CSPI03G13410 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI03G13410
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	outer envelope membrane protein 7
Location	Chr3: 10136333 .. 10136671 (-)
RNA-Seq Expression	CSPI03G13410
Synteny	CSPI03G13410

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGGAAACGGCGAAGTTGAACGCGGCGAGGTCTGGCTTGGTGGTGATCGGAGCTTTGGCCTTCGGATACCTGAGCTTACAGCTCGTGTTCAAGCCCTACCTCGAGAAAGCTCAAAGTTCTCTTCAACATCCCGAGCCTGAGCCCTCTACAATTCCAAAAGATGCCATTTCAAACCTCGACGGTTAAGCTCAATCTTCGTTGTTTTGCCTTGGTATGTATAAATGTAGGTAATTCAGAATGACGCTTTCGAGATTACCTTGAAATTTCTCAGTTTCAAGAGATTTTGGGAAACAGGAGAAGGATGCATTGCTATTGATTGAAGAAGATTACATATAG

mRNA sequence

ATGAAGGAAACGGCGAAGTTGAACGCGGCGAGGTCTGGCTTGGTGGTGATCGGAGCTTTGGCCTTCGGATACCTGAGCTTACAGCTCGTGTTCAAGCCCTACCTCGAGAAAGCTCAAAGTTCTCTTCAACATCCCGAGCCTGAGCCCTCTACAATTCCAAAAGATGCCATTTCAAACCTCGACGTTTCAAGAGATTTTGGGAAACAGGAGAAGGATGCATTGCTATTGATTGAAGAAGATTACATATAG

Coding sequence (CDS)

ATGAAGGAAACGGCGAAGTTGAACGCGGCGAGGTCTGGCTTGGTGGTGATCGGAGCTTTGGCCTTCGGATACCTGAGCTTACAGCTCGTGTTCAAGCCCTACCTCGAGAAAGCTCAAAGTTCTCTTCAACATCCCGAGCCTGAGCCCTCTACAATTCCAAAAGATGCCATTTCAAACCTCGACGTTTCAAGAGATTTTGGGAAACAGGAGAAGGATGCATTGCTATTGATTGAAGAAGATTACATATAG

Protein sequence

MKETAKLNAARSGLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHPEPEPSTIPKDAISNLDVSRDFGKQEKDALLLIEEDYI*

Homology

[Close]

BLAST of CSPI03G13410 vs. ExPASy TrEMBL
Match: A0A0A0L5N1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G149930 PE=4 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 3.6e-36
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0


Query: 1  MKETAKLNAARSGLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHPEPEPSTIPKDAISNL 60
          MKETAKLNAARSGLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHPEPEPSTIPKDAISNL
Sbjct: 1  MKETAKLNAARSGLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHPEPEPSTIPKDAISNL 60

Query: 61 DVSRDFGKQEKDALLLIEEDYI 83
          DVSRDFGKQEKDALLLIEEDYI
Sbjct: 61 DVSRDFGKQEKDALLLIEEDYI 82

[Close]

BLAST of CSPI03G13410 vs. ExPASy TrEMBL
Match: A0A5A7U4W2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G00160 PE=4 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 3.1e-27
Identity = 68/79 (86.08%), Postives = 72/79 (91.14%), Query Frame = 0


Query: 1  MKETAKLNAARSGLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHPEPEPSTIPKDAISNL 60
          MKETAKLNAARSGLVVIGALAFGYLSLQ+ FKPYLEKAQS LQHPEPEPSTI KDA+SN 
Sbjct: 1  MKETAKLNAARSGLVVIGALAFGYLSLQVGFKPYLEKAQSYLQHPEPEPSTILKDAVSNP 60

Query: 61 DVSRDFGKQEKDALLLIEE 80
          DVSRD GK +KD LLLIE+
Sbjct: 61 DVSRDVGKLKKDRLLLIED 79

[Close]

BLAST of CSPI03G13410 vs. ExPASy TrEMBL
Match: A0A4D9A3A6 (Uncharacterized protein OS=Salvia splendens OX=180675 GN=Saspl_033849 PE=4 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 8.5e-09
Identity = 37/59 (62.71%), Postives = 42/59 (71.19%), Query Frame = 0


Query: 1  MKETAKLNAARSGLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHPEPEPSTIPKDAISN 60
          M+ TAK NA RSGLVVIGALAFGYL+L L FKPYLEKAQ   QH     S+ P D  ++
Sbjct: 1  MRGTAKANAMRSGLVVIGALAFGYLTLHLGFKPYLEKAQLEQQHQSAAASSQPVDTFAD 59

[Close]

BLAST of CSPI03G13410 vs. ExPASy TrEMBL
Match: W9R337 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_007349 PE=4 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 5.5e-08
Identity = 30/51 (58.82%), Postives = 43/51 (84.31%), Query Frame = 0


Query: 1  MKETAKLNAARSGLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHPEPEPST 52
          M++  K+NA RSG+VV+GA+AFGYL+L L FKP+LEKAQ S++H + +PS+
Sbjct: 1  MRDRRKMNAMRSGVVVVGAMAFGYLTLYLGFKPFLEKAQLSVEHSQSQPSS 51

[Close]

BLAST of CSPI03G13410 vs. ExPASy TrEMBL
Match: M5XQA6 (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G152900 PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 1.6e-07
Identity = 33/66 (50.00%), Postives = 46/66 (69.70%), Query Frame = 0


Query: 1  MKETAKLNAARSGLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHPEPEPSTIPKDAISNL 60
          M+E  K+NA RSG+VV+GALAFGYL+LQL F+P+LE+AQ ++   EP  S+  +    N 
Sbjct: 1  MRERTKVNAMRSGVVVLGALAFGYLTLQLGFRPFLERAQLAVDESEPPSSSSSEQQQLNS 60

Query: 61 DVSRDF 67
            +R F
Sbjct: 61 SSTRHF 66

[Close]

BLAST of CSPI03G13410 vs. NCBI nr
Match: KGN57013.1 (hypothetical protein Csa_010432 [Cucumis sativus])

HSP 1 Score: 160.2 bits (404), Expect = 7.5e-36
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0


Query: 1  MKETAKLNAARSGLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHPEPEPSTIPKDAISNL 60
          MKETAKLNAARSGLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHPEPEPSTIPKDAISNL
Sbjct: 1  MKETAKLNAARSGLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHPEPEPSTIPKDAISNL 60

Query: 61 DVSRDFGKQEKDALLLIEEDYI 83
          DVSRDFGKQEKDALLLIEEDYI
Sbjct: 61 DVSRDFGKQEKDALLLIEEDYI 82

[Close]

BLAST of CSPI03G13410 vs. NCBI nr
Match: KAA0049387.1 (hypothetical protein E6C27_scaffold171G006320 [Cucumis melo var. makuwa] >TYK17172.1 hypothetical protein E5676_scaffold434G00160 [Cucumis melo var. makuwa])

HSP 1 Score: 130.6 bits (327), Expect = 6.4e-27
Identity = 68/79 (86.08%), Postives = 72/79 (91.14%), Query Frame = 0


Query: 1  MKETAKLNAARSGLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHPEPEPSTIPKDAISNL 60
          MKETAKLNAARSGLVVIGALAFGYLSLQ+ FKPYLEKAQS LQHPEPEPSTI KDA+SN 
Sbjct: 1  MKETAKLNAARSGLVVIGALAFGYLSLQVGFKPYLEKAQSYLQHPEPEPSTILKDAVSNP 60

Query: 61 DVSRDFGKQEKDALLLIEE 80
          DVSRD GK +KD LLLIE+
Sbjct: 61 DVSRDVGKLKKDRLLLIED 79

[Close]

BLAST of CSPI03G13410 vs. NCBI nr
Match: KAG7018683.1 (hypothetical protein SDJN02_20554, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 106.3 bits (264), Expect = 1.3e-19
Identity = 54/61 (88.52%), Postives = 56/61 (91.80%), Query Frame = 0


Query: 1  MKETAKLNAARSGLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHPEPEPSTIPKDAISNL 60
          MKE AKLNA RSG+VVIGALAFGYLSL LVFKPYLEKAQSSLQHP+ EPSTIPKDAISN 
Sbjct: 34 MKEAAKLNAVRSGVVVIGALAFGYLSLHLVFKPYLEKAQSSLQHPDSEPSTIPKDAISNR 93

Query: 61 D 62
          D
Sbjct: 94 D 94

[Close]

BLAST of CSPI03G13410 vs. NCBI nr
Match: KAG6582279.1 (hypothetical protein SDJN03_22281, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 104.0 bits (258), Expect = 6.4e-19
Identity = 53/61 (86.89%), Postives = 54/61 (88.52%), Query Frame = 0


Query: 1  MKETAKLNAARSGLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHPEPEPSTIPKDAISNL 60
          MKE AKLNA RSG+VVIGALAFGYLSL LVFKPYLEKAQ SLQHP  EPSTIPKDAISN 
Sbjct: 11 MKEAAKLNAVRSGVVVIGALAFGYLSLHLVFKPYLEKAQGSLQHPNSEPSTIPKDAISNR 70

Query: 61 D 62
          D
Sbjct: 71 D 71

[Close]

BLAST of CSPI03G13410 vs. NCBI nr
Match: KAF3457191.1 (hypothetical protein FNV43_RR01848 [Rhamnella rubrinervis])

HSP 1 Score: 72.0 bits (175), Expect = 2.7e-09
Identity = 34/50 (68.00%), Postives = 42/50 (84.00%), Query Frame = 0


Query: 1  MKETAKLNAARSGLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHPEPEPS 51
          M++  K+NA RSG+VV+GALAFGYL+LQL FKP+LEKAQ S+ H EP PS
Sbjct: 1  MRDRTKVNAMRSGVVVVGALAFGYLTLQLGFKPFLEKAQVSIDHSEPTPS 50

[Close]

BLAST of CSPI03G13410 vs. TAIR 10
Match: AT5G19151.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 53.9 bits (128), Expect = 7.1e-08
Identity = 30/55 (54.55%), Postives = 38/55 (69.09%), Query Frame = 0


Query: 1  MKETAKLNAARSGLVVIGALAFGYLSLQLVFKPYLEKA-------QSSLQHPEPE 49
          MK T   NA RS +VV+G+LAFGYLSL+L +KP+LEKA       QSS QH + +
Sbjct: 1  MKRTVMDNAIRSSVVVLGSLAFGYLSLELGYKPFLEKAEQYERSLQSSQQHQQQD 55

[Close]

BLAST of CSPI03G13410 vs. TAIR 10
Match: AT3G52420.1 (outer envelope membrane protein 7 )

HSP 1 Score: 41.2 bits (95), Expect = 4.8e-04
Identity = 18/60 (30.00%), Postives = 35/60 (58.33%), Query Frame = 0


Query: 6  KLNAARSGLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHPEPEPSTIPKDAISNLDVSRD 65
          K + A+   VV+ A+A G+L++++ FKP+L+K +SS+   +P       D  +    S++
Sbjct: 3  KTSGAKQATVVVAAMALGWLAIEIAFKPFLDKFRSSIDKSDPTKDPDDFDTAATATTSKE 62

The following BLAST results are available for this feature:

BLAST of CSPI03G13410 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI03G13410 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L5N1	3.6e-36	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G149930 PE=4 SV=1	[more]
A0A5A7U4W2	3.1e-27	86.08	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A4D9A3A6	8.5e-09	62.71	Uncharacterized protein OS=Salvia splendens OX=180675 GN=Saspl_033849 PE=4 SV=1	[more]
W9R337	5.5e-08	58.82	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_007349 PE=4 SV=1	[more]
M5XQA6	1.6e-07	50.00	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G152900 PE=4 SV=1	[more]

BLAST of CSPI03G13410 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN57013.1	7.5e-36	100.00	hypothetical protein Csa_010432 [Cucumis sativus]	[more]
KAA0049387.1	6.4e-27	86.08	hypothetical protein E6C27_scaffold171G006320 [Cucumis melo var. makuwa] >TYK171...	[more]
KAG7018683.1	1.3e-19	88.52	hypothetical protein SDJN02_20554, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6582279.1	6.4e-19	86.89	hypothetical protein SDJN03_22281, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAF3457191.1	2.7e-09	68.00	hypothetical protein FNV43_RR01848 [Rhamnella rubrinervis]	[more]

BLAST of CSPI03G13410 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G19151.1	7.1e-08	54.55	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G52420.1	4.8e-04	30.00	outer envelope membrane protein 7	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR038944	Outer envelope membrane protein 7-like	PANTHER	PTHR33982	OUTER ENVELOPE MEMBRANE PROTEIN 7-RELATED	coord: 1..57
None	No IPR available	PANTHER	PTHR33982:SF4	OS05G0532800 PROTEIN	coord: 1..57

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G13410.1	CSPI03G13410.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane