CSPI03G09670 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI03G09670
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionDNA repair protein RAD51 homolog 3 isoform X3
LocationChr3: 7840887 .. 7844858 (-)
RNA-Seq ExpressionCSPI03G09670
SyntenyCSPI03G09670
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGTCGGGAGGTTACCCATCTCCGCCACGCTTCGGGGTAAACTGATTTCATCCGGCTACACTACTCTCTCCTCTCTCGCTTCCGTTTCTCCTTCCGACCTTGCTCGAGGTATCATTGCTCTTCTTTCTCTCATCAACGAACTTCTTTTTCAACTTCTATTTTTTGCTTCAAAATCTATTGTTTGTCATTTGTTCTCGAACTTTGTACATATGTTGTTTCTCTATATTTGTCGTGTGTTTCTCCACTTGTATGATATAACTCGACGCCCGAGTCTTTGATCAAGGAAGTTGAAATTGGAACAGACAGATTAATTTTCATTGCAGGAATGTTTAACCTCTTAAGCAATTGGCGATCCTGAACAGAACTTGAAATAGGAAAAGACCATTAGAGTCTTAGATATTTTGACTGTCTTAAAGATGTTAATTGCAACGATTGTTACATGATTACCATACTTCTTTGGATTGGATTAGATTTGTGTTGAGTTTCGGACGGAAATTATTTTTATATCCTTGCAAGTTCCTATTGGAATTAATCAAACAGTTTTGAAGACCAAAACTATACACAGCATTGGTTAATTCTTCCTTTTACTATACTCTTAAGGTTAGGTATTTGAAAAGGCTGTTATTGTTGGTCCTTAAAGAAGATGTTTCAACTTTAACTTGCTTCTCTCGTCGTGTTTTATTAATTTCAAGCAGTCGATCTTTACTGCCTCGAAGGGAATTTATTTGAACTGTCAATCTTCTCAACATCCTTGTTAAAATAAACAAATAACGTAGCATGTCTTTGATCTTAAACTATGATTGGATGGAAGCATGGCCTTTTTCTCCATTTTTAGTAACCCAAAATTCACGCACTTCAGCTTATTTGTAAGAAATTTTCATGAAAATGAACTTGTCTTGGGGGATTTTCCTCTCATCATGCCGTGGTTTATACTACGTGTATTACTCTTAATTTTATATATTTAGTTATACTTTCCTGCTCAGATTCATCGATCTTGTTATTTTAATTTTTACTTTAAATCCTTGTCTTTGGATATTGAGGGCTTCTTACAAGCCTTCTCATGTGATTCAGAATTGGAAATCTCGAACAATGAAGCTTTTGATGTTCTCAAGCTTGCATCACATGGTCGTGGGCTGGACAGGTCAGACGGGAGTGGTGCTATTGTTAATGGTACATTTTCCTCTTTGCATAGTTGATTTTTTGAAAGGGAAACAAAGAAGAAAATTCTGAACTGTGTTACTTATGCATATGGTGCATGTGGTTTGTTTTAAATGTCGTCATTTTATTGGATCTGAAGATTCTTCTTCAAAGATGAGTACTTCCTAATTTACTCCAAATAAAAGCAGATAGATCAAGGAATAGACAAAACTGGCTCTTCTCTCTAAAATATTTTAATGACAATTTGTCATAGGTATGGCCCATTTAAATGAAGCTTCAACTGTGTTTTATATAATAATATATTTTTTATATTGTTAACTTATCCCATAGTGGTTTATTTCCCTAAATTGGTAATGATGTATTTGTGTGTATCTCATTTCTTCTGCAAAAAAAGTTATTCGTATTGAACAATTGTTACGAGTTTCTATCATTACCCCAATGAATGTGGATAATACTTTATCAAAAGTGTAAATATCTTATGATATACCTTGACGTGCTCATTTACTGTAGATTAGCTGTTTTAAATATTAACGTAGATGTATTATCAGTCAATGCATTGATGTATATGATGTATATGCTTTTGTTGTCTTTTTAAATGACTTTGATATTTAGTCATTTAGTTATTTTCTAATTATTATTTATATATCGCGGAGTTAGTTCTGATCAATGTATGTCATTTCAGATATCTAATTTGATATCTTATATAGTACAGGTGCGGAGACTGCTTGGGATATGCTTCACAAAGAGCAGTTCATTCCACGTATTACCACATCTTGTGCAGATTTAGATAACCTTCTTGGCGGAGGAATTAATGTCAGTGAAGTTACGGAAATTGGTTAGTGAGCAATATCCTTTCTTCTGGTCAGTTGTATTATTATGTATATTGAATGCGTTGTTTTTTCCTCTTTATTTTGTAAAGAATAGTGCACTTTATTTTATTTATTTATAATATAATGTCAACTCATGTTCTTTTACTATGCTTCTAGCAATATGAGCATTTTAAAAAATCTCTTTCTTTATGCCAGGTGGAGTACCGGGCATAGGTAAAACACAGCTTGGGTATGAATATTTGTTATATGTTTCTTTCCCAATATGAAAATGGTTCTATGCTGGTCAGAAATAAAACGTCATGGTCTTTCTGTATGGGGTAACAGGATTCAACTTGCGGTAAATGTCCAAATTCCAGGTGCATTTGGTGGGGTAGGTGGAAAAGCAGTTTATATAGGTAGGTAGGTTCCCTTCCAGATTTTGCTCCTGGTTCTTTCGACATTTTTGCTTGAAATTGCAATCTAGTTAGGGATATGGCTTTCCTTGATTTCTAGATACAGAAGGGAGCTTTATGGTGGAGCGTGCTTTGCAGATTGCTGAAGCATGTATAGAGGATATGTCAGATTACAGTGTCTTACTAAAGAAGAATGCAATACCTCATCAAATTCAAATCGAACCGAAAGATATCTTGGAAAATATATTTTATTTTCGTGTCTGCAGCTACACAGAGCAAATTGCTCTAATAAATTATCTGGACAAGTTCATTACTGAGCACAAAGATGTAGGTAGATTTTTCTTTGAACTTCTAAATTTTTTGTTAGCGTGAGGTAACTGATTCAGATATGTGTAGTTCCCTCGTCTTTCAAGTTTATCTTGTATTACATTACTTAATGATGCCATGCTACTTGGAAGCTTCTTCTTTTGTCTAGAGTACGTTGTTGCTTTTCTTGAATTGGATATTTATAACCATTGTTATTAATTAAATGGTTTTCTTCTACATCTCGTTTGTCGGCCTACAGTTCAAATGTTCTGAAAATTACCGACTATTTCTTTGCAGGTTAAGGTTGTCATAGTTGATAGTGTGACATTCCATTTTCGCCAAAATTTTGATGATTTGGCCCTCCGGACACGGTTGCTCAGTGAAATGGCTCTTAAGTTCATGAAGCTGGCCAAGAAGTTCAGTTTGGCTGTAAGAATCAACCATCTCTCGTTATAATGTTTCGAACTAACTCAAATATACGATTAGGTATCAACTTAAATTGATATGAGTAGCATATGCTATATAGTTAATTGTAAAAGAATGTCATCTTCCTTGCAGTTGATGAGTTCCACTGACCTCCATTTGGTTGATTTGCAATGATAATTCACTGGCCTCGAATGTCTTAGCTTTAACATAAGGTTGAGCATGATATATGTAAATTCATCTATTTGAAGAAACGATATTTAAGTAGATAATGTTCTTCCATGCTCTTTCCATATCATGTCAATATTCTGAATATGCATCTTTTTACTTTTCAACCAATACTAAGAGAAATTCATATATGCTTGGTTATGTCACTCTACCGTTTTTATTTTACATATCATGTTCCTTCTAACATACTCCTGTTGACGTTTACGTTTATTCTAATAATGTTTTTTCCGTCTTTCTTGCATTTTTGCCCTCTTTTCTTCAACCGTGTGGCAGGTTGTTCTATTTAATCAGGTGACGACTAAGTTCGCCGAAGGCTCATTCCAATTAACTCTTGCATTGGGTATGTCCTTTTAAGTCACCCCTTACCTTCCACCGTTGAAATTCATTGTTGACATATTACGTTGTTGCACTCACTTGGATGTCTTTAAGCATTATGATTCCATCGAACTGATCAGGTGATAGCTGGTCACACTCTTGCACGAATCGGATCATTTTGTATTGGAACGGCGATGAAAGGTACGCATATCTTGAAAAGTCACCCTCTCTTCAATCTGCCTCGGCACCTTATTCTGTGACTTGTAGAGGCATTAGAAATTGTACATCCAGTAATAAGAGAACCAAAATGATGTAA

mRNA sequence

ATGGAGGTCGGGAGGTTACCCATCTCCGCCACGCTTCGGGGTAAACTGATTTCATCCGGCTACACTACTCTCTCCTCTCTCGCTTCCGTTTCTCCTTCCGACCTTGCTCGAGAATTGGAAATCTCGAACAATGAAGCTTTTGATGTTCTCAAGCTTGCATCACATGGTCGTGGGCTGGACAGGTCAGACGGGAGTGGTGCTATTGTTAATGGTGCGGAGACTGCTTGGGATATGCTTCACAAAGAGCAGTTCATTCCACGTATTACCACATCTTGTGCAGATTTAGATAACCTTCTTGGCGGAGGAATTAATGTCAGTGAAGTTACGGAAATTGGTGGAGTACCGGGCATAGGTAAAACACAGCTTGGGATTCAACTTGCGGTAAATGTCCAAATTCCAGGTGCATTTGGTGGGGTAGGTGGAAAAGCAGTTTATATAGATACAGAAGGGAGCTTTATGGTGGAGCGTGCTTTGCAGATTGCTGAAGCATGTATAGAGGATATGTCAGATTACAGTGTCTTACTAAAGAAGAATGCAATACCTCATCAAATTCAAATCGAACCGAAAGATATCTTGGAAAATATATTTTATTTTCGTGTCTGCAGCTACACAGAGCAAATTGCTCTAATAAATTATCTGGACAAGTTCATTACTGAGCACAAAGATGTTAAGGTTGTCATAGTTGATAGTGTGACATTCCATTTTCGCCAAAATTTTGATGATTTGGCCCTCCGGACACGGTTGCTCAGTGAAATGGCTCTTAAGTTCATGAAGCTGGCCAAGAAGTTCAGTTTGGCTGTTGTTCTATTTAATCAGGTGACGACTAAGTTCGCCGAAGGCTCATTCCAATTAACTCTTGCATTGGGTATGTCCTTTTAAGTCACCCCTTACCTTCCACCGTTGAAATTCATTGTTGACATATTACGTTGTTGCACTCACTTGGATGTCTTTAAGCATTATGATTCCATCGAACTGATCAGGTGATAGCTGGTCACACTCTTGCACGAATCGGATCATTTTGTATTGGAACGGCGATGAAAGGTACGCATATCTTGAAAAGTCACCCTCTCTTCAATCTGCCTCGGCACCTTATTCTGTGACTTGTAGAGGCATTAGAAATTGTACATCCAGTAATAAGAGAACCAAAATGATGTAA

Coding sequence (CDS)

ATGGAGGTCGGGAGGTTACCCATCTCCGCCACGCTTCGGGGTAAACTGATTTCATCCGGCTACACTACTCTCTCCTCTCTCGCTTCCGTTTCTCCTTCCGACCTTGCTCGAGAATTGGAAATCTCGAACAATGAAGCTTTTGATGTTCTCAAGCTTGCATCACATGGTCGTGGGCTGGACAGGTCAGACGGGAGTGGTGCTATTGTTAATGGTGCGGAGACTGCTTGGGATATGCTTCACAAAGAGCAGTTCATTCCACGTATTACCACATCTTGTGCAGATTTAGATAACCTTCTTGGCGGAGGAATTAATGTCAGTGAAGTTACGGAAATTGGTGGAGTACCGGGCATAGGTAAAACACAGCTTGGGATTCAACTTGCGGTAAATGTCCAAATTCCAGGTGCATTTGGTGGGGTAGGTGGAAAAGCAGTTTATATAGATACAGAAGGGAGCTTTATGGTGGAGCGTGCTTTGCAGATTGCTGAAGCATGTATAGAGGATATGTCAGATTACAGTGTCTTACTAAAGAAGAATGCAATACCTCATCAAATTCAAATCGAACCGAAAGATATCTTGGAAAATATATTTTATTTTCGTGTCTGCAGCTACACAGAGCAAATTGCTCTAATAAATTATCTGGACAAGTTCATTACTGAGCACAAAGATGTTAAGGTTGTCATAGTTGATAGTGTGACATTCCATTTTCGCCAAAATTTTGATGATTTGGCCCTCCGGACACGGTTGCTCAGTGAAATGGCTCTTAAGTTCATGAAGCTGGCCAAGAAGTTCAGTTTGGCTGTTGTTCTATTTAATCAGGTGACGACTAAGTTCGCCGAAGGCTCATTCCAATTAACTCTTGCATTGGGTATGTCCTTTTAA

Protein sequence

MEVGRLPISATLRGKLISSGYTTLSSLASVSPSDLARELEISNNEAFDVLKLASHGRGLDRSDGSGAIVNGAETAWDMLHKEQFIPRITTSCADLDNLLGGGINVSEVTEIGGVPGIGKTQLGIQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAIPHQIQIEPKDILENIFYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFDDLALRTRLLSEMALKFMKLAKKFSLAVVLFNQVTTKFAEGSFQLTLALGMSF*
Homology
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BLAST of CSPI03G09670 vs. ExPASy Swiss-Prot
Match: Q8GXF0 (DNA repair protein RAD51 homolog 3 OS=Arabidopsis thaliana OX=3702 GN=RAD51C PE=1 SV=2)

HSP 1 Score: 415.2 bits (1066), Expect = 6.0e-115
Identity = 209/292 (71.58%), Postives = 256/292 (87.67%), Query Frame = 0 

Query: 1   MEVGRLPISATLRGKLISSGYTTLSSLASVSPSDLARELEISNNEAFDVLKLASHGRGLD 60
           ME  RLP+S ++RGKLIS+GYT LSS+ASVS SDLAR+  I+  EAF++LKLA+      
Sbjct: 22  MEAWRLPLSPSIRGKLISAGYTCLSSIASVSSSDLARDANITEEEAFEILKLANQ----S 81

Query: 61  RSDGSGAIVNGAETAWDMLHKEQFIPRITTSCADLDNLLGGGINVSEVTEIGGVPGIGKT 120
             +GS +++NGA+ AWDMLH+E+ +PRITTSC+DLDN+LGGGI+  +VTEIGGVPGIGKT
Sbjct: 82  CCNGSRSLINGAKNAWDMLHEEESLPRITTSCSDLDNILGGGISCRDVTEIGGVPGIGKT 141

Query: 121 QLGIQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAI 180
           Q+GIQL+VNVQIP   GG+GGKA+YIDTEGSFMVERALQIAEAC+EDM +Y+  + K+  
Sbjct: 142 QIGIQLSVNVQIPRECGGLGGKAIYIDTEGSFMVERALQIAEACVEDMEEYTGYMHKHFQ 201

