CSPI03G13930 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI03G13930
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	F-box domain-containing protein
Location	Chr3: 10501635 .. 10504909 (-)
RNA-Seq Expression	CSPI03G13930
Synteny	CSPI03G13930

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTTGTTCTTTTAAACTGTTAAAAAGCAATTTCCCAATAACAAATTACGTGTGGAATTTGGTGCGTACAAGAACTCGCCACGTGTATCGCCATCGTCAAAGGCTTCGCCTCCAGCTCTCAACTTCAGCATACTCCGTTCGGAAGCAAGCTCGGTTAGGGATTCAATCCAATCGGCGGCTTTCCTTCTTAGATTGTCTTCTTTCCTTGAAATCCATCGTTCCAGGGCTTCACCATTTTCAATCTACACTAACAAATTTTCCCGGAGAAACAAGCGAATTGAGAGCAATCGGAAATGGGTTTGGATCATCTTTCCATTGACACTGCACTGAAAATTGCTTCTTCCCTTCAGGTTCCAATAGAGTTATTTGTGTAATTATGATCCCTTTTAATTTACTGTAATATTGTTTGTGGATTAATTGATCTTTCTCTGTGGAATTTTGGGCTGTGATTCGGAACGAAGGTATCGGACATTTGTTCTTTGGGCTGTTGTTCGCGGTTTTGTAGGCAACTCTGCGATTCCGATTATCTGTGGGAATCTCTCGCGAGGGAAAGATGGCCTTATATCAATGGTTCTTCTTCGTCAACTCTCGCACAATCCTCCATTTCCATGGTGATCTTTCTGTTTGGCTCTACTCAATTTAGGAATTTGTTCCCCATATTGCCCGTTTTGAATATTTATGTTTCTTCAAATCAATTGAGAGATTTGGAAGGTTGTTTTTTTATTTCTGAACGAATGGTTTGACTATTTTGTGAAACACACAGTAGGTAGTTATCTAGAGTTGAATGTGAGTTCTGTTTCTCCCGTTCATGATTTGGCCTTTTTAGGATTGTTGCTCTATTTCTGATCATATTATGTTTTGTTGCCGTGAAAATTTGTAGGATATTAAATCTTAATAACCTTGTTTCTCTAAGCCTATTATTATTTATATCGGGCTTTATGATCCCTCCAATTATGGGTTTTTGGATTTTTTAGCTTTTTGAAAATCAATCCACTGATCCAGTTATTTGAAAGCTTGTTTTGTTCTTTCTGCTTCGTAATTCAAATGTAGTTGAATTACAGCCCTTTGAATTTTCTCCATCATGTTTGAACTTTTTAGGGAAACGTACACTCGTTCATATCTTAACTCTGAACTTAACTTTTGTCTGTCTCATTGGTGAATTCACTTATACATTTTTGTTTTTCGAAGCAATTAAGGGATTTGAAAGTTCGTTTCGCTCTATTGTTGAATGAGCCATTTTGAGTTTTCCCTGTTTTTTCTCTTAAATGCTTGTTCTTTTTCCTTTATTGAAAATTCGTTTGGATTATCACCTTGTTGGACATATAGCCAACCCTTTTCTGGTATGTTCGTTGTGATGCTTCTGTTTGTGAACAAACAAAATGAAATGTCTTGCAGGGATGGAAAAGCTTTTACATTCAGAGACATATTGAGATATCGGGAAGAGCCCAAGCAGCGGTGAAGTTTGTAGAACAATGCTCTCCCTCTACCCCAATCGAGGGTGGAGACTATCTCAGGACAATTGGTGGCTTGTGGGATTTGAAACTTAGCTTTGTTGATGCTCAAATGGTTCTTTTCAAACCTCAACTCAATGAGCTGCTGAACTTGGTTGGCTTACACTACTGTAGAATTTGGCTTCAAATCCCTGTATGTCCTGCTGCTTTTGCCATTTTAGTTTAATCAACTGTGGGTATAAACCATATCTTAGTTGTTAACTTTTATAGTCAATTCCATTTTGATTCTTTAAATCTTCAAATGTTTTATTTTAGTCCATCAACTTTTTAATATTTGTCAGTCCCTTTTTATTTTGCACAAAAAAAATGCAGTTTGTCTTTCCTATTAATTTTCTGTTGTCATCTATCAAAAAATAGATCTATTTTGAAATTTGATACTTCTCTATTAGATATACACAATTTCAAATTATTGTTTACATGGACGTTTGCTTGTCAGATAAATAAACTAAGGACATATTTTTGTTGGGGTTTTGCTAAACAATTTGTAAAAATTCACTGGCAAGGACTTGACTGATTCTTTGTGCAAAGATCAGGGACGATAAAAAAATGTTTTGAACTTGAAAGACCAAAGTAAAAGCTTCAAGTCCAAAATAGGATTTAAATTAATGTTGTTTTTTCACGTGTGTGGGGTGGAGGGGGTGAGACGACAAATGCTAGGAGCTTCTGAATTGCCTTTCGGCCATTATTTATGGTATTAAATACACATGATTTCATTTACCATCAAATACATAACGTAAGATTTTAGCTTGCGAAGTTGAAGCAGAAGAACTATTAGGAGCTCTTTGGGATGCTGAGTTGGCTAATATTGTCTATTGGTTGTTGTAGTCCATGATTATTACAACGTTGTGAGTTATAATTGTTTGTATTTGGGTTACATAACATTTTAGTATGAGTTACAAATGAGGAGAAAAAATGGTTACAAAGTAGTACAACGTAGACAACAAAGGTTTTTAAATAGTTCAGCTGTAGCTAAGGATACGATATGACAATTGGGAACTTTAAACTATTACAATGAGAGATCCACGTTGAGTGGGTTATAATAGCCCACTCCATTTAAAGCAAGTTGTAGGAGCCCGATGCCTCCTTAATGGTTAGAAAGTTTTTTTTTTCTAAAGTAAAACAGGTACAAAAGAAAATACTGAAATTGTTGAGTTGATTTCCCACTTCTTGTAGGCGAATCAAATCATGGAAGCACTTCAAAGATGCAAGATAGCAGAGAGGCATATATGTGTGAAATGGTGGAAGCTGGGAAGATGGTTTTATGGATTCCGTATGAGAGACGAACAACAAACTCGTCGAGTCTCTTTGGCAGAACTCATGACAGAAGAAGGGGAAGACGTTCTTGGGGTGCTTAGCCGAGGTGCTGTCCACGAGGTTCTTCGAGTTCAGGTTTCTGTAGGTGATTCCTTTGCCGGTCACTGGTCTCGGCAAAGCACATAAAATGAAAACACCCTTAGCATCATCTTCCACGTAAGCATTCTGCAACTGCAATAATCTATATGCAAATAGTTATTTCATAATGCATTTCCAATAATTGCTTGTAGATTATTTATGCAGATATCAAAATGTAAATAGACGTTGCTCATTCGGGTTTGATTTATACTAAGTTGTAGTTATATCTATGCACATCATTAACTGGTGTATCTTGTAAATTATTAAGACTCGAGAGCTTTTGGCTCAAAGTATTGGGTTTCTGCCAATCTTATTCTTTAGTATTGCTATTTCTAGTTATTATACAATAATTAATTAGGTTTTTGTTGGGGTG

mRNA sequence

GTTTGTTCTTTTAAACTGTTAAAAAGCAATTTCCCAATAACAAATTACGTGTGGAATTTGGTGCGTACAAGAACTCGCCACGTGTATCGCCATCGTCAAAGGCTTCGCCTCCAGCTCTCAACTTCAGCATACTCCGTTCGGAAGCAAGCTCGGTTAGGGATTCAATCCAATCGGCGGCTTTCCTTCTTAGATTGTCTTCTTTCCTTGAAATCCATCGTTCCAGGGCTTCACCATTTTCAATCTACACTAACAAATTTTCCCGGAGAAACAAGCGAATTGAGAGCAATCGGAAATGGGTTTGGATCATCTTTCCATTGACACTGCACTGAAAATTGCTTCTTCCCTTCAGGTATCGGACATTTGTTCTTTGGGCTGTTGTTCGCGGTTTTGTAGGCAACTCTGCGATTCCGATTATCTGTGGGAATCTCTCGCGAGGGAAAGATGGCCTTATATCAATGGTTCTTCTTCGTCAACTCTCGCACAATCCTCCATTTCCATGGGATGGAAAAGCTTTTACATTCAGAGACATATTGAGATATCGGGAAGAGCCCAAGCAGCGGTGAAGTTTGTAGAACAATGCTCTCCCTCTACCCCAATCGAGGGTGGAGACTATCTCAGGACAATTGGTGGCTTGTGGGATTTGAAACTTAGCTTTGTTGATGCTCAAATGGTTCTTTTCAAACCTCAACTCAATGAGCTGCTGAACTTGGTTGGCTTACACTACTGTAGAATTTGGCTTCAAATCCCTGCGAATCAAATCATGGAAGCACTTCAAAGATGCAAGATAGCAGAGAGGCATATATGTGTGAAATGGTGGAAGCTGGGAAGATGGTTTTATGGATTCCGTATGAGAGACGAACAACAAACTCGTCGAGTCTCTTTGGCAGAACTCATGACAGAAGAAGGGGAAGACGTTCTTGGGGTGCTTAGCCGAGGTGCTGTCCACGAGGTTCTTCGAGTTCAGGTTTCTGTAGGTGATTCCTTTGCCGGTCACTGGTCTCGGCAAAGCACATAAAATGAAAACACCCTTAGCATCATCTTCCACGTAAGCATTCTGCAACTGCAATAATCTATATGCAAATAGTTATTTCATAATGCATTTCCAATAATTGCTTGTAGATTATTTATGCAGATATCAAAATGTAAATAGACGTTGCTCATTCGGGTTTGATTTATACTAAGTTGTAGTTATATCTATGCACATCATTAACTGGTGTATCTTGTAAATTATTAAGACTCGAGAGCTTTTGGCTCAAAGTATTGGGTTTCTGCCAATCTTATTCTTTAGTATTGCTATTTCTAGTTATTATACAATAATTAATTAGGTTTTTGTTGGGGTG

Coding sequence (CDS)

ATGGGTTTGGATCATCTTTCCATTGACACTGCACTGAAAATTGCTTCTTCCCTTCAGGTATCGGACATTTGTTCTTTGGGCTGTTGTTCGCGGTTTTGTAGGCAACTCTGCGATTCCGATTATCTGTGGGAATCTCTCGCGAGGGAAAGATGGCCTTATATCAATGGTTCTTCTTCGTCAACTCTCGCACAATCCTCCATTTCCATGGGATGGAAAAGCTTTTACATTCAGAGACATATTGAGATATCGGGAAGAGCCCAAGCAGCGGTGAAGTTTGTAGAACAATGCTCTCCCTCTACCCCAATCGAGGGTGGAGACTATCTCAGGACAATTGGTGGCTTGTGGGATTTGAAACTTAGCTTTGTTGATGCTCAAATGGTTCTTTTCAAACCTCAACTCAATGAGCTGCTGAACTTGGTTGGCTTACACTACTGTAGAATTTGGCTTCAAATCCCTGCGAATCAAATCATGGAAGCACTTCAAAGATGCAAGATAGCAGAGAGGCATATATGTGTGAAATGGTGGAAGCTGGGAAGATGGTTTTATGGATTCCGTATGAGAGACGAACAACAAACTCGTCGAGTCTCTTTGGCAGAACTCATGACAGAAGAAGGGGAAGACGTTCTTGGGGTGCTTAGCCGAGGTGCTGTCCACGAGGTTCTTCGAGTTCAGGTTTCTGTAGGTGATTCCTTTGCCGGTCACTGGTCTCGGCAAAGCACATAA

Protein sequence

MGLDHLSIDTALKIASSLQVSDICSLGCCSRFCRQLCDSDYLWESLARERWPYINGSSSSTLAQSSISMGWKSFYIQRHIEISGRAQAAVKFVEQCSPSTPIEGGDYLRTIGGLWDLKLSFVDAQMVLFKPQLNELLNLVGLHYCRIWLQIPANQIMEALQRCKIAERHICVKWWKLGRWFYGFRMRDEQQTRRVSLAELMTEEGEDVLGVLSRGAVHEVLRVQVSVGDSFAGHWSRQST*

Homology

[Close]

BLAST of CSPI03G13930 vs. ExPASy TrEMBL
Match: A0A0A0L7T9 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G151470 PE=4 SV=1)

HSP 1 Score: 493.4 bits (1269), Expect = 5.3e-136
Identity = 239/240 (99.58%), Postives = 240/240 (100.00%), Query Frame = 0


Query: 1   MGLDHLSIDTALKIASSLQVSDICSLGCCSRFCRQLCDSDYLWESLARERWPYINGSSSS 60
           MGLD+LSIDTALKIASSLQVSDICSLGCCSRFCRQLCDSDYLWESLARERWPYINGSSSS
Sbjct: 1   MGLDNLSIDTALKIASSLQVSDICSLGCCSRFCRQLCDSDYLWESLARERWPYINGSSSS 60

Query: 61  TLAQSSISMGWKSFYIQRHIEISGRAQAAVKFVEQCSPSTPIEGGDYLRTIGGLWDLKLS 120
           TLAQSSISMGWKSFYIQRHIEISGRAQAAVKFVEQCSPSTPIEGGDYLRTIGGLWDLKLS
Sbjct: 61  TLAQSSISMGWKSFYIQRHIEISGRAQAAVKFVEQCSPSTPIEGGDYLRTIGGLWDLKLS 120

Query: 121 FVDAQMVLFKPQLNELLNLVGLHYCRIWLQIPANQIMEALQRCKIAERHICVKWWKLGRW 180
           FVDAQMVLFKPQLNELLNLVGLHYCRIWLQIPANQIMEALQRCKIAERHICVKWWKLGRW
Sbjct: 121 FVDAQMVLFKPQLNELLNLVGLHYCRIWLQIPANQIMEALQRCKIAERHICVKWWKLGRW 180

Query: 181 FYGFRMRDEQQTRRVSLAELMTEEGEDVLGVLSRGAVHEVLRVQVSVGDSFAGHWSRQST 240
           FYGFRMRDEQQTRRVSLAELMTEEGEDVLGVLSRGAVHEVLRVQVSVGDSFAGHWSRQST
Sbjct: 181 FYGFRMRDEQQTRRVSLAELMTEEGEDVLGVLSRGAVHEVLRVQVSVGDSFAGHWSRQST 240

[Close]

BLAST of CSPI03G13930 vs. ExPASy TrEMBL
Match: A0A5A7U795 (F-box-like domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G00440 PE=4 SV=1)

HSP 1 Score: 483.4 bits (1243), Expect = 5.5e-133
Identity = 232/240 (96.67%), Postives = 235/240 (97.92%), Query Frame = 0


Query: 1   MGLDHLSIDTALKIASSLQVSDICSLGCCSRFCRQLCDSDYLWESLARERWPYINGSSSS 60
           MG DHL  DTALKIASSLQVS+ICSLGCCSRFCRQLCDSDYLWESLARERWPYINGSSSS
Sbjct: 1   MGFDHLPTDTALKIASSLQVSEICSLGCCSRFCRQLCDSDYLWESLARERWPYINGSSSS 60

Query: 61  TLAQSSISMGWKSFYIQRHIEISGRAQAAVKFVEQCSPSTPIEGGDYLRTIGGLWDLKLS 120
           TLAQS ISMGWKSFYIQRHIEI GRAQAAVKFVEQCSPSTPIEGGDYLRTIGGLWDLKLS
Sbjct: 61  TLAQSPISMGWKSFYIQRHIEILGRAQAAVKFVEQCSPSTPIEGGDYLRTIGGLWDLKLS 120

Query: 121 FVDAQMVLFKPQLNELLNLVGLHYCRIWLQIPANQIMEALQRCKIAERHICVKWWKLGRW 180
           FVDAQMVLFKPQLNELLNLVGLHYCRIWLQ+PANQI+EALQRCKIAERHICVKWWKLGRW
Sbjct: 121 FVDAQMVLFKPQLNELLNLVGLHYCRIWLQVPANQILEALQRCKIAERHICVKWWKLGRW 180

Query: 181 FYGFRMRDEQQTRRVSLAELMTEEGEDVLGVLSRGAVHEVLRVQVSVGDSFAGHWSRQST 240
           FYGFRMRDEQQTRRVSLAELMTEEGEDVLGVLSRGAVHEVLRVQVSVGDSFAGHWSRQST
Sbjct: 181 FYGFRMRDEQQTRRVSLAELMTEEGEDVLGVLSRGAVHEVLRVQVSVGDSFAGHWSRQST 240

[Close]

BLAST of CSPI03G13930 vs. ExPASy TrEMBL
Match: A0A1S3AXY1 (uncharacterized protein LOC103483796 OS=Cucumis melo OX=3656 GN=LOC103483796 PE=4 SV=1)

HSP 1 Score: 483.4 bits (1243), Expect = 5.5e-133
Identity = 232/240 (96.67%), Postives = 235/240 (97.92%), Query Frame = 0


Query: 1   MGLDHLSIDTALKIASSLQVSDICSLGCCSRFCRQLCDSDYLWESLARERWPYINGSSSS 60
           MG DHL  DTALKIASSLQVS+ICSLGCCSRFCRQLCDSDYLWESLARERWPYINGSSSS
Sbjct: 1   MGFDHLPTDTALKIASSLQVSEICSLGCCSRFCRQLCDSDYLWESLARERWPYINGSSSS 60

Query: 61  TLAQSSISMGWKSFYIQRHIEISGRAQAAVKFVEQCSPSTPIEGGDYLRTIGGLWDLKLS 120
           TLAQS ISMGWKSFYIQRHIEI GRAQAAVKFVEQCSPSTPIEGGDYLRTIGGLWDLKLS
Sbjct: 61  TLAQSPISMGWKSFYIQRHIEILGRAQAAVKFVEQCSPSTPIEGGDYLRTIGGLWDLKLS 120

Query: 121 FVDAQMVLFKPQLNELLNLVGLHYCRIWLQIPANQIMEALQRCKIAERHICVKWWKLGRW 180
           FVDAQMVLFKPQLNELLNLVGLHYCRIWLQ+PANQI+EALQRCKIAERHICVKWWKLGRW
Sbjct: 121 FVDAQMVLFKPQLNELLNLVGLHYCRIWLQVPANQILEALQRCKIAERHICVKWWKLGRW 180

Query: 181 FYGFRMRDEQQTRRVSLAELMTEEGEDVLGVLSRGAVHEVLRVQVSVGDSFAGHWSRQST 240
           FYGFRMRDEQQTRRVSLAELMTEEGEDVLGVLSRGAVHEVLRVQVSVGDSFAGHWSRQST
Sbjct: 181 FYGFRMRDEQQTRRVSLAELMTEEGEDVLGVLSRGAVHEVLRVQVSVGDSFAGHWSRQST 240

[Close]

BLAST of CSPI03G13930 vs. ExPASy TrEMBL
Match: A0A6J1IUP6 (uncharacterized protein LOC111479465 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111479465 PE=4 SV=1)

HSP 1 Score: 406.4 bits (1043), Expect = 8.5e-110
Identity = 199/239 (83.26%), Postives = 214/239 (89.54%), Query Frame = 0


Query: 1   MGLDHLSIDTALKIASSLQVSDICSLGCCSRFCRQLCDSDYLWESLARERWPYIN----- 60
           MGL  L ID ALKIASSLQ SDICSLGCCSRFC+QLCDSDYLWESL RERWPYIN     
Sbjct: 1   MGLHLLPIDAALKIASSLQASDICSLGCCSRFCKQLCDSDYLWESLTRERWPYINVASST 60

Query: 61  GSSSSTLAQSSISMGWKSFYIQRHIEISGRAQAAVKFVEQCSPSTPIEGGDYLRTIGGLW 120
           GSSSSTLAQS ISMGWKSFYIQRHIEIS RAQAAVKF+EQ SPS+PIEGGDYLRTI GLW
Sbjct: 61  GSSSSTLAQSPISMGWKSFYIQRHIEISRRAQAAVKFIEQYSPSSPIEGGDYLRTIVGLW 120

Query: 121 DLKLSFVDAQMVLFKPQLNELLNLVGLHYCRIWLQIPANQIMEALQRCKIAERHICVKWW 180
           DLKLSF+DAQMVLFKP LNELLNLVGLHYC+ WLQ+P N+I+EAL+RCKI+ER + VKWW
Sbjct: 121 DLKLSFIDAQMVLFKPHLNELLNLVGLHYCQSWLQVPGNEIIEALERCKISERQVSVKWW 180

Query: 181 KLGRWFYGFRMRDEQQTRRVSLAELMTEEGEDVLGVLSRGAVHEVLRVQVSVGDSFAGH 235
           KLGRWFYGFRMRDEQQTRRVSLA L+ EEGEDVL VLSRGAV+EVLRVQVSVG+ FA +
Sbjct: 181 KLGRWFYGFRMRDEQQTRRVSLAALVAEEGEDVLEVLSRGAVNEVLRVQVSVGEPFASN 239

[Close]

BLAST of CSPI03G13930 vs. ExPASy TrEMBL
Match: A0A6J1GTL4 (uncharacterized protein LOC111457456 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111457456 PE=4 SV=1)

HSP 1 Score: 403.7 bits (1036), Expect = 5.5e-109
Identity = 198/237 (83.54%), Postives = 213/237 (89.87%), Query Frame = 0


Query: 1   MGLDHLSIDTALKIASSLQVSDICSLGCCSRFCRQLCDSDYLWESLARERWPYIN---GS 60
           MGL  L ID ALKIASSLQ SDICSLGCCSRFC+QLCDSDYLWESL RERWPYIN    S
Sbjct: 1   MGLHLLPIDAALKIASSLQASDICSLGCCSRFCKQLCDSDYLWESLTRERWPYINVASVS 60

Query: 61  SSSTLAQSSISMGWKSFYIQRHIEISGRAQAAVKFVEQCSPSTPIEGGDYLRTIGGLWDL 120
           SSSTLAQS ISMGWKSFYIQRHIEIS RAQAAVKF+EQ SPS+PIEGGDYLRTI GLWDL
Sbjct: 61  SSSTLAQSPISMGWKSFYIQRHIEISRRAQAAVKFIEQYSPSSPIEGGDYLRTIVGLWDL 120

Query: 121 KLSFVDAQMVLFKPQLNELLNLVGLHYCRIWLQIPANQIMEALQRCKIAERHICVKWWKL 180
           KLSF+DAQMVLFKP LNELLNLVGLHYC+ WLQ+P N+I+EAL+RCKI+ER + VKWWKL
Sbjct: 121 KLSFIDAQMVLFKPHLNELLNLVGLHYCQSWLQVPGNEIIEALERCKISERQVSVKWWKL 180

Query: 181 GRWFYGFRMRDEQQTRRVSLAELMTEEGEDVLGVLSRGAVHEVLRVQVSVGDSFAGH 235
           GRWFYGFRMRDEQQTRRVSLA L+ EEGEDVL VLSRGAV+EVLRVQVSVG+ FA +
Sbjct: 181 GRWFYGFRMRDEQQTRRVSLAALIAEEGEDVLEVLSRGAVNEVLRVQVSVGEPFASN 237

[Close]

BLAST of CSPI03G13930 vs. NCBI nr
Match: XP_004134187.1 (uncharacterized protein LOC101218430 [Cucumis sativus] >KGN57069.1 hypothetical protein Csa_010933 [Cucumis sativus])

HSP 1 Score: 493.4 bits (1269), Expect = 1.1e-135
Identity = 239/240 (99.58%), Postives = 240/240 (100.00%), Query Frame = 0


Query: 1   MGLDHLSIDTALKIASSLQVSDICSLGCCSRFCRQLCDSDYLWESLARERWPYINGSSSS 60
           MGLD+LSIDTALKIASSLQVSDICSLGCCSRFCRQLCDSDYLWESLARERWPYINGSSSS
Sbjct: 1   MGLDNLSIDTALKIASSLQVSDICSLGCCSRFCRQLCDSDYLWESLARERWPYINGSSSS 60

Query: 61  TLAQSSISMGWKSFYIQRHIEISGRAQAAVKFVEQCSPSTPIEGGDYLRTIGGLWDLKLS 120
           TLAQSSISMGWKSFYIQRHIEISGRAQAAVKFVEQCSPSTPIEGGDYLRTIGGLWDLKLS
Sbjct: 61  TLAQSSISMGWKSFYIQRHIEISGRAQAAVKFVEQCSPSTPIEGGDYLRTIGGLWDLKLS 120

Query: 121 FVDAQMVLFKPQLNELLNLVGLHYCRIWLQIPANQIMEALQRCKIAERHICVKWWKLGRW 180
           FVDAQMVLFKPQLNELLNLVGLHYCRIWLQIPANQIMEALQRCKIAERHICVKWWKLGRW
Sbjct: 121 FVDAQMVLFKPQLNELLNLVGLHYCRIWLQIPANQIMEALQRCKIAERHICVKWWKLGRW 180

Query: 181 FYGFRMRDEQQTRRVSLAELMTEEGEDVLGVLSRGAVHEVLRVQVSVGDSFAGHWSRQST 240
           FYGFRMRDEQQTRRVSLAELMTEEGEDVLGVLSRGAVHEVLRVQVSVGDSFAGHWSRQST
Sbjct: 181 FYGFRMRDEQQTRRVSLAELMTEEGEDVLGVLSRGAVHEVLRVQVSVGDSFAGHWSRQST 240

[Close]

BLAST of CSPI03G13930 vs. NCBI nr
Match: XP_008438803.1 (PREDICTED: uncharacterized protein LOC103483796 [Cucumis melo] >KAA0049441.1 F-box-like domain-containing protein [Cucumis melo var. makuwa] >TYK16120.1 F-box-like domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 483.4 bits (1243), Expect = 1.1e-132
Identity = 232/240 (96.67%), Postives = 235/240 (97.92%), Query Frame = 0


Query: 1   MGLDHLSIDTALKIASSLQVSDICSLGCCSRFCRQLCDSDYLWESLARERWPYINGSSSS 60
           MG DHL  DTALKIASSLQVS+ICSLGCCSRFCRQLCDSDYLWESLARERWPYINGSSSS
Sbjct: 1   MGFDHLPTDTALKIASSLQVSEICSLGCCSRFCRQLCDSDYLWESLARERWPYINGSSSS 60

Query: 61  TLAQSSISMGWKSFYIQRHIEISGRAQAAVKFVEQCSPSTPIEGGDYLRTIGGLWDLKLS 120
           TLAQS ISMGWKSFYIQRHIEI GRAQAAVKFVEQCSPSTPIEGGDYLRTIGGLWDLKLS
Sbjct: 61  TLAQSPISMGWKSFYIQRHIEILGRAQAAVKFVEQCSPSTPIEGGDYLRTIGGLWDLKLS 120

Query: 121 FVDAQMVLFKPQLNELLNLVGLHYCRIWLQIPANQIMEALQRCKIAERHICVKWWKLGRW 180
           FVDAQMVLFKPQLNELLNLVGLHYCRIWLQ+PANQI+EALQRCKIAERHICVKWWKLGRW
Sbjct: 121 FVDAQMVLFKPQLNELLNLVGLHYCRIWLQVPANQILEALQRCKIAERHICVKWWKLGRW 180

Query: 181 FYGFRMRDEQQTRRVSLAELMTEEGEDVLGVLSRGAVHEVLRVQVSVGDSFAGHWSRQST 240
           FYGFRMRDEQQTRRVSLAELMTEEGEDVLGVLSRGAVHEVLRVQVSVGDSFAGHWSRQST
Sbjct: 181 FYGFRMRDEQQTRRVSLAELMTEEGEDVLGVLSRGAVHEVLRVQVSVGDSFAGHWSRQST 240

[Close]

BLAST of CSPI03G13930 vs. NCBI nr
Match: XP_038893805.1 (uncharacterized protein LOC120082593 [Benincasa hispida])

HSP 1 Score: 460.7 bits (1184), Expect = 7.8e-126
Identity = 218/236 (92.37%), Postives = 226/236 (95.76%), Query Frame = 0


Query: 1   MGLDHLSIDTALKIASSLQVSDICSLGCCSRFCRQLCDSDYLWESLARERWPYINGSSSS 60
           MGL+HL IDTALKIASSLQ SDICSLGCCSRFCRQLCDSDYLWESLARERWPYINGSS S
Sbjct: 1   MGLNHLPIDTALKIASSLQASDICSLGCCSRFCRQLCDSDYLWESLARERWPYINGSSPS 60

Query: 61  TLAQSSISMGWKSFYIQRHIEISGRAQAAVKFVEQCSPSTPIEGGDYLRTIGGLWDLKLS 120
           TLAQS ISMGWKS YIQRHIEI GRAQAAVKF+EQCSPSTPIEGGDYLRTIGGLWDLKLS
Sbjct: 61  TLAQSPISMGWKSLYIQRHIEILGRAQAAVKFIEQCSPSTPIEGGDYLRTIGGLWDLKLS 120

Query: 121 FVDAQMVLFKPQLNELLNLVGLHYCRIWLQIPANQIMEALQRCKIAERHICVKWWKLGRW 180
           F+DAQMVLFKPQLNELLNLVGLHYCR WLQ+PANQ+MEALQRCK+AER+ICVKWWKLGRW
Sbjct: 121 FIDAQMVLFKPQLNELLNLVGLHYCRNWLQVPANQVMEALQRCKVAERYICVKWWKLGRW 180

Query: 181 FYGFRMRDEQQTRRVSLAELMTEEGEDVLGVLSRGAVHEVLRVQVSVGDSFAGHWS 237
           FYGFRMRDEQQTRRVSLAEL+TEEGEDVLGVLSRGAVHEVLRVQVS GD FA HWS
Sbjct: 181 FYGFRMRDEQQTRRVSLAELVTEEGEDVLGVLSRGAVHEVLRVQVSAGDPFASHWS 236

[Close]

BLAST of CSPI03G13930 vs. NCBI nr
Match: XP_022979915.1 (uncharacterized protein LOC111479465 isoform X1 [Cucurbita maxima] >XP_023526476.1 uncharacterized protein LOC111789966 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 406.4 bits (1043), Expect = 1.8e-109
Identity = 199/239 (83.26%), Postives = 214/239 (89.54%), Query Frame = 0


Query: 1   MGLDHLSIDTALKIASSLQVSDICSLGCCSRFCRQLCDSDYLWESLARERWPYIN----- 60
           MGL  L ID ALKIASSLQ SDICSLGCCSRFC+QLCDSDYLWESL RERWPYIN     
Sbjct: 1   MGLHLLPIDAALKIASSLQASDICSLGCCSRFCKQLCDSDYLWESLTRERWPYINVASST 60

Query: 61  GSSSSTLAQSSISMGWKSFYIQRHIEISGRAQAAVKFVEQCSPSTPIEGGDYLRTIGGLW 120
           GSSSSTLAQS ISMGWKSFYIQRHIEIS RAQAAVKF+EQ SPS+PIEGGDYLRTI GLW
Sbjct: 61  GSSSSTLAQSPISMGWKSFYIQRHIEISRRAQAAVKFIEQYSPSSPIEGGDYLRTIVGLW 120

Query: 121 DLKLSFVDAQMVLFKPQLNELLNLVGLHYCRIWLQIPANQIMEALQRCKIAERHICVKWW 180
           DLKLSF+DAQMVLFKP LNELLNLVGLHYC+ WLQ+P N+I+EAL+RCKI+ER + VKWW
Sbjct: 121 DLKLSFIDAQMVLFKPHLNELLNLVGLHYCQSWLQVPGNEIIEALERCKISERQVSVKWW 180

Query: 181 KLGRWFYGFRMRDEQQTRRVSLAELMTEEGEDVLGVLSRGAVHEVLRVQVSVGDSFAGH 235
           KLGRWFYGFRMRDEQQTRRVSLA L+ EEGEDVL VLSRGAV+EVLRVQVSVG+ FA +
Sbjct: 181 KLGRWFYGFRMRDEQQTRRVSLAALVAEEGEDVLEVLSRGAVNEVLRVQVSVGEPFASN 239

[Close]

BLAST of CSPI03G13930 vs. NCBI nr
Match: KAG6582240.1 (CASP-like protein 1D1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 406.4 bits (1043), Expect = 1.8e-109
Identity = 199/239 (83.26%), Postives = 214/239 (89.54%), Query Frame = 0


Query: 1   MGLDHLSIDTALKIASSLQVSDICSLGCCSRFCRQLCDSDYLWESLARERWPYIN----- 60
           MGL  L ID ALKIASSLQ SDICSLGCCSRFC+QLCDSDYLWESL RERWPYIN     
Sbjct: 198 MGLHLLPIDAALKIASSLQASDICSLGCCSRFCKQLCDSDYLWESLTRERWPYINVASST 257

Query: 61  GSSSSTLAQSSISMGWKSFYIQRHIEISGRAQAAVKFVEQCSPSTPIEGGDYLRTIGGLW 120
           GSSSSTLAQS ISMGWKSFYIQRHIEIS RAQAAVKF+EQ SPS+PIEGGDYLRTI GLW
Sbjct: 258 GSSSSTLAQSPISMGWKSFYIQRHIEISRRAQAAVKFIEQYSPSSPIEGGDYLRTIVGLW 317

Query: 121 DLKLSFVDAQMVLFKPQLNELLNLVGLHYCRIWLQIPANQIMEALQRCKIAERHICVKWW 180
           DLKLSF+DAQMVLFKP LNELLNLVGLHYC+ WLQ+P N+I+EAL+RCKI+ER + VKWW
Sbjct: 318 DLKLSFIDAQMVLFKPHLNELLNLVGLHYCQSWLQVPGNEIIEALERCKISERQVSVKWW 377

Query: 181 KLGRWFYGFRMRDEQQTRRVSLAELMTEEGEDVLGVLSRGAVHEVLRVQVSVGDSFAGH 235
           KLGRWFYGFRMRDEQQTRRVSLA L+ EEGEDVL VLSRGAV+EVLRVQVSVG+ FA +
Sbjct: 378 KLGRWFYGFRMRDEQQTRRVSLAALVAEEGEDVLEVLSRGAVNEVLRVQVSVGEPFASN 436

[Close]

BLAST of CSPI03G13930 vs. TAIR 10
Match: AT4G15563.1 (unknown protein; Has 36 Blast hits to 36 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 127.5 bits (319), Expect = 1.5e-29
Identity = 63/152 (41.45%), Postives = 96/152 (63.16%), Query Frame = 0


Query: 78  RHIEISGRAQAAVKFVEQCSPSTPIEGGDYLRTIGGLWDLKLSFVDAQMVLFKPQLNELL 137
           +H E++ RA   +K+V +   +  +E G YL  +  +  ++  F D ++  FKP L+ LL
Sbjct: 2   QHKEMASRASEVIKYVTKSPATLSLEAGIYLHAVETMSSMRFGFQDVELFFFKPNLSVLL 61

Query: 138 NLVGLHYCRIWLQIPANQIMEALQRCKIAERHICVKWWKLGRWFYGFRMRDEQQTRRVSL 197
           NL+GL YC   L+    Q+++ L++C I+E+ + VKW  LGRW  G RMRD+  +R+VSL
Sbjct: 62  NLIGLIYCIQHLKPRREQVVDVLRQCGISEQLVWVKWLTLGRWSGGSRMRDDIVSRQVSL 121

Query: 198 AELMTEEGEDVLGVLSRGAVHEVLRVQVSVGD 230
            +++T + E VL VL RG VHEVLRV +S  D
Sbjct: 122 VDVVTGKEETVLRVLQRGVVHEVLRVCISTVD 153

The following BLAST results are available for this feature:

BLAST of CSPI03G13930 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI03G13930 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L7T9	5.3e-136	99.58	F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G151470 PE=4 ...	[more]
A0A5A7U795	5.5e-133	96.67	F-box-like domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A1S3AXY1	5.5e-133	96.67	uncharacterized protein LOC103483796 OS=Cucumis melo OX=3656 GN=LOC103483796 PE=...	[more]
A0A6J1IUP6	8.5e-110	83.26	uncharacterized protein LOC111479465 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1GTL4	5.5e-109	83.54	uncharacterized protein LOC111457456 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of CSPI03G13930 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004134187.1	1.1e-135	99.58	uncharacterized protein LOC101218430 [Cucumis sativus] >KGN57069.1 hypothetical ...	[more]
XP_008438803.1	1.1e-132	96.67	PREDICTED: uncharacterized protein LOC103483796 [Cucumis melo] >KAA0049441.1 F-b...	[more]
XP_038893805.1	7.8e-126	92.37	uncharacterized protein LOC120082593 [Benincasa hispida]	[more]
XP_022979915.1	1.8e-109	83.26	uncharacterized protein LOC111479465 isoform X1 [Cucurbita maxima] >XP_023526476...	[more]
KAG6582240.1	1.8e-109	83.26	CASP-like protein 1D1, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of CSPI03G13930 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G15563.1	1.5e-29	41.45	unknown protein; Has 36 Blast hits to 36 proteins in 12 species: Archae - 0; Bac...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001810	F-box domain	PFAM	PF00646	F-box	coord: 3..44 e-value: 1.4E-5 score: 24.8
None	No IPR available	GENE3D	1.20.1280.50		coord: 2..83 e-value: 5.4E-8 score: 34.7
None	No IPR available	PANTHER	PTHR16008:SF4	F-BOX ONLY PROTEIN 4	coord: 2..239
IPR039588	F-box only protein 4	PANTHER	PTHR16008	F-BOX ONLY PROTEIN 4	coord: 2..239
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 3..80

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G13930.1	CSPI03G13930.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000209	protein polyubiquitination
biological_process	GO:0031146	SCF-dependent proteasomal ubiquitin-dependent protein catabolic process
cellular_component	GO:0019005	SCF ubiquitin ligase complex
molecular_function	GO:0005515	protein binding