CSPI03G11230 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGGCTAACTTGAATGTGTCATTAAGATTTTCATCATTTTCCTAAAGAAAGTTCTGAAAAATCACGCGCCGCGTCTCTGCTAGTGGGTGTGCATCTACATTTTTCTCTTCCAGATGTTCAATATATAGAACATGTGTCAAATTAATGGAGCATATAATTCTCTCTTGATATGTTATACGAGAATATCTAGAAAGGAAAAGCACACTTGCGGTTCTTCTACCTAAATTTTTCACAACCATTTCTCTTAGTACCATCTACTACACATTTAGCACATAAAAATGAACAGTGAAAGTGCATTTCACTGAAGTAGTACGTCCTCATCATTGAGAACGTAAAAAGTCTAGAATTACCGTTCTTAGAAAAAAGAAGCTAGCTTCGAGACCATATAAAGCTTGAGCAACACTGCCATCATTTACACCAGAAAATTTGAGTTTCCATTGTTTCATGATCATGAAGATTCTCGTTAGCATTCTGATGCTCATTTTCTTCCCATTCTTCACTGTTTTCGTGTCACTGTTACCTGCAGAGCAACTGTTTGGCATAGAATACGAAGTCCGTGTGATCAATGGCTTCACAAACAACTCCTCACTTCCTCTAGTGATATGGTGCGCTTCCAAAGACGGTGATATTGGCGGGCGTGCGCTCCAGGAGCATGATGATTTCAGTTGGCCTGTCAAGACCAACTTCTGGATTACTACAACAACCTCTCAATTCTCATGCACTGTCAAATTGGACCGTACAAGGAAAAGTTTTGATGCATTCAAGGTACCAAGAGATATCTATCGCTGTAGTGCTCTCAGGAAATGCTCGTGGTTGGTTATGGAAGATGGGTTTTATTTCAGCGATGATGAAGTAAACTGGAAGAAGGATTTCTCGTGGTAAAGCACCAGACCAGCTAAGTTCTCTCTACTCTACTCTACTCTGTTCTACTTCTACTTCTACTTCTCTACTAGTTTTGCTTTTACTGTCTTGATCTTGGCCTTTCCAAAGCTAGATTCTGTAGTGTAGTTCAGGAAAGGAAGGCTATTTTGAATCATAAATATGAGTTTAGCGATGGAATTTGAATTCCCCGGTTATCTACCTAGTAAAAGTCGCCTTTTTTTTGTACCGTGTACCTTTTGAATTAATTAATAATAAATCTCTTTTTTAGGCG GGGCTAACTTGAATGTGTCATTAAGATTTTCATCATTTTCCTAAAGAAAGTTCTGAAAAATCACGCGCCGCGTCTCTGCTAGTGGGTGTGCATCTACATTTTTCTCTTCCAGATGTTCAATATATAGAACATGTGTCAAATTAATGGAGCATATAATTCTCTCTTGATATGTTATACGAGAATATCTAGAAAGGAAAAGCACACTTGCGGTTCTTCTACCTAAATTTTTCACAACCATTTCTCTTAGTACCATCTACTACACATTTAGCACATAAAAATGAACAGTGAAAGTGCATTTCACTGAAGTAGTACGTCCTCATCATTGAGAACGTAAAAAGTCTAGAATTACCGTTCTTAGAAAAAAGAAGCTAGCTTCGAGACCATATAAAGCTTGAGCAACACTGCCATCATTTACACCAGAAAATTTGAGTTTCCATTGTTTCATGATCATGAAGATTCTCGTTAGCATTCTGATGCTCATTTTCTTCCCATTCTTCACTGTTTTCGTGTCACTGTTACCTGCAGAGCAACTGTTTGGCATAGAATACGAAGTCCGTGTGATCAATGGCTTCACAAACAACTCCTCACTTCCTCTAGTGATATGGTGCGCTTCCAAAGACGGTGATATTGGCGGGCGTGCGCTCCAGGAGCATGATGATTTCAGTTGGCCTGTCAAGACCAACTTCTGGATTACTACAACAACCTCTCAATTCTCATGCACTGTCAAATTGGACCGTACAAGGAAAAGTTTTGATGCATTCAAGGTACCAAGAGATATCTATCGCTGTAGTGCTCTCAGGAAATGCTCGTGGTTGGTTATGGAAGATGGGTTTTATTTCAGCGATGATGAAGTAAACTGGAAGAAGGATTTCTCGTGGTAAAGCACCAGACCAGCTAAGTTCTCTCTACTCTACTCTACTCTGTTCTACTTCTACTTCTACTTCTCTACTAGTTTTGCTTTTACTGTCTTGATCTTGGCCTTTCCAAAGCTAGATTCTGTAGTGTAGTTCAGGAAAGGAAGGCTATTTTGAATCATAAATATGAGTTTAGCGATGGAATTTGAATTCCCCGGTTATCTACCTAGTAAAAGTCGCCTTTTTTTTGTACCGTGTACCTTTTGAATTAATTAATAATAAATCTCTTTTTTAGGCG ATGATCATGAAGATTCTCGTTAGCATTCTGATGCTCATTTTCTTCCCATTCTTCACTGTTTTCGTGTCACTGTTACCTGCAGAGCAACTGTTTGGCATAGAATACGAAGTCCGTGTGATCAATGGCTTCACAAACAACTCCTCACTTCCTCTAGTGATATGGTGCGCTTCCAAAGACGGTGATATTGGCGGGCGTGCGCTCCAGGAGCATGATGATTTCAGTTGGCCTGTCAAGACCAACTTCTGGATTACTACAACAACCTCTCAATTCTCATGCACTGTCAAATTGGACCGTACAAGGAAAAGTTTTGATGCATTCAAGGTACCAAGAGATATCTATCGCTGTAGTGCTCTCAGGAAATGCTCGTGGTTGGTTATGGAAGATGGGTTTTATTTCAGCGATGATGAAGTAAACTGGAAGAAGGATTTCTCGTGGTAA MIMKILVSILMLIFFPFFTVFVSLLPAEQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWITTTTSQFSCTVKLDRTRKSFDAFKVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW* Homology