Query: 181 PHQIQIEPKDILENIFYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFD 240
            +Q+Q++P+DILENIFYFRVCSYTEQIAL+N+L+KFI+E+KDVKVVIVDS+TFHFRQ++D
Sbjct: 202 ANQVQMKPEDILENIFYFRVCSYTEQIALVNHLEKFISENKDVKVVIVDSITFHFRQDYD 261

Query: 241 DLALRTRLLSEMALKFMKLAKKFSLAVVLFNQVTTKFAEGSFQLTLALGMSF 293
           DLA RTR+LSEMALKFMKLAKKFSLAVVL NQVTTKF+EGSFQL LALG S+
Sbjct: 262 DLAQRTRVLSEMALKFMKLAKKFSLAVVLLNQVTTKFSEGSFQLALALGDSW 309

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BLAST of CSPI03G09670 vs. ExPASy Swiss-Prot
Match: Q8R2J9 (DNA repair protein RAD51 homolog 3 OS=Cricetulus griseus OX=10029 GN=RAD51C PE=2 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 1.3e-56
Identity = 128/295 (43.39%), Postives = 188/295 (63.73%), Query Frame = 0 

Query: 2   EVGRLPISATLRGKLISSGYTTLSSLASVSPSDLARELEISNNEAFDVLKLASHGRGLDR 61
           E+   P+S T+R KL+++G+ T   +  V PS+L++E+ IS  EA + L++       D+
Sbjct: 4   ELVSFPLSPTVRVKLVAAGFQTAEDVLGVKPSELSKEVGISKEEALETLQIVRRESLTDK 63

Query: 62  SDGSGAIVNGAE-TAWDMLHKEQFIPRITTSCADLDNLLGGGINVSEVTEIGGVPGIGKT 121
              +GA V G + TA ++L +E     I T C+ LDN+LGGGI + + TE+ GVPG+GKT
Sbjct: 64  PRCAGASVAGKKYTALELLEQEHTQGFIITFCSALDNILGGGIPLMKTTEVCGVPGVGKT 123

Query: 122 QLGIQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAI 181
           QL +QLAV+VQIP  FGGV G+AV+IDTEGSFMV+R + +A ACI+ +   +   K    
Sbjct: 124 QLCMQLAVDVQIPECFGGVAGEAVFIDTEGSFMVDRVVTLANACIQHLHLIAGTHKDE-- 183

Query: 182 PHQIQIEP---KDILENIFYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQ 241
            HQ  +E    ++IL +I+YFR   YTE +A +  L  F++ H  V++VI+D +   FR 
Sbjct: 184 EHQKALEGFTLENILSHIYYFRCHDYTELLAQVYLLPDFLSNHSKVQLVIIDGIALPFRH 243

Query: 242 NFDDLALRTRLLSEMALKFMKLAKKFSLAVVLFNQVTTKFAEGSFQLTLALGMSF 293
           + DDL+LRTRLL+ +A + + LA    LAV+L NQ+TTK  +    L  ALG S+
Sbjct: 244 DLDDLSLRTRLLNGLAQQMISLANNHRLAVILTNQMTTKIDKNQALLVPALGESW 296

[Close]
BLAST of CSPI03G09670 vs. ExPASy Swiss-Prot
Match: Q924H5 (DNA repair protein RAD51 homolog 3 OS=Mus musculus OX=10090 GN=Rad51c PE=2 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 5.4e-55
Identity = 122/290 (42.07%), Postives = 187/290 (64.48%), Query Frame = 0 

Query: 7   PISATLRGKLISSGYTTLSSLASVSPSDLARELEISNNEAFDVLKLASHGRGLDRSDGSG 66
           P+S  +RGKL+++G+ T   +  V PS+L++E+ IS  EA + L++       ++   +G
Sbjct: 9   PLSPAVRGKLVAAGFQTAEDVLEVKPSELSKEVGISKEEALETLQILRRECLTNKPRCAG 68

Query: 67  -AIVNGAETAWDMLHKEQFIPRITTSCADLDNLLGGGINVSEVTEIGGVPGIGKTQLGIQ 126
            ++ N   TA ++L +E     I T C+ LDN+LGGGI + + TE+ GVPG+GKTQL +Q
Sbjct: 69  TSVANEKCTALELLEQEHTQGFIITFCSALDNILGGGIPLMKTTEVCGVPGVGKTQLCMQ 128

Query: 127 LAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAIPHQIQ 186
           LAV+VQIP  FGGV G+AV+IDTEGSFMV+R + +A ACI+ +  + +        HQ  
Sbjct: 129 LAVDVQIPECFGGVAGEAVFIDTEGSFMVDRVVSLATACIQHL--HLIAGTHTEEEHQKA 188

Query: 187 IEP---KDILENIFYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFDDL 246
           ++    ++IL +I+YFR   YTE +A +  L  F+++H  V++VI+D + F FR + +DL
Sbjct: 189 LKDFTLENILSHIYYFRCHDYTELLAQVYLLPDFLSDHPKVQLVIIDGIAFPFRHDLEDL 248

Query: 247 ALRTRLLSEMALKFMKLAKKFSLAVVLFNQVTTKFAEGSFQLTLALGMSF 293
           +LRTRLL+ +A + + LA    LAV+L NQ+TTK  +    L  ALG S+
Sbjct: 249 SLRTRLLNGLAQQMISLANNHRLAVILTNQMTTKIDKNQALLVPALGESW 296

[Close]
BLAST of CSPI03G09670 vs. ExPASy Swiss-Prot
Match: O43502 (DNA repair protein RAD51 homolog 3 OS=Homo sapiens OX=9606 GN=RAD51C PE=1 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 5.9e-54
Identity = 124/290 (42.76%), Postives = 182/290 (62.76%), Query Frame = 0 

Query: 7   PISATLRGKLISSGYTTLSSLASVSPSDLARELEISNNEAFDVLKLASHGRGLDRSDGSG 66
           P+S  +R KL+S+G+ T   L  V PS+L++E+ IS  EA + L++       ++   +G
Sbjct: 18  PLSPAVRVKLVSAGFQTAEELLEVKPSELSKEVGISKAEALETLQIIRRECLTNKPRYAG 77

Query: 67  AIVNGAE-TAWDMLHKEQFIPRITTSCADLDNLLGGGINVSEVTEIGGVPGIGKTQLGIQ 126
              +  + TA ++L +E     I T C+ LD++LGGG+ + + TEI G PG+GKTQL +Q
Sbjct: 78  TSESHKKCTALELLEQEHTQGFIITFCSALDDILGGGVPLMKTTEICGAPGVGKTQLCMQ 137

Query: 127 LAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAIPHQIQ 186
           LAV+VQIP  FGGV G+AV+IDTEGSFMV+R + +A ACI+ +    +  K     H+  
Sbjct: 138 LAVDVQIPECFGGVAGEAVFIDTEGSFMVDRVVDLATACIQHLQ--LIAEKHKGEEHRKA 197

Query: 187 IEP---KDILENIFYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFDDL 246
           +E     +IL +I+YFR   YTE +A +  L  F++EH  V++VIVD + F FR + DDL
Sbjct: 198 LEDFTLDNILSHIYYFRCRDYTELLAQVYLLPDFLSEHSKVRLVIVDGIAFPFRHDLDDL 257

Query: 247 ALRTRLLSEMALKFMKLAKKFSLAVVLFNQVTTKFAEGSFQLTLALGMSF 293
           +LRTRLL+ +A + + LA    LAV+L NQ+TTK       L  ALG S+
Sbjct: 258 SLRTRLLNGLAQQMISLANNHRLAVILTNQMTTKIDRNQALLVPALGESW 305

[Close]
BLAST of CSPI03G09670 vs. ExPASy Swiss-Prot
Match: Q54PJ7 (DNA repair protein RAD51 homolog 3 OS=Dictyostelium discoideum OX=44689 GN=rad51c PE=3 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 4.6e-38
Identity = 85/191 (44.50%), Postives = 124/191 (64.92%), Query Frame = 0 

Query: 88  ITTSCADLDNLLGGGINVSEVTEIGGVPGIGKTQLGIQLAVNVQIPGAFGGVGGKAVYID 147
           I T C+++D +L GG  + ++TEI GVPGIGKT +  QL VN  IP   GGV GKA+YID
Sbjct: 64  IITFCSEIDQMLNGGTPLKKITEICGVPGIGKTNMAFQLLVNTSIPFDLGGVQGKAIYID 123

Query: 148 TEGSFMVERALQIAEACIEDMSDYSVLLKKNAIPHQIQIEPKDILENIFYFRVCSYTEQI 207
           TEGS+  +R  ++A   +  +    VLLK            + +L +I+Y+RV  Y E I
Sbjct: 124 TEGSYSCQRVREMATHLVNHLE--CVLLKNPMTQTTYIPTVETVLNSIYYYRVYHYIEII 183

Query: 208 ALINYLDKFITEHKDVKVVIVDSVTFHFRQNFDDLALRTRLLSEMALKFMKLAKKFSLAV 267
           +LI+ L  F+ ++KDVK+++VDS+T+ FR +F D+ LRTR L  +A   M +A +++LAV
Sbjct: 184 SLIHQLPLFLEKNKDVKLIVVDSITYPFRCDFKDMGLRTRSLLSLAQNLMNIATRYNLAV 243

Query: 268 VLFNQVTTKFA 279
           V+ NQVTTK +
Sbjct: 244 VVMNQVTTKIS 252

[Close]
BLAST of CSPI03G09670 vs. ExPASy TrEMBL
Match: A0A0A0L3U2 (RECA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G126250 PE=4 SV=1)

HSP 1 Score: 557.8 bits (1436), Expect = 2.8e-155
Identity = 290/292 (99.32%), Postives = 291/292 (99.66%), Query Frame = 0 

Query: 1   MEVGRLPISATLRGKLISSGYTTLSSLASVSPSDLARELEISNNEAFDVLKLASHGRGLD 60
           MEVGRLPISATLRGKLISSGYTTLSSLASVSPSDLARELEISNNEAFDVLKLASHGRGLD
Sbjct: 1   MEVGRLPISATLRGKLISSGYTTLSSLASVSPSDLARELEISNNEAFDVLKLASHGRGLD 60

Query: 61  RSDGSGAIVNGAETAWDMLHKEQFIPRITTSCADLDNLLGGGINVSEVTEIGGVPGIGKT 120
           RSDGSGAIVNGAETAWDMLHKEQFIPRITTSCADLDNLLGGGINVSEVTEIGGVPGIGKT
Sbjct: 61  RSDGSGAIVNGAETAWDMLHKEQFIPRITTSCADLDNLLGGGINVSEVTEIGGVPGIGKT 120

Query: 121 QLGIQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAI 180
           QLGIQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAI
Sbjct: 121 QLGIQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAI 180

Query: 181 PHQIQIEPKDILENIFYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFD 240
           PHQIQIEPKDILENIFYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFD
Sbjct: 181 PHQIQIEPKDILENIFYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFD 240

Query: 241 DLALRTRLLSEMALKFMKLAKKFSLAVVLFNQVTTKFAEGSFQLTLALGMSF 293
           DLALRTRLLSEMALKFMKLAKKFSLAVVLFNQVTTKFAEGSFQLTLALG S+
Sbjct: 241 DLALRTRLLSEMALKFMKLAKKFSLAVVLFNQVTTKFAEGSFQLTLALGDSW 292

[Close]
BLAST of CSPI03G09670 vs. ExPASy TrEMBL
Match: A0A5A7U6C3 (DNA repair protein RAD51-like protein 3 isoform X3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G003820 PE=4 SV=1)

HSP 1 Score: 548.5 bits (1412), Expect = 1.7e-152
Identity = 285/292 (97.60%), Postives = 290/292 (99.32%), Query Frame = 0 

Query: 1   MEVGRLPISATLRGKLISSGYTTLSSLASVSPSDLARELEISNNEAFDVLKLASHGRGLD 60
           MEVGRLPISATLRGKLISSGYTTLSSLASVSPS+LARELEISNNEAF+VLKLASHGRGLD
Sbjct: 1   MEVGRLPISATLRGKLISSGYTTLSSLASVSPSNLARELEISNNEAFEVLKLASHGRGLD 60

Query: 61  RSDGSGAIVNGAETAWDMLHKEQFIPRITTSCADLDNLLGGGINVSEVTEIGGVPGIGKT 120
           RS+GSGAIVNGAETAWDMLHKEQFIPRITTSCADLDNLLGGGINVSEVTEIGGVPGIGKT
Sbjct: 61  RSEGSGAIVNGAETAWDMLHKEQFIPRITTSCADLDNLLGGGINVSEVTEIGGVPGIGKT 120

Query: 121 QLGIQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAI 180
           QLGIQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAI
Sbjct: 121 QLGIQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAI 180

Query: 181 PHQIQIEPKDILENIFYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFD 240
           PHQIQIEPK+ILENIFYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFD
Sbjct: 181 PHQIQIEPKNILENIFYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFD 240

Query: 241 DLALRTRLLSEMALKFMKLAKKFSLAVVLFNQVTTKFAEGSFQLTLALGMSF 293
           DLALRTRLLSEMALK MKLAKKFSLAVVLFNQVTTKFAEGSFQLTLALG S+
Sbjct: 241 DLALRTRLLSEMALKLMKLAKKFSLAVVLFNQVTTKFAEGSFQLTLALGDSW 292

[Close]
BLAST of CSPI03G09670 vs. ExPASy TrEMBL
Match: A0A1S3AWE4 (DNA repair protein RAD51 homolog 3 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103483364 PE=4 SV=1)

HSP 1 Score: 548.5 bits (1412), Expect = 1.7e-152
Identity = 285/292 (97.60%), Postives = 290/292 (99.32%), Query Frame = 0 

Query: 1   MEVGRLPISATLRGKLISSGYTTLSSLASVSPSDLARELEISNNEAFDVLKLASHGRGLD 60
           MEVGRLPISATLRGKLISSGYTTLSSLASVSPS+LARELEISNNEAF+VLKLASHGRGLD
Sbjct: 1   MEVGRLPISATLRGKLISSGYTTLSSLASVSPSNLARELEISNNEAFEVLKLASHGRGLD 60

Query: 61  RSDGSGAIVNGAETAWDMLHKEQFIPRITTSCADLDNLLGGGINVSEVTEIGGVPGIGKT 120
           RS+GSGAIVNGAETAWDMLHKEQFIPRITTSCADLDNLLGGGINVSEVTEIGGVPGIGKT
Sbjct: 61  RSEGSGAIVNGAETAWDMLHKEQFIPRITTSCADLDNLLGGGINVSEVTEIGGVPGIGKT 120

Query: 121 QLGIQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAI 180
           QLGIQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAI
Sbjct: 121 QLGIQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAI 180

Query: 181 PHQIQIEPKDILENIFYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFD 240
           PHQIQIEPK+ILENIFYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFD
Sbjct: 181 PHQIQIEPKNILENIFYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFD 240

Query: 241 DLALRTRLLSEMALKFMKLAKKFSLAVVLFNQVTTKFAEGSFQLTLALGMSF 293
           DLALRTRLLSEMALK MKLAKKFSLAVVLFNQVTTKFAEGSFQLTLALG S+
Sbjct: 241 DLALRTRLLSEMALKLMKLAKKFSLAVVLFNQVTTKFAEGSFQLTLALGDSW 292

[Close]
BLAST of CSPI03G09670 vs. ExPASy TrEMBL
Match: A0A1S3AVR1 (DNA repair protein RAD51 homolog 3 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483364 PE=4 SV=1)

HSP 1 Score: 541.6 bits (1394), Expect = 2.1e-150
Identity = 285/299 (95.32%), Postives = 290/299 (96.99%), Query Frame = 0 

Query: 1   MEVGRLPISATLRGKLISSGYTTLSSLASVSPSDLARELEISNNEAFDVLKLASHGRGLD 60
           MEVGRLPISATLRGKLISSGYTTLSSLASVSPS+LARELEISNNEAF+VLKLASHGRGLD
Sbjct: 1   MEVGRLPISATLRGKLISSGYTTLSSLASVSPSNLARELEISNNEAFEVLKLASHGRGLD 60

Query: 61  RSDGSGAIVNGAETAWDMLHKEQFIPRITTSCADLDNLLGGGINVSEVTEIGGVPGIGKT 120
           RS+GSGAIVNGAETAWDMLHKEQFIPRITTSCADLDNLLGGGINVSEVTEIGGVPGIGKT
Sbjct: 61  RSEGSGAIVNGAETAWDMLHKEQFIPRITTSCADLDNLLGGGINVSEVTEIGGVPGIGKT 120

Query: 121 QLGIQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAI 180
           QLGIQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAI
Sbjct: 121 QLGIQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAI 180

Query: 181 PHQIQIEPKDILENIFYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFD 240
           PHQIQIEPK+ILENIFYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFD
Sbjct: 181 PHQIQIEPKNILENIFYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFD 240

Query: 241 DLALRTRLLSEMALKFMKLAKKFSLA-------VVLFNQVTTKFAEGSFQLTLALGMSF 293
           DLALRTRLLSEMALK MKLAKKFSLA       VVLFNQVTTKFAEGSFQLTLALG S+
Sbjct: 241 DLALRTRLLSEMALKLMKLAKKFSLAVRINHLVVVLFNQVTTKFAEGSFQLTLALGDSW 299

[Close]
BLAST of CSPI03G09670 vs. ExPASy TrEMBL
Match: A0A1S4DSI5 (DNA repair protein RAD51 homolog 3 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103483364 PE=4 SV=1)

HSP 1 Score: 532.3 bits (1370), Expect = 1.2e-147
Identity = 283/299 (94.65%), Postives = 288/299 (96.32%), Query Frame = 0 

Query: 1   MEVGRLPISATLRGKLISSGYTTLSSLASVSPSDLARELEISNNEAFDVLKLASHGRGLD 60
           MEVGRLPISATLRGKLISSGYTTLSSLASVSPS+LARELEISNNEAF+VLKLASHGRGLD
Sbjct: 1   MEVGRLPISATLRGKLISSGYTTLSSLASVSPSNLARELEISNNEAFEVLKLASHGRGLD 60

Query: 61  RSDGSGAIVNGAETAWDMLHKEQFIPRITTSCADLDNLLGGGINVSEVTEIGGVPGIGKT 120
           RS+GSGAIVNGAETAWDMLHKEQFIPRITTSCADLDNLLGGGINVSEVTEIGGVPGIGKT
Sbjct: 61  RSEGSGAIVNGAETAWDMLHKEQFIPRITTSCADLDNLLGGGINVSEVTEIGGVPGIGKT 120

Query: 121 QLGIQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAI 180
           QLGIQLAVNVQIPGAFGGVGGKAVYI  EGSFMVERALQIAEACIEDMSDYSVLLKKNAI
Sbjct: 121 QLGIQLAVNVQIPGAFGGVGGKAVYI--EGSFMVERALQIAEACIEDMSDYSVLLKKNAI 180

Query: 181 PHQIQIEPKDILENIFYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFD 240
           PHQIQIEPK+ILENIFYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFD
Sbjct: 181 PHQIQIEPKNILENIFYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFD 240

Query: 241 DLALRTRLLSEMALKFMKLAKKFSLA-------VVLFNQVTTKFAEGSFQLTLALGMSF 293
           DLALRTRLLSEMALK MKLAKKFSLA       VVLFNQVTTKFAEGSFQLTLALG S+
Sbjct: 241 DLALRTRLLSEMALKLMKLAKKFSLAVRINHLVVVLFNQVTTKFAEGSFQLTLALGDSW 297

[Close]
BLAST of CSPI03G09670 vs. NCBI nr
Match: XP_004133923.1 (DNA repair protein RAD51 homolog 3 isoform X1 [Cucumis sativus])

HSP 1 Score: 557.8 bits (1436), Expect = 5.7e-155
Identity = 290/292 (99.32%), Postives = 291/292 (99.66%), Query Frame = 0 

Query: 1   MEVGRLPISATLRGKLISSGYTTLSSLASVSPSDLARELEISNNEAFDVLKLASHGRGLD 60
           MEVGRLPISATLRGKLISSGYTTLSSLASVSPSDLARELEISNNEAFDVLKLASHGRGLD
Sbjct: 1   MEVGRLPISATLRGKLISSGYTTLSSLASVSPSDLARELEISNNEAFDVLKLASHGRGLD 60

Query: 61  RSDGSGAIVNGAETAWDMLHKEQFIPRITTSCADLDNLLGGGINVSEVTEIGGVPGIGKT 120
           RSDGSGAIVNGAETAWDMLHKEQFIPRITTSCADLDNLLGGGINVSEVTEIGGVPGIGKT
Sbjct: 61  RSDGSGAIVNGAETAWDMLHKEQFIPRITTSCADLDNLLGGGINVSEVTEIGGVPGIGKT 120

Query: 121 QLGIQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAI 180
           QLGIQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAI
Sbjct: 121 QLGIQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAI 180

Query: 181 PHQIQIEPKDILENIFYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFD 240
           PHQIQIEPKDILENIFYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFD
Sbjct: 181 PHQIQIEPKDILENIFYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFD 240

Query: 241 DLALRTRLLSEMALKFMKLAKKFSLAVVLFNQVTTKFAEGSFQLTLALGMSF 293
           DLALRTRLLSEMALKFMKLAKKFSLAVVLFNQVTTKFAEGSFQLTLALG S+
Sbjct: 241 DLALRTRLLSEMALKFMKLAKKFSLAVVLFNQVTTKFAEGSFQLTLALGDSW 292

[Close]
BLAST of CSPI03G09670 vs. NCBI nr
Match: XP_008438178.1 (PREDICTED: DNA repair protein RAD51 homolog 3 isoform X3 [Cucumis melo] >KAA0049049.1 DNA repair protein RAD51-like protein 3 isoform X3 [Cucumis melo var. makuwa] >TYK17514.1 DNA repair protein RAD51-like protein 3 isoform X3 [Cucumis melo var. makuwa])

HSP 1 Score: 548.5 bits (1412), Expect = 3.5e-152
Identity = 285/292 (97.60%), Postives = 290/292 (99.32%), Query Frame = 0 

Query: 1   MEVGRLPISATLRGKLISSGYTTLSSLASVSPSDLARELEISNNEAFDVLKLASHGRGLD 60
           MEVGRLPISATLRGKLISSGYTTLSSLASVSPS+LARELEISNNEAF+VLKLASHGRGLD
Sbjct: 1   MEVGRLPISATLRGKLISSGYTTLSSLASVSPSNLARELEISNNEAFEVLKLASHGRGLD 60

Query: 61  RSDGSGAIVNGAETAWDMLHKEQFIPRITTSCADLDNLLGGGINVSEVTEIGGVPGIGKT 120
           RS+GSGAIVNGAETAWDMLHKEQFIPRITTSCADLDNLLGGGINVSEVTEIGGVPGIGKT
Sbjct: 61  RSEGSGAIVNGAETAWDMLHKEQFIPRITTSCADLDNLLGGGINVSEVTEIGGVPGIGKT 120

Query: 121 QLGIQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAI 180
           QLGIQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAI
Sbjct: 121 QLGIQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAI 180

Query: 181 PHQIQIEPKDILENIFYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFD 240
           PHQIQIEPK+ILENIFYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFD
Sbjct: 181 PHQIQIEPKNILENIFYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFD 240

Query: 241 DLALRTRLLSEMALKFMKLAKKFSLAVVLFNQVTTKFAEGSFQLTLALGMSF 293
           DLALRTRLLSEMALK MKLAKKFSLAVVLFNQVTTKFAEGSFQLTLALG S+
Sbjct: 241 DLALRTRLLSEMALKLMKLAKKFSLAVVLFNQVTTKFAEGSFQLTLALGDSW 292

[Close]
BLAST of CSPI03G09670 vs. NCBI nr
Match: XP_008438177.1 (PREDICTED: DNA repair protein RAD51 homolog 3 isoform X1 [Cucumis melo])

HSP 1 Score: 541.6 bits (1394), Expect = 4.2e-150
Identity = 285/299 (95.32%), Postives = 290/299 (96.99%), Query Frame = 0 

Query: 1   MEVGRLPISATLRGKLISSGYTTLSSLASVSPSDLARELEISNNEAFDVLKLASHGRGLD 60
           MEVGRLPISATLRGKLISSGYTTLSSLASVSPS+LARELEISNNEAF+VLKLASHGRGLD
Sbjct: 1   MEVGRLPISATLRGKLISSGYTTLSSLASVSPSNLARELEISNNEAFEVLKLASHGRGLD 60

Query: 61  RSDGSGAIVNGAETAWDMLHKEQFIPRITTSCADLDNLLGGGINVSEVTEIGGVPGIGKT 120
           RS+GSGAIVNGAETAWDMLHKEQFIPRITTSCADLDNLLGGGINVSEVTEIGGVPGIGKT
Sbjct: 61  RSEGSGAIVNGAETAWDMLHKEQFIPRITTSCADLDNLLGGGINVSEVTEIGGVPGIGKT 120

Query: 121 QLGIQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAI 180
           QLGIQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAI
Sbjct: 121 QLGIQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAI 180

Query: 181 PHQIQIEPKDILENIFYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFD 240
           PHQIQIEPK+ILENIFYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFD
Sbjct: 181 PHQIQIEPKNILENIFYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFD 240

Query: 241 DLALRTRLLSEMALKFMKLAKKFSLA-------VVLFNQVTTKFAEGSFQLTLALGMSF 293
           DLALRTRLLSEMALK MKLAKKFSLA       VVLFNQVTTKFAEGSFQLTLALG S+
Sbjct: 241 DLALRTRLLSEMALKLMKLAKKFSLAVRINHLVVVLFNQVTTKFAEGSFQLTLALGDSW 299

[Close]
BLAST of CSPI03G09670 vs. NCBI nr
Match: XP_038879233.1 (DNA repair protein RAD51 homolog 3 isoform X1 [Benincasa hispida])

HSP 1 Score: 540.0 bits (1390), Expect = 1.2e-149
Identity = 279/292 (95.55%), Postives = 286/292 (97.95%), Query Frame = 0 

Query: 1   MEVGRLPISATLRGKLISSGYTTLSSLASVSPSDLARELEISNNEAFDVLKLASHGRGLD 60
           MEVGRLPISATLRGKLISSGYTTLSSLASVSPSDLARELEISNNEAF+VLK ASHG GLD
Sbjct: 1   MEVGRLPISATLRGKLISSGYTTLSSLASVSPSDLARELEISNNEAFEVLKFASHGSGLD 60

Query: 61  RSDGSGAIVNGAETAWDMLHKEQFIPRITTSCADLDNLLGGGINVSEVTEIGGVPGIGKT 120
           RSDGSGAIVNGAETAWDMLHKEQFI RITTSCADLDNLLGGG+N SEVTEIGGVPGIGKT
Sbjct: 61  RSDGSGAIVNGAETAWDMLHKEQFISRITTSCADLDNLLGGGVNSSEVTEIGGVPGIGKT 120

Query: 121 QLGIQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAI 180
           QLGIQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYS+LLKKNAI
Sbjct: 121 QLGIQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSILLKKNAI 180

Query: 181 PHQIQIEPKDILENIFYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFD 240
           PHQIQ+EPKDIL+NI+YFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFD
Sbjct: 181 PHQIQMEPKDILKNIYYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFD 240

Query: 241 DLALRTRLLSEMALKFMKLAKKFSLAVVLFNQVTTKFAEGSFQLTLALGMSF 293
           DLALRTRLLSEMALK MKLAKKFSLAVVLFNQVTTKFAEGSFQLTLALG S+
Sbjct: 241 DLALRTRLLSEMALKLMKLAKKFSLAVVLFNQVTTKFAEGSFQLTLALGDSW 292

[Close]
BLAST of CSPI03G09670 vs. NCBI nr
Match: XP_016898928.1 (PREDICTED: DNA repair protein RAD51 homolog 3 isoform X2 [Cucumis melo])

HSP 1 Score: 532.3 bits (1370), Expect = 2.6e-147
Identity = 283/299 (94.65%), Postives = 288/299 (96.32%), Query Frame = 0 

Query: 1   MEVGRLPISATLRGKLISSGYTTLSSLASVSPSDLARELEISNNEAFDVLKLASHGRGLD 60
           MEVGRLPISATLRGKLISSGYTTLSSLASVSPS+LARELEISNNEAF+VLKLASHGRGLD
Sbjct: 1   MEVGRLPISATLRGKLISSGYTTLSSLASVSPSNLARELEISNNEAFEVLKLASHGRGLD 60

Query: 61  RSDGSGAIVNGAETAWDMLHKEQFIPRITTSCADLDNLLGGGINVSEVTEIGGVPGIGKT 120
           RS+GSGAIVNGAETAWDMLHKEQFIPRITTSCADLDNLLGGGINVSEVTEIGGVPGIGKT
Sbjct: 61  RSEGSGAIVNGAETAWDMLHKEQFIPRITTSCADLDNLLGGGINVSEVTEIGGVPGIGKT 120

Query: 121 QLGIQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAI 180
           QLGIQLAVNVQIPGAFGGVGGKAVYI  EGSFMVERALQIAEACIEDMSDYSVLLKKNAI
Sbjct: 121 QLGIQLAVNVQIPGAFGGVGGKAVYI--EGSFMVERALQIAEACIEDMSDYSVLLKKNAI 180

Query: 181 PHQIQIEPKDILENIFYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFD 240
           PHQIQIEPK+ILENIFYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFD
Sbjct: 181 PHQIQIEPKNILENIFYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFD 240

Query: 241 DLALRTRLLSEMALKFMKLAKKFSLA-------VVLFNQVTTKFAEGSFQLTLALGMSF 293
           DLALRTRLLSEMALK MKLAKKFSLA       VVLFNQVTTKFAEGSFQLTLALG S+
Sbjct: 241 DLALRTRLLSEMALKLMKLAKKFSLAVRINHLVVVLFNQVTTKFAEGSFQLTLALGDSW 297

[Close]
BLAST of CSPI03G09670 vs. TAIR 10
Match: AT2G45280.1 (RAS associated with diabetes protein 51C )

HSP 1 Score: 415.2 bits (1066), Expect = 4.3e-116
Identity = 209/292 (71.58%), Postives = 256/292 (87.67%), Query Frame = 0 

Query: 1   MEVGRLPISATLRGKLISSGYTTLSSLASVSPSDLARELEISNNEAFDVLKLASHGRGLD 60
           ME  RLP+S ++RGKLIS+GYT LSS+ASVS SDLAR+  I+  EAF++LKLA+      
Sbjct: 22  MEAWRLPLSPSIRGKLISAGYTCLSSIASVSSSDLARDANITEEEAFEILKLANQ----S 81

Query: 61  RSDGSGAIVNGAETAWDMLHKEQFIPRITTSCADLDNLLGGGINVSEVTEIGGVPGIGKT 120
             +GS +++NGA+ AWDMLH+E+ +PRITTSC+DLDN+LGGGI+  +VTEIGGVPGIGKT
Sbjct: 82  CCNGSRSLINGAKNAWDMLHEEESLPRITTSCSDLDNILGGGISCRDVTEIGGVPGIGKT 141

Query: 121 QLGIQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAI 180
           Q+GIQL+VNVQIP   GG+GGKA+YIDTEGSFMVERALQIAEAC+EDM +Y+  + K+  
Sbjct: 142 QIGIQLSVNVQIPRECGGLGGKAIYIDTEGSFMVERALQIAEACVEDMEEYTGYMHKHFQ 201

Query: 181 PHQIQIEPKDILENIFYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFD 240
            +Q+Q++P+DILENIFYFRVCSYTEQIAL+N+L+KFI+E+KDVKVVIVDS+TFHFRQ++D
Sbjct: 202 ANQVQMKPEDILENIFYFRVCSYTEQIALVNHLEKFISENKDVKVVIVDSITFHFRQDYD 261

Query: 241 DLALRTRLLSEMALKFMKLAKKFSLAVVLFNQVTTKFAEGSFQLTLALGMSF 293
           DLA RTR+LSEMALKFMKLAKKFSLAVVL NQVTTKF+EGSFQL LALG S+
Sbjct: 262 DLAQRTRVLSEMALKFMKLAKKFSLAVVLLNQVTTKFSEGSFQLALALGDSW 309

[Close]
BLAST of CSPI03G09670 vs. TAIR 10
Match: AT2G45280.2 (RAS associated with diabetes protein 51C )

HSP 1 Score: 401.0 bits (1029), Expect = 8.3e-112
Identity = 209/316 (66.14%), Postives = 255/316 (80.70%), Query Frame = 0 

Query: 1   MEVGRLPISATLRGKLISSGYTTLSSLASVSPSDLAR----------------------- 60
           ME  RLP+S ++RGKLIS+GYT LSS+ASVS SDLAR                       
Sbjct: 22  MEAWRLPLSPSIRGKLISAGYTCLSSIASVSSSDLARGKFLLYPNLRRLESVARFSLIST 81

Query: 61  -ELEISNNEAFDVLKLASHGRGLDRSDGSGAIVNGAETAWDMLHKEQFIPRITTSCADLD 120
               I+  EAF++LKLA+        +GS +++NGA+ AWDMLH+E+ +PRITTSC+DLD
Sbjct: 82  DNANITEEEAFEILKLANQ----SCCNGSRSLINGAKNAWDMLHEEESLPRITTSCSDLD 141

Query: 121 NLLGGGINVSEVTEIGGVPGIGKTQLGIQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVER 180
           N+LGGGI+  +VTEIGGVPGIGKTQ+GIQL+VNVQIP   GG+GGKA+YIDTEGSFMVER
Sbjct: 142 NILGGGISCRDVTEIGGVPGIGKTQIGIQLSVNVQIPRECGGLGGKAIYIDTEGSFMVER 201

Query: 181 ALQIAEACIEDMSDYSVLLKKNAIPHQIQIEPKDILENIFYFRVCSYTEQIALINYLDKF 240
           ALQIAEAC+EDM +Y+  + K+   +Q+Q++P+DILENIFYFRVCSYTEQIAL+N+L+KF
Sbjct: 202 ALQIAEACVEDMEEYTGYMHKHFQANQVQMKPEDILENIFYFRVCSYTEQIALVNHLEKF 261

Query: 241 ITEHKDVKVVIVDSVTFHFRQNFDDLALRTRLLSEMALKFMKLAKKFSLAVVLFNQVTTK 293
           I+E+KDVKVVIVDS+TFHFRQ++DDLA RTR+LSEMALKFMKLAKKFSLAVVL NQVTTK
Sbjct: 262 ISENKDVKVVIVDSITFHFRQDYDDLAQRTRVLSEMALKFMKLAKKFSLAVVLLNQVTTK 321

[Close]
BLAST of CSPI03G09670 vs. TAIR 10
Match: AT3G22880.1 (DNA repair (Rad51) family protein )

HSP 1 Score: 112.1 bits (279), Expect = 7.7e-25
Identity = 80/219 (36.53%), Postives = 116/219 (52.97%), Query Frame = 0 

Query: 68  IVN-GAETAWDMLHKEQFIPRITTSCADLDNLLGGGINVSEVTEIGGVPGIGKTQLGIQL 127
           IVN G  T  D L K + + +ITT C  LD+LLGGGI  S +TE  G    GKTQL   L
Sbjct: 87  IVNFGYMTGSDALIKRKSVVKITTGCQALDDLLGGGIETSAITEAFGEFRSGKTQLAHTL 146

Query: 128 AVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAIPHQIQI 187
            V  Q+P    G  GK  YIDTEG+F  +R + IAE                    +  +
Sbjct: 147 CVTTQLPTNMKGGNGKVAYIDTEGTFRPDRIVPIAE--------------------RFGM 206

Query: 188 EPKDILENIFYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNF---DDLA 247
           +P  +L+NI Y R  +Y  Q  L+  L   ++E +  +++IVDS+   FR +F    +LA
Sbjct: 207 DPGAVLDNIIYARAYTYEHQYNLLLGLAAKMSE-EPFRILIVDSIIALFRVDFTGRGELA 266

Query: 248 LRTRLLSEMALKFMKLAKKFSLAVVLFNQVTTKFAEGSF 283
            R + L++M  + +K+A++F++AV + NQV      G F
Sbjct: 267 DRQQKLAQMLSRLIKIAEEFNVAVYMTNQVIADPGGGMF 284

[Close]
BLAST of CSPI03G09670 vs. TAIR 10
Match: AT5G20850.1 (RAS associated with diabetes protein 51 )

HSP 1 Score: 93.6 bits (231), Expect = 2.8e-19
Identity = 80/265 (30.19%), Postives = 124/265 (46.79%), Query Frame = 0 

Query: 15  KLISSGYTTLSSLASVSPSDLARELEISNNEAFDVLKLASHGRGLDRSDGSGAIVNGAET 74
           KL  +G  T+  +A     DL +   IS+ +   +++ AS             +  G  +
Sbjct: 43  KLRDAGLCTVEGVAYTPRKDLLQIKGISDAKVDKIVEAASK-----------LVPLGFTS 102

Query: 75  AWDMLHKEQFIPRITTSCADLDNLLGGGINVSEVTEIGGVPGIGKTQLGIQLAVNVQIPG 134
           A  +  + Q I +IT+   +LD +L GGI    +TE+ G    GKTQL   L V  Q+P 
Sbjct: 103 ASQLHAQRQEIIQITSGSRELDKVLEGGIETGSITELYGEFRSGKTQLCHTLCVTCQLPM 162

Query: 135 AFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAIPHQIQIEPKDILEN 194
             GG  GKA+YID EG+F  +R LQIA+                    +  +   D+LEN
Sbjct: 163 DQGGGEGKAMYIDAEGTFRPQRLLQIAD--------------------RFGLNGADVLEN 222

Query: 195 IFYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFD---DLALRTRLLSE 254
           + Y R  +   Q  L+      + E +   ++IVDS T  +R +F    +L+ R   L++
Sbjct: 223 VAYARAYNTDHQSRLLLEAASMMIETR-FALLIVDSATALYRTDFSGRGELSARQMHLAK 275

Query: 255 MALKFMKLAKKFSLAVVLFNQVTTK 277
                 KLA +F +AVV+ NQV  +
Sbjct: 283 FLRSLQKLADEFGVAVVITNQVVAQ 275

[Close]
BLAST of CSPI03G09670 vs. TAIR 10
Match: AT5G57450.1 (homolog of X-ray repair cross complementing 3 (XRCC3) )

HSP 1 Score: 92.4 bits (228), Expect = 6.3e-19
Identity = 67/212 (31.60%), Postives = 107/212 (50.47%), Query Frame = 0 

Query: 70  NGAETAWDMLHKEQFIPRITTSCADLDNLLGGGINVSEVTEIGGVPGIGKTQLGIQLAVN 129
           NG     ++L +     ++TT C  LD  L GGI+   +TEI    G GKTQL +QL++ 
Sbjct: 3   NGKIKPENLLRRSPTNRKLTTGCEILDGCLRGGISCDSLTEIVAESGCGKTQLCLQLSLC 62

Query: 130 VQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAIPHQIQIEPK 189
            Q+P + GG+ G ++Y+ +E  F   R  Q++       S+ S+    N  P        
Sbjct: 63  TQLPISHGGLNGSSLYLHSEFPFPFRRLHQLSHTF--HQSNPSIYANYNDNP-------- 122

Query: 190 DILENIFYFRVCSYTEQIALINYLDKFITEHK---DVKVVIVDSVTFHFRQNFD----DL 249
              +++F   V S      ++  +D F+   K    +K++++DSV   FR  FD    DL
Sbjct: 123 --CDHVFVQNVHSVDHLFDIMPRIDGFVGNSKTRFPLKLIVLDSVAALFRSEFDNTPSDL 182

Query: 250 ALRTRLLSEMALKFMKLAKKFSLAVVLFNQVT 275
             R+ L  +++ K  +LA KF LA+V+ NQVT
Sbjct: 183 KKRSSLFFKISGKLKQLASKFDLAIVITNQVT 202

The following BLAST results are available for this feature:
BLAST of CSPI03G09670 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8GXF06.0e-11571.58DNA repair protein RAD51 homolog 3 OS=Arabidopsis thaliana OX=3702 GN=RAD51C PE=... [more]
Q8R2J91.3e-5643.39DNA repair protein RAD51 homolog 3 OS=Cricetulus griseus OX=10029 GN=RAD51C PE=2... [more]
Q924H55.4e-5542.07DNA repair protein RAD51 homolog 3 OS=Mus musculus OX=10090 GN=Rad51c PE=2 SV=1[more]
O435025.9e-5442.76DNA repair protein RAD51 homolog 3 OS=Homo sapiens OX=9606 GN=RAD51C PE=1 SV=1[more]
Q54PJ74.6e-3844.50DNA repair protein RAD51 homolog 3 OS=Dictyostelium discoideum OX=44689 GN=rad51... [more]
BLAST of CSPI03G09670 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L3U22.8e-15599.32RECA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G126250 PE=4... [more]
A0A5A7U6C31.7e-15297.60DNA repair protein RAD51-like protein 3 isoform X3 OS=Cucumis melo var. makuwa O... [more]
A0A1S3AWE41.7e-15297.60DNA repair protein RAD51 homolog 3 isoform X3 OS=Cucumis melo OX=3656 GN=LOC1034... [more]
A0A1S3AVR12.1e-15095.32DNA repair protein RAD51 homolog 3 isoform X1 OS=Cucumis melo OX=3656 GN=LOC1034... [more]
A0A1S4DSI51.2e-14794.65DNA repair protein RAD51 homolog 3 isoform X2 OS=Cucumis melo OX=3656 GN=LOC1034... [more]
BLAST of CSPI03G09670 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004133923.15.7e-15599.32DNA repair protein RAD51 homolog 3 isoform X1 [Cucumis sativus][more]
XP_008438178.13.5e-15297.60PREDICTED: DNA repair protein RAD51 homolog 3 isoform X3 [Cucumis melo] >KAA0049... [more]
XP_008438177.14.2e-15095.32PREDICTED: DNA repair protein RAD51 homolog 3 isoform X1 [Cucumis melo][more]
XP_038879233.11.2e-14995.55DNA repair protein RAD51 homolog 3 isoform X1 [Benincasa hispida][more]
XP_016898928.12.6e-14794.65PREDICTED: DNA repair protein RAD51 homolog 3 isoform X2 [Cucumis melo][more]
BLAST of CSPI03G09670 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G45280.14.3e-11671.58RAS associated with diabetes protein 51C [more]
AT2G45280.28.3e-11266.14RAS associated with diabetes protein 51C [more]
AT3G22880.17.7e-2536.53DNA repair (Rad51) family protein [more]
AT5G20850.12.8e-1930.19RAS associated with diabetes protein 51 [more]
AT5G57450.16.3e-1931.60homolog of X-ray repair cross complementing 3 (XRCC3) [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013632DNA recombination and repair protein Rad51-like, C-terminalPFAMPF08423Rad51coord: 71..278
e-value: 9.3E-42
score: 143.0
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 68..292
e-value: 2.9E-62
score: 212.5
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 85..279
IPR016467DNA recombination and repair protein, RecA-likePIRSFPIRSF005856Rad51coord: 1..289
e-value: 5.6E-75
score: 250.3
NoneNo IPR availablePANTHERPTHR46239DNA REPAIR PROTEIN RAD51 HOMOLOG 3 RAD51Ccoord: 1..292
IPR020588DNA recombination and repair protein RecA-like, ATP-binding domainPROSITEPS50162RECA_2coord: 84..273
score: 55.507504
IPR033925Rad51/DMC1/RadACDDcd01123Rad51_DMC1_radAcoord: 88..289
e-value: 1.25137E-74
score: 226.311

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI03G09670.1CSPI03G09670.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007143 female meiotic nuclear division
biological_process GO:0007140 male meiotic nuclear division
biological_process GO:0000707 meiotic DNA recombinase assembly
biological_process GO:0007131 reciprocal meiotic recombination
biological_process GO:0016444 somatic cell DNA recombination
biological_process GO:0006281 DNA repair
cellular_component GO:0033063 Rad51B-Rad51C-Rad51D-XRCC2 complex
cellular_component GO:0033065 Rad51C-XRCC3 complex
cellular_component GO:0005657 replication fork
molecular_function GO:0005524 ATP binding
molecular_function GO:0008094 ATP-dependent activity, acting on DNA
molecular_function GO:0008821 crossover junction endodeoxyribonuclease activity
molecular_function GO:0000400 four-way junction DNA binding
molecular_function GO:0003677 DNA binding