CSPI03G13140 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI03G13140
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr3: 9952675 .. 9953003 (+)
RNA-Seq ExpressionCSPI03G13140
SyntenyCSPI03G13140
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGATATCTGAGGCTTGGATGAGTCGTTTGCAGTGGTCTCCAATGACCTATCCTTTCATTCTCACTTCCAAGGCTTACCTTAGGCAATGCTTTTGTGCAAAAGCTGCAGGACTCGAACAAATTGAGGGGCTAGTAAAAGCAAACCATCTTCCCAAGAACATGAAGCCACATAAAATCTAAGAAGTATTTATATGCCTAGGTTAAGAAAAACAACACAACCTGTAACGAATGAATCAACTCATTGAAGCATAGCATCAAACAGATGGTCTGCATTAAACGAATGAATCGAAAGGCATTGCAAAACCTATTTTCAGTCGGAGCCGCAA

mRNA sequence

ATGGGGATATCTGAGGCTTGGATGAGTCGTTTGCAGTGGTCTCCAATGACCTATCCTTTCATTCTCACTTCCAAGGCTTACCTTAGGCAATGCTTTTGTGCAAAAGCTGCAGGACTCGAACAAATTGAGGGGCTAGTAAAAGCAAACCATCTTCCCAAGAACATGAAGCCACATAAAATCTAAGAAGTATTTATATGCCTAGGTTAAGAAAAACAACACAACCTGTAACGAATGAATCAACTCATTGAAGCATAGCATCAAACAGATGGTCTGCATTAAACGAATGAATCGAAAGGCATTGCAAAACCTATTTTCAGTCGGAGCCGCAA

Coding sequence (CDS)

ATGGGGATATCTGAGGCTTGGATGAGTCGTTTGCAGTGGTCTCCAATGACCTATCCTTTCATTCTCACTTCCAAGGCTTACCTTAGGCAATGCTTTTGTGCAAAAGCTGCAGGACTCGAACAAATTGAGGGGCTAGTAAAAGCAAACCATCTTCCCAAGAACATGAAGCCACATAAAATCTAA

Protein sequence

MGISEAWMSRLQWSPMTYPFILTSKAYLRQCFCAKAAGLEQIEGLVKANHLPKNMKPHKI*
Homology
[Close]
BLAST of CSPI03G13140 vs. ExPASy TrEMBL
Match: A0A0A0L7J7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G146690 PE=4 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.6e-17
Identity = 45/45 (100.00%), Postives = 45/45 (100.00%), Query Frame = 0 

Query: 1  MGISEAWMSRLQWSPMTYPFILTSKAYLRQCFCAKAAGLEQIEGL 46
          MGISEAWMSRLQWSPMTYPFILTSKAYLRQCFCAKAAGLEQIEGL
Sbjct: 1  MGISEAWMSRLQWSPMTYPFILTSKAYLRQCFCAKAAGLEQIEGL 45

[Close]
BLAST of CSPI03G13140 vs. NCBI nr
Match: KGN56984.1 (hypothetical protein Csa_010863 [Cucumis sativus])

HSP 1 Score: 97.8 bits (242), Expect = 3.4e-17
Identity = 45/45 (100.00%), Postives = 45/45 (100.00%), Query Frame = 0 

Query: 1  MGISEAWMSRLQWSPMTYPFILTSKAYLRQCFCAKAAGLEQIEGL 46
          MGISEAWMSRLQWSPMTYPFILTSKAYLRQCFCAKAAGLEQIEGL
Sbjct: 1  MGISEAWMSRLQWSPMTYPFILTSKAYLRQCFCAKAAGLEQIEGL 45

The following BLAST results are available for this feature:
BLAST of CSPI03G13140 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI03G13140 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L7J71.6e-17100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G146690 PE=4 SV=1[more]
BLAST of CSPI03G13140 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN56984.13.4e-17100.00hypothetical protein Csa_010863 [Cucumis sativus][more]
BLAST of CSPI03G13140 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI03G13140.1CSPI03G13140.1mRNA