CSPI03G13130 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI03G13130
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	preprotein translocase subunit SECE1
Location	Chr3: 9951753 .. 9952518 (+)
RNA-Seq Expression	CSPI03G13130
Synteny	CSPI03G13130

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTACTGTCAAGTTCAACCGATTTATCCAATCTGATTCTCCACCGCTCACCGACAGGGAAAATGGCCGTTCCGATTTCCCTGAAATTTCCGACGGTTCCATCCACTTTAACCAACAGAACCGCCTCCTTGTTCGTACCACTGCGACGGAGCTCCCCTCATCATTCTTATCCTCACTCACAACATACGATCAGATTCCCAACGATTAGATCCAACAGAAACGTTAAGTTCTCCGCCGTCAATGCTGTGCAGGAAAGCCAAGAGAATACAGAATCCGACGGTGTGGAGGTTCAAGCAGGGCCACCAACGGAGGAGCCGAAAACGGCCGACCAATCAGCAGAATCCGGCGCGAATTTGGGCGCCGAAATTCAGGAGGCTTTGAAGCAGCAAAAGGTGGAGAAAGAAGGGGACCTGATCGGCGGAGTGGCGGAGGAGATTAAAGAGATTGAATGGCCGGCGTTTCGAAAGGTTTTGGGCACGACGGGGGTAGTGATCGGCGTTATTGCTGGCTCTAGTGTCGTTCTGCTCACTGTGAATGCCTTATTGGCAGAGCTGTCCGATCGAGTTTTCGCCGGAAAAGGAGTTCAAGATTTCTTTAGTTGAAAGTTCGATTTTTTTTCTTGAGATGTAAACTTTGTAACTGAAATTCATTGGCTTCTACGGAAGAAACTGGATTGTAATTTGTGTTAAGAAGGAAGAATCCGTTGCAGCATAATCAAACTAAGTGAAATTTGAAGAGTATTTTAAAACTTAAAACTTCCTATTGAAC

mRNA sequence

CTACTGTCAAGTTCAACCGATTTATCCAATCTGATTCTCCACCGCTCACCGACAGGGAAAATGGCCGTTCCGATTTCCCTGAAATTTCCGACGGTTCCATCCACTTTAACCAACAGAACCGCCTCCTTGTTCGTACCACTGCGACGGAGCTCCCCTCATCATTCTTATCCTCACTCACAACATACGATCAGATTCCCAACGATTAGATCCAACAGAAACGTTAAGTTCTCCGCCGTCAATGCTGTGCAGGAAAGCCAAGAGAATACAGAATCCGACGGTGTGGAGGTTCAAGCAGGGCCACCAACGGAGGAGCCGAAAACGGCCGACCAATCAGCAGAATCCGGCGCGAATTTGGGCGCCGAAATTCAGGAGGCTTTGAAGCAGCAAAAGGTGGAGAAAGAAGGGGACCTGATCGGCGGAGTGGCGGAGGAGATTAAAGAGATTGAATGGCCGGCGTTTCGAAAGGTTTTGGGCACGACGGGGGTAGTGATCGGCGTTATTGCTGGCTCTAGTGTCGTTCTGCTCACTGTGAATGCCTTATTGGCAGAGCTGTCCGATCGAGTTTTCGCCGGAAAAGGAGTTCAAGATTTCTTTAGTTGAAAGTTCGATTTTTTTTCTTGAGATGTAAACTTTGTAACTGAAATTCATTGGCTTCTACGGAAGAAACTGGATTGTAATTTGTGTTAAGAAGGAAGAATCCGTTGCAGCATAATCAAACTAAGTGAAATTTGAAGAGTATTTTAAAACTTAAAACTTCCTATTGAAC

Coding sequence (CDS)

ATGGCCGTTCCGATTTCCCTGAAATTTCCGACGGTTCCATCCACTTTAACCAACAGAACCGCCTCCTTGTTCGTACCACTGCGACGGAGCTCCCCTCATCATTCTTATCCTCACTCACAACATACGATCAGATTCCCAACGATTAGATCCAACAGAAACGTTAAGTTCTCCGCCGTCAATGCTGTGCAGGAAAGCCAAGAGAATACAGAATCCGACGGTGTGGAGGTTCAAGCAGGGCCACCAACGGAGGAGCCGAAAACGGCCGACCAATCAGCAGAATCCGGCGCGAATTTGGGCGCCGAAATTCAGGAGGCTTTGAAGCAGCAAAAGGTGGAGAAAGAAGGGGACCTGATCGGCGGAGTGGCGGAGGAGATTAAAGAGATTGAATGGCCGGCGTTTCGAAAGGTTTTGGGCACGACGGGGGTAGTGATCGGCGTTATTGCTGGCTCTAGTGTCGTTCTGCTCACTGTGAATGCCTTATTGGCAGAGCTGTCCGATCGAGTTTTCGCCGGAAAAGGAGTTCAAGATTTCTTTAGTTGA

Protein sequence

MAVPISLKFPTVPSTLTNRTASLFVPLRRSSPHHSYPHSQHTIRFPTIRSNRNVKFSAVNAVQESQENTESDGVEVQAGPPTEEPKTADQSAESGANLGAEIQEALKQQKVEKEGDLIGGVAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS*

Homology

[Close]

BLAST of CSPI03G13130 vs. ExPASy Swiss-Prot
Match: O23342 (Preprotein translocase subunit SECE1 OS=Arabidopsis thaliana OX=3702 GN=SECE1 PE=1 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 2.5e-26
Identity = 71/141 (50.35%), Postives = 93/141 (65.96%), Query Frame = 0


Query: 43  IRFPTIRSNRNVKFSAVNAVQESQENTESDGVEVQAGPPTEEPKTADQSAESGANLGAEI 102
           IR  T  + R        A+++ ++   S+        P EE  + +      + +GAEI
Sbjct: 37  IRTMTTSNLRKSACFVAKAIEQRRDTAGSESESEATPSPAEESGSGEDKEVEISAIGAEI 96

Query: 103 QEALKQQKVEKE----GDLIGGVAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVN 162
           + A++Q+K  +E     + + GVAEE+KEIEWPAF+KVLGTTGVV+GVIAGSSVVLLTVN
Sbjct: 97  KAAMEQRKTAEEEKGKNEFLSGVAEEVKEIEWPAFQKVLGTTGVVLGVIAGSSVVLLTVN 156

Query: 163 ALLAELSDRVFAGKGVQDFFS 180
            LLAELSDRVF G+GVQDFFS
Sbjct: 157 FLLAELSDRVFIGRGVQDFFS 177

[Close]

BLAST of CSPI03G13130 vs. ExPASy TrEMBL
Match: A0A0A0L5J0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G146680 PE=4 SV=1)

HSP 1 Score: 334.7 bits (857), Expect = 2.3e-88
Identity = 178/179 (99.44%), Postives = 179/179 (100.00%), Query Frame = 0


Query: 1   MAVPISLKFPTVPSTLTNRTASLFVPLRRSSPHHSYPHSQHTIRFPTIRSNRNVKFSAVN 60
           MAVPISLKFPTVPSTLTNRTASLFVPLRRSSPHHS+PHSQHTIRFPTIRSNRNVKFSAVN
Sbjct: 1   MAVPISLKFPTVPSTLTNRTASLFVPLRRSSPHHSHPHSQHTIRFPTIRSNRNVKFSAVN 60

Query: 61  AVQESQENTESDGVEVQAGPPTEEPKTADQSAESGANLGAEIQEALKQQKVEKEGDLIGG 120
           AVQESQENTESDGVEVQAGPPTEEPKTADQSAESGANLGAEIQEALKQQKVEKEGDLIGG
Sbjct: 61  AVQESQENTESDGVEVQAGPPTEEPKTADQSAESGANLGAEIQEALKQQKVEKEGDLIGG 120

Query: 121 VAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS 180
           VAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS
Sbjct: 121 VAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS 179

[Close]

BLAST of CSPI03G13130 vs. ExPASy TrEMBL
Match: A0A1S3AWM4 (preprotein translocase subunit SECE1 OS=Cucumis melo OX=3656 GN=LOC103483711 PE=4 SV=1)

HSP 1 Score: 321.2 bits (822), Expect = 2.7e-84
Identity = 173/180 (96.11%), Postives = 177/180 (98.33%), Query Frame = 0


Query: 1   MAVPISLKFPTVPSTLTNRTASLFVP-LRRSSPHHSYPHSQHTIRFPTIRSNRNVKFSAV 60
           MAVPISLKFPTVPSTLTNRTASLFVP LR+SS HHS+PHSQHTIR PTIRSNRN+KFSAV
Sbjct: 1   MAVPISLKFPTVPSTLTNRTASLFVPLLRQSSTHHSHPHSQHTIRLPTIRSNRNIKFSAV 60

Query: 61  NAVQESQENTESDGVEVQAGPPTEEPKTADQSAESGANLGAEIQEALKQQKVEKEGDLIG 120
           NAVQESQENTESDGVEVQAGPPTEEPKTADQSAESGANLGAEIQEALKQ+KVEKEGDLIG
Sbjct: 61  NAVQESQENTESDGVEVQAGPPTEEPKTADQSAESGANLGAEIQEALKQRKVEKEGDLIG 120

Query: 121 GVAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS 180
           GVAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS
Sbjct: 121 GVAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS 180

[Close]

BLAST of CSPI03G13130 vs. ExPASy TrEMBL
Match: A0A5D3D089 (Preprotein translocase subunit SECE1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G00410 PE=4 SV=1)

HSP 1 Score: 320.5 bits (820), Expect = 4.6e-84
Identity = 173/180 (96.11%), Postives = 176/180 (97.78%), Query Frame = 0


Query: 1   MAVPISLKFPTVPSTLTNRTASLFVP-LRRSSPHHSYPHSQHTIRFPTIRSNRNVKFSAV 60
           MAVPI LKFPTVPSTLTNRTASLFVP LRRSS HHS+PHSQHTIR PTIRSNRN+KFSAV
Sbjct: 1   MAVPIYLKFPTVPSTLTNRTASLFVPLLRRSSTHHSHPHSQHTIRLPTIRSNRNIKFSAV 60

Query: 61  NAVQESQENTESDGVEVQAGPPTEEPKTADQSAESGANLGAEIQEALKQQKVEKEGDLIG 120
           NAVQESQENTESDGVEVQAGPPTEEPKTADQSAESGANLGAEIQEALKQ+KVEKEGDLIG
Sbjct: 61  NAVQESQENTESDGVEVQAGPPTEEPKTADQSAESGANLGAEIQEALKQRKVEKEGDLIG 120

Query: 121 GVAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS 180
           GVAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS
Sbjct: 121 GVAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS 180

[Close]

BLAST of CSPI03G13130 vs. ExPASy TrEMBL
Match: A0A6J1IW64 (preprotein translocase subunit SECE1 OS=Cucurbita maxima OX=3661 GN=LOC111479153 PE=4 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 1.7e-75
Identity = 158/179 (88.27%), Postives = 165/179 (92.18%), Query Frame = 0


Query: 1   MAVPISLKFPTVPSTLTNRTASLFVPLRRSSPHHSYPHSQHTIRFPTIRSNRNVKFSAVN 60
           MAVPISL+FP VPSTLT+R ASLFV LRRSS H S+PHS  TIR P +RS RN KFSAVN
Sbjct: 1   MAVPISLRFPAVPSTLTDRAASLFVSLRRSSSHRSHPHSHRTIRLPGVRSRRNSKFSAVN 60

Query: 61  AVQESQENTESDGVEVQAGPPTEEPKTADQSAESGANLGAEIQEALKQQKVEKEGDLIGG 120
           AVQESQENTESDGVEVQAGPPTEE KTADQ AESG NLGAEIQEALKQ+KVEKEGDLIGG
Sbjct: 61  AVQESQENTESDGVEVQAGPPTEESKTADQPAESGENLGAEIQEALKQRKVEKEGDLIGG 120

Query: 121 VAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS 180
           VAEEI++IEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS
Sbjct: 121 VAEEIQKIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS 179

[Close]

BLAST of CSPI03G13130 vs. ExPASy TrEMBL
Match: A0A6J1GWU8 (preprotein translocase subunit SECE1 OS=Cucurbita moschata OX=3662 GN=LOC111457882 PE=4 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 1.9e-74
Identity = 157/179 (87.71%), Postives = 163/179 (91.06%), Query Frame = 0


Query: 1   MAVPISLKFPTVPSTLTNRTASLFVPLRRSSPHHSYPHSQHTIRFPTIRSNRNVKFSAVN 60
           MAVPISL+FPTVPST TNR ASLFV LRRSS +HS+PH   TIR P IRS RN  FSAVN
Sbjct: 1   MAVPISLRFPTVPSTFTNRAASLFVSLRRSSAYHSHPHLHRTIRLPGIRSRRNSMFSAVN 60

Query: 61  AVQESQENTESDGVEVQAGPPTEEPKTADQSAESGANLGAEIQEALKQQKVEKEGDLIGG 120
           AVQESQENTESDGVEVQAGPP EE KTADQ AESG NLGAEIQEALKQ+KVEKEGDLIGG
Sbjct: 61  AVQESQENTESDGVEVQAGPPREESKTADQPAESGENLGAEIQEALKQRKVEKEGDLIGG 120

Query: 121 VAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS 180
           VAEEI++IEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS
Sbjct: 121 VAEEIQKIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS 179

[Close]

BLAST of CSPI03G13130 vs. NCBI nr
Match: XP_004134136.1 (preprotein translocase subunit SECE1 [Cucumis sativus] >KGN56983.1 hypothetical protein Csa_011409 [Cucumis sativus])

HSP 1 Score: 334.7 bits (857), Expect = 4.8e-88
Identity = 178/179 (99.44%), Postives = 179/179 (100.00%), Query Frame = 0


Query: 1   MAVPISLKFPTVPSTLTNRTASLFVPLRRSSPHHSYPHSQHTIRFPTIRSNRNVKFSAVN 60
           MAVPISLKFPTVPSTLTNRTASLFVPLRRSSPHHS+PHSQHTIRFPTIRSNRNVKFSAVN
Sbjct: 1   MAVPISLKFPTVPSTLTNRTASLFVPLRRSSPHHSHPHSQHTIRFPTIRSNRNVKFSAVN 60

Query: 61  AVQESQENTESDGVEVQAGPPTEEPKTADQSAESGANLGAEIQEALKQQKVEKEGDLIGG 120
           AVQESQENTESDGVEVQAGPPTEEPKTADQSAESGANLGAEIQEALKQQKVEKEGDLIGG
Sbjct: 61  AVQESQENTESDGVEVQAGPPTEEPKTADQSAESGANLGAEIQEALKQQKVEKEGDLIGG 120

Query: 121 VAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS 180
           VAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS
Sbjct: 121 VAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS 179

[Close]

BLAST of CSPI03G13130 vs. NCBI nr
Match: XP_008438678.1 (PREDICTED: preprotein translocase subunit SECE1 [Cucumis melo])

HSP 1 Score: 321.2 bits (822), Expect = 5.5e-84
Identity = 173/180 (96.11%), Postives = 177/180 (98.33%), Query Frame = 0


Query: 1   MAVPISLKFPTVPSTLTNRTASLFVP-LRRSSPHHSYPHSQHTIRFPTIRSNRNVKFSAV 60
           MAVPISLKFPTVPSTLTNRTASLFVP LR+SS HHS+PHSQHTIR PTIRSNRN+KFSAV
Sbjct: 1   MAVPISLKFPTVPSTLTNRTASLFVPLLRQSSTHHSHPHSQHTIRLPTIRSNRNIKFSAV 60

Query: 61  NAVQESQENTESDGVEVQAGPPTEEPKTADQSAESGANLGAEIQEALKQQKVEKEGDLIG 120
           NAVQESQENTESDGVEVQAGPPTEEPKTADQSAESGANLGAEIQEALKQ+KVEKEGDLIG
Sbjct: 61  NAVQESQENTESDGVEVQAGPPTEEPKTADQSAESGANLGAEIQEALKQRKVEKEGDLIG 120

Query: 121 GVAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS 180
           GVAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS
Sbjct: 121 GVAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS 180

[Close]

BLAST of CSPI03G13130 vs. NCBI nr
Match: KAA0049363.1 (preprotein translocase subunit SECE1 [Cucumis melo var. makuwa] >TYK17195.1 preprotein translocase subunit SECE1 [Cucumis melo var. makuwa])

HSP 1 Score: 320.5 bits (820), Expect = 9.4e-84
Identity = 173/180 (96.11%), Postives = 176/180 (97.78%), Query Frame = 0


Query: 1   MAVPISLKFPTVPSTLTNRTASLFVP-LRRSSPHHSYPHSQHTIRFPTIRSNRNVKFSAV 60
           MAVPI LKFPTVPSTLTNRTASLFVP LRRSS HHS+PHSQHTIR PTIRSNRN+KFSAV
Sbjct: 1   MAVPIYLKFPTVPSTLTNRTASLFVPLLRRSSTHHSHPHSQHTIRLPTIRSNRNIKFSAV 60

Query: 61  NAVQESQENTESDGVEVQAGPPTEEPKTADQSAESGANLGAEIQEALKQQKVEKEGDLIG 120
           NAVQESQENTESDGVEVQAGPPTEEPKTADQSAESGANLGAEIQEALKQ+KVEKEGDLIG
Sbjct: 61  NAVQESQENTESDGVEVQAGPPTEEPKTADQSAESGANLGAEIQEALKQRKVEKEGDLIG 120

Query: 121 GVAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS 180
           GVAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS
Sbjct: 121 GVAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS 180

[Close]

BLAST of CSPI03G13130 vs. NCBI nr
Match: XP_038896581.1 (preprotein translocase subunit SECE1 [Benincasa hispida])

HSP 1 Score: 308.1 bits (788), Expect = 4.9e-80
Identity = 165/179 (92.18%), Postives = 172/179 (96.09%), Query Frame = 0


Query: 1   MAVPISLKFPTVPSTLTNRTASLFVPLRRSSPHHSYPHSQHTIRFPTIRSNRNVKFSAVN 60
           MAVPISLKFPTVPSTLTNR+ASLF+ LRRSS HHS+PHSQHTIR PTIR  R + FSAVN
Sbjct: 1   MAVPISLKFPTVPSTLTNRSASLFLSLRRSSAHHSHPHSQHTIRLPTIRFIRKINFSAVN 60

Query: 61  AVQESQENTESDGVEVQAGPPTEEPKTADQSAESGANLGAEIQEALKQQKVEKEGDLIGG 120
           AVQESQENTES+GVEVQAGPPTEEPKTADQSAESGANLGAEIQEALKQ+KVEKEGDLIGG
Sbjct: 61  AVQESQENTESNGVEVQAGPPTEEPKTADQSAESGANLGAEIQEALKQRKVEKEGDLIGG 120

Query: 121 VAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS 180
           VAEEIKEIEWPAF+KVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS
Sbjct: 121 VAEEIKEIEWPAFQKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS 179

[Close]

BLAST of CSPI03G13130 vs. NCBI nr
Match: XP_022979428.1 (preprotein translocase subunit SECE1 [Cucurbita maxima])

HSP 1 Score: 292.0 bits (746), Expect = 3.6e-75
Identity = 158/179 (88.27%), Postives = 165/179 (92.18%), Query Frame = 0


Query: 1   MAVPISLKFPTVPSTLTNRTASLFVPLRRSSPHHSYPHSQHTIRFPTIRSNRNVKFSAVN 60
           MAVPISL+FP VPSTLT+R ASLFV LRRSS H S+PHS  TIR P +RS RN KFSAVN
Sbjct: 1   MAVPISLRFPAVPSTLTDRAASLFVSLRRSSSHRSHPHSHRTIRLPGVRSRRNSKFSAVN 60

Query: 61  AVQESQENTESDGVEVQAGPPTEEPKTADQSAESGANLGAEIQEALKQQKVEKEGDLIGG 120
           AVQESQENTESDGVEVQAGPPTEE KTADQ AESG NLGAEIQEALKQ+KVEKEGDLIGG
Sbjct: 61  AVQESQENTESDGVEVQAGPPTEESKTADQPAESGENLGAEIQEALKQRKVEKEGDLIGG 120

Query: 121 VAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS 180
           VAEEI++IEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS
Sbjct: 121 VAEEIQKIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS 179

[Close]

BLAST of CSPI03G13130 vs. TAIR 10
Match: AT4G14870.1 (secE/sec61-gamma protein transport protein )

HSP 1 Score: 120.2 bits (300), Expect = 1.7e-27
Identity = 71/141 (50.35%), Postives = 93/141 (65.96%), Query Frame = 0


Query: 43  IRFPTIRSNRNVKFSAVNAVQESQENTESDGVEVQAGPPTEEPKTADQSAESGANLGAEI 102
           IR  T  + R        A+++ ++   S+        P EE  + +      + +GAEI
Sbjct: 37  IRTMTTSNLRKSACFVAKAIEQRRDTAGSESESEATPSPAEESGSGEDKEVEISAIGAEI 96

Query: 103 QEALKQQKVEKE----GDLIGGVAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVN 162
           + A++Q+K  +E     + + GVAEE+KEIEWPAF+KVLGTTGVV+GVIAGSSVVLLTVN
Sbjct: 97  KAAMEQRKTAEEEKGKNEFLSGVAEEVKEIEWPAFQKVLGTTGVVLGVIAGSSVVLLTVN 156

Query: 163 ALLAELSDRVFAGKGVQDFFS 180
            LLAELSDRVF G+GVQDFFS
Sbjct: 157 FLLAELSDRVFIGRGVQDFFS 177

The following BLAST results are available for this feature:

BLAST of CSPI03G13130 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O23342	2.5e-26	50.35	Preprotein translocase subunit SECE1 OS=Arabidopsis thaliana OX=3702 GN=SECE1 PE...	[more]

BLAST of CSPI03G13130 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L5J0	2.3e-88	99.44	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G146680 PE=4 SV=1	[more]
A0A1S3AWM4	2.7e-84	96.11	preprotein translocase subunit SECE1 OS=Cucumis melo OX=3656 GN=LOC103483711 PE=...	[more]
A0A5D3D089	4.6e-84	96.11	Preprotein translocase subunit SECE1 OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A6J1IW64	1.7e-75	88.27	preprotein translocase subunit SECE1 OS=Cucurbita maxima OX=3661 GN=LOC111479153...	[more]
A0A6J1GWU8	1.9e-74	87.71	preprotein translocase subunit SECE1 OS=Cucurbita moschata OX=3662 GN=LOC1114578...	[more]

BLAST of CSPI03G13130 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004134136.1	4.8e-88	99.44	preprotein translocase subunit SECE1 [Cucumis sativus] >KGN56983.1 hypothetical ...	[more]
XP_008438678.1	5.5e-84	96.11	PREDICTED: preprotein translocase subunit SECE1 [Cucumis melo]	[more]
KAA0049363.1	9.4e-84	96.11	preprotein translocase subunit SECE1 [Cucumis melo var. makuwa] >TYK17195.1 prep...	[more]
XP_038896581.1	4.9e-80	92.18	preprotein translocase subunit SECE1 [Benincasa hispida]	[more]
XP_022979428.1	3.6e-75	88.27	preprotein translocase subunit SECE1 [Cucurbita maxima]	[more]

BLAST of CSPI03G13130 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G14870.1	1.7e-27	50.35	secE/sec61-gamma protein transport protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR038379	SecE superfamily	GENE3D	1.20.5.1030	Preprotein translocase secy subunit	coord: 115..166 e-value: 1.6E-5 score: 26.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 62..94
None	No IPR available	PANTHER	PTHR37240	PREPROTEIN TRANSLOCASE SUBUNIT SECE1	coord: 4..178

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G13130.1	CSPI03G13130.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009306	protein secretion
biological_process	GO:0071806	protein transmembrane transport
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0008320	protein transmembrane transporter activity