CSPI03G13310 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI03G13310
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr3: 10062805 .. 10063088 (-)
RNA-Seq ExpressionCSPI03G13310
SyntenyCSPI03G13310
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAATTTGAAGCGGGCCTACAATGGATGATCCGAGAAGACTATGGAACGGATTGGGCCTCGGAGGCCCATGAGAAAGCAAGGGATAGGCAACATCGTGGGGAACCCACATGGTGTGGAAAGCGACTGAGAGTCAAGGCCGGAAAAACAGTAGATTTGAAAAAAGAGAGAGGGTGTGAAAGTGAAGCACAAGCAGTGTAATTGGTAATTGGCAATTGGCATGTGAGATGTCGCATAGTCTTAAATGGGACGTCGTTTTAATCGACATGTCGGGTGGAAGATAG

mRNA sequence

ATGGAATTTGAAGCGGGCCTACAATGGATGATCCGAGAAGACTATGGAACGGATTGGGCCTCGGAGGCCCATGAGAAAGCAAGGGATAGGCAACATCGTGGGGAACCCACATGGTGTGGAAAGCGACTGAGAGTCAAGGCCGGAAAAACAATGTCGCATAGTCTTAAATGGGACGTCGTTTTAATCGACATGTCGGGTGGAAGATAG

Coding sequence (CDS)

ATGGAATTTGAAGCGGGCCTACAATGGATGATCCGAGAAGACTATGGAACGGATTGGGCCTCGGAGGCCCATGAGAAAGCAAGGGATAGGCAACATCGTGGGGAACCCACATGGTGTGGAAAGCGACTGAGAGTCAAGGCCGGAAAAACAATGTCGCATAGTCTTAAATGGGACGTCGTTTTAATCGACATGTCGGGTGGAAGATAG

Protein sequence

MEFEAGLQWMIREDYGTDWASEAHEKARDRQHRGEPTWCGKRLRVKAGKTMSHSLKWDVVLIDMSGGR*
Homology
[Close]
BLAST of CSPI03G13310 vs. ExPASy TrEMBL
Match: A0A0A0L5M5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G149340 PE=4 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 5.4e-33
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0 

Query: 1  MEFEAGLQWMIREDYGTDWASEAHEKARDRQHRGEPTWCGKRLRVKAGKTMSHSLKWDVV 60
          MEFEAGLQWMIREDYGTDWASEAHEKARDRQHRGEPTWCGKRLRVKAGKTMSHSLKWDVV
Sbjct: 1  MEFEAGLQWMIREDYGTDWASEAHEKARDRQHRGEPTWCGKRLRVKAGKTMSHSLKWDVV 60

Query: 61 LIDMSGGR 69
          LIDMSGGR
Sbjct: 61 LIDMSGGR 68

[Close]
BLAST of CSPI03G13310 vs. NCBI nr
Match: KGN57003.1 (hypothetical protein Csa_009706 [Cucumis sativus])

HSP 1 Score: 149.4 bits (376), Expect = 1.1e-32
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0 

Query: 1  MEFEAGLQWMIREDYGTDWASEAHEKARDRQHRGEPTWCGKRLRVKAGKTMSHSLKWDVV 60
          MEFEAGLQWMIREDYGTDWASEAHEKARDRQHRGEPTWCGKRLRVKAGKTMSHSLKWDVV
Sbjct: 1  MEFEAGLQWMIREDYGTDWASEAHEKARDRQHRGEPTWCGKRLRVKAGKTMSHSLKWDVV 60

Query: 61 LIDMSGGR 69
          LIDMSGGR
Sbjct: 61 LIDMSGGR 68

The following BLAST results are available for this feature:
BLAST of CSPI03G13310 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI03G13310 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L5M55.4e-33100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G149340 PE=4 SV=1[more]
BLAST of CSPI03G13310 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN57003.11.1e-32100.00hypothetical protein Csa_009706 [Cucumis sativus][more]
BLAST of CSPI03G13310 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI03G13310.1CSPI03G13310.1mRNA