BLAST of CSPI03G11230 vs. ExPASy TrEMBL
Match: A0A5A7U6C9 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold171G004160 PE=3 SV=1) HSP 1 Score: 300.8 bits (769), Expect = 3.0e-78 Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 0
BLAST of CSPI03G11230 vs. ExPASy TrEMBL
Match: A0A1S4DSD2 (S-protein homolog OS=Cucumis melo OX=3656 GN=LOC103483510 PE=3 SV=1) HSP 1 Score: 300.8 bits (769), Expect = 3.0e-78 Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 0
BLAST of CSPI03G11230 vs. ExPASy TrEMBL
Match: A0A5D3D3G0 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G002390 PE=3 SV=1) HSP 1 Score: 294.3 bits (752), Expect = 2.8e-76 Identity = 144/145 (99.31%), Postives = 144/145 (99.31%), Query Frame = 0
BLAST of CSPI03G11230 vs. ExPASy TrEMBL
Match: A0A6J1GCS3 (S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111452986 PE=3 SV=1) HSP 1 Score: 273.9 bits (699), Expect = 4.0e-70 Identity = 131/143 (91.61%), Postives = 137/143 (95.80%), Query Frame = 0
BLAST of CSPI03G11230 vs. ExPASy TrEMBL
Match: A0A0A0L6V3 (S-protein homolog OS=Cucumis sativus OX=3659 GN=Csa_3G133250 PE=3 SV=1) HSP 1 Score: 259.6 bits (662), Expect = 7.8e-66 Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0
BLAST of CSPI03G11230 vs. NCBI nr
Match: XP_016898907.1 (PREDICTED: uncharacterized protein LOC103483510 [Cucumis melo] >KAA0049181.1 self-incompatibility family protein [Cucumis melo var. makuwa]) HSP 1 Score: 300.8 bits (769), Expect = 6.3e-78 Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 0
BLAST of CSPI03G11230 vs. NCBI nr
Match: XP_004134017.2 (S-protein homolog 6 [Cucumis sativus]) HSP 1 Score: 298.5 bits (763), Expect = 3.1e-77 Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 0
BLAST of CSPI03G11230 vs. NCBI nr
Match: TYK17379.1 (self-incompatibility family protein [Cucumis melo var. makuwa]) HSP 1 Score: 294.3 bits (752), Expect = 5.9e-76 Identity = 144/145 (99.31%), Postives = 144/145 (99.31%), Query Frame = 0
BLAST of CSPI03G11230 vs. NCBI nr
Match: XP_038876719.1 (S-protein homolog 6-like [Benincasa hispida]) HSP 1 Score: 288.1 bits (736), Expect = 4.2e-74 Identity = 139/143 (97.20%), Postives = 141/143 (98.60%), Query Frame = 0
BLAST of CSPI03G11230 vs. NCBI nr
Match: KAG7018836.1 (Self-incompatibility protein S1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 280.8 bits (717), Expect = 6.7e-72 Identity = 136/145 (93.79%), Postives = 141/145 (97.24%), Query Frame = 0
BLAST of CSPI03G11230 vs. TAIR 10
Match: AT3G24060.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 159.8 bits (403), Expect = 1.6e-39 Identity = 77/142 (54.23%), Postives = 98/142 (69.01%), Query Frame = 0
BLAST of CSPI03G11230 vs. TAIR 10
Match: AT1G26798.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 52.8 bits (125), Expect = 2.8e-07 Identity = 32/96 (33.33%), Postives = 46/96 (47.92%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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