CSPI03G15110 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI03G15110
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr3: 11263930 .. 11264388 (-)
RNA-Seq ExpressionCSPI03G15110
SyntenyCSPI03G15110
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTACGCCCCAAGTTTCCGGTGGCCGGAATTCGGTTTGTGGCTGCGGCCTGCGTCGTTCAGTTGGCCGGATTTCAGTTTCTCAAACTTCAGCATCGAGTGGAACTCTCCCAACATCAGGTGGTTTAATTTTTCAATTCTCGATGATCTCTTATGGACCTTCATCGCTCTTCTCGAATCCCTAGTTCTTCTTACAATGTTGTGCTGTTTCTTCTTGTGCTGTGGATTCACTCTCTGATTTTCTCAATTACCCATTTAGTATGTTGTATATATATATATATACACATATGTATATTCCTTTTCATCGACTTCAAAATCTTAGCAATTAGTTACATATCCTCTGTAGTTTTACTGTTTTGCGTCAAGTGTAATTTGATGGTTTCGTTCTTCATCTTCATCGATTTATGGCCGGAATCCCTAATTAGAATTGGAAAGCCTCGGATAATTGAATCGATGTGA

mRNA sequence

ATGGTACGCCCCAAGTTTCCGGTGGCCGGAATTCGGTTTGTGGCTGCGGCCTGCGTCGTTCAGTTGGCCGGATTTCAGTTTCTCAAACTTCAGCATCGAGTGGAACTCTCCCAACATCAGTTCTTCTTACAATGTTGTGCTGTTTCTTCTTGTGCTGTGGATTCACTCTCTGATTTTCTCAATTACCCATTTATTTTACTGTTTTGCGTCAAGTGTAATTTGATGGTTTCGTTCTTCATCTTCATCGATTTATGGCCGGAATCCCTAATTAGAATTGGAAAGCCTCGGATAATTGAATCGATGTGA

Coding sequence (CDS)

ATGGTACGCCCCAAGTTTCCGGTGGCCGGAATTCGGTTTGTGGCTGCGGCCTGCGTCGTTCAGTTGGCCGGATTTCAGTTTCTCAAACTTCAGCATCGAGTGGAACTCTCCCAACATCAGTTCTTCTTACAATGTTGTGCTGTTTCTTCTTGTGCTGTGGATTCACTCTCTGATTTTCTCAATTACCCATTTATTTTACTGTTTTGCGTCAAGTGTAATTTGATGGTTTCGTTCTTCATCTTCATCGATTTATGGCCGGAATCCCTAATTAGAATTGGAAAGCCTCGGATAATTGAATCGATGTGA

Protein sequence

MVRPKFPVAGIRFVAAACVVQLAGFQFLKLQHRVELSQHQFFLQCCAVSSCAVDSLSDFLNYPFILLFCVKCNLMVSFFIFIDLWPESLIRIGKPRIIESM*
Homology
[Close]
BLAST of CSPI03G15110 vs. ExPASy TrEMBL
Match: A0A0A0LAS1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G168920 PE=4 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 1.2e-49
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0 

Query: 1   MVRPKFPVAGIRFVAAACVVQLAGFQFLKLQHRVELSQHQFFLQCCAVSSCAVDSLSDFL 60
           MVRPKFPVAGIRFVAAACVVQLAGFQFLKLQHRVELSQHQFFLQCCAVSSCAVDSLSDFL
Sbjct: 1   MVRPKFPVAGIRFVAAACVVQLAGFQFLKLQHRVELSQHQFFLQCCAVSSCAVDSLSDFL 60

Query: 61  NYPFILLFCVKCNLMVSFFIFIDLWPESLIRIGKPRIIESM 102
           NYPFILLFCVKCNLMVSFFIFIDLWPESLIRIGKPRIIESM
Sbjct: 61  NYPFILLFCVKCNLMVSFFIFIDLWPESLIRIGKPRIIESM 101

[Close]
BLAST of CSPI03G15110 vs. NCBI nr
Match: KGN57181.1 (hypothetical protein Csa_010213 [Cucumis sativus])

HSP 1 Score: 205.3 bits (521), Expect = 2.5e-49
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0 

Query: 1   MVRPKFPVAGIRFVAAACVVQLAGFQFLKLQHRVELSQHQFFLQCCAVSSCAVDSLSDFL 60
           MVRPKFPVAGIRFVAAACVVQLAGFQFLKLQHRVELSQHQFFLQCCAVSSCAVDSLSDFL
Sbjct: 1   MVRPKFPVAGIRFVAAACVVQLAGFQFLKLQHRVELSQHQFFLQCCAVSSCAVDSLSDFL 60

Query: 61  NYPFILLFCVKCNLMVSFFIFIDLWPESLIRIGKPRIIESM 102
           NYPFILLFCVKCNLMVSFFIFIDLWPESLIRIGKPRIIESM
Sbjct: 61  NYPFILLFCVKCNLMVSFFIFIDLWPESLIRIGKPRIIESM 101

The following BLAST results are available for this feature:
BLAST of CSPI03G15110 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI03G15110 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LAS11.2e-49100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G168920 PE=4 SV=1[more]
BLAST of CSPI03G15110 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN57181.12.5e-49100.00hypothetical protein Csa_010213 [Cucumis sativus][more]
BLAST of CSPI03G15110 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI03G15110.1CSPI03G15110.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane