CSPI03G14790 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI03G14790
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	leucine-rich repeat extensin-like protein 6
Location	Chr3: 11004675 .. 11005794 (+)
RNA-Seq Expression	CSPI03G14790
Synteny	CSPI03G14790

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAACCCCTTCCAATTAAAAACCAATCCCACTGTTTCTAAAAAACCACATACCTTCACTTCACTTCACTAATCTCCTTTGTAATTCCATTTCCCACCCTCTCTCTTCCCCCCACAATGGAAACTCCCATTCCTCTCCAATTTCTCATCTCTCTCACCGCGCTTCTCCTCCTTTTTCCCTCCGGAATTTCATCTCTTCCGGTCTTCCACCCCCGCTCCTCCGCCGGTGCTAAGTACCAAATTGAATGCACAATGTGCTCTGCTTGTGACAATCCTTGCGCTCAGTATCTATCTCCCCCACCTCCTCCACCGTCTCCTCCTCCCCCCGTCAACTGTCCGCCCCCGCCTTCTCCTCCCAGCTCCGGCACCTACGACTACTACTCTCCCCCCCCACCAGCTCAACCCTCTTACACATACTCCTCCCCGCCGCCGCCGGGTGGAATCATCGGACCCGGGGGGTACTACCAGCCCCCGCCGTATAGTAATTACCCAGCTCCCCCGCCTCCCAATCCCATTGTCCCATACTTCCCATTTTTTTACCATACTCCACCGCCGGGCTCTTCCGCCGCCGTCCCCCGTTTGACGAATTCCTTGCCTTGCTCTGTTCTTACCGTTGCCCTGTTTTCCTTTTTACTTGCTTTGTTTTAAATGCAAATAACAGCAGACAGAAACTTGCAATAATGGCGGATTTTGCAGATCTGGGAAATTGATGGAGCTAAATGAGAAAGAGAAATTGAGAAAAAAGAAAAAGGGTTTCGATCTTCGAAGAAGACGATGAGAAATTCACTTCAAGAATTTGCATTCTGTTGGGGTAAAGAAATTTTCTTTCTCATCCGGAAATTTCCTCTGAATCTCTTTCTTTTTACTTGACTCCATTGTTATTAGATTGATTTGTAATCTGCTGATTATATATAAATTGTATGTGTTTTTACTTGTATTCTTAACTCAATTCCTCAAAAAGCAAATCTGTATGTATCGAATATCTTCTTTATGTTTGTCATTTCAATTATATTTTTAAAGAACTGAATAACAGTGTTGGGACAGTGATTTTTTTATGTTCTTGATTTGTTCATCAATGGCGGATATGGGTCTAATCATTTTAGTTTGTAATTGTTGAAATTAA

mRNA sequence

CAACCCCTTCCAATTAAAAACCAATCCCACTGTTTCTAAAAAACCACATACCTTCACTTCACTTCACTAATCTCCTTTGTAATTCCATTTCCCACCCTCTCTCTTCCCCCCACAATGGAAACTCCCATTCCTCTCCAATTTCTCATCTCTCTCACCGCGCTTCTCCTCCTTTTTCCCTCCGGAATTTCATCTCTTCCGGTCTTCCACCCCCGCTCCTCCGCCGGTGCTAAGTACCAAATTGAATGCACAATGTGCTCTGCTTGTGACAATCCTTGCGCTCAGTATCTATCTCCCCCACCTCCTCCACCGTCTCCTCCTCCCCCCGTCAACTGTCCGCCCCCGCCTTCTCCTCCCAGCTCCGGCACCTACGACTACTACTCTCCCCCCCCACCAGCTCAACCCTCTTACACATACTCCTCCCCGCCGCCGCCGGGTGGAATCATCGGACCCGGGGGGTACTACCAGCCCCCGCCGTATAGTAATTACCCAGCTCCCCCGCCTCCCAATCCCATTGTCCCATACTTCCCATTTTTTTACCATACTCCACCGCCGGGCTCTTCCGCCGCCGTCCCCCGTTTGACGAATTCCTTGCCTTGCTCTGTTCTTACCGTTGCCCTGTTTTCCTTTTTACTTGCTTTGTTTTAAATGCAAATAACAGCAGACAGAAACTTGCAATAATGGCGGATTTTGCAGATCTGGGAAATTGATGGAGCTAAATGAGAAAGAGAAATTGAGAAAAAAGAAAAAGGGTTTCGATCTTCGAAGAAGACGATGAGAAATTCACTTCAAGAATTTGCATTCTGTTGGGGTAAAGAAATTTTCTTTCTCATCCGGAAATTTCCTCTGAATCTCTTTCTTTTTACTTGACTCCATTGTTATTAGATTGATTTGTAATCTGCTGATTATATATAAATTGTATGTGTTTTTACTTGTATTCTTAACTCAATTCCTCAAAAAGCAAATCTGTATGTATCGAATATCTTCTTTATGTTTGTCATTTCAATTATATTTTTAAAGAACTGAATAACAGTGTTGGGACAGTGATTTTTTTATGTTCTTGATTTGTTCATCAATGGCGGATATGGGTCTAATCATTTTAGTTTGTAATTGTTGAAATTAA

Coding sequence (CDS)

ATGGAAACTCCCATTCCTCTCCAATTTCTCATCTCTCTCACCGCGCTTCTCCTCCTTTTTCCCTCCGGAATTTCATCTCTTCCGGTCTTCCACCCCCGCTCCTCCGCCGGTGCTAAGTACCAAATTGAATGCACAATGTGCTCTGCTTGTGACAATCCTTGCGCTCAGTATCTATCTCCCCCACCTCCTCCACCGTCTCCTCCTCCCCCCGTCAACTGTCCGCCCCCGCCTTCTCCTCCCAGCTCCGGCACCTACGACTACTACTCTCCCCCCCCACCAGCTCAACCCTCTTACACATACTCCTCCCCGCCGCCGCCGGGTGGAATCATCGGACCCGGGGGGTACTACCAGCCCCCGCCGTATAGTAATTACCCAGCTCCCCCGCCTCCCAATCCCATTGTCCCATACTTCCCATTTTTTTACCATACTCCACCGCCGGGCTCTTCCGCCGCCGTCCCCCGTTTGACGAATTCCTTGCCTTGCTCTGTTCTTACCGTTGCCCTGTTTTCCTTTTTACTTGCTTTGTTTTAA

Protein sequence

METPIPLQFLISLTALLLLFPSGISSLPVFHPRSSAGAKYQIECTMCSACDNPCAQYLSPPPPPPSPPPPVNCPPPPSPPSSGTYDYYSPPPPAQPSYTYSSPPPPGGIIGPGGYYQPPPYSNYPAPPPPNPIVPYFPFFYHTPPPGSSAAVPRLTNSLPCSVLTVALFSFLLALF*

Homology

[Close]

BLAST of CSPI03G14790 vs. ExPASy Swiss-Prot
Match: Q9LUI1 (Leucine-rich repeat extensin-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=LRX6 PE=2 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 9.5e-07
Identity = 55/126 (43.65%), Postives = 61/126 (48.41%), Query Frame = 0


Query: 43  ECTMCSACDNPCAQY----LSPPPPPPSPPPPVNCPPPPSPPSSGTYDYYSPPPPAQPSY 102
           EC   S+    CA +     SPPPPPP PPPP   PPPP PP         PPPP  P Y
Sbjct: 358 ECKSFSSYPIDCASFGCSPPSPPPPPPPPPPPPPPPPPPPPP---------PPPPPPPPY 417

Query: 103 TYSSPPPPGGIIGPGGYYQPPPYSNYPAPPPPNPIVPYFPFFYHTPPPGSSAAVPRLTNS 162
            Y SPPPP     P  Y  PPP   Y  PPPP+P     P+ Y  PPP      P +  S
Sbjct: 418 VYPSPPPPPP--SPPPYVYPPPPPPYVYPPPPSP-----PYVYPPPPPSPQ---PYMYPS 464

Query: 163 LPCSVL 165
            PC+ L
Sbjct: 478 PPCNDL 464

[Close]

BLAST of CSPI03G14790 vs. ExPASy Swiss-Prot
Match: Q9T0K5 (Leucine-rich repeat extensin-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=LRX3 PE=1 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 4.7e-06
Identity = 52/120 (43.33%), Postives = 57/120 (47.50%), Query Frame = 0


Query: 53  PCAQYLSPP----PPPPSPPPPVNCPPPPSPPSSGTYDYYSPPPPAQPSYTYSSPPPPGG 112
           P   + +PP    PPPPSPPPPV  PPPP PP    Y    PPPP  P   YS PPPP  
Sbjct: 413 PAPIFSTPPTLTSPPPPSPPPPVYSPPPPPPPPPPVYSPPPPPPPPPPPPVYSPPPPPPP 472

Query: 113 IIGPGGYYQPPPYSNYPAP-----PPPNPIVPYFPFFYHTPPPGSSAAVPRLTNSLPCSV 164
              P   Y PPP S  P P     PPP P  P  P  Y  PPP   ++ P   +  P  V
Sbjct: 473 PPPPPPVYSPPPPSPPPPPPPVYSPPPPPPPPPPPPVYSPPPPPVYSSPPPPPSPAPTPV 532

[Close]

BLAST of CSPI03G14790 vs. ExPASy Swiss-Prot
Match: O65375 (Leucine-rich repeat extensin-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=LRX1 PE=1 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 3.4e-04
Identity = 54/117 (46.15%), Postives = 58/117 (49.57%), Query Frame = 0


Query: 57  YLSPPPPPPSPPPP--VNCPPPP---SPPSSGTYDYYSPPPPAQPSYTYSSPPPPGGIIG 116
           Y  PPPP PSPPPP   + PPPP   S P    Y Y SPPP   P Y YSSPPPP     
Sbjct: 456 YPPPPPPSPSPPPPYVYSSPPPPYVYSSPPPPPYVYSSPPP---PPYVYSSPPPPYVYSS 515

Query: 117 PGG---YYQPPPYSNYPAPP-----PPNPIVPYFPFFYHTPPPGSSAAVPRLTNSLP 161
           P     Y  PPP    P PP     PP P+V Y P    +PPP S    P +T S P
Sbjct: 516 PPPPYVYSSPPPPPPSPPPPCPESSPPPPVVYYAP-VTQSPPPPSPVYYPPVTQSPP 568

[Close]

BLAST of CSPI03G14790 vs. ExPASy TrEMBL
Match: A0A0A0LAN7 (Nutrient reservoir OS=Cucumis sativus OX=3659 GN=Csa_3G165630 PE=4 SV=1)

HSP 1 Score: 342.0 bits (876), Expect = 1.4e-90
Identity = 176/176 (100.00%), Postives = 176/176 (100.00%), Query Frame = 0


Query: 1   METPIPLQFLISLTALLLLFPSGISSLPVFHPRSSAGAKYQIECTMCSACDNPCAQYLSP 60
           METPIPLQFLISLTALLLLFPSGISSLPVFHPRSSAGAKYQIECTMCSACDNPCAQYLSP
Sbjct: 1   METPIPLQFLISLTALLLLFPSGISSLPVFHPRSSAGAKYQIECTMCSACDNPCAQYLSP 60

Query: 61  PPPPPSPPPPVNCPPPPSPPSSGTYDYYSPPPPAQPSYTYSSPPPPGGIIGPGGYYQPPP 120
           PPPPPSPPPPVNCPPPPSPPSSGTYDYYSPPPPAQPSYTYSSPPPPGGIIGPGGYYQPPP
Sbjct: 61  PPPPPSPPPPVNCPPPPSPPSSGTYDYYSPPPPAQPSYTYSSPPPPGGIIGPGGYYQPPP 120

Query: 121 YSNYPAPPPPNPIVPYFPFFYHTPPPGSSAAVPRLTNSLPCSVLTVALFSFLLALF 177
           YSNYPAPPPPNPIVPYFPFFYHTPPPGSSAAVPRLTNSLPCSVLTVALFSFLLALF
Sbjct: 121 YSNYPAPPPPNPIVPYFPFFYHTPPPGSSAAVPRLTNSLPCSVLTVALFSFLLALF 176

[Close]

BLAST of CSPI03G14790 vs. ExPASy TrEMBL
Match: A0A5A7U5R9 (Nutrient reservoir OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold171G007810 PE=4 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 3.7e-78
Identity = 159/177 (89.83%), Postives = 163/177 (92.09%), Query Frame = 0


Query: 1   METPIPLQFLISLTALLLLFPSGISSLPVFHPRSSAGAKYQIECTMCSACDNPCAQYLSP 60
           ME PI LQ LISLT LLLL     SSLPVFHPRSSAGAKYQIECTMCSACDNPC QYLSP
Sbjct: 1   MEAPISLQILISLTPLLLLLLPRTSSLPVFHPRSSAGAKYQIECTMCSACDNPCGQYLSP 60

Query: 61  PPPPPSPPPPVNCPPPPSPPSSGTYDYYS-PPPPAQPSYTYSSPPPPGGIIGPGGYYQPP 120
           PPPPPSPPPPVNCPPPPSPP+SGTYDYYS PPPPAQP+YTYSSPPPP GIIGPGGYYQPP
Sbjct: 61  PPPPPSPPPPVNCPPPPSPPTSGTYDYYSPPPPPAQPTYTYSSPPPPRGIIGPGGYYQPP 120

Query: 121 PYSNYPAPPPPNPIVPYFPFFYHTPPPGSSAAVPRLTNSLPCSVLTVALFSFLLALF 177
           PY+NYPAPPPPNPIVPYFPF+YHTPPPGSSAAV RLTNSLPCSVLTVALFSFLL LF
Sbjct: 121 PYNNYPAPPPPNPIVPYFPFYYHTPPPGSSAAVGRLTNSLPCSVLTVALFSFLLVLF 177

[Close]

BLAST of CSPI03G14790 vs. ExPASy TrEMBL
Match: A0A6J1GVF6 (leucine-rich repeat extensin-like protein 6 OS=Cucurbita moschata OX=3662 GN=LOC111457543 PE=4 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 1.5e-66
Identity = 141/176 (80.11%), Postives = 151/176 (85.80%), Query Frame = 0


Query: 1   METPIPLQFLISLTALLLLFPSGISSLPVFHPRSSAGAKYQIECTMCSACDNPCAQYLSP 60
           MET I L+F ISLTA+LL FP+G SSLP    R+ AGAKYQIECTMCSACDNPC QYLSP
Sbjct: 1   METAISLKFFISLTAVLLSFPAGFSSLPTADRRTLAGAKYQIECTMCSACDNPCGQYLSP 60

Query: 61  PPPPPSPPPPVNCPPPPSPPSSGTYDYYSPPPPAQPSYTYSSPPPPGGIIGPGGYYQPPP 120
           PPPPPSPPP +NCPPPPSPPSSGTY Y  PPPP+QP+YTYSSPPPP G  GP GYYQPPP
Sbjct: 61  PPPPPSPPPSINCPPPPSPPSSGTYYYSPPPPPSQPTYTYSSPPPPPGNYGPSGYYQPPP 120

Query: 121 YSNYPAPPPPNPIVPYFPFFYHTPPPGSSAAVPRLTNSLPCSVLTVALFSFLLALF 177
           YSNYPAPPPPNPIVPYFPF++HTPPPGS+AA  RLTNS  CSVLTV LF FLLALF
Sbjct: 121 YSNYPAPPPPNPIVPYFPFYFHTPPPGSAAA-GRLTNSWACSVLTVPLFLFLLALF 175

[Close]

BLAST of CSPI03G14790 vs. ExPASy TrEMBL
Match: A0A6J1IXZ9 (leucine-rich repeat extensin-like protein 6 OS=Cucurbita maxima OX=3661 GN=LOC111479480 PE=4 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 4.7e-65
Identity = 139/176 (78.98%), Postives = 150/176 (85.23%), Query Frame = 0


Query: 1   METPIPLQFLISLTALLLLFPSGISSLPVFHPRSSAGAKYQIECTMCSACDNPCAQYLSP 60
           MET I L+F ISLTA+LL F +G SSLP    R+ AGAKYQIECTMCSACDNPC QYLSP
Sbjct: 1   METAISLKFFISLTAVLLSFTAGFSSLPTADRRTLAGAKYQIECTMCSACDNPCGQYLSP 60

Query: 61  PPPPPSPPPPVNCPPPPSPPSSGTYDYYSPPPPAQPSYTYSSPPPPGGIIGPGGYYQPPP 120
           PPPPPSPPP ++CPPPPSPPSSGTY Y  PPPP+QP+YTYSSPPPP G  GP GYYQPPP
Sbjct: 61  PPPPPSPPPSIDCPPPPSPPSSGTYYYSPPPPPSQPTYTYSSPPPPPGNYGPSGYYQPPP 120

Query: 121 YSNYPAPPPPNPIVPYFPFFYHTPPPGSSAAVPRLTNSLPCSVLTVALFSFLLALF 177
           YSNYPAPPPPNPIVPYFPF++HTPPPGS+AA  RLTNS  CSVLTV LF FLLALF
Sbjct: 121 YSNYPAPPPPNPIVPYFPFYFHTPPPGSAAA-GRLTNSWACSVLTVPLFFFLLALF 175

[Close]

BLAST of CSPI03G14790 vs. ExPASy TrEMBL
Match: A0A6J1C7N8 (leucine-rich repeat extensin-like protein 3 OS=Momordica charantia OX=3673 GN=LOC111009142 PE=4 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 6.8e-64
Identity = 139/179 (77.65%), Postives = 150/179 (83.80%), Query Frame = 0


Query: 1   METPIPLQFLISLTALLLLFPSGISSLPVFHPRSSAGA---KYQIECTMCSACDNPCAQY 60
           ME   PL+FL+ L A+LL+FP+ + SLP    R+SAGA   KYQIECTMCSACDNPC QY
Sbjct: 1   MENGAPLRFLLPLAAVLLIFPATLWSLPATDRRTSAGAVSSKYQIECTMCSACDNPCGQY 60

Query: 61  LSPPPPPPSPPPPVNCPPPPSPPSSGTYDYYSPPPPAQPSYTYSSPPPPGGIIGPGGYYQ 120
           LSPPPPPPSPPPPVNCPPPPSPPSSGTY YYSPPPPAQP+YTYSSPPPP GII  GGYYQ
Sbjct: 61  LSPPPPPPSPPPPVNCPPPPSPPSSGTYYYYSPPPPAQPTYTYSSPPPPRGII--GGYYQ 120

Query: 121 PPPYSNYPAPPPPNPIVPYFPFFYHTPPPGSSAAVPRLTNSLPCSVLTVALFSFLLALF 177
           PPPYSNYPAPPPPNPIVPYFPF+YHTPPPGSSAA   LT +  CSV T  LF+ LLALF
Sbjct: 121 PPPYSNYPAPPPPNPIVPYFPFYYHTPPPGSSAAA-HLTATSACSVFTATLFTLLLALF 176

[Close]

BLAST of CSPI03G14790 vs. NCBI nr
Match: KGN57146.1 (hypothetical protein Csa_010613 [Cucumis sativus])

HSP 1 Score: 342.0 bits (876), Expect = 3.0e-90
Identity = 176/176 (100.00%), Postives = 176/176 (100.00%), Query Frame = 0


Query: 1   METPIPLQFLISLTALLLLFPSGISSLPVFHPRSSAGAKYQIECTMCSACDNPCAQYLSP 60
           METPIPLQFLISLTALLLLFPSGISSLPVFHPRSSAGAKYQIECTMCSACDNPCAQYLSP
Sbjct: 1   METPIPLQFLISLTALLLLFPSGISSLPVFHPRSSAGAKYQIECTMCSACDNPCAQYLSP 60

Query: 61  PPPPPSPPPPVNCPPPPSPPSSGTYDYYSPPPPAQPSYTYSSPPPPGGIIGPGGYYQPPP 120
           PPPPPSPPPPVNCPPPPSPPSSGTYDYYSPPPPAQPSYTYSSPPPPGGIIGPGGYYQPPP
Sbjct: 61  PPPPPSPPPPVNCPPPPSPPSSGTYDYYSPPPPAQPSYTYSSPPPPGGIIGPGGYYQPPP 120

Query: 121 YSNYPAPPPPNPIVPYFPFFYHTPPPGSSAAVPRLTNSLPCSVLTVALFSFLLALF 177
           YSNYPAPPPPNPIVPYFPFFYHTPPPGSSAAVPRLTNSLPCSVLTVALFSFLLALF
Sbjct: 121 YSNYPAPPPPNPIVPYFPFFYHTPPPGSSAAVPRLTNSLPCSVLTVALFSFLLALF 176

[Close]

BLAST of CSPI03G14790 vs. NCBI nr
Match: KAA0049526.1 (Nutrient reservoir [Cucumis melo var. makuwa])

HSP 1 Score: 300.8 bits (769), Expect = 7.6e-78
Identity = 159/177 (89.83%), Postives = 163/177 (92.09%), Query Frame = 0


Query: 1   METPIPLQFLISLTALLLLFPSGISSLPVFHPRSSAGAKYQIECTMCSACDNPCAQYLSP 60
           ME PI LQ LISLT LLLL     SSLPVFHPRSSAGAKYQIECTMCSACDNPC QYLSP
Sbjct: 1   MEAPISLQILISLTPLLLLLLPRTSSLPVFHPRSSAGAKYQIECTMCSACDNPCGQYLSP 60

Query: 61  PPPPPSPPPPVNCPPPPSPPSSGTYDYYS-PPPPAQPSYTYSSPPPPGGIIGPGGYYQPP 120
           PPPPPSPPPPVNCPPPPSPP+SGTYDYYS PPPPAQP+YTYSSPPPP GIIGPGGYYQPP
Sbjct: 61  PPPPPSPPPPVNCPPPPSPPTSGTYDYYSPPPPPAQPTYTYSSPPPPRGIIGPGGYYQPP 120

Query: 121 PYSNYPAPPPPNPIVPYFPFFYHTPPPGSSAAVPRLTNSLPCSVLTVALFSFLLALF 177
           PY+NYPAPPPPNPIVPYFPF+YHTPPPGSSAAV RLTNSLPCSVLTVALFSFLL LF
Sbjct: 121 PYNNYPAPPPPNPIVPYFPFYYHTPPPGSSAAVGRLTNSLPCSVLTVALFSFLLVLF 177

[Close]

BLAST of CSPI03G14790 vs. NCBI nr
Match: XP_038906774.1 (leucine-rich repeat extensin-like protein 6 [Benincasa hispida])

HSP 1 Score: 267.7 bits (683), Expect = 7.1e-68
Identity = 147/176 (83.52%), Postives = 153/176 (86.93%), Query Frame = 0


Query: 1   METPIPLQFLISLTALLLLFPSGISSLPVFHPRSSAGAKYQIECTMCSACDNPCAQYLSP 60
           MET I L+F ISLTA+LLLFP+G SSLPV   R SAGAKYQIECTMCSACDNPC QYLSP
Sbjct: 1   METAISLRFFISLTAVLLLFPAGFSSLPVADRRISAGAKYQIECTMCSACDNPCGQYLSP 60

Query: 61  PPPPPSPPPPVNCPPPPSPPSSGTYDYYSPPPPAQPSYTYSSPPPPGGIIGPGGYYQPPP 120
           PP    PPPPVNCPPPPSPPSSGTY YYSPPPP QP+YTYSSPPPP GI G GGYYQPPP
Sbjct: 61  PP----PPPPVNCPPPPSPPSSGTYYYYSPPPPTQPTYTYSSPPPPRGING-GGYYQPPP 120

Query: 121 YSNYPAPPPPNPIVPYFPFFYHTPPPGSSAAVPRLTNSLPCSVLTVALFSFLLALF 177
           Y+NYPAPPPPNPIVPYFPF+YHTPPPGSSAAV  LTNSL  SVLTVALFSFLL LF
Sbjct: 121 YNNYPAPPPPNPIVPYFPFYYHTPPPGSSAAVGCLTNSLAYSVLTVALFSFLLTLF 171

[Close]

BLAST of CSPI03G14790 vs. NCBI nr
Match: XP_022955565.1 (leucine-rich repeat extensin-like protein 6 [Cucurbita moschata])

HSP 1 Score: 262.3 bits (669), Expect = 3.0e-66
Identity = 141/176 (80.11%), Postives = 151/176 (85.80%), Query Frame = 0


Query: 1   METPIPLQFLISLTALLLLFPSGISSLPVFHPRSSAGAKYQIECTMCSACDNPCAQYLSP 60
           MET I L+F ISLTA+LL FP+G SSLP    R+ AGAKYQIECTMCSACDNPC QYLSP
Sbjct: 1   METAISLKFFISLTAVLLSFPAGFSSLPTADRRTLAGAKYQIECTMCSACDNPCGQYLSP 60

Query: 61  PPPPPSPPPPVNCPPPPSPPSSGTYDYYSPPPPAQPSYTYSSPPPPGGIIGPGGYYQPPP 120
           PPPPPSPPP +NCPPPPSPPSSGTY Y  PPPP+QP+YTYSSPPPP G  GP GYYQPPP
Sbjct: 61  PPPPPSPPPSINCPPPPSPPSSGTYYYSPPPPPSQPTYTYSSPPPPPGNYGPSGYYQPPP 120

Query: 121 YSNYPAPPPPNPIVPYFPFFYHTPPPGSSAAVPRLTNSLPCSVLTVALFSFLLALF 177
           YSNYPAPPPPNPIVPYFPF++HTPPPGS+AA  RLTNS  CSVLTV LF FLLALF
Sbjct: 121 YSNYPAPPPPNPIVPYFPFYFHTPPPGSAAA-GRLTNSWACSVLTVPLFLFLLALF 175

[Close]

BLAST of CSPI03G14790 vs. NCBI nr
Match: KAG6582188.1 (hypothetical protein SDJN03_22190, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 258.8 bits (660), Expect = 3.3e-65
Identity = 139/176 (78.98%), Postives = 150/176 (85.23%), Query Frame = 0


Query: 1   METPIPLQFLISLTALLLLFPSGISSLPVFHPRSSAGAKYQIECTMCSACDNPCAQYLSP 60
           MET I L+F +SLTA+LL FP+G SSL     R+ AGAKYQIECTMCSACDNPC QYLSP
Sbjct: 1   METAISLKFFVSLTAVLLSFPAGFSSLQTADRRTLAGAKYQIECTMCSACDNPCGQYLSP 60

Query: 61  PPPPPSPPPPVNCPPPPSPPSSGTYDYYSPPPPAQPSYTYSSPPPPGGIIGPGGYYQPPP 120
           PPPPPSPPP +NCPPPPSPPSSGTY Y  PPPP+QP+YTYSSPPPP G  GP GYYQPPP
Sbjct: 61  PPPPPSPPPAINCPPPPSPPSSGTYYYSPPPPPSQPTYTYSSPPPPPGNYGPSGYYQPPP 120

Query: 121 YSNYPAPPPPNPIVPYFPFFYHTPPPGSSAAVPRLTNSLPCSVLTVALFSFLLALF 177
           YSNYPAPPPPNPIVPYFPF++HTPPPGS+AA  RLTNS  CSVLTV LF FLLALF
Sbjct: 121 YSNYPAPPPPNPIVPYFPFYFHTPPPGSAAA-GRLTNSWACSVLTVPLFLFLLALF 175

[Close]

BLAST of CSPI03G14790 vs. TAIR 10
Match: AT5G49280.1 (hydroxyproline-rich glycoprotein family protein )

HSP 1 Score: 115.9 bits (289), Expect = 3.2e-26
Identity = 81/139 (58.27%), Postives = 90/139 (64.75%), Query Frame = 0


Query: 42  IECTMCSACDNPCAQYLSPPPPPPSPPPP----VNCPPPPSPPSSGTYDYYSPPPPAQPS 101
           + CTMCS+CDNPC+   S  PPPPSPPPP      CPPPPSPPSSG    Y  PPP+Q  
Sbjct: 31  VSCTMCSSCDNPCSPVQS-SPPPPSPPPPSTPTTACPPPPSPPSSGGGSSYYYPPPSQSG 90

Query: 102 YTYSSPPPPGGIIGPGGYYQPPPYS-NYPAPPPPNPIVPYFPFFYHTPPPGSSAAVPRLT 161
                PPP GG  G  GYY PPPYS NYP PPPPNPIVPYFPF+YHTPPPGS +   R  
Sbjct: 91  GGSKYPPPYGG--GGQGYYYPPPYSGNYPTPPPPNPIVPYFPFYYHTPPPGSGS--DRFM 150

Query: 162 NSLPCSVLTVALFSFLLAL 176
           +S     +  ALF+  L L
Sbjct: 151 SSYS---IIFALFAVFLCL 161

[Close]

BLAST of CSPI03G14790 vs. TAIR 10
Match: AT3G06750.1 (hydroxyproline-rich glycoprotein family protein )

HSP 1 Score: 96.3 bits (238), Expect = 2.7e-20
Identity = 76/147 (51.70%), Postives = 87/147 (59.18%), Query Frame = 0


Query: 22  SGISSLPVFHPRSSAGAKYQIECTMCSACDNPCAQYLSPPPPPPSPPPPVNCPPPPSPPS 81
           SG+  L +  P         + CTMCS+CDNPC    +P P   SPPP    PPP S   
Sbjct: 10  SGLLILLMSLPLLVTSKDETVSCTMCSSCDNPC----NPVPSSYSPPP----PPPSSSGG 69

Query: 82  SGTYDYYSPPPPAQPSYTYSSPPPPGGIIGPGGYYQPPPYSNYPAPPPPNPIVPYFPFFY 141
            G+Y YYSPPPP+  S     PPP GG  G GGYY PP Y NY  PPPPNPIVPYFPF+Y
Sbjct: 70  GGSY-YYSPPPPSS-SGGVKYPPPYGG-DGYGGYYPPPYYGNYGTPPPPNPIVPYFPFYY 129

Query: 142 HTPPPGSSAAVPRLTNSLPCSVLTVAL 169
           HTPP G S +  RL NSL  ++  V L
Sbjct: 130 HTPPQGYSGSA-RLQNSLLFALFAVLL 144

[Close]

BLAST of CSPI03G14790 vs. TAIR 10
Match: AT4G16140.1 (proline-rich family protein )

HSP 1 Score: 95.1 bits (235), Expect = 5.9e-20
Identity = 70/142 (49.30%), Postives = 79/142 (55.63%), Query Frame = 0


Query: 43  ECTMCSACDNPCAQYLSPPPPP--PSPPPP----VNCPPPPSPPSSGTYDYYSPPPPAQP 102
           +CTMC++CDNPC    SPPPPP  PSPPPP      CPPPPS    G Y YY   PPA  
Sbjct: 30  DCTMCTSCDNPCQPNPSPPPPPSNPSPPPPSPTTTACPPPPSSSGGGPYYYY---PPASQ 89

Query: 103 SYTYSSPPPPGGIIGPGGYYQPPPYS--NYPAPPPPNPIVPYFPFFYHTPPPGSSAAVPR 162
           S +Y  PP        GGYY PPP S  NYP  PPPNPIVPYFPF+Y+ PPP S  +   
Sbjct: 90  SGSYRPPPSSSS----GGYYYPPPKSGGNYPYTPPPNPIVPYFPFYYYNPPPQSVMSGSD 149

Query: 163 LTNSLPCSVLTVALFSFLLALF 177
                   V  + +FS     F
Sbjct: 150 AKIRFSYGVSFILIFSLYFGCF 164

[Close]

BLAST of CSPI03G14790 vs. TAIR 10
Match: AT3G22800.1 (Leucine-rich repeat (LRR) family protein )

HSP 1 Score: 55.1 bits (131), Expect = 6.8e-08
Identity = 55/126 (43.65%), Postives = 61/126 (48.41%), Query Frame = 0


Query: 43  ECTMCSACDNPCAQY----LSPPPPPPSPPPPVNCPPPPSPPSSGTYDYYSPPPPAQPSY 102
           EC   S+    CA +     SPPPPPP PPPP   PPPP PP         PPPP  P Y
Sbjct: 358 ECKSFSSYPIDCASFGCSPPSPPPPPPPPPPPPPPPPPPPPP---------PPPPPPPPY 417

Query: 103 TYSSPPPPGGIIGPGGYYQPPPYSNYPAPPPPNPIVPYFPFFYHTPPPGSSAAVPRLTNS 162
            Y SPPPP     P  Y  PPP   Y  PPPP+P     P+ Y  PPP      P +  S
Sbjct: 418 VYPSPPPPPP--SPPPYVYPPPPPPYVYPPPPSP-----PYVYPPPPPSPQ---PYMYPS 464

Query: 163 LPCSVL 165
            PC+ L
Sbjct: 478 PPCNDL 464

[Close]

BLAST of CSPI03G14790 vs. TAIR 10
Match: AT4G13340.1 (Leucine-rich repeat (LRR) family protein )

HSP 1 Score: 52.8 bits (125), Expect = 3.4e-07
Identity = 52/120 (43.33%), Postives = 57/120 (47.50%), Query Frame = 0


Query: 53  PCAQYLSPP----PPPPSPPPPVNCPPPPSPPSSGTYDYYSPPPPAQPSYTYSSPPPPGG 112
           P   + +PP    PPPPSPPPPV  PPPP PP    Y    PPPP  P   YS PPPP  
Sbjct: 413 PAPIFSTPPTLTSPPPPSPPPPVYSPPPPPPPPPPVYSPPPPPPPPPPPPVYSPPPPPPP 472

Query: 113 IIGPGGYYQPPPYSNYPAP-----PPPNPIVPYFPFFYHTPPPGSSAAVPRLTNSLPCSV 164
              P   Y PPP S  P P     PPP P  P  P  Y  PPP   ++ P   +  P  V
Sbjct: 473 PPPPPPVYSPPPPSPPPPPPPVYSPPPPPPPPPPPPVYSPPPPPVYSSPPPPPSPAPTPV 532

The following BLAST results are available for this feature:

BLAST of CSPI03G14790 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LUI1	9.5e-07	43.65	Leucine-rich repeat extensin-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=L...	[more]
Q9T0K5	4.7e-06	43.33	Leucine-rich repeat extensin-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=L...	[more]
O65375	3.4e-04	46.15	Leucine-rich repeat extensin-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=L...	[more]

BLAST of CSPI03G14790 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LAN7	1.4e-90	100.00	Nutrient reservoir OS=Cucumis sativus OX=3659 GN=Csa_3G165630 PE=4 SV=1	[more]
A0A5A7U5R9	3.7e-78	89.83	Nutrient reservoir OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold171G0...	[more]
A0A6J1GVF6	1.5e-66	80.11	leucine-rich repeat extensin-like protein 6 OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1IXZ9	4.7e-65	78.98	leucine-rich repeat extensin-like protein 6 OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1C7N8	6.8e-64	77.65	leucine-rich repeat extensin-like protein 3 OS=Momordica charantia OX=3673 GN=LO...	[more]

BLAST of CSPI03G14790 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN57146.1	3.0e-90	100.00	hypothetical protein Csa_010613 [Cucumis sativus]	[more]
KAA0049526.1	7.6e-78	89.83	Nutrient reservoir [Cucumis melo var. makuwa]	[more]
XP_038906774.1	7.1e-68	83.52	leucine-rich repeat extensin-like protein 6 [Benincasa hispida]	[more]
XP_022955565.1	3.0e-66	80.11	leucine-rich repeat extensin-like protein 6 [Cucurbita moschata]	[more]
KAG6582188.1	3.3e-65	78.98	hypothetical protein SDJN03_22190, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of CSPI03G14790 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G49280.1	3.2e-26	58.27	hydroxyproline-rich glycoprotein family protein	[more]
AT3G06750.1	2.7e-20	51.70	hydroxyproline-rich glycoprotein family protein	[more]
AT4G16140.1	5.9e-20	49.30	proline-rich family protein	[more]
AT3G22800.1	6.8e-08	43.65	Leucine-rich repeat (LRR) family protein	[more]
AT4G13340.1	3.4e-07	43.33	Leucine-rich repeat (LRR) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR01217	PRICHEXTENSN	coord: 65..86 score: 34.55 coord: 53..65 score: 36.92 coord: 89..105 score: 44.71 coord: 115..132 score: 41.11
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 65..106
None	No IPR available	PANTHER	PTHR37702:SF8	RESERVOIR, PUTATIVE-RELATED	coord: 15..172
None	No IPR available	PANTHER	PTHR37702	PROLINE-RICH FAMILY PROTEIN	coord: 15..172

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G14790.1	CSPI03G14790.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane