+R DIVDEAVNYIE+LRG+++EL VKR AI+
Sbjct: 61  LERERRKQMASLLTNLRSLLPLEFIKGKRTRADIVDEAVNYIEHLRGKISELQVKRYAIL 120

Query: 121 KRLHLESSS---SCNNDIPSTSCVVIKQYSGGLEIVISNGIISEQNFQLSGVMRVLIEQS 180
           KRL+ ESSS    C N++ S SCVVIK YSGGLEIVISN  I E+NFQLSGVMRVL EQS
Sbjct: 121 KRLNFESSSCDNQCCNNLSSPSCVVIKPYSGGLEIVISN-CIMEENFQLSGVMRVLFEQS 180

Query: 181 IEIETCSSTKLNERMLHTIQTKVDDPTKIDLHELKQKLYQVCNSE 223
           I+IE+C++TK+ ERMLHTIQTKVDD ++IDLHEL+QKLYQVCNSE
Sbjct: 181 IQIESCAATKVKERMLHTIQTKVDDSSRIDLHELQQKLYQVCNSE 221

[Close]

BLAST of CSPI03G16380 vs. NCBI nr
Match: KAG6576761.1 (Transcription factor basic helix-loop-helix 118, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 240.4 bits (612), Expect = 1.5e-59
Identity = 140/219 (63.93%), Postives = 165/219 (75.34%), Query Frame = 0


Query: 1   MFPFNDSSHDIDDYQIHLQNLFSYQLISSQEGCSRTENLNTNSKIDETTQNEEKKIMHRD 60
           MFPFN  SH    +Q+               GC  +  LN N KI E+T NE +KI+HRD
Sbjct: 1   MFPFNHPSHHHQPHQL--------------SGCEGSSELNAN-KI-ESTHNEVRKIVHRD 60

Query: 61  LERERRKQMTSLLTNLRSLLPLEFIKGRRSRVDIVDEAVNYIEYLRGRMNELHVKRDAIV 120
           LERERRKQM SLLTNLRSLLPL+ ++GRR+R DIVDEAVNYIE+LRG+M+ELHVKRDAI 
Sbjct: 61  LERERRKQMLSLLTNLRSLLPLQLVEGRRTRADIVDEAVNYIEHLRGKMSELHVKRDAI- 120

Query: 121 KRLHLESSSSCNNDIPSTSCVVIKQYSGGLEIVISNGIISEQNFQLSGVMRVLIEQSIEI 180
           K LHL   SS   D+  +SC+VIK YS GLEIVIS  I  EQN +LS VMRVL+E+SIEI
Sbjct: 121 KGLHLADESS---DLCPSSCIVIKPYSCGLEIVIS--IFREQNLELSEVMRVLLEESIEI 180

Query: 181 ETCSSTKLNERMLHTIQTKVDDPTKIDLHELKQKLYQVC 220
            +C+STK+ ERMLHTI TKVDDPT+ID+HEL+QKLYQVC
Sbjct: 181 TSCASTKVKERMLHTIHTKVDDPTRIDVHELQQKLYQVC 197

[Close]

BLAST of CSPI03G16380 vs. NCBI nr
Match: XP_022923000.1 (transcription factor bHLH118-like [Cucurbita moschata])

HSP 1 Score: 237.7 bits (605), Expect = 1.0e-58
Identity = 138/219 (63.01%), Postives = 165/219 (75.34%), Query Frame = 0


Query: 1   MFPFNDSSHDIDDYQIHLQNLFSYQLISSQEGCSRTENLNTNSKIDETTQNEEKKIMHRD 60
           MFPFN  SH    +Q+               GC  +  LN N KI E+T NE +KI+HRD
Sbjct: 1   MFPFNHPSHHHQPHQL--------------SGCEGSSELNPN-KI-ESTHNEVRKIVHRD 60

Query: 61  LERERRKQMTSLLTNLRSLLPLEFIKGRRSRVDIVDEAVNYIEYLRGRMNELHVKRDAIV 120
           LERERRKQM SLLTNLRSLLPL+ ++GRR+R DIVDEAVNYIE+ RG+++ELHVKRDAI 
Sbjct: 61  LERERRKQMLSLLTNLRSLLPLQLVEGRRTRADIVDEAVNYIEHFRGKISELHVKRDAI- 120

Query: 121 KRLHLESSSSCNNDIPSTSCVVIKQYSGGLEIVISNGIISEQNFQLSGVMRVLIEQSIEI 180
           K LHL+ SS    D+  +SCVVIK YSGGLEIVIS  I  EQN +LS VMRVL+E+SIEI
Sbjct: 121 KGLHLDESS----DLCPSSCVVIKPYSGGLEIVIS--IFREQNLELSEVMRVLLEESIEI 180

Query: 181 ETCSSTKLNERMLHTIQTKVDDPTKIDLHELKQKLYQVC 220
            +C+STK+ E MLHTI TKVDDPT+ID+HEL+QKLY+VC
Sbjct: 181 TSCASTKVKEMMLHTIHTKVDDPTRIDVHELQQKLYRVC 196

[Close]

BLAST of CSPI03G16380 vs. TAIR 10
Match: AT5G51780.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 105.5 bits (262), Expect = 5.5e-23
Identity = 69/173 (39.88%), Postives = 111/173 (64.16%), Query Frame = 0


Query: 54  KKIMHRDLERERRKQMTSLLTNLRSLLPLEFIKGRRSRVDIVDEAVNYIEYLRGRMNELH 113
           +K+MHR+ ER+RR++M SL  +LRSLLPL FIKG+RS  D V+EAVNYI+YL+ ++ EL 
Sbjct: 2   EKMMHRETERQRRQEMASLYASLRSLLPLHFIKGKRSTSDQVNEAVNYIKYLQRKIKELS 61

Query: 114 VKRDAIVKRLHLESSSSCNND-------IPSTSCVVIKQYSGGLEIVISNGIISEQNFQL 173
           V+RD ++         S N D       I   + VV++Q   G+EI++S+     Q  + 
Sbjct: 62  VRRDDLMVLSRGSLLGSSNGDFKEDVEMISGKNHVVVRQCLVGVEIMLSSRCCGGQP-RF 121

Query: 174 SGVMRVLIEQSIEIETCSSTKLNERMLHTIQTKVDD-PTKIDLHELKQKLYQV 219
           S V++VL E  + +    S+ +++R+++TIQ +V+D    IDL EL+++L ++
Sbjct: 122 SSVLQVLSEYGLCLLNSISSIVDDRLVYTIQAEVNDMALMIDLAELEKRLIRM 173

[Close]

BLAST of CSPI03G16380 vs. TAIR 10
Match: AT4G25410.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 102.4 bits (254), Expect = 4.7e-22
Identity = 63/181 (34.81%), Postives = 111/181 (61.33%), Query Frame = 0


Query: 47  ETTQN-EEKKIMHRDLERERRKQMTSLLTNLRSLLPLEFIKGRRSRVDIVDEAVNYIEYL 106
           ET  N ++KK++HRD+ER+RR++M +L   LR+ LPL++IKG+R+  D V+ AVN+I+  
Sbjct: 35  ETDDNKKKKKLLHRDIERQRRQEMATLFATLRTHLPLKYIKGKRAVSDHVNGAVNFIKDT 94

Query: 107 RGRMNELHVKRDAIVKRLHL---------ESSSSCNNDIPSTSCVVIKQYSGGLEIVISN 166
             R+ EL  +RD + +             ++ S      P+T  V+++ +  GLE+V+S+
Sbjct: 95  EARIKELSARRDELSRETGQGYKSNPDPGKTGSDVGKSEPAT--VMVQPHVSGLEVVVSS 154

Query: 167 GIISEQNFQLSGVMRVLIEQSIEIETCSSTKLNERMLHTIQTKVDDPTKIDLHELKQKLY 218
                +   LS V+  + E+ +E+ +  +T++N+R++HTIQ +V+    IDL  L+QKL 
Sbjct: 155 NSSGPEALPLSKVLETIQEKGLEVMSSFTTRVNDRLMHTIQVEVNSFGCIDLLWLQQKLV 213

[Close]

BLAST of CSPI03G16380 vs. TAIR 10
Match: AT4G25400.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 98.6 bits (244), Expect = 6.7e-21
Identity = 66/165 (40.00%), Postives = 106/165 (64.24%), Query Frame = 0


Query: 54  KKIMHRDLERERRKQMTSLLTNLRSLLPLEFIKGRRSRVDIVDEAVNYIEYLRGRMNELH 113
           +K++H+++E+ RR++M SL  +LRSLLPLEFI+G+RS  D V  AVNYI+YL+  + +++
Sbjct: 2   EKLVHKEIEKRRRQEMASLYASLRSLLPLEFIQGKRSTSDQVKGAVNYIDYLQRNIKDIN 61

Query: 114 VKRDAIV---KRLHLESSSSCNNDIPSTSCVVIKQYSGGLEIVISNGIISEQNFQLSGVM 173
            KRD +V    R    S+    N+I  ++ VVI+    G+EIV+S   I +  F  S V+
Sbjct: 62  SKRDDLVLLSGRSFRSSNEQEWNEI--SNHVVIRPCLVGIEIVLS---ILQTPF--SSVL 121

Query: 174 RVLIEQSIEIETCSSTKLNERMLHTIQTKVDDPTKIDLHELKQKL 216
           +VL E  + +     + +N+R++HT+Q +V+D   IDL +LK  L
Sbjct: 122 QVLREHGLYVLGYICSSVNDRLIHTLQAEVNDLALIDLADLKDTL 159

[Close]

BLAST of CSPI03G16380 vs. TAIR 10
Match: AT1G12540.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 97.8 bits (242), Expect = 1.1e-20
Identity = 72/204 (35.29%), Postives = 119/204 (58.33%), Query Frame = 0


Query: 30  QEGCSRTENLNTNSKIDETTQNEEKKIMHRDLERERRKQMTSLLTNLRSLLPLEFIKGRR 89
           ++ C  T  L+   K D+  +N  K+  H++LER+RR++ TSL   LR LLP ++IKG+R
Sbjct: 53  RQNCETTMTLSEIMKGDDEPKN--KRAKHKELERQRRQENTSLFKILRYLLPSQYIKGKR 112

Query: 90  SRVDIVDEAVNYIEYLRGRMNELHVKRDAIVKRL-HLES----------SSSCNNDIPST 149
           S  D V EAVNYI+ L+ ++ E+  KRD I + + H  S          SS+C+    + 
Sbjct: 113 SSADHVLEAVNYIKDLQKKIKEVSEKRDRIKRSITHPSSRGEFSIRSLASSTCSCVGDTN 172

Query: 150 SCVVIKQYSGGLEIVISNGIISEQNFQLSGVMRVLI-EQSIEIETCSSTKLNERMLHTIQ 209
             VV++    GLEIV+S    +     LS V+++L  EQ   I +C ST+L++  +HTI 
Sbjct: 173 IAVVVRPCLIGLEIVVS--CCNRHESCLSSVLQLLAQEQCFNIVSCISTRLHQGFIHTIA 232

Query: 210 TKVDDPTKIDLHELKQKLYQVCNS 222
           ++V++  ++   EL++K+ ++  S
Sbjct: 233 SEVEEGIEVYFSELQEKIIKIGTS 252

[Close]

BLAST of CSPI03G16380 vs. TAIR 10
Match: AT1G62975.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 95.1 bits (235), Expect = 7.4e-20
Identity = 71/205 (34.63%), Postives = 117/205 (57.07%), Query Frame = 0


Query: 33  CSRTENLNTNSKIDETTQNEEKKIMHRDLERERRKQMTSLLTNLRSLLPLEFIKGRRSRV 92
           C  T   N  +K D+    E KK+ HRD+ER+RR++++SL   LR+LLP ++I+G+RS  
Sbjct: 55  CDITYGANEANKNDD--DRESKKMKHRDIERQRRQEVSSLFKRLRTLLPFQYIQGKRSTS 114

Query: 93  DIVDEAVNYIEYLRGRMNELHVKRDAIVKRLHL---------ESSSSCNNDIPST----- 152
           D + +AVNYI+ L+ ++ EL+ KR+ + K +           E +SS ++   ST     
Sbjct: 115 DHIVQAVNYIKDLQIKIKELNEKRNRVKKVISATTTTHSAIEECTSSLSSSAASTLSSSC 174

Query: 153 SC-------VVIKQYSGGLEIVISNGIISEQNFQLSGVMRVLI-EQSIEIETCSSTKLNE 212
           SC       VV+     G+EI+IS   +      LS V+++L  EQ   + +C S +  +
Sbjct: 175 SCVGDKHITVVVTPCLVGVEIIIS-CCLGRNKSCLSSVLQMLAQEQRFSVVSCLSARRQQ 234

Query: 213 RMLHTIQTKVDDPTKIDLHELKQKL 216
           R +HTI ++V+D  +I++ ELK K+
Sbjct: 235 RFMHTIVSQVEDGKQINILELKDKI 256

The following BLAST results are available for this feature:

BLAST of CSPI03G16380 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FLI1	7.8e-22	39.88	Transcription factor bHLH36 OS=Arabidopsis thaliana OX=3702 GN=BHLH36 PE=2 SV=1	[more]
Q9STJ6	6.6e-21	34.81	Transcription factor bHLH126 OS=Arabidopsis thaliana OX=3702 GN=BHLH126 PE=2 SV=...	[more]
Q9STJ7	9.5e-20	40.00	Transcription factor bHLH118 OS=Arabidopsis thaliana OX=3702 GN=BHLH118 PE=2 SV=...	[more]
Q9LN95	1.6e-19	35.29	Transcription factor bHLH55 OS=Arabidopsis thaliana OX=3702 GN=BHLH55 PE=2 SV=1	[more]
Q9FLI0	1.0e-18	33.90	Transcription factor bHLH120 OS=Arabidopsis thaliana OX=3702 GN=BHLH120 PE=2 SV=...	[more]

BLAST of CSPI03G16380 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L9L0	1.5e-116	100.00	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G178580 PE=4 S...	[more]
A0A1S3AY11	9.6e-108	94.14	transcription factor bHLH36-like OS=Cucumis melo OX=3656 GN=LOC103484025 PE=4 SV...	[more]
A0A6J1EAE1	4.8e-59	63.01	transcription factor bHLH118-like OS=Cucurbita moschata OX=3662 GN=LOC111430817 ...	[more]
A0A6J1JAJ0	1.2e-57	61.54	transcription factor bHLH118-like OS=Cucurbita maxima OX=3661 GN=LOC111482745 PE...	[more]
A0A6J1CHG5	2.8e-51	55.80	transcription factor bHLH36-like OS=Momordica charantia OX=3673 GN=LOC111011678 ...	[more]

BLAST of CSPI03G16380 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004148147.1	3.1e-116	100.00	transcription factor bHLH36 [Cucumis sativus]	[more]
XP_008439139.1	2.0e-107	94.14	PREDICTED: transcription factor bHLH36-like [Cucumis melo] >XP_008439141.1 PREDI...	[more]
XP_038877683.1	7.3e-78	74.67	transcription factor bHLH118-like [Benincasa hispida]	[more]
KAG6576761.1	1.5e-59	63.93	Transcription factor basic helix-loop-helix 118, partial [Cucurbita argyrosperma...	[more]
XP_022923000.1	1.0e-58	63.01	transcription factor bHLH118-like [Cucurbita moschata]	[more]

BLAST of CSPI03G16380 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G51780.1	5.5e-23	39.88	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT4G25410.1	4.7e-22	34.81	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT4G25400.1	6.7e-21	40.00	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G12540.1	1.1e-20	35.29	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G62975.1	7.4e-20	34.63	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 59..111 e-value: 5.4E-7 score: 39.2
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 54..106 e-value: 1.1E-10 score: 41.4
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 53..105 score: 14.017632
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 44..131 e-value: 4.8E-11 score: 44.5
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 51..122
IPR015660	Achaete-scute transcription factor-related	PANTHER	PTHR13935	ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED	coord: 33..220
None	No IPR available	PANTHER	PTHR13935:SF106	TRANSCRIPTION FACTOR BHLH120-RELATED	coord: 33..220

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G16380.1	CSPI03G16380.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:2000112	regulation of cellular macromolecule biosynthetic process
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
cellular_component	GO:0090575	RNA polymerase II transcription regulator complex
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000977	RNA polymerase II transcription regulatory region sequence-specific DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity