CSPI03G15070 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI03G15070
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	transcription factor bHLH147-like
Location	Chr3: 11214698 .. 11215336 (+)
RNA-Seq Expression	CSPI03G15070
Synteny	CSPI03G15070

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTCGTCTCTGATTCTGAATCCTGTGACGAGTTCTGAACGATCGCGTGATTCTTCAAGAAAGAAGAAGAAGAAGAAAGCGACAAGAGAAGATGATCGTCAAGATCAGGATCAAATCAAATGGAAATCACAAGCTCAACATCAAGTTTACTCTTCGAAGCTGTTGCGCGCTTTGAGTCAGGTCAGGATCAGTTCTCCTGAGCCAACACCAAACGAAACGCCTCGGCGTGGCCGAGCGGTGCGGGAGGCATCCGATACTGTTTTAGCCATGACGGCGAAAGGAAGAAGTAGGTGGAGCAGAGCAATCTTAACGAACCGTCTCAAGCTCAAGTTTCGAAAACACAATAAACAGAAAGCGCGTGTGATCGGAAACAGCCGTACGAAGAAGCCGAGTGTTAGCGTGTTACGGTTGAGAGGAAAAGGACTACCAACTGTACAGAGAAAAGTCCGGCTTCTCGGCCGACTAGTTCCCGGCTGCCGGAAACAACCGCTGCCGGTGATTCTAGATGAAGTAACCGATTATATTCCAGCTCTAGAGATGCAGATCCGAGTCATGAGCGCCATAGTCAACTTGGTTTCAAGCTCCTCTTCATCTTCTACTGGTATCGATTCTTCTATCCCTCCATCTTCTACCTGA

mRNA sequence

ATGGCGTCGTCTCTGATTCTGAATCCTGTGACGAGTTCTGAACGATCGCGTGATTCTTCAAGAAAGAAGAAGAAGAAGAAAGCGACAAGAGAAGATGATCGTCAAGATCAGGATCAAATCAAATGGAAATCACAAGCTCAACATCAAGTTTACTCTTCGAAGCTGTTGCGCGCTTTGAGTCAGGTCAGGATCAGTTCTCCTGAGCCAACACCAAACGAAACGCCTCGGCGTGGCCGAGCGGTGCGGGAGGCATCCGATACTGTTTTAGCCATGACGGCGAAAGGAAGAAGTAGGTGGAGCAGAGCAATCTTAACGAACCGTCTCAAGCTCAAGTTTCGAAAACACAATAAACAGAAAGCGCGTGTGATCGGAAACAGCCGTACGAAGAAGCCGAGTGTTAGCGTGTTACGGTTGAGAGGAAAAGGACTACCAACTGTACAGAGAAAAGTCCGGCTTCTCGGCCGACTAGTTCCCGGCTGCCGGAAACAACCGCTGCCGGTGATTCTAGATGAAGTAACCGATTATATTCCAGCTCTAGAGATGCAGATCCGAGTCATGAGCGCCATAGTCAACTTGGTTTCAAGCTCCTCTTCATCTTCTACTGGTATCGATTCTTCTATCCCTCCATCTTCTACCTGA

Coding sequence (CDS)

ATGGCGTCGTCTCTGATTCTGAATCCTGTGACGAGTTCTGAACGATCGCGTGATTCTTCAAGAAAGAAGAAGAAGAAGAAAGCGACAAGAGAAGATGATCGTCAAGATCAGGATCAAATCAAATGGAAATCACAAGCTCAACATCAAGTTTACTCTTCGAAGCTGTTGCGCGCTTTGAGTCAGGTCAGGATCAGTTCTCCTGAGCCAACACCAAACGAAACGCCTCGGCGTGGCCGAGCGGTGCGGGAGGCATCCGATACTGTTTTAGCCATGACGGCGAAAGGAAGAAGTAGGTGGAGCAGAGCAATCTTAACGAACCGTCTCAAGCTCAAGTTTCGAAAACACAATAAACAGAAAGCGCGTGTGATCGGAAACAGCCGTACGAAGAAGCCGAGTGTTAGCGTGTTACGGTTGAGAGGAAAAGGACTACCAACTGTACAGAGAAAAGTCCGGCTTCTCGGCCGACTAGTTCCCGGCTGCCGGAAACAACCGCTGCCGGTGATTCTAGATGAAGTAACCGATTATATTCCAGCTCTAGAGATGCAGATCCGAGTCATGAGCGCCATAGTCAACTTGGTTTCAAGCTCCTCTTCATCTTCTACTGGTATCGATTCTTCTATCCCTCCATCTTCTACCTGA

Protein sequence

MASSLILNPVTSSERSRDSSRKKKKKKATREDDRQDQDQIKWKSQAQHQVYSSKLLRALSQVRISSPEPTPNETPRRGRAVREASDTVLAMTAKGRSRWSRAILTNRLKLKFRKHNKQKARVIGNSRTKKPSVSVLRLRGKGLPTVQRKVRLLGRLVPGCRKQPLPVILDEVTDYIPALEMQIRVMSAIVNLVSSSSSSSTGIDSSIPPSST*

Homology

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BLAST of CSPI03G15070 vs. ExPASy Swiss-Prot
Match: Q9LSN7 (Transcription factor bHLH147 OS=Arabidopsis thaliana OX=3702 GN=BHLH147 PE=1 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 7.1e-41
Identity = 104/211 (49.29%), Postives = 142/211 (67.30%), Query Frame = 0


Query: 3   SSLILNPVTSSERSRDSSRKKKKKKATREDDRQDQDQI---KWKSQAQHQVYSSKLLRAL 62
           S+ +L P T+S  S  S RK+KKK +    ++     I   KW+S+ Q Q+YS+KL+ AL
Sbjct: 8   SNQLLQPTTTSSNSDRSRRKRKKKSSPSSVEKSPSPSISLEKWRSEKQQQIYSTKLVHAL 67

Query: 63  SQVRISSPEPTPNET--PRRGRAVREASDTVLAMTAKGRSRWSRAILTNRLKLKFRKHNK 122
            ++RIS    + + +  PR GRAVRE +D  LA+ A+G++ WSRAIL+  +KLKFRKH +
Sbjct: 68  RELRISQQPSSSSSSSIPRGGRAVREVADRALAVAARGKTLWSRAILSKAVKLKFRKHKR 127

Query: 123 QK-------ARVIGNSRTKKPSVSVLRLRGKGLPTVQRKVRLLGRLVPGCRKQPLPVILD 182
           Q+           G+ R+KK   +VLRL+ KGLP VQRKV++L RLVPGCRKQ LPV+L+
Sbjct: 128 QRISNPTTTTLTTGSIRSKKQRATVLRLKAKGLPAVQRKVKVLSRLVPGCRKQSLPVVLE 187

Query: 183 EVTDYIPALEMQIRVMSAIVNLVSSSSSSST 202
           E TDYI A+EMQIR M+AI++ VSSS    T
Sbjct: 188 ETTDYIAAMEMQIRTMTAILSAVSSSPPPPT 218

[Close]

BLAST of CSPI03G15070 vs. ExPASy Swiss-Prot
Match: Q9C8Z9 (Transcription factor bHLH148 OS=Arabidopsis thaliana OX=3702 GN=BHLH148 PE=1 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 7.6e-35
Identity = 96/216 (44.44%), Postives = 140/216 (64.81%), Query Frame = 0


Query: 3   SSLILNPVTSSERSRDSSRKKKKKKATREDDRQD-------QDQIKWKSQAQHQVYSSKL 62
           +SLI +    +  + D  R+KK+  A+     +        +   +W+S+ Q ++YS+KL
Sbjct: 2   ASLISDIEPPTSTTSDLVRRKKRSSASSAASSRSSASSVSGEIHARWRSEKQQRIYSAKL 61

Query: 63  LRALSQVRISSPEPTPNE--TPRRGRAVREASDTVLAMTAKGRSRWSRAILTNRLKLKFR 122
            +AL QVR++S   T +     +RG+AVREA+D  LA++A+GR+ WSRAIL NR+KLKFR
Sbjct: 62  FQALQQVRLNSSASTSSSPTAQKRGKAVREAADRALAVSARGRTLWSRAILANRIKLKFR 121

Query: 123 KHNKQKARVI----------GNSRTKKPSVSVLRLRGKGLPTVQRKVRLLGRLVPGCRKQ 182
           K  + +A +            ++R++K  VSVLRL  K +P V RKVR+LGRLVPGC KQ
Sbjct: 122 KQRRPRATMAIPAMTTVVSSSSNRSRKRRVSVLRLNKKSIPDVNRKVRVLGRLVPGCGKQ 181

Query: 183 PLPVILDEVTDYIPALEMQIRVMSAIVNLVSSSSSS 200
            +PVIL+E TDYI ALEMQ+R M+++V L+SS  S+
Sbjct: 182 SVPVILEEATDYIQALEMQVRAMNSLVQLLSSYGSA 217

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BLAST of CSPI03G15070 vs. ExPASy Swiss-Prot
Match: O80482 (Transcription factor bHLH149 OS=Arabidopsis thaliana OX=3702 GN=BHLH149 PE=1 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 2.0e-27
Identity = 83/200 (41.50%), Postives = 129/200 (64.50%), Query Frame = 0


Query: 12  SSERSRDSSRKKKKK-----KATREDDRQDQDQIK-WKSQAQHQVYSSKLLRALSQVRIS 71
           S E + +SSR+KK +     +A  E  R +++ +K WK+    Q+Y+ KL+ AL +VR  
Sbjct: 8   SIENTGESSRRKKPRISETAEAEIEARRVNEESLKRWKTNRVQQIYACKLVEALRRVRQR 67

Query: 72  SPEPTPNETPR----RGRAVREASDTVLAMTAKGRSRWSRAILTNRLKLKFRKHNKQKAR 131
           S   + NET +      R +R+ +D VLA +A+G +RWSRAIL +R++ K +KH K K +
Sbjct: 68  SSTTSNNETDKLVSGAAREIRDTADRVLAASARGTTRWSRAILASRVRAKLKKHRKAK-K 127

Query: 132 VIGNSRTKKPSVSVLRLRGKGLPTVQRKVRLLGRLVPGCRKQPLPVILDEVTDYIPALEM 191
             GN +++K      R++   LP V+RK+++LGRLVPGCRK  +P +LDE TDYI ALEM
Sbjct: 128 STGNCKSRKGLTETNRIK---LPAVERKLKILGRLVPGCRKVSVPNLLDEATDYIAALEM 187

Query: 192 QIRVMSAIVNLVSSSSSSST 202
           Q+R M A+  L+++++  +T
Sbjct: 188 QVRAMEALAELLTAAAPRTT 203

[Close]

BLAST of CSPI03G15070 vs. ExPASy Swiss-Prot
Match: Q9M9L6 (Transcription factor bHLH150 OS=Arabidopsis thaliana OX=3702 GN=BHLH150 PE=1 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 2.7e-16
Identity = 70/193 (36.27%), Postives = 95/193 (49.22%), Query Frame = 0


Query: 15  RSRDSSRKKKKKKATREDDRQDQDQIKWKSQAQHQVYSSKLLRALSQVRISSPEPTPNET 74
           RSR SS +   +  +R          +W++    +VYS KL  AL             + 
Sbjct: 46  RSRVSSEEAPVRHLSR----------RWRATTAQKVYSLKLYDAL-------------QR 105

Query: 75  PRRGRAVREASDTVLAMTAKGRSRWSRAILTNRLKLKFRKHNKQKARVIGNSRTKKPSVS 134
            RR   VR+ +D VLA TA+G +RWSRAIL +R     R+             TK  S  
Sbjct: 106 SRRSATVRDTADKVLATTARGATRWSRAILVSRFGTSLRRRR----------NTKPASAL 165

Query: 135 VLRLRGKG-------LPTVQRKVRLLGRLVPGCRKQPLPVILDEVTDYIPALEMQIRVMS 194
              +RG G       L  V  +VR+LG LVPGCR+  LP +LDE  DYI ALEMQ+R M+
Sbjct: 166 AAAIRGSGGSGRRRKLSAVGNRVRVLGGLVPGCRRTALPELLDETADYIAALEMQVRAMT 205

Query: 195 AIVNLVSSSSSSS 201
           A+  ++S    S+
Sbjct: 226 ALSKILSELQPST 205

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BLAST of CSPI03G15070 vs. ExPASy Swiss-Prot
Match: Q9SKX1 (Transcription factor IBH1 OS=Arabidopsis thaliana OX=3702 GN=IBH1 PE=1 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 3.0e-07
Identity = 45/149 (30.20%), Postives = 75/149 (50.34%), Query Frame = 0


Query: 47  QHQVYSSKLLRALSQVRISSPEPTPNETPRRGRAVREASDTVLAMTAKGRSR-WSRAILT 106
           +  V++   L++LS +R  +P  TP++   R R +++A+   +A  A G SR WSRA+L 
Sbjct: 14  EKDVFAFHFLQSLSNLRKQNPFDTPDQKNYRVRKIKKAAYVSMARAAGGSSRLWSRALL- 73

Query: 107 NRLKLKFRKHNKQKARVIGNSRTKKPSVSVLRLRGKGLPTVQRKVRLLGRLVPGCRKQPL 166
                  R+ +K   +++  SR K    S  R   +  P V+     L  LVPG      
Sbjct: 74  -------RRADKDDNKIVRFSRRKWKISSKRRRSNQRAPVVEEAAERLRNLVPGGGGMET 133

Query: 167 PVILDEVTDYIPALEMQIRVMSAIVNLVS 195
             +++E   YI  L MQ++VM  +V+ +S
Sbjct: 134 SKLMEETAHYIKCLSMQVKVMQCLVDGLS 154

[Close]

BLAST of CSPI03G15070 vs. ExPASy TrEMBL
Match: A0A0A0L965 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G168390 PE=4 SV=1)

HSP 1 Score: 380.9 bits (977), Expect = 3.4e-102
Identity = 212/212 (100.00%), Postives = 212/212 (100.00%), Query Frame = 0


Query: 1   MASSLILNPVTSSERSRDSSRKKKKKKATREDDRQDQDQIKWKSQAQHQVYSSKLLRALS 60
           MASSLILNPVTSSERSRDSSRKKKKKKATREDDRQDQDQIKWKSQAQHQVYSSKLLRALS
Sbjct: 1   MASSLILNPVTSSERSRDSSRKKKKKKATREDDRQDQDQIKWKSQAQHQVYSSKLLRALS 60

Query: 61  QVRISSPEPTPNETPRRGRAVREASDTVLAMTAKGRSRWSRAILTNRLKLKFRKHNKQKA 120
           QVRISSPEPTPNETPRRGRAVREASDTVLAMTAKGRSRWSRAILTNRLKLKFRKHNKQKA
Sbjct: 61  QVRISSPEPTPNETPRRGRAVREASDTVLAMTAKGRSRWSRAILTNRLKLKFRKHNKQKA 120

Query: 121 RVIGNSRTKKPSVSVLRLRGKGLPTVQRKVRLLGRLVPGCRKQPLPVILDEVTDYIPALE 180
           RVIGNSRTKKPSVSVLRLRGKGLPTVQRKVRLLGRLVPGCRKQPLPVILDEVTDYIPALE
Sbjct: 121 RVIGNSRTKKPSVSVLRLRGKGLPTVQRKVRLLGRLVPGCRKQPLPVILDEVTDYIPALE 180

Query: 181 MQIRVMSAIVNLVSSSSSSSTGIDSSIPPSST 213
           MQIRVMSAIVNLVSSSSSSSTGIDSSIPPSST
Sbjct: 181 MQIRVMSAIVNLVSSSSSSSTGIDSSIPPSST 212

[Close]

BLAST of CSPI03G15070 vs. ExPASy TrEMBL
Match: A0A1S3AY92 (transcription factor bHLH147-like OS=Cucumis melo OX=3656 GN=LOC103483901 PE=4 SV=1)

HSP 1 Score: 375.2 bits (962), Expect = 1.9e-100
Identity = 209/212 (98.58%), Postives = 211/212 (99.53%), Query Frame = 0


Query: 1   MASSLILNPVTSSERSRDSSRKKKKKKATREDDRQDQDQIKWKSQAQHQVYSSKLLRALS 60
           MASSLILNPVTSSERSRDSSRKKKKKKATREDDRQDQDQIKWKSQAQHQVYSSKLLRALS
Sbjct: 1   MASSLILNPVTSSERSRDSSRKKKKKKATREDDRQDQDQIKWKSQAQHQVYSSKLLRALS 60

Query: 61  QVRISSPEPTPNETPRRGRAVREASDTVLAMTAKGRSRWSRAILTNRLKLKFRKHNKQKA 120
           QVRISSPEPTPNETPRRGRAVREASDTVLAMTAKGRSRWSRAILTNRLKLKFRKHNKQKA
Sbjct: 61  QVRISSPEPTPNETPRRGRAVREASDTVLAMTAKGRSRWSRAILTNRLKLKFRKHNKQKA 120

Query: 121 RVIGNSRTKKPSVSVLRLRGKGLPTVQRKVRLLGRLVPGCRKQPLPVILDEVTDYIPALE 180
           RV+GNSRTKKPSVSVLRLRGKGLPTVQRKVRLLGRLVPGCRKQPLPVILDEVTDYIPALE
Sbjct: 121 RVMGNSRTKKPSVSVLRLRGKGLPTVQRKVRLLGRLVPGCRKQPLPVILDEVTDYIPALE 180

Query: 181 MQIRVMSAIVNLVSSSSSSSTGIDSSIPPSST 213
           MQIRVMSAIVNLVSSSSSSS+GIDSSI PSST
Sbjct: 181 MQIRVMSAIVNLVSSSSSSSSGIDSSISPSST 212

[Close]

BLAST of CSPI03G15070 vs. ExPASy TrEMBL
Match: A0A5D3CWF6 (Transcription factor bHLH147-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G001600 PE=4 SV=1)

HSP 1 Score: 372.9 bits (956), Expect = 9.2e-100
Identity = 208/212 (98.11%), Postives = 210/212 (99.06%), Query Frame = 0


Query: 1   MASSLILNPVTSSERSRDSSRKKKKKKATREDDRQDQDQIKWKSQAQHQVYSSKLLRALS 60
           MASSLILNPVTSSERSRDSSRKKKKKKATREDDRQDQDQIKWKSQAQHQVYSSKLLRALS
Sbjct: 1   MASSLILNPVTSSERSRDSSRKKKKKKATREDDRQDQDQIKWKSQAQHQVYSSKLLRALS 60

Query: 61  QVRISSPEPTPNETPRRGRAVREASDTVLAMTAKGRSRWSRAILTNRLKLKFRKHNKQKA 120
           QVRISSPEP PNETPRRGRAVREASDTVLAMTAKGRSRWSRAILTNRLKLKFRKHNKQKA
Sbjct: 61  QVRISSPEPKPNETPRRGRAVREASDTVLAMTAKGRSRWSRAILTNRLKLKFRKHNKQKA 120

Query: 121 RVIGNSRTKKPSVSVLRLRGKGLPTVQRKVRLLGRLVPGCRKQPLPVILDEVTDYIPALE 180
           RV+GNSRTKKPSVSVLRLRGKGLPTVQRKVRLLGRLVPGCRKQPLPVILDEVTDYIPALE
Sbjct: 121 RVMGNSRTKKPSVSVLRLRGKGLPTVQRKVRLLGRLVPGCRKQPLPVILDEVTDYIPALE 180

Query: 181 MQIRVMSAIVNLVSSSSSSSTGIDSSIPPSST 213
           MQIRVMSAIVNLVSSSSSSS+GIDSSI PSST
Sbjct: 181 MQIRVMSAIVNLVSSSSSSSSGIDSSISPSST 212

[Close]

BLAST of CSPI03G15070 vs. ExPASy TrEMBL
Match: A0A6J1IXY5 (transcription factor bHLH147-like OS=Cucurbita maxima OX=3661 GN=LOC111479472 PE=4 SV=1)

HSP 1 Score: 331.3 bits (848), Expect = 3.1e-87
Identity = 188/213 (88.26%), Postives = 195/213 (91.55%), Query Frame = 0


Query: 1   MASSLILNPVTSSERSRDSSR-KKKKKKATREDDRQDQDQIKWKSQAQHQVYSSKLLRAL 60
           MASS+ILNPV SSERSRDSSR KKKKKK  RE+DRQ QD I+WKSQAQHQVYSSKLLRAL
Sbjct: 1   MASSMILNPVASSERSRDSSRKKKKKKKVARENDRQGQDHIQWKSQAQHQVYSSKLLRAL 60

Query: 61  SQVRISSPEPTPNETPRRGRAVREASDTVLAMTAKGRSRWSRAILTNRLKLKFRKHNKQK 120
           SQVRISS E  PNETPRRGRAVREASDTVLAMTAKGRSRWSRAILTNRLKLKFRKHN+QK
Sbjct: 61  SQVRISSSESAPNETPRRGRAVREASDTVLAMTAKGRSRWSRAILTNRLKLKFRKHNRQK 120

Query: 121 ARVIGNSRTKKPSVSVLRLRGKGLPTVQRKVRLLGRLVPGCRKQPLPVILDEVTDYIPAL 180
           A   GNSRTKKP VSV RLRGKGLPT+Q K RLLGRLVPGCRKQPLPVILDEVTDYIPAL
Sbjct: 121 AHATGNSRTKKPRVSVFRLRGKGLPTLQSKARLLGRLVPGCRKQPLPVILDEVTDYIPAL 180

Query: 181 EMQIRVMSAIVNLVSSSSSSSTGIDSSIPPSST 213
           EMQIRVMSAIVNLVSSSSSSS+G+DSSI P ST
Sbjct: 181 EMQIRVMSAIVNLVSSSSSSSSGMDSSISPPST 213

[Close]

BLAST of CSPI03G15070 vs. ExPASy TrEMBL
Match: A0A6J1GWC5 (transcription factor bHLH148-like OS=Cucurbita moschata OX=3662 GN=LOC111457480 PE=4 SV=1)

HSP 1 Score: 325.9 bits (834), Expect = 1.3e-85
Identity = 182/206 (88.35%), Postives = 189/206 (91.75%), Query Frame = 0


Query: 1   MASSLILNPVTSSERSRDSSRKKKKKKATREDDRQDQDQIKWKSQAQHQVYSSKLLRALS 60
           MASS+ILNPV SSERSRDSSRKKKKKKA RE+DRQ QD I+WKSQAQHQVYSSKLLRALS
Sbjct: 1   MASSMILNPVASSERSRDSSRKKKKKKAARENDRQGQDHIQWKSQAQHQVYSSKLLRALS 60

Query: 61  QVRISSPEPTPNETPRRGRAVREASDTVLAMTAKGRSRWSRAILTNRLKLKFRKHNKQKA 120
           QVRISS E  PNETPRRGRAVREASDTVLAMTAKGRSRWSRAILTNRLKLKFRKHN+QKA
Sbjct: 61  QVRISSSESAPNETPRRGRAVREASDTVLAMTAKGRSRWSRAILTNRLKLKFRKHNRQKA 120

Query: 121 RVIGNSRTKKPSVSVLRLRGKGLPTVQRKVRLLGRLVPGCRKQPLPVILDEVTDYIPALE 180
              GNSRTKKP VSV RLRGKGLPT+Q K RLLGRLVPGCRKQPLPVILDEVTDYIPALE
Sbjct: 121 HATGNSRTKKPRVSVFRLRGKGLPTIQSKARLLGRLVPGCRKQPLPVILDEVTDYIPALE 180

Query: 181 MQIRVMSAIVNLVSSSSSSSTGIDSS 207
           MQIRVMSAIVNLVSSSSSSS+   S+
Sbjct: 181 MQIRVMSAIVNLVSSSSSSSSSSSSA 206

[Close]

BLAST of CSPI03G15070 vs. NCBI nr
Match: XP_004134249.1 (transcription factor bHLH147-like [Cucumis sativus] >XP_031738990.1 transcription factor bHLH147-like [Cucumis sativus] >KGN57177.1 hypothetical protein Csa_010188 [Cucumis sativus])

HSP 1 Score: 380.9 bits (977), Expect = 7.0e-102
Identity = 212/212 (100.00%), Postives = 212/212 (100.00%), Query Frame = 0


Query: 1   MASSLILNPVTSSERSRDSSRKKKKKKATREDDRQDQDQIKWKSQAQHQVYSSKLLRALS 60
           MASSLILNPVTSSERSRDSSRKKKKKKATREDDRQDQDQIKWKSQAQHQVYSSKLLRALS
Sbjct: 1   MASSLILNPVTSSERSRDSSRKKKKKKATREDDRQDQDQIKWKSQAQHQVYSSKLLRALS 60

Query: 61  QVRISSPEPTPNETPRRGRAVREASDTVLAMTAKGRSRWSRAILTNRLKLKFRKHNKQKA 120
           QVRISSPEPTPNETPRRGRAVREASDTVLAMTAKGRSRWSRAILTNRLKLKFRKHNKQKA
Sbjct: 61  QVRISSPEPTPNETPRRGRAVREASDTVLAMTAKGRSRWSRAILTNRLKLKFRKHNKQKA 120

Query: 121 RVIGNSRTKKPSVSVLRLRGKGLPTVQRKVRLLGRLVPGCRKQPLPVILDEVTDYIPALE 180
           RVIGNSRTKKPSVSVLRLRGKGLPTVQRKVRLLGRLVPGCRKQPLPVILDEVTDYIPALE
Sbjct: 121 RVIGNSRTKKPSVSVLRLRGKGLPTVQRKVRLLGRLVPGCRKQPLPVILDEVTDYIPALE 180

Query: 181 MQIRVMSAIVNLVSSSSSSSTGIDSSIPPSST 213
           MQIRVMSAIVNLVSSSSSSSTGIDSSIPPSST
Sbjct: 181 MQIRVMSAIVNLVSSSSSSSTGIDSSIPPSST 212

[Close]

BLAST of CSPI03G15070 vs. NCBI nr
Match: XP_008438966.1 (PREDICTED: transcription factor bHLH147-like [Cucumis melo] >XP_008438967.1 PREDICTED: transcription factor bHLH147-like [Cucumis melo])

HSP 1 Score: 375.2 bits (962), Expect = 3.8e-100
Identity = 209/212 (98.58%), Postives = 211/212 (99.53%), Query Frame = 0


Query: 1   MASSLILNPVTSSERSRDSSRKKKKKKATREDDRQDQDQIKWKSQAQHQVYSSKLLRALS 60
           MASSLILNPVTSSERSRDSSRKKKKKKATREDDRQDQDQIKWKSQAQHQVYSSKLLRALS
Sbjct: 1   MASSLILNPVTSSERSRDSSRKKKKKKATREDDRQDQDQIKWKSQAQHQVYSSKLLRALS 60

Query: 61  QVRISSPEPTPNETPRRGRAVREASDTVLAMTAKGRSRWSRAILTNRLKLKFRKHNKQKA 120
           QVRISSPEPTPNETPRRGRAVREASDTVLAMTAKGRSRWSRAILTNRLKLKFRKHNKQKA
Sbjct: 61  QVRISSPEPTPNETPRRGRAVREASDTVLAMTAKGRSRWSRAILTNRLKLKFRKHNKQKA 120

Query: 121 RVIGNSRTKKPSVSVLRLRGKGLPTVQRKVRLLGRLVPGCRKQPLPVILDEVTDYIPALE 180
           RV+GNSRTKKPSVSVLRLRGKGLPTVQRKVRLLGRLVPGCRKQPLPVILDEVTDYIPALE
Sbjct: 121 RVMGNSRTKKPSVSVLRLRGKGLPTVQRKVRLLGRLVPGCRKQPLPVILDEVTDYIPALE 180

Query: 181 MQIRVMSAIVNLVSSSSSSSTGIDSSIPPSST 213
           MQIRVMSAIVNLVSSSSSSS+GIDSSI PSST
Sbjct: 181 MQIRVMSAIVNLVSSSSSSSSGIDSSISPSST 212

[Close]

BLAST of CSPI03G15070 vs. NCBI nr
Match: KAA0049554.1 (transcription factor bHLH147-like protein [Cucumis melo var. makuwa] >TYK16231.1 transcription factor bHLH147-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 372.9 bits (956), Expect = 1.9e-99
Identity = 208/212 (98.11%), Postives = 210/212 (99.06%), Query Frame = 0


Query: 1   MASSLILNPVTSSERSRDSSRKKKKKKATREDDRQDQDQIKWKSQAQHQVYSSKLLRALS 60
           MASSLILNPVTSSERSRDSSRKKKKKKATREDDRQDQDQIKWKSQAQHQVYSSKLLRALS
Sbjct: 1   MASSLILNPVTSSERSRDSSRKKKKKKATREDDRQDQDQIKWKSQAQHQVYSSKLLRALS 60

Query: 61  QVRISSPEPTPNETPRRGRAVREASDTVLAMTAKGRSRWSRAILTNRLKLKFRKHNKQKA 120
           QVRISSPEP PNETPRRGRAVREASDTVLAMTAKGRSRWSRAILTNRLKLKFRKHNKQKA
Sbjct: 61  QVRISSPEPKPNETPRRGRAVREASDTVLAMTAKGRSRWSRAILTNRLKLKFRKHNKQKA 120

Query: 121 RVIGNSRTKKPSVSVLRLRGKGLPTVQRKVRLLGRLVPGCRKQPLPVILDEVTDYIPALE 180
           RV+GNSRTKKPSVSVLRLRGKGLPTVQRKVRLLGRLVPGCRKQPLPVILDEVTDYIPALE
Sbjct: 121 RVMGNSRTKKPSVSVLRLRGKGLPTVQRKVRLLGRLVPGCRKQPLPVILDEVTDYIPALE 180

Query: 181 MQIRVMSAIVNLVSSSSSSSTGIDSSIPPSST 213
           MQIRVMSAIVNLVSSSSSSS+GIDSSI PSST
Sbjct: 181 MQIRVMSAIVNLVSSSSSSSSGIDSSISPSST 212

[Close]

BLAST of CSPI03G15070 vs. NCBI nr
Match: XP_038886807.1 (transcription factor bHLH147-like [Benincasa hispida] >XP_038886886.1 transcription factor bHLH147-like [Benincasa hispida])

HSP 1 Score: 350.9 bits (899), Expect = 7.7e-93
Identity = 198/207 (95.65%), Postives = 201/207 (97.10%), Query Frame = 0


Query: 1   MASSLILNPVTSSERSRDSSRKKKKKKATREDDRQDQDQIKWKSQAQHQVYSSKLLRALS 60
           MASSLILNPV SSERSRDSSRKKKKKKA REDDRQDQDQIKWKSQAQHQVYSSKLLRALS
Sbjct: 1   MASSLILNPVASSERSRDSSRKKKKKKAAREDDRQDQDQIKWKSQAQHQVYSSKLLRALS 60

Query: 61  QVRISSPEPTPNETPRRGRAVREASDTVLAMTAKGRSRWSRAILTNRLKLKFR-KHNKQK 120
           QVRISSPE TPNE PRRGRAVREASDTVLAMTAKGRSRWSRAILTNRLKLKFR KHN+QK
Sbjct: 61  QVRISSPESTPNEMPRRGRAVREASDTVLAMTAKGRSRWSRAILTNRLKLKFRNKHNRQK 120

Query: 121 ARVIGNSRTKKPSVSVLRLRGKGLPTVQRKVRLLGRLVPGCRKQPLPVILDEVTDYIPAL 180
           ARV GNSRTKKPSVSVLRLRGKGLPTVQRKVRLLGRLVPGCRKQPLPVILDEVTDYIPAL
Sbjct: 121 ARVAGNSRTKKPSVSVLRLRGKGLPTVQRKVRLLGRLVPGCRKQPLPVILDEVTDYIPAL 180

Query: 181 EMQIRVMSAIVNLVSSSSSSSTGIDSS 207
           EMQIRV+SAIVNLVSSSSSSS+GIDSS
Sbjct: 181 EMQIRVLSAIVNLVSSSSSSSSGIDSS 207

[Close]

BLAST of CSPI03G15070 vs. NCBI nr
Match: XP_023529070.1 (transcription factor bHLH147-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 331.6 bits (849), Expect = 4.8e-87
Identity = 189/216 (87.50%), Postives = 196/216 (90.74%), Query Frame = 0


Query: 1   MASSLILNPVTSSERSRDSSRKKKKKKATREDDRQDQDQIKWKSQAQHQVYSSKLLRALS 60
           MASS+ILNPV SSERSRDSSRKKKKKKA RE+DRQ QD I+WKSQAQHQVYSSKLLRALS
Sbjct: 1   MASSMILNPVASSERSRDSSRKKKKKKAARENDRQGQDHIQWKSQAQHQVYSSKLLRALS 60

Query: 61  QVRISSPEPTPNETPRRGRAVREASDTVLAMTAKGRSRWSRAILTNRLKLKFRKHNKQKA 120
           QVRISS E  PNETPRRGRAVREASDTVLAMTAKGRSRWSRAILTNRLKLKFRKHN+QKA
Sbjct: 61  QVRISSSESAPNETPRRGRAVREASDTVLAMTAKGRSRWSRAILTNRLKLKFRKHNRQKA 120

Query: 121 RVIGNSRTKKPSVSVLRLRGKGLPTVQRKVRLLGRLVPGCRKQPLPVILDEVTDYIPALE 180
              GNSRTKKP VSV RLRGKGLPT+Q K RLLGRLVPGCRKQPLPVILDEVTDYIPALE
Sbjct: 121 HATGNSRTKKPRVSVFRLRGKGLPTLQSKARLLGRLVPGCRKQPLPVILDEVTDYIPALE 180

Query: 181 MQIRVMSAIVNLV----SSSSSSSTGIDSSIPPSST 213
           MQIRVMSAIVNLV    SSSSSSS+G+DSSI P ST
Sbjct: 181 MQIRVMSAIVNLVSSSSSSSSSSSSGMDSSISPPST 216

[Close]

BLAST of CSPI03G15070 vs. TAIR 10
Match: AT3G17100.1 (sequence-specific DNA binding transcription factors )

HSP 1 Score: 168.7 bits (426), Expect = 5.1e-42
Identity = 104/211 (49.29%), Postives = 142/211 (67.30%), Query Frame = 0


Query: 3   SSLILNPVTSSERSRDSSRKKKKKKATREDDRQDQDQI---KWKSQAQHQVYSSKLLRAL 62
           S+ +L P T+S  S  S RK+KKK +    ++     I   KW+S+ Q Q+YS+KL+ AL
Sbjct: 8   SNQLLQPTTTSSNSDRSRRKRKKKSSPSSVEKSPSPSISLEKWRSEKQQQIYSTKLVHAL 67

Query: 63  SQVRISSPEPTPNET--PRRGRAVREASDTVLAMTAKGRSRWSRAILTNRLKLKFRKHNK 122
            ++RIS    + + +  PR GRAVRE +D  LA+ A+G++ WSRAIL+  +KLKFRKH +
Sbjct: 68  RELRISQQPSSSSSSSIPRGGRAVREVADRALAVAARGKTLWSRAILSKAVKLKFRKHKR 127

Query: 123 QK-------ARVIGNSRTKKPSVSVLRLRGKGLPTVQRKVRLLGRLVPGCRKQPLPVILD 182
           Q+           G+ R+KK   +VLRL+ KGLP VQRKV++L RLVPGCRKQ LPV+L+
Sbjct: 128 QRISNPTTTTLTTGSIRSKKQRATVLRLKAKGLPAVQRKVKVLSRLVPGCRKQSLPVVLE 187

Query: 183 EVTDYIPALEMQIRVMSAIVNLVSSSSSSST 202
           E TDYI A+EMQIR M+AI++ VSSS    T
Sbjct: 188 ETTDYIAAMEMQIRTMTAILSAVSSSPPPPT 218

[Close]

BLAST of CSPI03G15070 vs. TAIR 10
Match: AT3G17100.2 (sequence-specific DNA binding transcription factors )

HSP 1 Score: 168.7 bits (426), Expect = 5.1e-42
Identity = 104/211 (49.29%), Postives = 142/211 (67.30%), Query Frame = 0


Query: 3   SSLILNPVTSSERSRDSSRKKKKKKATREDDRQDQDQI---KWKSQAQHQVYSSKLLRAL 62
           S+ +L P T+S  S  S RK+KKK +    ++     I   KW+S+ Q Q+YS+KL+ AL
Sbjct: 8   SNQLLQPTTTSSNSDRSRRKRKKKSSPSSVEKSPSPSISLEKWRSEKQQQIYSTKLVHAL 67

Query: 63  SQVRISSPEPTPNET--PRRGRAVREASDTVLAMTAKGRSRWSRAILTNRLKLKFRKHNK 122
            ++RIS    + + +  PR GRAVRE +D  LA+ A+G++ WSRAIL+  +KLKFRKH +
Sbjct: 68  RELRISQQPSSSSSSSIPRGGRAVREVADRALAVAARGKTLWSRAILSKAVKLKFRKHKR 127

Query: 123 QK-------ARVIGNSRTKKPSVSVLRLRGKGLPTVQRKVRLLGRLVPGCRKQPLPVILD 182
           Q+           G+ R+KK   +VLRL+ KGLP VQRKV++L RLVPGCRKQ LPV+L+
Sbjct: 128 QRISNPTTTTLTTGSIRSKKQRATVLRLKAKGLPAVQRKVKVLSRLVPGCRKQSLPVVLE 187

Query: 183 EVTDYIPALEMQIRVMSAIVNLVSSSSSSST 202
           E TDYI A+EMQIR M+AI++ VSSS    T
Sbjct: 188 ETTDYIAAMEMQIRTMTAILSAVSSSPPPPT 218

[Close]

BLAST of CSPI03G15070 vs. TAIR 10
Match: AT3G06590.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 148.7 bits (374), Expect = 5.4e-36
Identity = 96/216 (44.44%), Postives = 140/216 (64.81%), Query Frame = 0


Query: 3   SSLILNPVTSSERSRDSSRKKKKKKATREDDRQD-------QDQIKWKSQAQHQVYSSKL 62
           +SLI +    +  + D  R+KK+  A+     +        +   +W+S+ Q ++YS+KL
Sbjct: 2   ASLISDIEPPTSTTSDLVRRKKRSSASSAASSRSSASSVSGEIHARWRSEKQQRIYSAKL 61

Query: 63  LRALSQVRISSPEPTPNE--TPRRGRAVREASDTVLAMTAKGRSRWSRAILTNRLKLKFR 122
            +AL QVR++S   T +     +RG+AVREA+D  LA++A+GR+ WSRAIL NR+KLKFR
Sbjct: 62  FQALQQVRLNSSASTSSSPTAQKRGKAVREAADRALAVSARGRTLWSRAILANRIKLKFR 121

Query: 123 KHNKQKARVI----------GNSRTKKPSVSVLRLRGKGLPTVQRKVRLLGRLVPGCRKQ 182
           K  + +A +            ++R++K  VSVLRL  K +P V RKVR+LGRLVPGC KQ
Sbjct: 122 KQRRPRATMAIPAMTTVVSSSSNRSRKRRVSVLRLNKKSIPDVNRKVRVLGRLVPGCGKQ 181

Query: 183 PLPVILDEVTDYIPALEMQIRVMSAIVNLVSSSSSS 200
            +PVIL+E TDYI ALEMQ+R M+++V L+SS  S+
Sbjct: 182 SVPVILEEATDYIQALEMQVRAMNSLVQLLSSYGSA 217

[Close]

BLAST of CSPI03G15070 vs. TAIR 10
Match: AT3G06590.2 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 148.7 bits (374), Expect = 5.4e-36
Identity = 96/216 (44.44%), Postives = 140/216 (64.81%), Query Frame = 0


Query: 3   SSLILNPVTSSERSRDSSRKKKKKKATREDDRQD-------QDQIKWKSQAQHQVYSSKL 62
           +SLI +    +  + D  R+KK+  A+     +        +   +W+S+ Q ++YS+KL
Sbjct: 2   ASLISDIEPPTSTTSDLVRRKKRSSASSAASSRSSASSVSGEIHARWRSEKQQRIYSAKL 61

Query: 63  LRALSQVRISSPEPTPNE--TPRRGRAVREASDTVLAMTAKGRSRWSRAILTNRLKLKFR 122
            +AL QVR++S   T +     +RG+AVREA+D  LA++A+GR+ WSRAIL NR+KLKFR
Sbjct: 62  FQALQQVRLNSSASTSSSPTAQKRGKAVREAADRALAVSARGRTLWSRAILANRIKLKFR 121

Query: 123 KHNKQKARVI----------GNSRTKKPSVSVLRLRGKGLPTVQRKVRLLGRLVPGCRKQ 182
           K  + +A +            ++R++K  VSVLRL  K +P V RKVR+LGRLVPGC KQ
Sbjct: 122 KQRRPRATMAIPAMTTVVSSSSNRSRKRRVSVLRLNKKSIPDVNRKVRVLGRLVPGCGKQ 181

Query: 183 PLPVILDEVTDYIPALEMQIRVMSAIVNLVSSSSSS 200
            +PVIL+E TDYI ALEMQ+R M+++V L+SS  S+
Sbjct: 182 SVPVILEEATDYIQALEMQVRAMNSLVQLLSSYGSA 217

[Close]

BLAST of CSPI03G15070 vs. TAIR 10
Match: AT1G09250.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 124.0 bits (310), Expect = 1.4e-28
Identity = 83/200 (41.50%), Postives = 129/200 (64.50%), Query Frame = 0


Query: 12  SSERSRDSSRKKKKK-----KATREDDRQDQDQIK-WKSQAQHQVYSSKLLRALSQVRIS 71
           S E + +SSR+KK +     +A  E  R +++ +K WK+    Q+Y+ KL+ AL +VR  
Sbjct: 8   SIENTGESSRRKKPRISETAEAEIEARRVNEESLKRWKTNRVQQIYACKLVEALRRVRQR 67

Query: 72  SPEPTPNETPR----RGRAVREASDTVLAMTAKGRSRWSRAILTNRLKLKFRKHNKQKAR 131
           S   + NET +      R +R+ +D VLA +A+G +RWSRAIL +R++ K +KH K K +
Sbjct: 68  SSTTSNNETDKLVSGAAREIRDTADRVLAASARGTTRWSRAILASRVRAKLKKHRKAK-K 127

Query: 132 VIGNSRTKKPSVSVLRLRGKGLPTVQRKVRLLGRLVPGCRKQPLPVILDEVTDYIPALEM 191
             GN +++K      R++   LP V+RK+++LGRLVPGCRK  +P +LDE TDYI ALEM
Sbjct: 128 STGNCKSRKGLTETNRIK---LPAVERKLKILGRLVPGCRKVSVPNLLDEATDYIAALEM 187

Query: 192 QIRVMSAIVNLVSSSSSSST 202
           Q+R M A+  L+++++  +T
Sbjct: 188 QVRAMEALAELLTAAAPRTT 203

The following BLAST results are available for this feature:

BLAST of CSPI03G15070 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LSN7	7.1e-41	49.29	Transcription factor bHLH147 OS=Arabidopsis thaliana OX=3702 GN=BHLH147 PE=1 SV=...	[more]
Q9C8Z9	7.6e-35	44.44	Transcription factor bHLH148 OS=Arabidopsis thaliana OX=3702 GN=BHLH148 PE=1 SV=...	[more]
O80482	2.0e-27	41.50	Transcription factor bHLH149 OS=Arabidopsis thaliana OX=3702 GN=BHLH149 PE=1 SV=...	[more]
Q9M9L6	2.7e-16	36.27	Transcription factor bHLH150 OS=Arabidopsis thaliana OX=3702 GN=BHLH150 PE=1 SV=...	[more]
Q9SKX1	3.0e-07	30.20	Transcription factor IBH1 OS=Arabidopsis thaliana OX=3702 GN=IBH1 PE=1 SV=1	[more]

BLAST of CSPI03G15070 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L965	3.4e-102	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G168390 PE=4 SV=1	[more]
A0A1S3AY92	1.9e-100	98.58	transcription factor bHLH147-like OS=Cucumis melo OX=3656 GN=LOC103483901 PE=4 S...	[more]
A0A5D3CWF6	9.2e-100	98.11	Transcription factor bHLH147-like protein OS=Cucumis melo var. makuwa OX=1194695...	[more]
A0A6J1IXY5	3.1e-87	88.26	transcription factor bHLH147-like OS=Cucurbita maxima OX=3661 GN=LOC111479472 PE...	[more]
A0A6J1GWC5	1.3e-85	88.35	transcription factor bHLH148-like OS=Cucurbita moschata OX=3662 GN=LOC111457480 ...	[more]

BLAST of CSPI03G15070 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004134249.1	7.0e-102	100.00	transcription factor bHLH147-like [Cucumis sativus] >XP_031738990.1 transcriptio...	[more]
XP_008438966.1	3.8e-100	98.58	PREDICTED: transcription factor bHLH147-like [Cucumis melo] >XP_008438967.1 PRED...	[more]
KAA0049554.1	1.9e-99	98.11	transcription factor bHLH147-like protein [Cucumis melo var. makuwa] >TYK16231.1...	[more]
XP_038886807.1	7.7e-93	95.65	transcription factor bHLH147-like [Benincasa hispida] >XP_038886886.1 transcript...	[more]
XP_023529070.1	4.8e-87	87.50	transcription factor bHLH147-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CSPI03G15070 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G17100.1	5.1e-42	49.29	sequence-specific DNA binding transcription factors	[more]
AT3G17100.2	5.1e-42	49.29	sequence-specific DNA binding transcription factors	[more]
AT3G06590.1	5.4e-36	44.44	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G06590.2	5.4e-36	44.44	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G09250.1	1.4e-28	41.50	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 61..85
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 25..41
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..47
None	No IPR available	PANTHER	PTHR33124:SF78	TRANSCRIPTION FACTOR BHLH148-LIKE ISOFORM X1	coord: 7..209
IPR044660	Transcription factor IBH1-like	PANTHER	PTHR33124	TRANSCRIPTION FACTOR IBH1-LIKE 1	coord: 7..209
IPR044549	Transcription factor IBH1-like, bHLH domain	CDD	cd11444	bHLH_AtIBH1_like	coord: 135..190 e-value: 3.01439E-15 score: 65.3364

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G15070.1	CSPI03G15070.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000976	transcription cis-regulatory region binding