CSPI03G14260 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI03G14260
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Transcription termination factor MTEF1
Location	Chr3: 10707015 .. 10708401 (-)
RNA-Seq Expression	CSPI03G14260
Synteny	CSPI03G14260

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATAAAGCTATTTTCGACGATTTCCCATCAAAATCCCTAACCTCCGCGCGCCGCCGCCCCTTTCTCTTCTCTCTTCTCTCATTCTTCTTCTCAACAAGGTACCAACACCTCACTCTTCCTTCTCCTCCCACTTCTTGCACTCATGTCTAACTTCTTTCGCAGACTCCTTCTTCTTAGATCTCCATCCTCAGTCTCTTCTCACGGATTTTCCGCAACATGCCTATCCACCTCTTCTGAGATTGTATCATCTCCGAAATCTGCTTCGTTGCCTTCTAATGCTGTTCAGCTCAATAATAAAGGGAAGGCTGTAATTGATTTACTTGCGAATCATGGATTCTCTGAATCACAAATCTCTTACCTTGCCAACAGGTATCCTCCAATTCTTTCTTCTAACCCCGAGAAAACCCTGTTGCCCAAATTGTTGTTTTTTCAATCTAAAGCTCATTCTTCCTCAGAGATTTTCGAAATATTACGTTCCGATCCTTGGGTTTTATCAAAAAGTTTAAACGAACGAATTATTCCAGCCTTTAATTACCTTCAAGCCGTGCTTGGAAGTGAGGAGAAGACTCTGGCTACCATAAAACATTCTGTGAGTATTCTCTCTAAGGATCTTCGAATTTGTCTTGGTCCCAATATTGAAATTCTGAAACAAATTGGAGTGCCGGATTCAAATATTTTAAAATATCTTCAGTACCAGCCTAGAGTGTTCTTGACAAATTCCATCCAATTCAAGGAGACTGTAGAGAGAGTTAAGGAAATTGGATTCAACACTCAACAATTGCATTTTGTTGATGCTGTTTTTTGTCTGCGATCAATGACCAAATCTACATGGGATAAGAAGGTTGAAGTTTATAGGAAATGGGGATTATCTGAAGAAGAGATCCGTGTAGCTTTTAGAAAGCATCCACGGTGTATGACATTTTCTGTGGATAAGATTAATAATGCAATGGATTTTCTTGTCAATAAAATGGAATACGAATCATCTTTCCTTGCTGAAAGACCAATTTTACTTCAACTTAGTTTGAAGAAGAGGCTTTTGCCTAGAGGCCATGTTTATGAAGTTTTGCTGTCAAAGGGTTTGATTAAAAAGCACCAGAATCTTCCTTTCATGTTGAAGTCTCCTGAAAAGCATTTCATAGAAAAAATCATCAACCCTCATAAGGAGCAGATTCCTGGATTGTTGGAGTTGTATGAGAAGAAGTTAATAGATTCTAGTAGATGAACAGGTTCGATCTCCTTGAAATTTTAATAACTAAACTGTCTTGTTAGTTGATATGTGTAGTAGATTGAGTTGGTATCCCTATTTTTGTCCATTCTTGGTTTGCATCTCCTTTACGGCTTCTGCATTCGTATTGTGTTAACGTAAATATAATTTTTTTGAGATCAC

mRNA sequence

TATAAAGCTATTTTCGACGATTTCCCATCAAAATCCCTAACCTCCGCGCGCCGCCGCCCCTTTCTCTTCTCTCTTCTCTCATTCTTCTTCTCAACAAGGTACCAACACCTCACTCTTCCTTCTCCTCCCACTTCTTGCACTCATGTCTAACTTCTTTCGCAGACTCCTTCTTCTTAGATCTCCATCCTCAGTCTCTTCTCACGGATTTTCCGCAACATGCCTATCCACCTCTTCTGAGATTGTATCATCTCCGAAATCTGCTTCGTTGCCTTCTAATGCTGTTCAGCTCAATAATAAAGGGAAGGCTGTAATTGATTTACTTGCGAATCATGGATTCTCTGAATCACAAATCTCTTACCTTGCCAACAGGTATCCTCCAATTCTTTCTTCTAACCCCGAGAAAACCCTGTTGCCCAAATTGTTGTTTTTTCAATCTAAAGCTCATTCTTCCTCAGAGATTTTCGAAATATTACGTTCCGATCCTTGGGTTTTATCAAAAAGTTTAAACGAACGAATTATTCCAGCCTTTAATTACCTTCAAGCCGTGCTTGGAAGTGAGGAGAAGACTCTGGCTACCATAAAACATTCTGTGAGTATTCTCTCTAAGGATCTTCGAATTTGTCTTGGTCCCAATATTGAAATTCTGAAACAAATTGGAGTGCCGGATTCAAATATTTTAAAATATCTTCAGTACCAGCCTAGAGTGTTCTTGACAAATTCCATCCAATTCAAGGAGACTGTAGAGAGAGTTAAGGAAATTGGATTCAACACTCAACAATTGCATTTTGTTGATGCTGTTTTTTGTCTGCGATCAATGACCAAATCTACATGGGATAAGAAGGTTGAAGTTTATAGGAAATGGGGATTATCTGAAGAAGAGATCCGTGTAGCTTTTAGAAAGCATCCACGGTGTATGACATTTTCTGTGGATAAGATTAATAATGCAATGGATTTTCTTGTCAATAAAATGGAATACGAATCATCTTTCCTTGCTGAAAGACCAATTTTACTTCAACTTAGTTTGAAGAAGAGGCTTTTGCCTAGAGGCCATGTTTATGAAGTTTTGCTGTCAAAGGGTTTGATTAAAAAGCACCAGAATCTTCCTTTCATGTTGAAGTCTCCTGAAAAGCATTTCATAGAAAAAATCATCAACCCTCATAAGGAGCAGATTCCTGGATTGTTGGAGTTGTATGAGAAGAAGTTAATAGATTCTAGTAGATGAACAGGTTCGATCTCCTTGAAATTTTAATAACTAAACTGTCTTGTTAGTTGATATGTGTAGTAGATTGAGTTGGTATCCCTATTTTTGTCCATTCTTGGTTTGCATCTCCTTTACGGCTTCTGCATTCGTATTGTGTTAACGTAAATATAATTTTTTTGAGATCAC

Coding sequence (CDS)

ATGTCTAACTTCTTTCGCAGACTCCTTCTTCTTAGATCTCCATCCTCAGTCTCTTCTCACGGATTTTCCGCAACATGCCTATCCACCTCTTCTGAGATTGTATCATCTCCGAAATCTGCTTCGTTGCCTTCTAATGCTGTTCAGCTCAATAATAAAGGGAAGGCTGTAATTGATTTACTTGCGAATCATGGATTCTCTGAATCACAAATCTCTTACCTTGCCAACAGGTATCCTCCAATTCTTTCTTCTAACCCCGAGAAAACCCTGTTGCCCAAATTGTTGTTTTTTCAATCTAAAGCTCATTCTTCCTCAGAGATTTTCGAAATATTACGTTCCGATCCTTGGGTTTTATCAAAAAGTTTAAACGAACGAATTATTCCAGCCTTTAATTACCTTCAAGCCGTGCTTGGAAGTGAGGAGAAGACTCTGGCTACCATAAAACATTCTGTGAGTATTCTCTCTAAGGATCTTCGAATTTGTCTTGGTCCCAATATTGAAATTCTGAAACAAATTGGAGTGCCGGATTCAAATATTTTAAAATATCTTCAGTACCAGCCTAGAGTGTTCTTGACAAATTCCATCCAATTCAAGGAGACTGTAGAGAGAGTTAAGGAAATTGGATTCAACACTCAACAATTGCATTTTGTTGATGCTGTTTTTTGTCTGCGATCAATGACCAAATCTACATGGGATAAGAAGGTTGAAGTTTATAGGAAATGGGGATTATCTGAAGAAGAGATCCGTGTAGCTTTTAGAAAGCATCCACGGTGTATGACATTTTCTGTGGATAAGATTAATAATGCAATGGATTTTCTTGTCAATAAAATGGAATACGAATCATCTTTCCTTGCTGAAAGACCAATTTTACTTCAACTTAGTTTGAAGAAGAGGCTTTTGCCTAGAGGCCATGTTTATGAAGTTTTGCTGTCAAAGGGTTTGATTAAAAAGCACCAGAATCTTCCTTTCATGTTGAAGTCTCCTGAAAAGCATTTCATAGAAAAAATCATCAACCCTCATAAGGAGCAGATTCCTGGATTGTTGGAGTTGTATGAGAAGAAGTTAATAGATTCTAGTAGATGA

Protein sequence

MSNFFRRLLLLRSPSSVSSHGFSATCLSTSSEIVSSPKSASLPSNAVQLNNKGKAVIDLLANHGFSESQISYLANRYPPILSSNPEKTLLPKLLFFQSKAHSSSEIFEILRSDPWVLSKSLNERIIPAFNYLQAVLGSEEKTLATIKHSVSILSKDLRICLGPNIEILKQIGVPDSNILKYLQYQPRVFLTNSIQFKETVERVKEIGFNTQQLHFVDAVFCLRSMTKSTWDKKVEVYRKWGLSEEEIRVAFRKHPRCMTFSVDKINNAMDFLVNKMEYESSFLAERPILLQLSLKKRLLPRGHVYEVLLSKGLIKKHQNLPFMLKSPEKHFIEKIINPHKEQIPGLLELYEKKLIDSSR*

Homology

[Close]

BLAST of CSPI03G14260 vs. ExPASy Swiss-Prot
Match: Q9FK23 (Transcription termination factor MTERF8, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF8 PE=1 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 4.9e-10
Identity = 55/239 (23.01%), Postives = 104/239 (43.51%), Query Frame = 0


Query: 76  RYPPILSSNPEKTLLPKLLFFQS-KAHSSSEIFEILRSDPWVLSKSLNERIIPAFNYLQA 135
           R P IL+S+ +  L+P++ F ++           +LR  P +LS S+ E +     +L++
Sbjct: 237 RRPVILNSDLDSQLIPRVDFIRNLSGEDDFATGTVLRRLPAILSYSV-EHMNGQVEFLKS 296

Query: 136 VLGSEEKTLATIKHSV-SILSKDLRICLGPNIEILKQIGVPDSNILKYLQYQPRVFLTNS 195
             G   + +  I H   +++S      L P IE LK+ G     + K+L   P +   + 
Sbjct: 297 FAGLTSEQVFKIVHVFPNVISTSKERKLRPRIEFLKECGFDSPGMFKFLSKAPLILALSE 356

Query: 196 IQFKETVERVKEIGFNTQQLHFVDAVFCLRSMTKSTWDKKVEVYRKWGLSEEEIRVAFRK 255
                 +  + +IG+  +      A+  +   +     + + +Y  +GLS E+I     K
Sbjct: 357 NNLSHKLGFLVKIGYKHRTKELAFAMGAVTRTSSDNMQRVIGLYLSYGLSFEDILAMSTK 416

Query: 256 HPRCMTFSVDKINNAMDFLVNKMEYESSFLAERPILLQLSLKKRLLPRGHVYEVLLSKG 313
           HP+ + ++   +   +++L+  M  E   L   P  L   L  R+  R    E L S+G
Sbjct: 417 HPQVLQYNYTSLEEKLEYLIEYMGREVEELLAFPAFLGYKLDSRIKHR--YEEKLKSRG 472

[Close]

BLAST of CSPI03G14260 vs. ExPASy Swiss-Prot
Match: Q9FM80 (Transcription termination factor MTERF9, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF9 PE=2 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 2.1e-05
Identity = 65/298 (21.81%), Postives = 128/298 (42.95%), Query Frame = 0


Query: 47  VQLNNKGKAVIDLLANHGFSESQISYLANRYPPILSSNPEKTLLPKLLFFQSKAHSSSEI 106
           + ++ K   ++D L+  G  ES    +  R+ P L  N   +   +L +  S      +I
Sbjct: 178 IDIDPKCVPLLDYLSTFGLKESHFVQMYERHMPSLQIN-VFSAQERLDYLLSVGVKHRDI 237

Query: 107 FEILRSDPWVLSKSLNERIIPAFNYLQAVLGSEEKTLATIKHSVSILSKDLRICLGPNIE 166
             +L   P +L  ++   +    ++L  +     K    +  + S+ S  +   L P I 
Sbjct: 238 KRMLLRQPQILQYTVENNLKAHISFLMGLGIPNSKIGQIVAATPSLFSYSVENSLRPTIR 297

Query: 167 -ILKQIGVPDSNILKYLQYQPRV--------------FLTNSIQF-KETVERVKEIGFNT 226
            +++++G+ ++++ K +Q  P++              FL+  +   +++V  VK +  + 
Sbjct: 298 YLIEEVGIKETDVGKVVQLSPQILVQRLDITWNTRYMFLSKELGAPRDSV--VKMVKKHP 357

Query: 227 QQLHF-VDAVFCLRSMTKSTWDKKVEVYRKWGLSEEEIRVAFRKHPRCMTFSV-DKINNA 286
           Q LH+ +D  F  R          +   R  G+   +I        + ++ S+ D +   
Sbjct: 358 QLLHYSIDDGFLPR----------INFLRSIGMCNSDILKVLTSLTQVLSLSLEDNLKPK 417

Query: 287 MDFLVNKMEYESSFLAERPILLQLSLKKRLLPRGHVYEVLLSKGLIKKHQNLPFMLKS 327
             +LVN++  E   L + P+ L LSL +R+ PR H + V L     KK +  PF L S
Sbjct: 418 YMYLVNELNNEVHILTKYPMYLSLSLDQRIRPR-HRFLVEL-----KKVRKGPFPLSS 456

[Close]

BLAST of CSPI03G14260 vs. ExPASy Swiss-Prot
Match: Q84X53 (Transcription termination factor MTEF1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF1 PE=2 SV=2)

HSP 1 Score: 47.4 bits (111), Expect = 4.0e-04
Identity = 38/142 (26.76%), Postives = 75/142 (52.82%), Query Frame = 0


Query: 55  AVIDLLANHGFSESQISYLANRYPPILSSNPEKTLLPKLLFFQSK-AHSSSEIFEILRSD 114
           +V  LL++ G S   +  + + +P +L+S+PE  +LP L F  ++ + S  +I + +   
Sbjct: 67  SVETLLSSTGLSRPAVGRILDMFPDLLTSDPESEILPVLRFLSNEISISEQDIPKSISRC 126

Query: 115 PWVLSKSLNERIIPAFNYLQAVLGSEEKTLATIKHSVSILSKDLRICLGPNIEILKQ-IG 174
           P +L  S++ ++ PA  +L+  LG   +   T +++V ++S   R  + P IE L++ +G
Sbjct: 127 PRLLISSVDYQLRPALTFLK-TLGFVGRDTITSRNTVLLVSNVERTLI-PKIEYLEEGLG 186

Query: 175 VPDSNILKYLQYQPRVFLTNSI 195
                + K +   P   LT S+
Sbjct: 187 FTREEVAKMVVRSP-ALLTYSV 205

[Close]

BLAST of CSPI03G14260 vs. ExPASy TrEMBL
Match: A0A1S4DSL1 (uncharacterized protein LOC103483826 OS=Cucumis melo OX=3656 GN=LOC103483826 PE=3 SV=1)

HSP 1 Score: 492.3 bits (1266), Expect = 1.8e-135
Identity = 265/365 (72.60%), Postives = 291/365 (79.73%), Query Frame = 0


Query: 1   MSNFFRRLLLLRSPSSVSSHGFS------ATCLSTSSEIVSSPKSASLPSNAVQLNNKGK 60
           MSN FRR+LLLRSPSS  SHGFS         LSTSSEIVSSPKSASL SNAVQL N  K
Sbjct: 1   MSNLFRRILLLRSPSSAFSHGFSECPLKFLRYLSTSSEIVSSPKSASLASNAVQLKNNPK 60

Query: 61  AVIDLLANHGFSESQISYLANRYPPILSSNPEKTLLPKLLFFQSKAHSSSEIFEILRSDP 120
           A++ LLANHGFSESQIS +  R   IL  NPEK L PKLLFFQSK  SS EI +++ S P
Sbjct: 61  ALVALLANHGFSESQISDITKRQSKILCLNPEKILSPKLLFFQSKGLSSPEIVKLVCSIP 120

Query: 121 WVLSKSLNERIIPAFNYLQAVLGSEEKTLATIKHSVSILSKDLRICLGPNIEILKQIGVP 180
            VL+ SLN+RIIP F+YLQAV GSEEKTL TIK    IL+ DLRI +GPNIEILKQIGVP
Sbjct: 121 CVLTGSLNKRIIPNFDYLQAVFGSEEKTLITIKRFAGILAWDLRISVGPNIEILKQIGVP 180

Query: 181 DSNILKYLQYQPRVFLTNSIQFKETVERVKEIGFNTQQLHFVDAVFCLRSMTKSTWDKKV 240
           DSNI KYLQYQPRVFL N ++FKE VERVKE+GFN QQL FV AVF LR+MTKSTWDKKV
Sbjct: 181 DSNIFKYLQYQPRVFLINPVRFKEAVERVKEMGFNPQQLQFVVAVFILRAMTKSTWDKKV 240

Query: 241 EVYRKWGLSEEEIRVAFRKHPRCMTFSVDKINNAMDFLVNKMEYESSFLAERPILLQLSL 300
           EVYRKWGLSEEEIR+AFRK P CM FS DKIN  MDF VNK+  ESSF A RPILL LSL
Sbjct: 241 EVYRKWGLSEEEIRIAFRKSPLCMAFSEDKINGVMDFFVNKLGCESSFAARRPILLSLSL 300

Query: 301 KKRLLPRGHVYEVLLSKGLIKKHQNLPFMLKSPEKHFIEKIINPHKEQIPGLLELYEKKL 360
           KKR+LPRG++Y+VLLSKGLIKKH+NL +  +SPEK FIEK INPH EQI GLLELYE+KL
Sbjct: 301 KKRILPRGYIYQVLLSKGLIKKHENLAWFFESPEKRFIEKFINPHTEQISGLLELYEEKL 360

[Close]

BLAST of CSPI03G14260 vs. ExPASy TrEMBL
Match: A0A1S4DSR4 (uncharacterized protein LOC103483819 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103483819 PE=3 SV=1)

HSP 1 Score: 491.5 bits (1264), Expect = 3.0e-135
Identity = 258/365 (70.68%), Postives = 296/365 (81.10%), Query Frame = 0


Query: 1   MSNFFRRLLLLRSPSSVSSHGF------SATCLSTSSEIVSSPKSASLPSNAVQLNNKGK 60
           MSN FRR+LLLRSPSSV SHGF      S   LSTSSEIVSSPKSASL SN VQ+ N  K
Sbjct: 1   MSNLFRRILLLRSPSSVFSHGFSECPLKSLRFLSTSSEIVSSPKSASLASNVVQIKNNRK 60

Query: 61  AVIDLLANHGFSESQISYLANRYPPILSSNPEKTLLPKLLFFQSKAHSSSEIFEILRSDP 120
           A      NHGFSESQIS +  ++P ILS+NPEK LLPKLLFF+SK  SS EI +I+ S P
Sbjct: 61  AAFSFFENHGFSESQISDIDKKFPQILSANPEKILLPKLLFFRSKGLSSPEIAKIVYSFP 120

Query: 121 WVLSKSLNERIIPAFNYLQAVLGSEEKTLATIKHSVSILSKDLRICLGPNIEILKQIGVP 180
           +VLS SLN RIIPAF+Y+QAVLGSEEKTL  IK+   IL++DLRI +GPNIEILKQIGVP
Sbjct: 121 YVLSGSLNNRIIPAFDYIQAVLGSEEKTLTLIKYFAGILTQDLRISVGPNIEILKQIGVP 180

Query: 181 DSNILKYLQYQPRVFLTNSIQFKETVERVKEIGFNTQQLHFVDAVFCLRSMTKSTWDKKV 240
           DSNI KYLQY+PRVFLTN I+FKETV+RV E+GFN QQL FV AVF LRS+TKSTWDKKV
Sbjct: 181 DSNIFKYLQYRPRVFLTNPIRFKETVDRVTEMGFNPQQLQFVVAVFILRSLTKSTWDKKV 240

Query: 241 EVYRKWGLSEEEIRVAFRKHPRCMTFSVDKINNAMDFLVNKMEYESSFLAERPILLQLSL 300
           EVYRKWGLSEEEI +AF++HP CM  S DKIN  MDF VNK+  ESSF+A RP+L+ LSL
Sbjct: 241 EVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGVMDFFVNKIGCESSFVASRPVLISLSL 300

Query: 301 KKRLLPRGHVYEVLLSKGLIKKHQNLPFMLKSPEKHFIEKIINPHKEQIPGLLELYEKKL 360
           KKR+ PRG+VY+VLL+KGLIKKH ++   +K  EKHFIEKII+PHKEQIPGLLE YE+KL
Sbjct: 301 KKRIFPRGYVYQVLLAKGLIKKHADITMFVKCSEKHFIEKIIDPHKEQIPGLLESYEQKL 360

[Close]

BLAST of CSPI03G14260 vs. ExPASy TrEMBL
Match: A0A1S4DSP1 (uncharacterized protein LOC107990398 OS=Cucumis melo OX=3656 GN=LOC107990398 PE=3 SV=1)

HSP 1 Score: 488.8 bits (1257), Expect = 1.9e-134
Identity = 264/365 (72.33%), Postives = 295/365 (80.82%), Query Frame = 0


Query: 1   MSNFFRRLLLLRSPSSVSSHGFSAT------CLSTSSEIVSSPKSASLPSNAVQLNNKGK 60
           MSN FRR+LLLRSPS V   GFS +       LSTSSEIVSSP+SA L SNAVQL    K
Sbjct: 1   MSNLFRRILLLRSPSPVFPQGFSQSPLKSLRYLSTSSEIVSSPESAPLASNAVQLKTNRK 60

Query: 61  AVIDLLANHGFSESQISYLANRYPPILSSNPEKTLLPKLLFFQSKAHSSSEIFEILRSDP 120
           AVI  LA++GFSESQIS    R+P ILS+NPEK LLPKLLFFQSK  SS EI +++ S+P
Sbjct: 61  AVIAFLADYGFSESQISSFHKRFPQILSANPEKILLPKLLFFQSKGLSSPEIVKLVCSNP 120

Query: 121 WVLSKSLNERIIPAFNYLQAVLGSEEKTLATIKHSVSILSKDLRICLGPNIEILKQIGVP 180
           W L+ SLN+RIIPAF+Y+QAVLGS EK LATIKH  SIL +DL I +GPNIEILKQIGVP
Sbjct: 121 WCLAASLNKRIIPAFDYIQAVLGS-EKALATIKHFASILVRDLGISVGPNIEILKQIGVP 180

Query: 181 DSNILKYLQYQPRVFLTNSIQFKETVERVKEIGFNTQQLHFVDAVFCLRSMTKSTWDKKV 240
           DSNILKYLQYQPRVFL NSI+FKE VERV E+GFN QQL FV AVF LR+MTKSTWDKKV
Sbjct: 181 DSNILKYLQYQPRVFLINSIRFKEIVERVTEMGFNPQQLQFVVAVFALRAMTKSTWDKKV 240

Query: 241 EVYRKWGLSEEEIRVAFRKHPRCMTFSVDKINNAMDFLVNKMEYESSFLAERPILLQLSL 300
           EVYRKWGLSEEEIR+ F++HP CM  S DKIN AMDF VNK+  ESSF+A RP L+ LSL
Sbjct: 241 EVYRKWGLSEEEIRLVFKRHPWCMVVSEDKINGAMDFFVNKIGCESSFVARRPALISLSL 300

Query: 301 KKRLLPRGHVYEVLLSKGLIKKHQNLPFMLKSPEKHFIEKIINPHKEQIPGLLELYEKKL 360
           KKRL PRG+VY+VLL+KGLIKKHQNL    + PEK FIEKIINPHKEQIP LLELYEKKL
Sbjct: 301 KKRLNPRGYVYQVLLAKGLIKKHQNLVSFFEFPEKRFIEKIINPHKEQIPVLLELYEKKL 360

[Close]

BLAST of CSPI03G14260 vs. ExPASy TrEMBL
Match: A0A5D3D116 (Transcription termination factor MTEF1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G00750 PE=3 SV=1)

HSP 1 Score: 483.8 bits (1244), Expect = 6.2e-133
Identity = 262/365 (71.78%), Postives = 293/365 (80.27%), Query Frame = 0


Query: 1   MSNFFRRLLLLRSPSSVSSHGFSAT------CLSTSSEIVSSPKSASLPSNAVQLNNKGK 60
           MSN FRR+LLLRSPS V   GFS +       LSTSSEIVSSP+SA L SNAVQL    K
Sbjct: 1   MSNLFRRILLLRSPSPVFPQGFSQSPLKSLRYLSTSSEIVSSPESAPLASNAVQLKTNRK 60

Query: 61  AVIDLLANHGFSESQISYLANRYPPILSSNPEKTLLPKLLFFQSKAHSSSEIFEILRSDP 120
           AVI  LA++GFSESQIS    R+P ILS+NPEK LLPKLLFFQSK  SS EI +++ S+P
Sbjct: 61  AVIAFLADYGFSESQISSFHKRFPQILSANPEKILLPKLLFFQSKGLSSPEIVKLVCSNP 120

Query: 121 WVLSKSLNERIIPAFNYLQAVLGSEEKTLATIKHSVSILSKDLRICLGPNIEILKQIGVP 180
           W L+ SLN+RIIPAF+Y+QAVLGS EK LATIKH  SIL +DL I +GPNIEILKQIGVP
Sbjct: 121 WCLAASLNKRIIPAFDYIQAVLGS-EKALATIKHFASILVRDLGISVGPNIEILKQIGVP 180

Query: 181 DSNILKYLQYQPRVFLTNSIQFKETVERVKEIGFNTQQLHFVDAVFCLRSMTKSTWDKKV 240
           DSNI KYLQYQPRVFL NSI+FKE VERV E+GFN QQL FV AVF LR+MTKSTWDKKV
Sbjct: 181 DSNIFKYLQYQPRVFLINSIRFKEIVERVTEMGFNPQQLQFVVAVFALRAMTKSTWDKKV 240

Query: 241 EVYRKWGLSEEEIRVAFRKHPRCMTFSVDKINNAMDFLVNKMEYESSFLAERPILLQLSL 300
           EVYRKWGLSEEEIR+ F++HP CM  S DKIN AMDF VNK+  ESSF+A RP L+ LSL
Sbjct: 241 EVYRKWGLSEEEIRLVFKRHPWCMVVSEDKINGAMDFFVNKIGCESSFVARRPALISLSL 300

Query: 301 KKRLLPRGHVYEVLLSKGLIKKHQNLPFMLKSPEKHFIEKIINPHKEQIPGLLELYEKKL 360
           KKRL PRG+VY+VLL+KGLIKKHQNL    + PEK FIEKIIN HKEQIP LLELYEKKL
Sbjct: 301 KKRLNPRGYVYQVLLAKGLIKKHQNLVSFFEFPEKRFIEKIINRHKEQIPVLLELYEKKL 360

[Close]

BLAST of CSPI03G14260 vs. ExPASy TrEMBL
Match: A0A1S4DSM8 (uncharacterized protein LOC103483819 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103483819 PE=3 SV=1)

HSP 1 Score: 483.8 bits (1244), Expect = 6.2e-133
Identity = 257/365 (70.41%), Postives = 288/365 (78.90%), Query Frame = 0


Query: 1   MSNFFRRLLLLRSPSSVSSHGF------SATCLSTSSEIVSSPKSASLPSNAVQLNNKGK 60
           MSN FRR+LLLRSPSSV SHGF      S   LSTSSEIVSSPKSASL SN VQ+ N  K
Sbjct: 1   MSNLFRRILLLRSPSSVFSHGFSECPLKSLRFLSTSSEIVSSPKSASLASNVVQIKNNRK 60

Query: 61  AVIDLLANHGFSESQISYLANRYPPILSSNPEKTLLPKLLFFQSKAHSSSEIFEILRSDP 120
           A      NHGFSESQIS +  ++P ILS+NPEK LLPKLLFFQSK  SS EI +++   P
Sbjct: 61  AAFSFFENHGFSESQISDIDKKFPQILSANPEKILLPKLLFFQSKGLSSPEIVKLVCLYP 120

Query: 121 WVLSKSLNERIIPAFNYLQAVLGSEEKTLATIKHSVSILSKDLRICLGPNIEILKQIGVP 180
           W L  SLN+R+IPAF+Y+QAV GS+EK LA IK    IL  DL+I +GPNIEILKQIGVP
Sbjct: 121 WALRASLNKRMIPAFDYIQAVFGSKEKALAAIKQFAGILCFDLKILVGPNIEILKQIGVP 180

Query: 181 DSNILKYLQYQPRVFLTNSIQFKETVERVKEIGFNTQQLHFVDAVFCLRSMTKSTWDKKV 240
           DSNI KYLQY+PRVFLTN I+FKE VER  E+GFN QQL F+ AVF LRSM KSTWDKKV
Sbjct: 181 DSNIFKYLQYEPRVFLTNPIRFKEIVERAMEMGFNPQQLQFLVAVFILRSMAKSTWDKKV 240

Query: 241 EVYRKWGLSEEEIRVAFRKHPRCMTFSVDKINNAMDFLVNKMEYESSFLAERPILLQLSL 300
           EVYRKWGLSEEEIR+AFRKHP  M  S DKIN AMDF VNKM  ESS    RP+LL LSL
Sbjct: 241 EVYRKWGLSEEEIRLAFRKHPSSMMRSEDKINAAMDFFVNKMGCESSLAVTRPLLLSLSL 300

Query: 301 KKRLLPRGHVYEVLLSKGLIKKHQNLPFMLKSPEKHFIEKIINPHKEQIPGLLELYEKKL 360
           KKR+LPRG+VY+VLLSKGLI+KH+NL    +SPEK FIEKIINPH+EQIPGLLELYE+KL
Sbjct: 301 KKRILPRGYVYKVLLSKGLIEKHKNLVLFFESPEKRFIEKIINPHEEQIPGLLELYEQKL 360

[Close]

BLAST of CSPI03G14260 vs. NCBI nr
Match: KAE8650387.1 (hypothetical protein Csa_010240 [Cucumis sativus])

HSP 1 Score: 698.7 bits (1802), Expect = 2.6e-197
Identity = 358/359 (99.72%), Postives = 358/359 (99.72%), Query Frame = 0


Query: 1   MSNFFRRLLLLRSPSSVSSHGFSATCLSTSSEIVSSPKSASLPSNAVQLNNKGKAVIDLL 60
           MSNFFRRLLLLRSPSSVSSHGFSATCLSTSSEIVSSPKSASLPSNAVQLNNKGKA IDLL
Sbjct: 1   MSNFFRRLLLLRSPSSVSSHGFSATCLSTSSEIVSSPKSASLPSNAVQLNNKGKAAIDLL 60

Query: 61  ANHGFSESQISYLANRYPPILSSNPEKTLLPKLLFFQSKAHSSSEIFEILRSDPWVLSKS 120
           ANHGFSESQISYLANRYPPILSSNPEKTLLPKLLFFQSKAHSSSEIFEILRSDPWVLSKS
Sbjct: 61  ANHGFSESQISYLANRYPPILSSNPEKTLLPKLLFFQSKAHSSSEIFEILRSDPWVLSKS 120

Query: 121 LNERIIPAFNYLQAVLGSEEKTLATIKHSVSILSKDLRICLGPNIEILKQIGVPDSNILK 180
           LNERIIPAFNYLQAVLGSEEKTLATIKHSVSILSKDLRICLGPNIEILKQIGVPDSNILK
Sbjct: 121 LNERIIPAFNYLQAVLGSEEKTLATIKHSVSILSKDLRICLGPNIEILKQIGVPDSNILK 180

Query: 181 YLQYQPRVFLTNSIQFKETVERVKEIGFNTQQLHFVDAVFCLRSMTKSTWDKKVEVYRKW 240
           YLQYQPRVFLTNSIQFKETVERVKEIGFNTQQLHFVDAVFCLRSMTKSTWDKKVEVYRKW
Sbjct: 181 YLQYQPRVFLTNSIQFKETVERVKEIGFNTQQLHFVDAVFCLRSMTKSTWDKKVEVYRKW 240

Query: 241 GLSEEEIRVAFRKHPRCMTFSVDKINNAMDFLVNKMEYESSFLAERPILLQLSLKKRLLP 300
           GLSEEEIRVAFRKHPRCMTFSVDKINNAMDFLVNKMEYESSFLAERPILLQLSLKKRLLP
Sbjct: 241 GLSEEEIRVAFRKHPRCMTFSVDKINNAMDFLVNKMEYESSFLAERPILLQLSLKKRLLP 300

Query: 301 RGHVYEVLLSKGLIKKHQNLPFMLKSPEKHFIEKIINPHKEQIPGLLELYEKKLIDSSR 360
           RGHVYEVLLSKGLIKKHQNLPFMLKSPEKHFIEKIINPHKEQIPGLLELYEKKLIDSSR
Sbjct: 301 RGHVYEVLLSKGLIKKHQNLPFMLKSPEKHFIEKIINPHKEQIPGLLELYEKKLIDSSR 359

[Close]

BLAST of CSPI03G14260 vs. NCBI nr
Match: XP_011651043.2 (uncharacterized protein LOC101221507 isoform X1 [Cucumis sativus] >XP_031737875.1 uncharacterized protein LOC101221507 isoform X1 [Cucumis sativus] >XP_031737876.1 uncharacterized protein LOC101221507 isoform X1 [Cucumis sativus] >KGN57118.2 hypothetical protein Csa_011129 [Cucumis sativus])

HSP 1 Score: 618.6 bits (1594), Expect = 3.4e-173
Identity = 320/365 (87.67%), Postives = 332/365 (90.96%), Query Frame = 0


Query: 1   MSNFFRRLLLLRSPSSVSSHGFSATC------LSTSSEIVSSPKSASLPSNAVQLNNKGK 60
           MSN FRR+LLLRSPSSV +HGFS +       LSTSSEIVSSPKSASLPSNAVQLNNKGK
Sbjct: 1   MSNLFRRILLLRSPSSVFAHGFSESSLRSLRYLSTSSEIVSSPKSASLPSNAVQLNNKGK 60

Query: 61  AVIDLLANHGFSESQISYLANRYPPILSSNPEKTLLPKLLFFQSKAHSSSEIFEILRSDP 120
           AVIDLLANHGFSESQISYLA RYPPILS NPEK LLPKLLFFQSKAHSSSEIFEILRSDP
Sbjct: 61  AVIDLLANHGFSESQISYLAERYPPILSFNPEKNLLPKLLFFQSKAHSSSEIFEILRSDP 120

Query: 121 WVLSKSLNERIIPAFNYLQAVLGSEEKTLATIKHSVSILSKDLRICLGPNIEILKQIGVP 180
           WVLS SLN+RIIPAF+YLQAVLGSEEKTLATIK    IL  DLR  +GPNIEILKQIGVP
Sbjct: 121 WVLSNSLNKRIIPAFDYLQAVLGSEEKTLATIKQFARILGLDLRNAVGPNIEILKQIGVP 180

Query: 181 DSNILKYLQYQPRVFLTNSIQFKETVERVKEIGFNTQQLHFVDAVFCLRSMTKSTWDKKV 240
           DSNILKYLQYQPRVF+TNSIQFKETVERVKE+GFNTQQ  FVDAVFCLRSMTKSTWDKKV
Sbjct: 181 DSNILKYLQYQPRVFMTNSIQFKETVERVKEMGFNTQQWQFVDAVFCLRSMTKSTWDKKV 240

Query: 241 EVYRKWGLSEEEIRVAFRKHPRCMTFSVDKINNAMDFLVNKMEYESSFLAERPILLQLSL 300
           E YRKWGLSEEEIR AFRKHPRCMTFS DKIN AMDF +NKMEYESSF A RPILLQLSL
Sbjct: 241 EAYRKWGLSEEEIRSAFRKHPRCMTFSEDKINGAMDFFINKMEYESSFAARRPILLQLSL 300

Query: 301 KKRLLPRGHVYEVLLSKGLIKKHQNLPFMLKSPEKHFIEKIINPHKEQIPGLLELYEKKL 360
           KKRLLPRGHVYEVLLSKGLIKKHQNLPF+LKSPEKHFIEK INPHKEQIPGLLELYE+KL
Sbjct: 301 KKRLLPRGHVYEVLLSKGLIKKHQNLPFLLKSPEKHFIEKYINPHKEQIPGLLELYEEKL 360

[Close]

BLAST of CSPI03G14260 vs. NCBI nr
Match: XP_004134480.3 (transcription termination factor MTERF4, chloroplastic-like [Cucumis sativus])

HSP 1 Score: 529.6 bits (1363), Expect = 2.1e-146
Identity = 280/365 (76.71%), Postives = 309/365 (84.66%), Query Frame = 0


Query: 1   MSNFFRRLLLLRSPSSVSSHGF------SATCLSTSSEIVSSPKSASLPSNAVQLNNKGK 60
           MS FFR LLLLRSPSSV SHGF      S T LSTSSEIVSSP+SASL SNAVQL N GK
Sbjct: 1   MSIFFRTLLLLRSPSSVFSHGFSESPLKSLTYLSTSSEIVSSPESASLASNAVQLENNGK 60

Query: 61  AVIDLLANHGFSESQISYLANRYPPILSSNPEKTLLPKLLFFQSKAHSSSEIFEILRSDP 120
           AVI LLANHGFS+SQISYLANRYP ILS+NPEKTLLPKLLFFQSK  SS EIFE++RSDP
Sbjct: 61  AVIALLANHGFSQSQISYLANRYPQILSANPEKTLLPKLLFFQSKGLSSPEIFELVRSDP 120

Query: 121 WVLSKSLNERIIPAFNYLQAVLGSEEKTLATIKHSVSILSKDLRICLGPNIEILKQIGVP 180
           WVL  S+N+RIIPAF+Y+QAVLGSEEKTLATIK    ILSKDLRI +GPNIEILKQIGVP
Sbjct: 121 WVLGASINKRIIPAFDYIQAVLGSEEKTLATIKQFAGILSKDLRISVGPNIEILKQIGVP 180

Query: 181 DSNILKYLQYQPRVFLTNSIQFKETVERVKEIGFNTQQLHFVDAVFCLRSMTKSTWDKKV 240
           DS+ILKY  YQPRVFLTNSI+FKETVERV E+GFN QQ  FV AVF LRSMTKSTWDKKV
Sbjct: 181 DSSILKYFPYQPRVFLTNSIRFKETVERVAEMGFNPQQTQFVVAVFALRSMTKSTWDKKV 240

Query: 241 EVYRKWGLSEEEIRVAFRKHPRCMTFSVDKINNAMDFLVNKMEYESSFLAERPILLQLSL 300
           E+ RKWGLSEE+IR+AFR++P CM  S DKIN AMDF VNKM  ESSF A RP+LL  SL
Sbjct: 241 EILRKWGLSEEDIRLAFRRNPWCMRVSEDKINGAMDFFVNKMGCESSFAARRPVLLSFSL 300

Query: 301 KKRLLPRGHVYEVLLSKGLIKKHQNLPFMLKSPEKHFIEKIINPHKEQIPGLLELYEKKL 360
           KKR+LPRG+VY+VLLSKGLIKK++NL    +SPEK FIEK INP KEQIP LLELY++KL
Sbjct: 301 KKRILPRGYVYQVLLSKGLIKKNENLGLFFESPEKRFIEKYINPRKEQIPELLELYKQKL 360

[Close]

BLAST of CSPI03G14260 vs. NCBI nr
Match: KAE8650382.1 (hypothetical protein Csa_011108 [Cucumis sativus])

HSP 1 Score: 520.4 bits (1339), Expect = 1.2e-143
Identity = 267/365 (73.15%), Postives = 310/365 (84.93%), Query Frame = 0


Query: 1   MSNFFRRLLLLRSPSSVSSHGF------SATCLSTSSEIVSSPKSASLPSNAVQLNNKGK 60
           MS FFR LLLLRSPSSV SHGF      S T LSTSSEIVSSP+SASL SNAVQL N GK
Sbjct: 1   MSIFFRTLLLLRSPSSVFSHGFSESPLKSLTYLSTSSEIVSSPESASLASNAVQLENNGK 60

Query: 61  AVIDLLANHGFSESQISYLANRYPPILSSNPEKTLLPKLLFFQSKAHSSSEIFEILRSDP 120
           AVI LLANHGFS+SQISYLANRYP ILS+NPEKTLLPKLLFFQSK  SS EIFE++RSDP
Sbjct: 61  AVIALLANHGFSQSQISYLANRYPQILSANPEKTLLPKLLFFQSKGLSSPEIFELVRSDP 120

Query: 121 WVLSKSLNERIIPAFNYLQAVLGSEEKTLATIKHSVSILSKDLRICLGPNIEILKQIGVP 180
           WVL  S+N+RIIPAF+Y+QAV GSEEKTLA IK  V IL KDLRI +GPNIEILKQIGVP
Sbjct: 121 WVLGASINKRIIPAFDYIQAVFGSEEKTLAVIKQFVGILVKDLRISVGPNIEILKQIGVP 180

Query: 181 DSNILKYLQYQPRVFLTNSIQFKETVERVKEIGFNTQQLHFVDAVFCLRSMTKSTWDKKV 240
           DSNIL YLQ QP++F T+SIQFKE +ERV E+GF+ Q+L F+ AVF LRS+TKS+WDKK+
Sbjct: 181 DSNILSYLQRQPKMFFTSSIQFKEIIERVMEMGFSPQRLQFLVAVFALRSLTKSSWDKKL 240

Query: 241 EVYRKWGLSEEEIRVAFRKHPRCMTFSVDKINNAMDFLVNKMEYESSFLAERPILLQLSL 300
           EVYRKWGLSEE+ R+AFR++P C+TFS DK N+ MDF VNK+  +SSF+A +P+L+ LSL
Sbjct: 241 EVYRKWGLSEEDFRIAFRRNPMCITFSEDKTNSVMDFFVNKIGCQSSFVARKPVLISLSL 300

Query: 301 KKRLLPRGHVYEVLLSKGLIKKHQNLPFMLKSPEKHFIEKIINPHKEQIPGLLELYEKKL 360
           KKR+ PRG+VY+VLLSKGLIKKH+ +  + +SPEK FIEK INPHKEQIPGLLELYE+KL
Sbjct: 301 KKRIFPRGYVYQVLLSKGLIKKHKKIILLFESPEKRFIEKFINPHKEQIPGLLELYEQKL 360

[Close]

BLAST of CSPI03G14260 vs. NCBI nr
Match: XP_016898974.1 (PREDICTED: uncharacterized protein LOC103483826 [Cucumis melo])

HSP 1 Score: 492.3 bits (1266), Expect = 3.6e-135
Identity = 265/365 (72.60%), Postives = 291/365 (79.73%), Query Frame = 0


Query: 1   MSNFFRRLLLLRSPSSVSSHGFS------ATCLSTSSEIVSSPKSASLPSNAVQLNNKGK 60
           MSN FRR+LLLRSPSS  SHGFS         LSTSSEIVSSPKSASL SNAVQL N  K
Sbjct: 1   MSNLFRRILLLRSPSSAFSHGFSECPLKFLRYLSTSSEIVSSPKSASLASNAVQLKNNPK 60

Query: 61  AVIDLLANHGFSESQISYLANRYPPILSSNPEKTLLPKLLFFQSKAHSSSEIFEILRSDP 120
           A++ LLANHGFSESQIS +  R   IL  NPEK L PKLLFFQSK  SS EI +++ S P
Sbjct: 61  ALVALLANHGFSESQISDITKRQSKILCLNPEKILSPKLLFFQSKGLSSPEIVKLVCSIP 120

Query: 121 WVLSKSLNERIIPAFNYLQAVLGSEEKTLATIKHSVSILSKDLRICLGPNIEILKQIGVP 180
            VL+ SLN+RIIP F+YLQAV GSEEKTL TIK    IL+ DLRI +GPNIEILKQIGVP
Sbjct: 121 CVLTGSLNKRIIPNFDYLQAVFGSEEKTLITIKRFAGILAWDLRISVGPNIEILKQIGVP 180

Query: 181 DSNILKYLQYQPRVFLTNSIQFKETVERVKEIGFNTQQLHFVDAVFCLRSMTKSTWDKKV 240
           DSNI KYLQYQPRVFL N ++FKE VERVKE+GFN QQL FV AVF LR+MTKSTWDKKV
Sbjct: 181 DSNIFKYLQYQPRVFLINPVRFKEAVERVKEMGFNPQQLQFVVAVFILRAMTKSTWDKKV 240

Query: 241 EVYRKWGLSEEEIRVAFRKHPRCMTFSVDKINNAMDFLVNKMEYESSFLAERPILLQLSL 300
           EVYRKWGLSEEEIR+AFRK P CM FS DKIN  MDF VNK+  ESSF A RPILL LSL
Sbjct: 241 EVYRKWGLSEEEIRIAFRKSPLCMAFSEDKINGVMDFFVNKLGCESSFAARRPILLSLSL 300

Query: 301 KKRLLPRGHVYEVLLSKGLIKKHQNLPFMLKSPEKHFIEKIINPHKEQIPGLLELYEKKL 360
           KKR+LPRG++Y+VLLSKGLIKKH+NL +  +SPEK FIEK INPH EQI GLLELYE+KL
Sbjct: 301 KKRILPRGYIYQVLLSKGLIKKHENLAWFFESPEKRFIEKFINPHTEQISGLLELYEEKL 360

[Close]

BLAST of CSPI03G14260 vs. TAIR 10
Match: AT5G07900.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 229.6 bits (584), Expect = 4.1e-60
Identity = 124/318 (38.99%), Postives = 199/318 (62.58%), Query Frame = 0


Query: 36  SPKSASLPSNAVQLNN--KGKAVIDLLANHGFSESQISYLANRYPPILSSNPEKTLLPKL 95
           SP SA++ S  + L++  +   V++LL +HGF+ +QIS L  + P +L +N E  LLPKL
Sbjct: 82  SPDSATVASRKLLLDSPERPNTVLNLLRDHGFTTAQISSLVKKRPVLLLANAESVLLPKL 141

Query: 96  LFFQSKAHSSSEIFEILRSDPWVLSKSLNERIIPAFNYLQAVLGSEEKTLATIKHSVSIL 155
            FF S   S S +   L SDP +L++SL  ++IP++N+L++VL S+EK +A ++ +  + 
Sbjct: 142 SFFLSIGVSKSLLARTLASDPTILTRSLVNQLIPSYNFLKSVLDSDEKIVAALRRTTWVF 201

Query: 156 SKDLRICLGPNIEILKQIGVPDSNILKYLQYQPRVFLTNSIQFKETVERVKEIGFNTQQL 215
            +D    L PNI  + + GVP+  I   L + P   +  + +F+   ++ +E+GFN Q+ 
Sbjct: 202 LEDHTKNLVPNINYMAETGVPEKCIKLLLTHFPEAVMQKNHEFQAIAKQAQEMGFNPQKS 261

Query: 216 HFVDAVFCLRSM-TKSTWDKKVEVYRKWGLSEEEIRVAFRKHPRCMTFSVDKINNAMDFL 275
            FV A+  L     KS WDK  EVY++WG SE++I  AF+KHP CM  S  KIN  M++ 
Sbjct: 262 TFVLAIHALSGKGNKSIWDKCFEVYQRWGWSEDDIMCAFKKHPHCMMLSERKINRTMEYF 321

Query: 276 VNKMEYESSFLAERPILLQLSLKKRLLPRGHVYEVLLSKGLIKKHQNLPFMLKSPEKHFI 335
           VN+M      +A+ P++L  SL+KR++PR  V +VL+S GL+K+  +L  +L   EK F+
Sbjct: 322 VNEMNMAPRSIAQCPVVLFFSLEKRIIPRCSVTKVLVSNGLVKEDWSLTSLLVPVEKVFL 381

Query: 336 EKIINPHKEQIPGLLELY 351
           EK++  ++E++P L+ LY
Sbjct: 382 EKLVIKYEEELPELMNLY 399

[Close]

BLAST of CSPI03G14260 vs. TAIR 10
Match: AT1G21150.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 188.7 bits (478), Expect = 8.0e-48
Identity = 101/316 (31.96%), Postives = 186/316 (58.86%), Query Frame = 0


Query: 36  SPKSASLPSNAVQL--NNKGKAVIDLLANHGFSESQISYLANRYPPILSSNPEKTLLPKL 95
           S +SA   S  V+L  + K  +V+ L  +HGF+  QI+ +   +P +LS +PE  + PKL
Sbjct: 69  SLESAKSNSRFVKLVSSKKPDSVLALFKDHGFTNDQITSVIKSFPRVLSLSPEDVISPKL 128

Query: 96  LFFQSKAHSSSEIFEILRSDPWVLSKSLNERIIPAFNYLQAVLGSEEKTLATIKHSVSIL 155
           +FF S   S+S+  +++ S P +LS SL++R+IP ++ L+++L  EE  +  +K  +   
Sbjct: 129 MFFSSIGFSTSDTAKMISSSPKMLSYSLHKRLIPCYDSLKSILVEEESVVKCLKRGIRCF 188

Query: 156 SKDLRICLGPNIEILKQIGVPDSNILKYLQYQPRVFLTNSIQFKETVERVKEIGFNTQQL 215
           S  +  C+   + I +++GVPD +I   +Q  P  F +   +F E + RV   GF+ ++ 
Sbjct: 189 SLKITHCVSLRVSICRELGVPDKSIKWLVQASPFTFFSRERRFNEVLNRVCSYGFDPKKA 248

Query: 216 HFVDAVFCLRSMTKSTWDKKVEVYRKWGLSEEEIRVAFRKHPRCMTFSVDKINNAMDFLV 275
            FV A+      ++S  ++K ++++ +G S+E+   A  + P C+T S +KI   +++LV
Sbjct: 249 GFVHAMVAFDCTSESAMERKFKLFQCFGWSKEDFVAAIMRFPNCVTVSDEKIMYTLEYLV 308

Query: 276 NKMEYESSFLAERPILLQLSLKKRLLPRGHVYEVLLSKGLIKKHQ-NLPFMLKSPEKHFI 335
           N +  ++  +  RP++L LS++KR+ PR  V  +LLSKGL+KK   N   +LK     F+
Sbjct: 309 NNIGLQARDIVARPVVLSLSMEKRIKPRNQVISLLLSKGLVKKEDINYFTILKLKSSEFM 368

Query: 336 EKIINPHKEQIPGLLE 349
           +K +  +++++P L++
Sbjct: 369 DKFVLKYQDEMPQLVQ 384

[Close]

BLAST of CSPI03G14260 vs. TAIR 10
Match: AT5G64950.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 150.6 bits (379), Expect = 2.4e-36
Identity = 89/289 (30.80%), Postives = 160/289 (55.36%), Query Frame = 0


Query: 54  KAVIDLLANHGFSESQISYLANRYPPILSSNPEKTLLPKLLFFQSKAHSSSEIFEILRSD 113
           ++VI +L ++ FS++QI      +P ++  N EK L PKL FF+    + S + + +  +
Sbjct: 72  RSVIQMLKSYSFSDTQIQKSIRVHPRMMFYNVEKILEPKLRFFKDIGFTGSGLGKFVSQN 131

Query: 114 PWVLSKSLNERIIPAFNYLQAVLGSEEKTLATIKHSVS--ILSKDLRICLGPNIEILKQI 173
             V+  SL +++IP    L++++  + + L  I       +LS+D  + L PNI  L+  
Sbjct: 132 SSVVGVSLVKKLIPTVEILKSIVAPKHEDLPVILSRCGWLLLSRDPNLFLLPNISYLETC 191

Query: 174 GVPDSNILKYLQYQPRVFLTNSIQFKETVERVKEIGFNTQQLHFVDAVFCLRSMTKSTWD 233
           G+  S +   L+ QPR+F  +  + +  V R  ++GF       V AV  L S+++ T+D
Sbjct: 192 GIVGSQLASLLRRQPRIFNLSEEKLRGYVSRALDLGFTLNSRMLVHAVISLSSLSEKTFD 251

Query: 234 KKVEVYRKWGLSEEEIRVAFRKHPRCMTFSVDKINNAMDFLVNKMEYESSFLAERPILLQ 293
           +KV+++   G SE+EI    R+ P  +  S DK+    +F + +M  E   LA+RP +L 
Sbjct: 252 RKVKLFMANGFSEDEITDIIRRSPGLIRCSEDKLTLGFEFYLKRMGLEREALAKRPCVLS 311

Query: 294 LSLKKRLLPRGHVYEVLLSKGLI----KKHQNLPFMLKSPEKHFIEKII 337
            +L+KR++PR  V ++L  KGL+    KK +N+  +++  E+ F+EK +
Sbjct: 312 YNLEKRVIPRLKVLQILREKGLLLKEEKKKKNMVGIVEMTEEAFLEKYV 360

[Close]

BLAST of CSPI03G14260 vs. TAIR 10
Match: AT1G61970.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 135.2 bits (339), Expect = 1.0e-31
Identity = 110/394 (27.92%), Postives = 191/394 (48.48%), Query Frame = 0


Query: 13  SPSSVSSHGFSATCLS----------TSSEIVSS----PKSASLPSNAVQLNNKGK--AV 72
           SP+S      SA CLS          T S +V S     K A   S  V   +K    +V
Sbjct: 28  SPTSNFFSSASAACLSPRVGRKGNNFTVSYLVDSLGLTTKLAESISRKVSFEDKNNPDSV 87

Query: 73  IDLLANHGFSESQISYLANRYPPILSSNPEKTLLPKLLFFQSKAHSSSEIFEILRSDPWV 132
           ++LL +HGF+ SQIS +   YP +L ++ EK+L PKL F QS+  SSSEI EI+ S P +
Sbjct: 88  LNLLTSHGFTGSQISTIIRDYPQLLIADAEKSLGPKLQFLQSRGASSSEITEIVSSVPEI 147

Query: 133 LSKSLNERIIPAFNYLQAVLGSEEKTLATIKHSVSILSKDLRICLGPNIEILKQIGVPDS 192
           L K  ++ I   +++++  L  +      + HS+   + + +I    N+ +L+++G+P  
Sbjct: 148 LGKKGHKTISVYYDFIKDTLLEKSSKNEKLCHSLPQGNLENKI---RNVSVLRELGMPHK 207

Query: 193 NILKYL--QYQPRVFLTNSIQFKETVERVKEIGFNTQQLHFVDAVFCLRSMTKSTWDKKV 252
            +   L    QP   +    +F+ET+++V E+GF+     FV+A+  +  M + T ++KV
Sbjct: 208 LLFSLLISDSQP---VCGKEKFEETLKKVVEMGFDPTTSKFVEALQVIYKMNEKTIEEKV 267

Query: 253 EVY--------------RKW---------------------GLSEEEIRVAFRKHPRCMT 312
            +Y              +KW                     G S +E     +  P C+ 
Sbjct: 268 HLYKSLGFDVGDVWSSFKKWPISLRVSEKKMLDSIETFLGLGFSRDEFAKMVKHFPPCIG 327

Query: 313 FSVDKINNAMDFLVNKMEYESSFLAERPILLQLSLKKRLLPRGHVYEVLLSKGLIKKH-Q 351
            S + +    +FLV KM +    +   P +   SL+KR++PRG+V + L+SKGL++    
Sbjct: 328 LSTETVKKKTEFLVKKMNWPLKAVVSNPAVFGYSLEKRIVPRGNVIKALMSKGLMRNELP 387

[Close]

BLAST of CSPI03G14260 vs. TAIR 10
Match: AT1G61970.2 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 135.2 bits (339), Expect = 1.0e-31
Identity = 110/394 (27.92%), Postives = 191/394 (48.48%), Query Frame = 0


Query: 13  SPSSVSSHGFSATCLS----------TSSEIVSS----PKSASLPSNAVQLNNKGK--AV 72
           SP+S      SA CLS          T S +V S     K A   S  V   +K    +V
Sbjct: 28  SPTSNFFSSASAACLSPRVGRKGNNFTVSYLVDSLGLTTKLAESISRKVSFEDKNNPDSV 87

Query: 73  IDLLANHGFSESQISYLANRYPPILSSNPEKTLLPKLLFFQSKAHSSSEIFEILRSDPWV 132
           ++LL +HGF+ SQIS +   YP +L ++ EK+L PKL F QS+  SSSEI EI+ S P +
Sbjct: 88  LNLLTSHGFTGSQISTIIRDYPQLLIADAEKSLGPKLQFLQSRGASSSEITEIVSSVPEI 147

Query: 133 LSKSLNERIIPAFNYLQAVLGSEEKTLATIKHSVSILSKDLRICLGPNIEILKQIGVPDS 192
           L K  ++ I   +++++  L  +      + HS+   + + +I    N+ +L+++G+P  
Sbjct: 148 LGKKGHKTISVYYDFIKDTLLEKSSKNEKLCHSLPQGNLENKI---RNVSVLRELGMPHK 207

Query: 193 NILKYL--QYQPRVFLTNSIQFKETVERVKEIGFNTQQLHFVDAVFCLRSMTKSTWDKKV 252
            +   L    QP   +    +F+ET+++V E+GF+     FV+A+  +  M + T ++KV
Sbjct: 208 LLFSLLISDSQP---VCGKEKFEETLKKVVEMGFDPTTSKFVEALQVIYKMNEKTIEEKV 267

Query: 253 EVY--------------RKW---------------------GLSEEEIRVAFRKHPRCMT 312
            +Y              +KW                     G S +E     +  P C+ 
Sbjct: 268 HLYKSLGFDVGDVWSSFKKWPISLRVSEKKMLDSIETFLGLGFSRDEFAKMVKHFPPCIG 327

Query: 313 FSVDKINNAMDFLVNKMEYESSFLAERPILLQLSLKKRLLPRGHVYEVLLSKGLIKKH-Q 351
            S + +    +FLV KM +    +   P +   SL+KR++PRG+V + L+SKGL++    
Sbjct: 328 LSTETVKKKTEFLVKKMNWPLKAVVSNPAVFGYSLEKRIVPRGNVIKALMSKGLMRNELP 387

The following BLAST results are available for this feature:

BLAST of CSPI03G14260 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FK23	4.9e-10	23.01	Transcription termination factor MTERF8, chloroplastic OS=Arabidopsis thaliana O...	[more]
Q9FM80	2.1e-05	21.81	Transcription termination factor MTERF9, chloroplastic OS=Arabidopsis thaliana O...	[more]
Q84X53	4.0e-04	26.76	Transcription termination factor MTEF1, chloroplastic OS=Arabidopsis thaliana OX...	[more]

BLAST of CSPI03G14260 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4DSL1	1.8e-135	72.60	uncharacterized protein LOC103483826 OS=Cucumis melo OX=3656 GN=LOC103483826 PE=...	[more]
A0A1S4DSR4	3.0e-135	70.68	uncharacterized protein LOC103483819 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S4DSP1	1.9e-134	72.33	uncharacterized protein LOC107990398 OS=Cucumis melo OX=3656 GN=LOC107990398 PE=...	[more]
A0A5D3D116	6.2e-133	71.78	Transcription termination factor MTEF1 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S4DSM8	6.2e-133	70.41	uncharacterized protein LOC103483819 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of CSPI03G14260 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8650387.1	2.6e-197	99.72	hypothetical protein Csa_010240 [Cucumis sativus]	[more]
XP_011651043.2	3.4e-173	87.67	uncharacterized protein LOC101221507 isoform X1 [Cucumis sativus] >XP_031737875....	[more]
XP_004134480.3	2.1e-146	76.71	transcription termination factor MTERF4, chloroplastic-like [Cucumis sativus]	[more]
KAE8650382.1	1.2e-143	73.15	hypothetical protein Csa_011108 [Cucumis sativus]	[more]
XP_016898974.1	3.6e-135	72.60	PREDICTED: uncharacterized protein LOC103483826 [Cucumis melo]	[more]

BLAST of CSPI03G14260 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G07900.1	4.1e-60	38.99	Mitochondrial transcription termination factor family protein	[more]
AT1G21150.1	8.0e-48	31.96	Mitochondrial transcription termination factor family protein	[more]
AT5G64950.1	2.4e-36	30.80	Mitochondrial transcription termination factor family protein	[more]
AT1G61970.1	1.0e-31	27.92	Mitochondrial transcription termination factor family protein	[more]
AT1G61970.2	1.0e-31	27.92	Mitochondrial transcription termination factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	SMART	SM00733	mt_12	coord: 143..174 e-value: 850.0 score: 4.4 coord: 71..103 e-value: 110.0 score: 11.4 coord: 280..314 e-value: 7.7 score: 15.5 coord: 107..139 e-value: 0.13 score: 21.4 coord: 179..209 e-value: 410.0 score: 6.9 coord: 248..279 e-value: 0.18 score: 20.9
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PFAM	PF02536	mTERF	coord: 57..214 e-value: 2.1E-22 score: 79.5 coord: 224..331 e-value: 1.9E-16 score: 59.9
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PANTHER	PTHR13068	CGI-12 PROTEIN-RELATED	coord: 20..356
IPR038538	MTERF superfamily, mitochondrial/chloroplastic	GENE3D	1.25.70.10	Transcription termination factor 3, mitochondrial	coord: 138..344 e-value: 2.4E-41 score: 143.6
None	No IPR available	PANTHER	PTHR13068:SF160	TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN, PUTATIVE ISOFORM 1-RELATED	coord: 20..356

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G14260.1	CSPI03G14260.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006353	DNA-templated transcription, termination
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003690	double-stranded DNA binding