CSPI03G07520 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI03G07520
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	heterogeneous nuclear ribonucleoprotein Q-like
Location	Chr3: 6601217 .. 6605469 (+)
RNA-Seq Expression	CSPI03G07520
Synteny	CSPI03G07520

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGATGGTTCAGAAGTCGAGGAGCGGGTGGATCTTGAAGAGGACAATTACATGGAAGAGATGGATGATGATGTAGAGGAACATGTAGATGAGGATGGAGTAGATAGGAGAGCTGGTGAACTGCCCGAAGAGGATGTTGAAGAAGTAAGCGAAGAGCCTCAAGTTGGGACCGACACGGAAGATAAATTTTCAGATGATAGAAATAACTTATCCGTAGAATCTATAGAAAATAGAGAAAAGTCATCTTCTTTATTAGATGAAGATGATCTTGAGAAGCATGCTCAGCTTCTTGCCCTTCCTCCTCATGGATCTGAAGTTTTTATTGGTGGACTTTCACGTGATGTCTTAGAAGAAGATTTGAGAGATATGTGTGAATCCCTAGGAGAAATATTTGAGGTCTGCACTTTTTATTCTCTCTCGTGCTCTTTCTTTCTTCCTTTCTTTGAACCTTTGATTTTAGAGGTACGTTCTGTAACACAATTGTTTTGCAGATAAGGATAATAAAAGACAAAGATTCGGGTGAAAGCAAAGGTTATGCTTTTATAGCGTTTAAAACCAAAGAGGCAGCACAAAAGGCTATAGAGGATTTGCATGGTAAAGAAGTCAAGGTAGTTGTGGGATTCCTCAAGACTTTGATGTCCTTGTTACTTTATTATGTTTCAAAAGCATCAAAGCTGCTCTTTTCACATCTCCATCCATCATCGATAAATTTAAAATTGATTTTAGTTCATCCTTCACAATACAGGGTAAAACGATACGGTGTTCTCTGTCGGATTCTAAACACAGACTATTTATTGGTAATGTCCCAAAAAGTTGGACAGATGATGAGTTTAGGAGACTTATAGAAGGGGTTGGCCCTGGAGTTGAAAACATTGAGCTTATTAAGGTGAAGTTGCAAATTTATACATCTACCTTTTCAGAAATCAATGGTTATTGAGGCTTTATGTGCTTTATTCTGTATAACCTACTGCAGGATCCTCAAAACCCAAACCGAAATCGTGGATTTGCATTTGTTCTGTATTATAACAATGCCTGTGCTGATTATTCAAGGCAGAAAATGTCGAGTGCAAATTTTAAGCTGGATGGAAATTCCCCAACTGTTAGTTGGGCTGATCCAAAAAGTATGCCCGATAACTCTGCTGCTGCTCAGGTAATCAAGTTATCATGACTGGAGAAAATTATATGGGATCTGCATGGCATTTTCAAGTACCTTGAGATTTTATATCAACTGGAATTTTGTTAAAAACTGTGGTACTAAGGTTAAAAGAGTAAACCAAAACTGTTAATGGGCAGAGAAAAGTCCTTCGTGCTGTTTTGTTTTTTCAATTTCAATTTCAATTACTAAGCAAGGCAACCAAATTTGAAATATTCGAGCCATAAAAATATATCGATTGACCAATTGAACTTTGAGTAAGGAAATGTGGTTATAAACTTATAAAGATGGTTATCTTGGTGATTTTGAATCAAATTGCCTAAATTCCTCTTTGACCCAAGCTCAGTACAAAACCTTGAACAGAATAGTCTGGTGCACCTCACTAATCCTCTAGTTGGCTACTGACAAACTTTAGTGAATTATAACTATCATTTTTAACAAGCCATTAGTCTACTCTTATGCCGTAGTTAAATGAAGTAAAGAAAGGAAAACCTAAACATATAGCTTTTGGTTCTCCTTTGTTCAACCTTCTCACCTATAGATGCTCCTGCTCTCCCACAATAACTTATAAGGAATACTGAAATAAAACTGAAGATGAAATAGTAATAATTATATGTTCTTGAACATTCTTCCATTTCTCTCCATGAAAGCTGAGATTTTTTAAAATAATAATAACTAACTACAAGGTAACATGATTAAGTGCATGAATGACAAAAGTTAATTTTTTAGGTTGTCTTCTGGAAAATCTCTCTCTAGGAAAGAACATTTAGTGCACCACCTTGGTAAACATGTTTCCAATTGTTCCATCTTTGTAACCTTTAAATTTTTTTAAGAAACGGAGACAATCCTTTTTATTAATTATAAATGAGACTAATTACCGAAGAACAAGAGTAAGAGCAAAAAAAGAAAACAATTCATCCAACAAACGAAACAAAGATGAACTCTGGCAATAGAAATATGAAAACGACCTACAAACGATCACAAAGAAGAAACAACGAAAGAACCAAAGTAACAAAGAACTGAAACATTAGTAAAGAGTTTAAACACTTGTCGAAAAGCGCCCACTTCAGACTGAAATTTTGTACTCCACATGCTTCAGTTTGAAAGAAGGGAACCCCAAGAAGAGGCAATTGGCTGCTTCAAAACTATCCAACCCAAATAGTTCTTTTAATATTTAATGGGATTTCGCAAGACTGGGAATGAGAGCGAGTAAAGCACTAAGATTGGTCTCTAGAAGCTCAAAATGACCCTACCTCTCAAACTCAACTGACTTCTTATAATGAGCCATCTTCTCACTACTGACACCAAAAGGAGAGTCAAAAGAAGACTCACCTTTTTTTTTTGAGGAAATGCTTGGGATGCAGAGTGAACCTCTCAAAAACTTCACCTTAGAGTTGGGCAAAGAAAAAGCAGAATGCTTAAAGTTAAAACGGTGGAGGAAGAAGAGATCGTGAAGCTGACTCCGGTAGAAGGGGTTGGAACAAGTGCTTGGGTGCAGCTAACATCCAATAAGTCAGGGTTCAAATCAGAAATCAACATGGCTTTGGTAACATTCTTTTTGGGGAAGCCCTTTGCTCTCTTTTTTCTTACAAAATGATTAAGGAATGGTTTGAAGAGGTGAGGGAAAACTCGATCTTTTTCATTATGACTGTCTATTGAGGTGTACTTGAAAGAATTGAATTATAATATGAAATAAAATTTAGTCTCCATTACAGGAAGATATTTAAAAGCACATGATAGTTTGGTACTACATTGTAATTGGCGAAGTCTTTTAAACGCTTGTTTTGTATTGGCATTGACTTCCTGGTTTTATTTATTTGTGCTAGCAAGTTATTATTGATCTACAACTTTATGGATTGCAGGTGAAGGCTCTTTATGTGAAAAACATTCCCGAGAATACTACTACTGAGCAACTGAAAGAATTGTTTCAGCAGCATGGGGAAGTGACAAAAGTGAATATGCCACCTGGCAAAGCTGGGAGTAGTAAACGGGATTTTGCATTCATCCATTATGCTGAGAGGTCAAGTGCATTGAAGGCTGTCAAAGAGACAGAGAAATATGAAATTGAAGGTTTAGTTTTTATATTCTTGGAGATTTACATTTTATATCTCAAATGAACAATAACATTCCCTGTTCTTTAGGAAGAAAACGTTAAAACATATTTTGGCTTTTATTTCTATTGGTTGATGCACCCGTGAGCCAATCTTTTTCTGACAGCTTGTTGAATTATTTTATCTCTATTTACTGAATTGGACGATCTGTTCAACTTATGTGTGGAATTTCATTTACAGCATATCCTCAACATTTAAAAGTAAAGTAGGATGAATCACCAGCAGTCAAGTTGTCTAAACAGATCTTTTGTATTTGACAATGTTTTATAAAGAGAAATGCTTTGTTTTAACTTTTTTCTTGCAATTGCAACCCAAAGGATAATCTTCAGAGATTTTAATCTGCAGGCCAACTTTTGGAGGTTGTCCTTGCAAAGCCTCAAAGTGATAAAAAATCAGATGGGGCCTATTCCCATATATCTGGAAGTTATCCCAACCATCTTCTTCATGGTGGATACGGTGGTTATGGTGGAAATCCATATGGTTCCCTAGGTGGGTATGGTGTTACTGCTGGCTTCCATCAGGTAAATTTTTTTTCTTTCTTATCTAAAAAAGTTATATTGCGTCATCTCAGTTAGGTGCATCTCCCAAAGTGAAAAGAAAAGAAATATAAATTTCTTTTTTCCTCGACATTAATCTCATGGATTTTTTTTTCCATGTAACAGCCAATGATTTATGGTAGGGGACCAATGCCGGCGGGAATGCAGATGGTACCAATGGTTTTACCAGATGGTCGAATTGGTTATGTTCTGTAAGATATCACCCTTAATGGTTCGAAGTCCATTTTATCTATATAATCTATATATATATAATTGTAAATTGTATATATTGTCACTTATGAATGCAGTCAGCAACCTGGAGTACCAATGCCCCCCTCTCGATCTCGAAGAAGTGAGAGGAGCAATGGATCAGGTGGAACAATGGGTCGTTCAGGAGGTAGTAGCAGTAGTGATGATGTCAACCGTGGCAGAAGGTATCGGCCCTATTAA

mRNA sequence

ATGGCAGATGGTTCAGAAGTCGAGGAGCGGGTGGATCTTGAAGAGGACAATTACATGGAAGAGATGGATGATGATGTAGAGGAACATGTAGATGAGGATGGAGTAGATAGGAGAGCTGGTGAACTGCCCGAAGAGGATGTTGAAGAAGTAAGCGAAGAGCCTCAAGTTGGGACCGACACGGAAGATAAATTTTCAGATGATAGAAATAACTTATCCGTAGAATCTATAGAAAATAGAGAAAAGTCATCTTCTTTATTAGATGAAGATGATCTTGAGAAGCATGCTCAGCTTCTTGCCCTTCCTCCTCATGGATCTGAAGTTTTTATTGGTGGACTTTCACGTGATGTCTTAGAAGAAGATTTGAGAGATATGTGTGAATCCCTAGGAGAAATATTTGAGATAAGGATAATAAAAGACAAAGATTCGGGTGAAAGCAAAGGTTATGCTTTTATAGCGTTTAAAACCAAAGAGGCAGCACAAAAGGCTATAGAGGATTTGCATGGTAAAGAAGTCAAGGGTAAAACGATACGGTGTTCTCTGTCGGATTCTAAACACAGACTATTTATTGGTAATGTCCCAAAAAGTTGGACAGATGATGAGTTTAGGAGACTTATAGAAGGGGTTGGCCCTGGAGTTGAAAACATTGAGCTTATTAAGGATCCTCAAAACCCAAACCGAAATCGTGGATTTGCATTTGTTCTGTATTATAACAATGCCTGTGCTGATTATTCAAGGCAGAAAATGTCGAGTGCAAATTTTAAGCTGGATGGAAATTCCCCAACTGTTAGTTGGGCTGATCCAAAAAGTATGCCCGATAACTCTGCTGCTGCTCAGGTGAAGGCTCTTTATGTGAAAAACATTCCCGAGAATACTACTACTGAGCAACTGAAAGAATTGTTTCAGCAGCATGGGGAAGTGACAAAAGTGAATATGCCACCTGGCAAAGCTGGGAGTAGTAAACGGGATTTTGCATTCATCCATTATGCTGAGAGGTCAAGTGCATTGAAGGCTGTCAAAGAGACAGAGAAATATGAAATTGAAGGCCAACTTTTGGAGGTTGTCCTTGCAAAGCCTCAAAGTGATAAAAAATCAGATGGGGCCTATTCCCATATATCTGGAAGTTATCCCAACCATCTTCTTCATGGTGGATACGGTGGTTATGGTGGAAATCCATATGGTTCCCTAGGTGGGTATGGTGTTACTGCTGGCTTCCATCAGCCAATGATTTATGGTAGGGGACCAATGCCGGCGGGAATGCAGATGGTACCAATGGTTTTACCAGATGGTCGAATTGGTTATGTTCTTCAGCAACCTGGAGTACCAATGCCCCCCTCTCGATCTCGAAGAAGTGAGAGGAGCAATGGATCAGGTGGAACAATGGGTCGTTCAGGAGGTAGTAGCAGTAGTGATGATGTCAACCGTGGCAGAAGGTATCGGCCCTATTAA

Coding sequence (CDS)

ATGGCAGATGGTTCAGAAGTCGAGGAGCGGGTGGATCTTGAAGAGGACAATTACATGGAAGAGATGGATGATGATGTAGAGGAACATGTAGATGAGGATGGAGTAGATAGGAGAGCTGGTGAACTGCCCGAAGAGGATGTTGAAGAAGTAAGCGAAGAGCCTCAAGTTGGGACCGACACGGAAGATAAATTTTCAGATGATAGAAATAACTTATCCGTAGAATCTATAGAAAATAGAGAAAAGTCATCTTCTTTATTAGATGAAGATGATCTTGAGAAGCATGCTCAGCTTCTTGCCCTTCCTCCTCATGGATCTGAAGTTTTTATTGGTGGACTTTCACGTGATGTCTTAGAAGAAGATTTGAGAGATATGTGTGAATCCCTAGGAGAAATATTTGAGATAAGGATAATAAAAGACAAAGATTCGGGTGAAAGCAAAGGTTATGCTTTTATAGCGTTTAAAACCAAAGAGGCAGCACAAAAGGCTATAGAGGATTTGCATGGTAAAGAAGTCAAGGGTAAAACGATACGGTGTTCTCTGTCGGATTCTAAACACAGACTATTTATTGGTAATGTCCCAAAAAGTTGGACAGATGATGAGTTTAGGAGACTTATAGAAGGGGTTGGCCCTGGAGTTGAAAACATTGAGCTTATTAAGGATCCTCAAAACCCAAACCGAAATCGTGGATTTGCATTTGTTCTGTATTATAACAATGCCTGTGCTGATTATTCAAGGCAGAAAATGTCGAGTGCAAATTTTAAGCTGGATGGAAATTCCCCAACTGTTAGTTGGGCTGATCCAAAAAGTATGCCCGATAACTCTGCTGCTGCTCAGGTGAAGGCTCTTTATGTGAAAAACATTCCCGAGAATACTACTACTGAGCAACTGAAAGAATTGTTTCAGCAGCATGGGGAAGTGACAAAAGTGAATATGCCACCTGGCAAAGCTGGGAGTAGTAAACGGGATTTTGCATTCATCCATTATGCTGAGAGGTCAAGTGCATTGAAGGCTGTCAAAGAGACAGAGAAATATGAAATTGAAGGCCAACTTTTGGAGGTTGTCCTTGCAAAGCCTCAAAGTGATAAAAAATCAGATGGGGCCTATTCCCATATATCTGGAAGTTATCCCAACCATCTTCTTCATGGTGGATACGGTGGTTATGGTGGAAATCCATATGGTTCCCTAGGTGGGTATGGTGTTACTGCTGGCTTCCATCAGCCAATGATTTATGGTAGGGGACCAATGCCGGCGGGAATGCAGATGGTACCAATGGTTTTACCAGATGGTCGAATTGGTTATGTTCTTCAGCAACCTGGAGTACCAATGCCCCCCTCTCGATCTCGAAGAAGTGAGAGGAGCAATGGATCAGGTGGAACAATGGGTCGTTCAGGAGGTAGTAGCAGTAGTGATGATGTCAACCGTGGCAGAAGGTATCGGCCCTATTAA

Protein sequence

MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEEPQVGTDTEDKFSDDRNNLSVESIENREKSSSLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVLEEDLRDMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVKGKTIRCSLSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYYNNACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQVKALYVKNIPENTTTEQLKELFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQSDKKSDGAYSHISGSYPNHLLHGGYGGYGGNPYGSLGGYGVTAGFHQPMIYGRGPMPAGMQMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGTMGRSGGSSSSDDVNRGRRYRPY*

Homology

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BLAST of CSPI03G07520 vs. ExPASy Swiss-Prot
Match: Q9ASP6 (Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana OX=3702 GN=LIF2 PE=1 SV=1)

HSP 1 Score: 581.3 bits (1497), Expect = 1.0e-164
Identity = 315/500 (63.00%), Postives = 392/500 (78.40%), Query Frame = 0


Query: 1   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDV-EEVSEEPQV--- 60
           M+D  + ++RVD EE +Y  EM+D+VEE   E+  +    +  ++DV  + +EE +V   
Sbjct: 1   MSDARDNDDRVDFEEGSY-SEMEDEVEEEQVEEYEEEEEEDDDDDDVGNQNAEEREVEDY 60

Query: 61  ----GTDTEDK----FSDDRNNLSVESIENREKSSSLLDEDDLEKHAQLLALPPHGSEVF 120
               G D ED       DD N++ +E+ ++ EK  S +D++D EK++ LL+LPPHGSEVF
Sbjct: 61  GDTKGGDMEDVQEEIAEDDDNHIDIETADDDEKPPSPIDDEDREKYSHLLSLPPHGSEVF 120

Query: 121 IGGLSRDVLEEDLRDMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHG 180
           IGGL RDV EEDLRD+CE +GEIFE+R++KD+DSG+SKGYAF+AFKTK+ AQKAIE+LH 
Sbjct: 121 IGGLPRDVGEEDLRDLCEEIGEIFEVRLMKDRDSGDSKGYAFVAFKTKDVAQKAIEELHS 180

Query: 181 KEVKGKTIRCSLSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNR 240
           KE KGKTIRCSLS++K+RLFIGN+PK+WT+DEFR++IE VGPGVENIELIKDP N  RNR
Sbjct: 181 KEFKGKTIRCSLSETKNRLFIGNIPKNWTEDEFRKVIEDVGPGVENIELIKDPTNTTRNR 240

Query: 241 GFAFVLYYNNACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNS-AAAQVKALYVKNI 300
           GFAFVLYYNNACADYSRQKM  +NFKL+GN+PTV+WADPKS P++S AAAQVKALYVKNI
Sbjct: 241 GFAFVLYYNNACADYSRQKMIDSNFKLEGNAPTVTWADPKSSPEHSAAAAQVKALYVKNI 300

Query: 301 PENTTTEQLKELFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIE 360
           PENT+TEQLKELFQ+HGEVTK+  PPGK G  KRDF F+HYAERSSALKAVK+TE+YE+ 
Sbjct: 301 PENTSTEQLKELFQRHGEVTKIVTPPGKGG--KRDFGFVHYAERSSALKAVKDTERYEVN 360

Query: 361 GQLLEVVLAKPQSDKKSD-GAYSHISGSYPNHLLHGGYGGYGGNPYGSLG-GYGVTAGFH 420
           GQ LEVVLAKPQ+++K D  +YS+ +   P   +H  +GG+   PYG++G G G+   F 
Sbjct: 361 GQPLEVVLAKPQAERKHDPSSYSYGAAPTPAPFVHPTFGGFAAAPYGAMGAGLGIAGSFS 420

Query: 421 QPMIYGRGPMPAGMQMVPMVLPDGRIGYVLQQPGVPM---PPSRSRRSERSNGSGGTMGR 480
           QPMIYGRG MP GMQMVPM+LPDGR+GYVLQQPG+PM   PP R RR++R+NGS G  GR
Sbjct: 421 QPMIYGRGAMPTGMQMVPMLLPDGRVGYVLQQPGMPMAAAPPQRPRRNDRNNGSSGGSGR 480

Query: 481 SGGSSSSDDVNR-GRRYRPY 482
              +S   D NR GRRYRPY
Sbjct: 481 D--NSHEHDGNRGGRRYRPY 495

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BLAST of CSPI03G07520 vs. ExPASy Swiss-Prot
Match: O43390 (Heterogeneous nuclear ribonucleoprotein R OS=Homo sapiens OX=9606 GN=HNRNPR PE=1 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 1.2e-46
Identity = 136/421 (32.30%), Postives = 211/421 (50.12%), Query Frame = 0


Query: 101 PPHGSEVFIGGLSRDVLEEDLRDMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQ 160
           P  G+EVF+G + RD+ E++L  + E  G I+++R++ D  SG+++GYAFI F  KEAAQ
Sbjct: 161 PGIGTEVFVGKIPRDLYEDELVPLFEKAGPIWDLRLMMDPLSGQNRGYAFITFCGKEAAQ 220

Query: 161 KAIEDLHGKEVK-GKTIRCSLSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIK 220
           +A++     E++ GK +   +S + +RLF+G++PK+ T +        V  G+ ++ L  
Sbjct: 221 EAVKLCDSYEIRPGKHLGVCISVANNRLFVGSIPKNKTKENILEEFSKVTEGLVDVILYH 280

Query: 221 DPQNPNRNRGFAFVLYYNNACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQV 280
            P +  +NRGF F+ Y ++  A  +R+++ S   K+ GN  TV WADP   PD    A+V
Sbjct: 281 QPDDKKKNRGFCFLEYEDHKSAAQARRRLMSGKVKVWGNVVTVEWADPVEEPDPEVMAKV 340

Query: 281 KALYVKNIPENTTTEQLKELFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVK 340
           K L+V+N+    T E L++ F + G++ +V           +D+AF+H+ +R +A+KA+ 
Sbjct: 341 KVLFVRNLATTVTEEILEKSFSEFGKLERV--------KKLKDYAFVHFEDRGAAVKAMD 400

Query: 341 ETEKYEIEGQLLEVVLAKPQSDKKSD---GAYSHISGSYPNHLLH--------------- 400
           E    EIEG+ +E+VLAKP   K+ +      +  S +Y ++  H               
Sbjct: 401 EMNGKEIEGEEIEIVLAKPPDKKRKERQAARQASRSTAYEDYYYHPPPRMPPPIRGRGRG 460

Query: 401 GGYGGYGGNP--------YGSLGGY---GVTAGFHQP--------MIYGRG--------- 460
           GG GGYG  P        Y    GY       G+  P         + GRG         
Sbjct: 461 GGRGGYGYPPDYYGYEDYYDDYYGYDYHDYRGGYEDPYYGYDDGYAVRGRGGGRGGRGAP 520

Query: 461 PMPAGMQMVPMVLPDGRIGYVLQQPGVPMPPSRSRR--------SERSNGSGGTMGRSGG 467
           P P G    P   P GR GY   Q G P+ P R  R         +R  GS G+ G  GG
Sbjct: 521 PPPRGRGAPP---PRGRAGY--SQRGAPLGPPRGSRGGRGGPAQQQRGRGSRGSRGNRGG 568

[Close]

BLAST of CSPI03G07520 vs. ExPASy Swiss-Prot
Match: Q7TP47 (Heterogeneous nuclear ribonucleoprotein Q OS=Rattus norvegicus OX=10116 GN=Syncrip PE=2 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 3.7e-45
Identity = 107/309 (34.63%), Postives = 176/309 (56.96%), Query Frame = 0


Query: 101 PPHGSEVFIGGLSRDVLEEDLRDMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQ 160
           P  G+E+F+G + RD+ E++L  + E  G I+++R++ D  +G ++GYAF+ F TKEAAQ
Sbjct: 68  PSVGTEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQ 127

Query: 161 KAIEDLHGKEVK-GKTIRCSLSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIK 220
           +A++  +  E++ GK I   +S + +RLF+G++PKS T ++       V  G+ ++ L  
Sbjct: 128 EAVKLYNNHEIRSGKHIGVCISVANNRLFVGSIPKSKTKEQILEEFSKVTEGLTDVILYH 187

Query: 221 DPQNPNRNRGFAFVLYYNNACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQV 280
            P +  +NRGF F+ Y ++  A  +R+++ S   K+ GN  TV WADP   PD    A+V
Sbjct: 188 QPDDKKKNRGFCFLEYEDHKTAAQARRRLMSGKVKVWGNVGTVEWADPIEDPDPEVMAKV 247

Query: 281 KALYVKNIPENTTTEQLKELFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVK 340
           K L+V+N+    T E L++ F Q G++ +V           +D+AFIH+ ER  A+KA++
Sbjct: 248 KVLFVRNLANTVTEEILEKSFSQFGKLERV--------KKLKDYAFIHFDERDGAVKAME 307

Query: 341 ETEKYEIEGQLLEVVLAKPQSDKKSD------GAYSHISGSY----PNHLL-------HG 392
           E    ++EG+ +E+V AKP   K+ +       A + +   Y    P H+         G
Sbjct: 308 EMNGKDLEGENIEIVFAKPPDQKRKERKAQRQAAKNQMYDDYYYYGPPHMPPPTRGRGRG 367

[Close]

BLAST of CSPI03G07520 vs. ExPASy Swiss-Prot
Match: O60506 (Heterogeneous nuclear ribonucleoprotein Q OS=Homo sapiens OX=9606 GN=SYNCRIP PE=1 SV=2)

HSP 1 Score: 175.6 bits (444), Expect = 1.3e-42
Identity = 127/396 (32.07%), Postives = 201/396 (50.76%), Query Frame = 0


Query: 101 PPHGSEVFIGGLSRDVLEEDLRDMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQ 160
           P  G+E+F+G + RD+ E++L  + E  G I+++R++ D  +G ++GYAF+ F TKEAAQ
Sbjct: 158 PSVGTEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQ 217

Query: 161 KAIEDLHGKEVK-GKTIRCSLSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIK 220
           +A++  +  E++ GK I   +S + +RLF+G++PKS T ++       V  G+ ++ L  
Sbjct: 218 EAVKLYNNHEIRSGKHIGVCISVANNRLFVGSIPKSKTKEQILEEFSKVTEGLTDVILYH 277

Query: 221 DPQNPNRNRGFAFVLYYNNACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQV 280
            P +  +NRGF F+ Y ++  A  +R+++ S   K+ GN  TV WADP   PD    A+V
Sbjct: 278 QPDDKKKNRGFCFLEYEDHKTAAQARRRLMSGKVKVWGNVGTVEWADPIEDPDPEVMAKV 337

Query: 281 KALYVKNIPENTTTEQLKELFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVK 340
           K L+V+N+    T E L++ F Q G++ +V           +D+AFIH+ ER  A+KA++
Sbjct: 338 KVLFVRNLANTVTEEILEKAFSQFGKLERV--------KKLKDYAFIHFDERDGAVKAME 397

Query: 341 ETEKYEIEGQLLEVVLAKPQSDKKSD------GAYSHISGSY----PNHLL-------HG 400
           E    ++EG+ +E+V AKP   K+ +       A + +   Y    P H+         G
Sbjct: 398 EMNGKDLEGENIEIVFAKPPDQKRKERKAQRQAAKNQMYDDYYYYGPPHMPPPTRGRGRG 457

Query: 401 GYGGYGGNP-------YGSLGGY---GVTAGFHQPMIYGRGPMPAGMQMVPMVLPDGRIG 460
           G GGYG  P       Y    GY       G+  P  YG      G +        GR G
Sbjct: 458 GRGGYGYPPDYYGYEDYYDYYGYDYHNYRGGYEDP-YYGYEDFQVGAR--------GRGG 517

Query: 461 YVLQQPGVPMPPSRSRRSERSNGSGGTMGRSGGSSS 469
               +      PSR R +    G  G   R G  S+
Sbjct: 518 ----RGARGAAPSRGRGAAPPRGRAGYSQRGGPGSA 532

[Close]

BLAST of CSPI03G07520 vs. ExPASy Swiss-Prot
Match: Q7TMK9 (Heterogeneous nuclear ribonucleoprotein Q OS=Mus musculus OX=10090 GN=Syncrip PE=1 SV=2)

HSP 1 Score: 175.3 bits (443), Expect = 1.7e-42
Identity = 127/396 (32.07%), Postives = 201/396 (50.76%), Query Frame = 0


Query: 101 PPHGSEVFIGGLSRDVLEEDLRDMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQ 160
           P  G+E+F+G + RD+ E++L  + E  G I+++R++ D  +G ++GYAF+ F TKEAAQ
Sbjct: 158 PSVGTEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQ 217

Query: 161 KAIEDLHGKEVK-GKTIRCSLSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIK 220
           +A++  +  E++ GK I   +S + +RLF+G++PKS T ++       V  G+ ++ L  
Sbjct: 218 EAVKLYNNHEIRSGKHIGVCISVANNRLFVGSIPKSKTKEQILEEFSKVTEGLTDVILYH 277

Query: 221 DPQNPNRNRGFAFVLYYNNACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQV 280
            P +  +NRGF F+ Y ++  A  +R+++ S   K+ GN  TV WADP   PD    A+V
Sbjct: 278 QPDDKKKNRGFCFLEYEDHKTAAQARRRLMSGKVKVWGNVGTVEWADPIEDPDPEVMAKV 337

Query: 281 KALYVKNIPENTTTEQLKELFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVK 340
           K L+V+N+    T E L++ F Q G++ +V           +D+AFIH+ ER  A+KA++
Sbjct: 338 KVLFVRNLANTVTEEILEKSFSQFGKLERV--------KKLKDYAFIHFDERDGAVKAME 397

Query: 341 ETEKYEIEGQLLEVVLAKPQSDKKSD------GAYSHISGSY----PNHLL-------HG 400
           E    ++EG+ +E+V AKP   K+ +       A + +   Y    P H+         G
Sbjct: 398 EMNGKDLEGENIEIVFAKPPDQKRKERKAQRQAAKNQMYDDYYYYGPPHMPPPTRGRGRG 457

Query: 401 GYGGYGGNP-------YGSLGGY---GVTAGFHQPMIYGRGPMPAGMQMVPMVLPDGRIG 460
           G GGYG  P       Y    GY       G+  P  YG      G +        GR G
Sbjct: 458 GRGGYGYPPDYYGYEDYYDYYGYDYHNYRGGYEDP-YYGYEDFQVGAR--------GRGG 517

Query: 461 YVLQQPGVPMPPSRSRRSERSNGSGGTMGRSGGSSS 469
               +      PSR R +    G  G   R G  S+
Sbjct: 518 ----RGARGAAPSRGRGAAPPRGRAGYSQRGGPGSA 532

[Close]

BLAST of CSPI03G07520 vs. ExPASy TrEMBL
Match: A0A1S3AUX7 (heterogeneous nuclear ribonucleoprotein R isoform X2 OS=Cucumis melo OX=3656 GN=LOC103483143 PE=4 SV=1)

HSP 1 Score: 923.7 bits (2386), Expect = 3.2e-265
Identity = 474/482 (98.34%), Postives = 479/482 (99.38%), Query Frame = 0


Query: 1   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEEPQVGTDT 60
           MAD SEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEEPQVGTDT
Sbjct: 1   MADASEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEEPQVGTDT 60

Query: 61  EDKFS-DDRNNLSVESIENREKSSSLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVLEE 120
           EDKFS D RNNLSVESIENREKS+SLLDED+LEKHAQLLALPPHGSEVFIGGLSRDVLEE
Sbjct: 61  EDKFSGDGRNNLSVESIENREKSASLLDEDELEKHAQLLALPPHGSEVFIGGLSRDVLEE 120

Query: 121 DLRDMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVKGKTIRCS 180
           DLR+MCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVKGKTIRCS
Sbjct: 121 DLREMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVKGKTIRCS 180

Query: 181 LSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYYNNA 240
           LSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYYNNA
Sbjct: 181 LSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYYNNA 240

Query: 241 CADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQVKALYVKNIPENTTTEQLKEL 300
           CADYSRQKMSSANFKLDGNSPTVSWADPKSMPDN+AAAQVKALYVKNIPENTTTEQLKEL
Sbjct: 241 CADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNTAAAQVKALYVKNIPENTTTEQLKEL 300

Query: 301 FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ 360
           FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ
Sbjct: 301 FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ 360

Query: 361 SDKKSDGAYSHISGSYPNHLLHGGYGGYGGNPYGSLGGYGVTAGFHQPMIYGRGPMPAGM 420
           SDKKSDGAYSHISGSYPNHLLHGGYGGYGGNPYGS+GGYGVTAGFHQPMIYGRGPMPAGM
Sbjct: 361 SDKKSDGAYSHISGSYPNHLLHGGYGGYGGNPYGSIGGYGVTAGFHQPMIYGRGPMPAGM 420

Query: 421 QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGTMGRSGGSSSSDDVNRGRRYR 480
           QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGTMGRSGGSSSSDDVNRGRRYR
Sbjct: 421 QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGTMGRSGGSSSSDDVNRGRRYR 480

Query: 481 PY 482
           PY
Sbjct: 481 PY 482

[Close]

BLAST of CSPI03G07520 vs. ExPASy TrEMBL
Match: A0A1S3AUK8 (heterogeneous nuclear ribonucleoprotein R isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483143 PE=4 SV=1)

HSP 1 Score: 919.1 bits (2374), Expect = 7.8e-264
Identity = 474/483 (98.14%), Postives = 479/483 (99.17%), Query Frame = 0


Query: 1   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEEPQVGTDT 60
           MAD SEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEEPQVGTDT
Sbjct: 1   MADASEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEEPQVGTDT 60

Query: 61  EDKFS-DDRNNLSVESIENREKSSSLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVLEE 120
           EDKFS D RNNLSVESIENREKS+SLLDED+LEKHAQLLALPPHGSEVFIGGLSRDVLEE
Sbjct: 61  EDKFSGDGRNNLSVESIENREKSASLLDEDELEKHAQLLALPPHGSEVFIGGLSRDVLEE 120

Query: 121 DLRDMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVK-GKTIRC 180
           DLR+MCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVK GKTIRC
Sbjct: 121 DLREMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVKVGKTIRC 180

Query: 181 SLSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYYNN 240
           SLSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYYNN
Sbjct: 181 SLSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYYNN 240

Query: 241 ACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQVKALYVKNIPENTTTEQLKE 300
           ACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDN+AAAQVKALYVKNIPENTTTEQLKE
Sbjct: 241 ACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNTAAAQVKALYVKNIPENTTTEQLKE 300

Query: 301 LFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKP 360
           LFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKP
Sbjct: 301 LFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKP 360

Query: 361 QSDKKSDGAYSHISGSYPNHLLHGGYGGYGGNPYGSLGGYGVTAGFHQPMIYGRGPMPAG 420
           QSDKKSDGAYSHISGSYPNHLLHGGYGGYGGNPYGS+GGYGVTAGFHQPMIYGRGPMPAG
Sbjct: 361 QSDKKSDGAYSHISGSYPNHLLHGGYGGYGGNPYGSIGGYGVTAGFHQPMIYGRGPMPAG 420

Query: 421 MQMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGTMGRSGGSSSSDDVNRGRRY 480
           MQMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGTMGRSGGSSSSDDVNRGRRY
Sbjct: 421 MQMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGTMGRSGGSSSSDDVNRGRRY 480

Query: 481 RPY 482
           RPY
Sbjct: 481 RPY 483

[Close]

BLAST of CSPI03G07520 vs. ExPASy TrEMBL
Match: A0A5D3DB75 (Heterogeneous nuclear ribonucleoprotein R isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold291G00650 PE=4 SV=1)

HSP 1 Score: 913.7 bits (2360), Expect = 3.3e-262
Identity = 470/480 (97.92%), Postives = 476/480 (99.17%), Query Frame = 0


Query: 1   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEEPQVGTDT 60
           MAD SEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEEPQVGTDT
Sbjct: 1   MADASEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEEPQVGTDT 60

Query: 61  EDKFS-DDRNNLSVESIENREKSSSLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVLEE 120
           EDKFS D RNNLSVESIENREKS+SLLDED+LEKHAQLLALPPHGSEVFIGGLSRDVLEE
Sbjct: 61  EDKFSGDGRNNLSVESIENREKSASLLDEDELEKHAQLLALPPHGSEVFIGGLSRDVLEE 120

Query: 121 DLRDMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVKGKTIRCS 180
           DLR+MCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVKGKTIRCS
Sbjct: 121 DLREMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVKGKTIRCS 180

Query: 181 LSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYYNNA 240
           LSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYYNNA
Sbjct: 181 LSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYYNNA 240

Query: 241 CADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQVKALYVKNIPENTTTEQLKEL 300
           CADYSRQKMSSANFKLDGNSPTVSWADPKSMPDN+AAAQVKALYVKNIPENTTTEQLKEL
Sbjct: 241 CADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNTAAAQVKALYVKNIPENTTTEQLKEL 300

Query: 301 FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ 360
           FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ
Sbjct: 301 FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ 360

Query: 361 SDKKSDGAYSHISGSYPNHLLHGGYGGYGGNPYGSLGGYGVTAGFHQPMIYGRGPMPAGM 420
           SDKKSDGAYSHISGSYPNHLLHGGYGGYGGNPYGS+GGYGVTAGFHQPMIYGRGPMPAGM
Sbjct: 361 SDKKSDGAYSHISGSYPNHLLHGGYGGYGGNPYGSIGGYGVTAGFHQPMIYGRGPMPAGM 420

Query: 421 QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGTMGRSGGSSSSDDVNRGRRYR 480
           QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGTMGRSGGSSSSDDVNRGRR +
Sbjct: 421 QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGTMGRSGGSSSSDDVNRGRRVK 480

[Close]

BLAST of CSPI03G07520 vs. ExPASy TrEMBL
Match: A0A5A7TZ47 (Heterogeneous nuclear ribonucleoprotein R isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold171G00660 PE=4 SV=1)

HSP 1 Score: 909.1 bits (2348), Expect = 8.1e-261
Identity = 470/481 (97.71%), Postives = 476/481 (98.96%), Query Frame = 0


Query: 1   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEEPQVGTDT 60
           MAD SEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEEPQVGTDT
Sbjct: 1   MADASEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEEPQVGTDT 60

Query: 61  EDKFS-DDRNNLSVESIENREKSSSLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVLEE 120
           EDKFS D RNNLSVESIENREKS+SLLDED+LEKHAQLLALPPHGSEVFIGGLSRDVLEE
Sbjct: 61  EDKFSGDGRNNLSVESIENREKSASLLDEDELEKHAQLLALPPHGSEVFIGGLSRDVLEE 120

Query: 121 DLRDMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVK-GKTIRC 180
           DLR+MCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVK GKTIRC
Sbjct: 121 DLREMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVKVGKTIRC 180

Query: 181 SLSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYYNN 240
           SLSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYYNN
Sbjct: 181 SLSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYYNN 240

Query: 241 ACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQVKALYVKNIPENTTTEQLKE 300
           ACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDN+AAAQVKALYVKNIPENTTTEQLKE
Sbjct: 241 ACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNTAAAQVKALYVKNIPENTTTEQLKE 300

Query: 301 LFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKP 360
           LFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKP
Sbjct: 301 LFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKP 360

Query: 361 QSDKKSDGAYSHISGSYPNHLLHGGYGGYGGNPYGSLGGYGVTAGFHQPMIYGRGPMPAG 420
           QSDKKSDGAYSHISGSYPNHLLHGGYGGYGGNPYGS+GGYGVTAGFHQPMIYGRGPMPAG
Sbjct: 361 QSDKKSDGAYSHISGSYPNHLLHGGYGGYGGNPYGSIGGYGVTAGFHQPMIYGRGPMPAG 420

Query: 421 MQMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGTMGRSGGSSSSDDVNRGRRY 480
           MQMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGTMGRSGGSSSSDDVNRGRR 
Sbjct: 421 MQMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGTMGRSGGSSSSDDVNRGRRV 480

[Close]

BLAST of CSPI03G07520 vs. ExPASy TrEMBL
Match: A0A6J1E8S5 (heterogeneous nuclear ribonucleoprotein Q-like OS=Cucurbita moschata OX=3662 GN=LOC111431898 PE=4 SV=1)

HSP 1 Score: 871.7 bits (2251), Expect = 1.4e-249
Identity = 444/482 (92.12%), Postives = 461/482 (95.64%), Query Frame = 0


Query: 1   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEEPQVGTDT 60
           MADGSEVEERVDLEEDNYMEE+DDDVEEHVDEDGVDRR GE PE DVEEV EEP++GT+ 
Sbjct: 1   MADGSEVEERVDLEEDNYMEEIDDDVEEHVDEDGVDRRDGEHPEYDVEEVGEEPRIGTNQ 60

Query: 61  EDKFS-DDRNNLSVESIENREKSSSLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVLEE 120
           EDKFS D RNN S+ESIE  EKS+SLLDEDDLEKHAQLLALPPHGSE+FIGGLSRDV E+
Sbjct: 61  EDKFSGDGRNNASIESIEKIEKSTSLLDEDDLEKHAQLLALPPHGSEIFIGGLSRDVSED 120

Query: 121 DLRDMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVKGKTIRCS 180
           DLRD+CESLGEIFEIRIIKD+DSGESKGYAFI FKTKEAAQKAIEDLHGKEVKGKTIRCS
Sbjct: 121 DLRDLCESLGEIFEIRIIKDRDSGESKGYAFILFKTKEAAQKAIEDLHGKEVKGKTIRCS 180

Query: 181 LSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYYNNA 240
           LSDSKHRLFIGN+PKSWT+DEFRRLIEGVGPGVENIELIKDPQNP+RNRGFAFVLYYNNA
Sbjct: 181 LSDSKHRLFIGNIPKSWTEDEFRRLIEGVGPGVENIELIKDPQNPSRNRGFAFVLYYNNA 240

Query: 241 CADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQVKALYVKNIPENTTTEQLKEL 300
           CADYSRQKMS+ NFKLDGNSPTVSWADPKSMPDNSA AQVKALYVKNIPENTTTEQLKEL
Sbjct: 241 CADYSRQKMSNVNFKLDGNSPTVSWADPKSMPDNSAVAQVKALYVKNIPENTTTEQLKEL 300

Query: 301 FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ 360
           FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ
Sbjct: 301 FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ 360

Query: 361 SDKKSDGAYSHISGSYPNHLLHGGYGGYGGNPYGSLGGYGVTAGFHQPMIYGRGPMPAGM 420
           SDKKSDGAYSHISG  PNH+LHGGYGGYGGNPYGSLGGYGVTAGFHQP+IYGRGPMPAGM
Sbjct: 361 SDKKSDGAYSHISGGNPNHILHGGYGGYGGNPYGSLGGYGVTAGFHQPVIYGRGPMPAGM 420

Query: 421 QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGTMGRSGGSSSSDDVNRGRRYR 480
           QMVPMVLPDGRIGYVLQQPGVPMPPSR RRSERSNGSGG  GRSGGSSS D+ NRGRRYR
Sbjct: 421 QMVPMVLPDGRIGYVLQQPGVPMPPSRPRRSERSNGSGGPAGRSGGSSSGDETNRGRRYR 480

Query: 481 PY 482
           PY
Sbjct: 481 PY 482

[Close]

BLAST of CSPI03G07520 vs. NCBI nr
Match: XP_004133787.1 (heterogeneous nuclear ribonucleoprotein Q isoform X2 [Cucumis sativus] >KAE8650219.1 hypothetical protein Csa_010271 [Cucumis sativus])

HSP 1 Score: 939.5 bits (2427), Expect = 1.2e-269
Identity = 481/481 (100.00%), Postives = 481/481 (100.00%), Query Frame = 0


Query: 1   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEEPQVGTDT 60
           MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEEPQVGTDT
Sbjct: 1   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEEPQVGTDT 60

Query: 61  EDKFSDDRNNLSVESIENREKSSSLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVLEED 120
           EDKFSDDRNNLSVESIENREKSSSLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVLEED
Sbjct: 61  EDKFSDDRNNLSVESIENREKSSSLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVLEED 120

Query: 121 LRDMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVKGKTIRCSL 180
           LRDMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVKGKTIRCSL
Sbjct: 121 LRDMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVKGKTIRCSL 180

Query: 181 SDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYYNNAC 240
           SDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYYNNAC
Sbjct: 181 SDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYYNNAC 240

Query: 241 ADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQVKALYVKNIPENTTTEQLKELF 300
           ADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQVKALYVKNIPENTTTEQLKELF
Sbjct: 241 ADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQVKALYVKNIPENTTTEQLKELF 300

Query: 301 QQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQS 360
           QQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQS
Sbjct: 301 QQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQS 360

Query: 361 DKKSDGAYSHISGSYPNHLLHGGYGGYGGNPYGSLGGYGVTAGFHQPMIYGRGPMPAGMQ 420
           DKKSDGAYSHISGSYPNHLLHGGYGGYGGNPYGSLGGYGVTAGFHQPMIYGRGPMPAGMQ
Sbjct: 361 DKKSDGAYSHISGSYPNHLLHGGYGGYGGNPYGSLGGYGVTAGFHQPMIYGRGPMPAGMQ 420

Query: 421 MVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGTMGRSGGSSSSDDVNRGRRYRP 480
           MVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGTMGRSGGSSSSDDVNRGRRYRP
Sbjct: 421 MVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGTMGRSGGSSSSDDVNRGRRYRP 480

Query: 481 Y 482
           Y
Sbjct: 481 Y 481

[Close]

BLAST of CSPI03G07520 vs. NCBI nr
Match: XP_011650655.1 (heterogeneous nuclear ribonucleoprotein Q isoform X1 [Cucumis sativus] >XP_011650656.1 heterogeneous nuclear ribonucleoprotein Q isoform X1 [Cucumis sativus])

HSP 1 Score: 934.9 bits (2415), Expect = 2.8e-268
Identity = 481/482 (99.79%), Postives = 481/482 (99.79%), Query Frame = 0


Query: 1   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEEPQVGTDT 60
           MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEEPQVGTDT
Sbjct: 1   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEEPQVGTDT 60

Query: 61  EDKFSDDRNNLSVESIENREKSSSLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVLEED 120
           EDKFSDDRNNLSVESIENREKSSSLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVLEED
Sbjct: 61  EDKFSDDRNNLSVESIENREKSSSLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVLEED 120

Query: 121 LRDMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVK-GKTIRCS 180
           LRDMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVK GKTIRCS
Sbjct: 121 LRDMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVKVGKTIRCS 180

Query: 181 LSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYYNNA 240
           LSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYYNNA
Sbjct: 181 LSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYYNNA 240

Query: 241 CADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQVKALYVKNIPENTTTEQLKEL 300
           CADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQVKALYVKNIPENTTTEQLKEL
Sbjct: 241 CADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQVKALYVKNIPENTTTEQLKEL 300

Query: 301 FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ 360
           FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ
Sbjct: 301 FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ 360

Query: 361 SDKKSDGAYSHISGSYPNHLLHGGYGGYGGNPYGSLGGYGVTAGFHQPMIYGRGPMPAGM 420
           SDKKSDGAYSHISGSYPNHLLHGGYGGYGGNPYGSLGGYGVTAGFHQPMIYGRGPMPAGM
Sbjct: 361 SDKKSDGAYSHISGSYPNHLLHGGYGGYGGNPYGSLGGYGVTAGFHQPMIYGRGPMPAGM 420

Query: 421 QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGTMGRSGGSSSSDDVNRGRRYR 480
           QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGTMGRSGGSSSSDDVNRGRRYR
Sbjct: 421 QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGTMGRSGGSSSSDDVNRGRRYR 480

Query: 481 PY 482
           PY
Sbjct: 481 PY 482

[Close]

BLAST of CSPI03G07520 vs. NCBI nr
Match: XP_008437831.1 (PREDICTED: heterogeneous nuclear ribonucleoprotein R isoform X2 [Cucumis melo])

HSP 1 Score: 923.7 bits (2386), Expect = 6.5e-265
Identity = 474/482 (98.34%), Postives = 479/482 (99.38%), Query Frame = 0


Query: 1   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEEPQVGTDT 60
           MAD SEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEEPQVGTDT
Sbjct: 1   MADASEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEEPQVGTDT 60

Query: 61  EDKFS-DDRNNLSVESIENREKSSSLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVLEE 120
           EDKFS D RNNLSVESIENREKS+SLLDED+LEKHAQLLALPPHGSEVFIGGLSRDVLEE
Sbjct: 61  EDKFSGDGRNNLSVESIENREKSASLLDEDELEKHAQLLALPPHGSEVFIGGLSRDVLEE 120

Query: 121 DLRDMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVKGKTIRCS 180
           DLR+MCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVKGKTIRCS
Sbjct: 121 DLREMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVKGKTIRCS 180

Query: 181 LSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYYNNA 240
           LSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYYNNA
Sbjct: 181 LSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYYNNA 240

Query: 241 CADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQVKALYVKNIPENTTTEQLKEL 300
           CADYSRQKMSSANFKLDGNSPTVSWADPKSMPDN+AAAQVKALYVKNIPENTTTEQLKEL
Sbjct: 241 CADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNTAAAQVKALYVKNIPENTTTEQLKEL 300

Query: 301 FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ 360
           FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ
Sbjct: 301 FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ 360

Query: 361 SDKKSDGAYSHISGSYPNHLLHGGYGGYGGNPYGSLGGYGVTAGFHQPMIYGRGPMPAGM 420
           SDKKSDGAYSHISGSYPNHLLHGGYGGYGGNPYGS+GGYGVTAGFHQPMIYGRGPMPAGM
Sbjct: 361 SDKKSDGAYSHISGSYPNHLLHGGYGGYGGNPYGSIGGYGVTAGFHQPMIYGRGPMPAGM 420

Query: 421 QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGTMGRSGGSSSSDDVNRGRRYR 480
           QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGTMGRSGGSSSSDDVNRGRRYR
Sbjct: 421 QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGTMGRSGGSSSSDDVNRGRRYR 480

Query: 481 PY 482
           PY
Sbjct: 481 PY 482

[Close]

BLAST of CSPI03G07520 vs. NCBI nr
Match: XP_008437829.1 (PREDICTED: heterogeneous nuclear ribonucleoprotein R isoform X1 [Cucumis melo] >XP_008437830.1 PREDICTED: heterogeneous nuclear ribonucleoprotein R isoform X1 [Cucumis melo])

HSP 1 Score: 919.1 bits (2374), Expect = 1.6e-263
Identity = 474/483 (98.14%), Postives = 479/483 (99.17%), Query Frame = 0


Query: 1   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEEPQVGTDT 60
           MAD SEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEEPQVGTDT
Sbjct: 1   MADASEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEEPQVGTDT 60

Query: 61  EDKFS-DDRNNLSVESIENREKSSSLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVLEE 120
           EDKFS D RNNLSVESIENREKS+SLLDED+LEKHAQLLALPPHGSEVFIGGLSRDVLEE
Sbjct: 61  EDKFSGDGRNNLSVESIENREKSASLLDEDELEKHAQLLALPPHGSEVFIGGLSRDVLEE 120

Query: 121 DLRDMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVK-GKTIRC 180
           DLR+MCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVK GKTIRC
Sbjct: 121 DLREMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVKVGKTIRC 180

Query: 181 SLSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYYNN 240
           SLSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYYNN
Sbjct: 181 SLSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYYNN 240

Query: 241 ACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQVKALYVKNIPENTTTEQLKE 300
           ACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDN+AAAQVKALYVKNIPENTTTEQLKE
Sbjct: 241 ACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNTAAAQVKALYVKNIPENTTTEQLKE 300

Query: 301 LFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKP 360
           LFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKP
Sbjct: 301 LFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKP 360

Query: 361 QSDKKSDGAYSHISGSYPNHLLHGGYGGYGGNPYGSLGGYGVTAGFHQPMIYGRGPMPAG 420
           QSDKKSDGAYSHISGSYPNHLLHGGYGGYGGNPYGS+GGYGVTAGFHQPMIYGRGPMPAG
Sbjct: 361 QSDKKSDGAYSHISGSYPNHLLHGGYGGYGGNPYGSIGGYGVTAGFHQPMIYGRGPMPAG 420

Query: 421 MQMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGTMGRSGGSSSSDDVNRGRRY 480
           MQMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGTMGRSGGSSSSDDVNRGRRY
Sbjct: 421 MQMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGTMGRSGGSSSSDDVNRGRRY 480

Query: 481 RPY 482
           RPY
Sbjct: 481 RPY 483

[Close]

BLAST of CSPI03G07520 vs. NCBI nr
Match: TYK20804.1 (heterogeneous nuclear ribonucleoprotein R isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 913.7 bits (2360), Expect = 6.8e-262
Identity = 470/480 (97.92%), Postives = 476/480 (99.17%), Query Frame = 0


Query: 1   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEEPQVGTDT 60
           MAD SEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEEPQVGTDT
Sbjct: 1   MADASEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEEPQVGTDT 60

Query: 61  EDKFS-DDRNNLSVESIENREKSSSLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVLEE 120
           EDKFS D RNNLSVESIENREKS+SLLDED+LEKHAQLLALPPHGSEVFIGGLSRDVLEE
Sbjct: 61  EDKFSGDGRNNLSVESIENREKSASLLDEDELEKHAQLLALPPHGSEVFIGGLSRDVLEE 120

Query: 121 DLRDMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVKGKTIRCS 180
           DLR+MCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVKGKTIRCS
Sbjct: 121 DLREMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVKGKTIRCS 180

Query: 181 LSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYYNNA 240
           LSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYYNNA
Sbjct: 181 LSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYYNNA 240

Query: 241 CADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQVKALYVKNIPENTTTEQLKEL 300
           CADYSRQKMSSANFKLDGNSPTVSWADPKSMPDN+AAAQVKALYVKNIPENTTTEQLKEL
Sbjct: 241 CADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNTAAAQVKALYVKNIPENTTTEQLKEL 300

Query: 301 FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ 360
           FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ
Sbjct: 301 FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ 360

Query: 361 SDKKSDGAYSHISGSYPNHLLHGGYGGYGGNPYGSLGGYGVTAGFHQPMIYGRGPMPAGM 420
           SDKKSDGAYSHISGSYPNHLLHGGYGGYGGNPYGS+GGYGVTAGFHQPMIYGRGPMPAGM
Sbjct: 361 SDKKSDGAYSHISGSYPNHLLHGGYGGYGGNPYGSIGGYGVTAGFHQPMIYGRGPMPAGM 420

Query: 421 QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGTMGRSGGSSSSDDVNRGRRYR 480
           QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGTMGRSGGSSSSDDVNRGRR +
Sbjct: 421 QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGTMGRSGGSSSSDDVNRGRRVK 480

[Close]

BLAST of CSPI03G07520 vs. TAIR 10
Match: AT4G00830.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 581.3 bits (1497), Expect = 7.4e-166
Identity = 315/500 (63.00%), Postives = 392/500 (78.40%), Query Frame = 0


Query: 1   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDV-EEVSEEPQV--- 60
           M+D  + ++RVD EE +Y  EM+D+VEE   E+  +    +  ++DV  + +EE +V   
Sbjct: 1   MSDARDNDDRVDFEEGSY-SEMEDEVEEEQVEEYEEEEEEDDDDDDVGNQNAEEREVEDY 60

Query: 61  ----GTDTEDK----FSDDRNNLSVESIENREKSSSLLDEDDLEKHAQLLALPPHGSEVF 120
               G D ED       DD N++ +E+ ++ EK  S +D++D EK++ LL+LPPHGSEVF
Sbjct: 61  GDTKGGDMEDVQEEIAEDDDNHIDIETADDDEKPPSPIDDEDREKYSHLLSLPPHGSEVF 120

Query: 121 IGGLSRDVLEEDLRDMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHG 180
           IGGL RDV EEDLRD+CE +GEIFE+R++KD+DSG+SKGYAF+AFKTK+ AQKAIE+LH 
Sbjct: 121 IGGLPRDVGEEDLRDLCEEIGEIFEVRLMKDRDSGDSKGYAFVAFKTKDVAQKAIEELHS 180

Query: 181 KEVKGKTIRCSLSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNR 240
           KE KGKTIRCSLS++K+RLFIGN+PK+WT+DEFR++IE VGPGVENIELIKDP N  RNR
Sbjct: 181 KEFKGKTIRCSLSETKNRLFIGNIPKNWTEDEFRKVIEDVGPGVENIELIKDPTNTTRNR 240

Query: 241 GFAFVLYYNNACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNS-AAAQVKALYVKNI 300
           GFAFVLYYNNACADYSRQKM  +NFKL+GN+PTV+WADPKS P++S AAAQVKALYVKNI
Sbjct: 241 GFAFVLYYNNACADYSRQKMIDSNFKLEGNAPTVTWADPKSSPEHSAAAAQVKALYVKNI 300

Query: 301 PENTTTEQLKELFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIE 360
           PENT+TEQLKELFQ+HGEVTK+  PPGK G  KRDF F+HYAERSSALKAVK+TE+YE+ 
Sbjct: 301 PENTSTEQLKELFQRHGEVTKIVTPPGKGG--KRDFGFVHYAERSSALKAVKDTERYEVN 360

Query: 361 GQLLEVVLAKPQSDKKSD-GAYSHISGSYPNHLLHGGYGGYGGNPYGSLG-GYGVTAGFH 420
           GQ LEVVLAKPQ+++K D  +YS+ +   P   +H  +GG+   PYG++G G G+   F 
Sbjct: 361 GQPLEVVLAKPQAERKHDPSSYSYGAAPTPAPFVHPTFGGFAAAPYGAMGAGLGIAGSFS 420

Query: 421 QPMIYGRGPMPAGMQMVPMVLPDGRIGYVLQQPGVPM---PPSRSRRSERSNGSGGTMGR 480
           QPMIYGRG MP GMQMVPM+LPDGR+GYVLQQPG+PM   PP R RR++R+NGS G  GR
Sbjct: 421 QPMIYGRGAMPTGMQMVPMLLPDGRVGYVLQQPGMPMAAAPPQRPRRNDRNNGSSGGSGR 480

Query: 481 SGGSSSSDDVNR-GRRYRPY 482
              +S   D NR GRRYRPY
Sbjct: 481 D--NSHEHDGNRGGRRYRPY 495

[Close]

BLAST of CSPI03G07520 vs. TAIR 10
Match: AT4G00830.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 581.3 bits (1497), Expect = 7.4e-166
Identity = 315/500 (63.00%), Postives = 392/500 (78.40%), Query Frame = 0


Query: 1   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDV-EEVSEEPQV--- 60
           M+D  + ++RVD EE +Y  EM+D+VEE   E+  +    +  ++DV  + +EE +V   
Sbjct: 1   MSDARDNDDRVDFEEGSY-SEMEDEVEEEQVEEYEEEEEEDDDDDDVGNQNAEEREVEDY 60

Query: 61  ----GTDTEDK----FSDDRNNLSVESIENREKSSSLLDEDDLEKHAQLLALPPHGSEVF 120
               G D ED       DD N++ +E+ ++ EK  S +D++D EK++ LL+LPPHGSEVF
Sbjct: 61  GDTKGGDMEDVQEEIAEDDDNHIDIETADDDEKPPSPIDDEDREKYSHLLSLPPHGSEVF 120

Query: 121 IGGLSRDVLEEDLRDMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHG 180
           IGGL RDV EEDLRD+CE +GEIFE+R++KD+DSG+SKGYAF+AFKTK+ AQKAIE+LH 
Sbjct: 121 IGGLPRDVGEEDLRDLCEEIGEIFEVRLMKDRDSGDSKGYAFVAFKTKDVAQKAIEELHS 180

Query: 181 KEVKGKTIRCSLSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNR 240
           KE KGKTIRCSLS++K+RLFIGN+PK+WT+DEFR++IE VGPGVENIELIKDP N  RNR
Sbjct: 181 KEFKGKTIRCSLSETKNRLFIGNIPKNWTEDEFRKVIEDVGPGVENIELIKDPTNTTRNR 240

Query: 241 GFAFVLYYNNACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNS-AAAQVKALYVKNI 300
           GFAFVLYYNNACADYSRQKM  +NFKL+GN+PTV+WADPKS P++S AAAQVKALYVKNI
Sbjct: 241 GFAFVLYYNNACADYSRQKMIDSNFKLEGNAPTVTWADPKSSPEHSAAAAQVKALYVKNI 300

Query: 301 PENTTTEQLKELFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIE 360
           PENT+TEQLKELFQ+HGEVTK+  PPGK G  KRDF F+HYAERSSALKAVK+TE+YE+ 
Sbjct: 301 PENTSTEQLKELFQRHGEVTKIVTPPGKGG--KRDFGFVHYAERSSALKAVKDTERYEVN 360

Query: 361 GQLLEVVLAKPQSDKKSD-GAYSHISGSYPNHLLHGGYGGYGGNPYGSLG-GYGVTAGFH 420
           GQ LEVVLAKPQ+++K D  +YS+ +   P   +H  +GG+   PYG++G G G+   F 
Sbjct: 361 GQPLEVVLAKPQAERKHDPSSYSYGAAPTPAPFVHPTFGGFAAAPYGAMGAGLGIAGSFS 420

Query: 421 QPMIYGRGPMPAGMQMVPMVLPDGRIGYVLQQPGVPM---PPSRSRRSERSNGSGGTMGR 480
           QPMIYGRG MP GMQMVPM+LPDGR+GYVLQQPG+PM   PP R RR++R+NGS G  GR
Sbjct: 421 QPMIYGRGAMPTGMQMVPMLLPDGRVGYVLQQPGMPMAAAPPQRPRRNDRNNGSSGGSGR 480

Query: 481 SGGSSSSDDVNR-GRRYRPY 482
              +S   D NR GRRYRPY
Sbjct: 481 D--NSHEHDGNRGGRRYRPY 495

[Close]

BLAST of CSPI03G07520 vs. TAIR 10
Match: AT4G00830.4 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 560.8 bits (1444), Expect = 1.0e-159
Identity = 311/501 (62.08%), Postives = 386/501 (77.05%), Query Frame = 0


Query: 1   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDV-EEVSEEPQV--- 60
           M+D  + ++RVD EE +Y  EM+D+VEE   E+  +    +  ++DV  + +EE +V   
Sbjct: 1   MSDARDNDDRVDFEEGSY-SEMEDEVEEEQVEEYEEEEEEDDDDDDVGNQNAEEREVEDY 60

Query: 61  ----GTDTEDK----FSDDRNNLSVESIENREKSSSLLDEDDLEKHAQLLALPPHGSEVF 120
               G D ED       DD N++ +E+ ++ EK  S +D++D EK++ LL+LPPHGSEVF
Sbjct: 61  GDTKGGDMEDVQEEIAEDDDNHIDIETADDDEKPPSPIDDEDREKYSHLLSLPPHGSEVF 120

Query: 121 IGGLSRDVLEEDLRDMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHG 180
           IGGL RDV EEDLRD+CE +GEIFE+R++KD+DSG+SKGYAF+AFKTK+ AQKAIE+LH 
Sbjct: 121 IGGLPRDVGEEDLRDLCEEIGEIFEVRLMKDRDSGDSKGYAFVAFKTKDVAQKAIEELHS 180

Query: 181 KEVK-GKTIRCSLSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRN 240
           KE K   T  CSLS S +RLFIGN+PK+WT+DEFR++IE VGPGVENIELIKDP N  RN
Sbjct: 181 KEFKASSTANCSLSLS-NRLFIGNIPKNWTEDEFRKVIEDVGPGVENIELIKDPTNTTRN 240

Query: 241 RGFAFVLYYNNACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNS-AAAQVKALYVKN 300
           RGFAFVLYYNNACADYSRQKM  +NFKL+GN+PTV+WADPKS P++S AAAQVKALYVKN
Sbjct: 241 RGFAFVLYYNNACADYSRQKMIDSNFKLEGNAPTVTWADPKSSPEHSAAAAQVKALYVKN 300

Query: 301 IPENTTTEQLKELFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEI 360
           IPENT+TEQLKELFQ+HGEVTK+  PPGK G  KRDF F+HYAERSSALKAVK+TE+YE+
Sbjct: 301 IPENTSTEQLKELFQRHGEVTKIVTPPGKGG--KRDFGFVHYAERSSALKAVKDTERYEV 360

Query: 361 EGQLLEVVLAKPQSDKKSD-GAYSHISGSYPNHLLHGGYGGYGGNPYGSLG-GYGVTAGF 420
            GQ LEVVLAKPQ+++K D  +YS+ +   P   +H  +GG+   PYG++G G G+   F
Sbjct: 361 NGQPLEVVLAKPQAERKHDPSSYSYGAAPTPAPFVHPTFGGFAAAPYGAMGAGLGIAGSF 420

Query: 421 HQPMIYGRGPMPAGMQMVPMVLPDGRIGYVLQQPGVPM---PPSRSRRSERSNGSGGTMG 480
            QPMIYGRG MP GMQMVPM+LPDGR+GYVLQQPG+PM   PP R RR++R+NGS G  G
Sbjct: 421 SQPMIYGRGAMPTGMQMVPMLLPDGRVGYVLQQPGMPMAAAPPQRPRRNDRNNGSSGGSG 480

Query: 481 RSGGSSSSDDVNR-GRRYRPY 482
           R   +S   D NR GRRYRPY
Sbjct: 481 RD--NSHEHDGNRGGRRYRPY 495

[Close]

BLAST of CSPI03G07520 vs. TAIR 10
Match: AT4G00830.3 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 553.9 bits (1426), Expect = 1.3e-157
Identity = 304/493 (61.66%), Postives = 375/493 (76.06%), Query Frame = 0


Query: 1   MADGSEVEERVDLEEDNYMEEMDDDV-----EEHVDEDGVDRRAGELPEEDVEEVSEEPQ 60
           M D  E E+  + EE+   ++ DDDV     EE   ED  D + G++  EDV+E   E  
Sbjct: 1   MEDEVEEEQVEEYEEEEEEDDDDDDVGNQNAEEREVEDYGDTKGGDM--EDVQEEIAE-- 60

Query: 61  VGTDTEDKFSDDRNNLSVESIENREKSSSLLDEDDLEKHAQLLALPPHGSEVFIGGLSRD 120
                     DD N++ +E+ ++ EK  S +D++D EK++ LL+LPPHGSEVFIGGL RD
Sbjct: 61  ----------DDDNHIDIETADDDEKPPSPIDDEDREKYSHLLSLPPHGSEVFIGGLPRD 120

Query: 121 VLEEDLRDMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVKGKT 180
           V EEDLRD+CE +GEIFE+R++KD+DSG+SKGYAF+AFKTK+ AQKAIE+LH KE KGKT
Sbjct: 121 VGEEDLRDLCEEIGEIFEVRLMKDRDSGDSKGYAFVAFKTKDVAQKAIEELHSKEFKGKT 180

Query: 181 IRCSLSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLY 240
           IRCSLS++K+RLFIGN+PK+WT+DEFR++IE VGPG        DP N  RNRGFAFVLY
Sbjct: 181 IRCSLSETKNRLFIGNIPKNWTEDEFRKVIEDVGPG--------DPTNTTRNRGFAFVLY 240

Query: 241 YNNACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNS-AAAQVKALYVKNIPENTTTE 300
           YNNACADYSRQKM  +NFKL+GN+PTV+WADPKS P++S AAAQVKALYVKNIPENT+TE
Sbjct: 241 YNNACADYSRQKMIDSNFKLEGNAPTVTWADPKSSPEHSAAAAQVKALYVKNIPENTSTE 300

Query: 301 QLKELFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVV 360
           QLKELFQ+HGEVTK+  PPGK G  KRDF F+HYAERSSALKAVK+TE+YE+ GQ LEVV
Sbjct: 301 QLKELFQRHGEVTKIVTPPGKGG--KRDFGFVHYAERSSALKAVKDTERYEVNGQPLEVV 360

Query: 361 LAKPQSDKKSD-GAYSHISGSYPNHLLHGGYGGYGGNPYGSLG-GYGVTAGFHQPMIYGR 420
           LAKPQ+++K D  +YS+ +   P   +H  +GG+   PYG++G G G+   F QPMIYGR
Sbjct: 361 LAKPQAERKHDPSSYSYGAAPTPAPFVHPTFGGFAAAPYGAMGAGLGIAGSFSQPMIYGR 420

Query: 421 GPMPAGMQMVPMVLPDGRIGYVLQQPGVPM---PPSRSRRSERSNGSGGTMGRSGGSSSS 480
           G MP GMQMVPM+LPDGR+GYVLQQPG+PM   PP R RR++R+NGS G  GR   +S  
Sbjct: 421 GAMPTGMQMVPMLLPDGRVGYVLQQPGMPMAAAPPQRPRRNDRNNGSSGGSGRD--NSHE 467

Query: 481 DDVNR-GRRYRPY 482
            D NR GRRYRPY
Sbjct: 481 HDGNRGGRRYRPY 467

[Close]

BLAST of CSPI03G07520 vs. TAIR 10
Match: AT3G52660.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 404.4 bits (1038), Expect = 1.2e-112
Identity = 219/487 (44.97%), Postives = 324/487 (66.53%), Query Frame = 0


Query: 3   DGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEEPQVGTDTED 62
           D  E EERVDL+ DN  EE+   +EE V+ +       E+ EE++EE+ EE +       
Sbjct: 13  DSMESEERVDLDGDNDPEEI---LEEEVEYE-------EVEEEEIEEIEEEIE------- 72

Query: 63  KFSDDRNNLSVESIENREKSSSLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVLEEDLR 122
                   + VE  E  E + +  +E++ ++H +LLALPPHGSEV++GG+  D  E DL+
Sbjct: 73  ------EEVEVEEEEEEEDAVATEEEEEKKRHVELLALPPHGSEVYLGGIPTDATEGDLK 132

Query: 123 DMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVKGKTIRCSLSD 182
             C S+GE+ E+RI+++KDSG+ KGYAF+ F++K+ A +AI+ L+  + +GK I+CS + 
Sbjct: 133 GFCGSIGEVTEVRIMREKDSGDGKGYAFVTFRSKDLAAEAIDTLNNTDFRGKRIKCSTTQ 192

Query: 183 SKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYYNNACAD 242
           +KHRLF+GNVP++W + + ++    +GPGV+ +EL K+PQN  RNRGFAF+ YYN+ACA+
Sbjct: 193 AKHRLFLGNVPRNWMESDIKKAANRIGPGVQIVELPKEPQNMGRNRGFAFIEYYNHACAE 252

Query: 243 YSRQKMSSANFKLDGNSPTVSWADPKS-MPDNSAAAQVKALYVKNIPENTTTEQLKELFQ 302
           YS+QKMS+ +FKLD N+PTVSWA+ +S    +S+A+QVKALY+KN+P + T E+LK LF+
Sbjct: 253 YSKQKMSNPSFKLDDNAPTVSWAESRSGGGGDSSASQVKALYIKNLPRDITQERLKALFE 312

Query: 303 QHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQSD 362
            HG++ KV +PP K G     + F+HYAER+S ++A+K TE+YEI+G +L+  LAKPQ+D
Sbjct: 313 HHGKILKVVIPPAKPGKEDSRYGFVHYAERTSVMRALKNTERYEIDGHMLDCTLAKPQAD 372

Query: 363 KKSDG------AYSHISGSYPNHLLHGGYGGYGGNPYGSLGGYGVTAGFHQPMIYGRGPM 422
           +K++         S +  +YP  L +    G   +P+G+LGG+G +A + QP+++  G  
Sbjct: 373 QKTNTNTVQNVQKSQLQPNYPPLLSY----GMAPSPFGALGGFGASA-YSQPLMHAGGHA 432

Query: 423 PAGMQMVPMVLPDGRIGYVLQQPGV-PMPPSRSRRSERSNGSGGTMGRSGGSSSSDDVNR 482
             GM M+P++LPDGRIGYVLQQPG+  MP    R S    G  G+   SG   SSD+   
Sbjct: 433 AGGMSMMPIMLPDGRIGYVLQQPGLAAMPQPPPRHSPPYRGGSGSSSSSGSKRSSDNGRG 471

The following BLAST results are available for this feature:

BLAST of CSPI03G07520 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ASP6	1.0e-164	63.00	Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana OX=3702 GN=LIF...	[more]
O43390	1.2e-46	32.30	Heterogeneous nuclear ribonucleoprotein R OS=Homo sapiens OX=9606 GN=HNRNPR PE=1...	[more]
Q7TP47	3.7e-45	34.63	Heterogeneous nuclear ribonucleoprotein Q OS=Rattus norvegicus OX=10116 GN=Syncr...	[more]
O60506	1.3e-42	32.07	Heterogeneous nuclear ribonucleoprotein Q OS=Homo sapiens OX=9606 GN=SYNCRIP PE=...	[more]
Q7TMK9	1.7e-42	32.07	Heterogeneous nuclear ribonucleoprotein Q OS=Mus musculus OX=10090 GN=Syncrip PE...	[more]

BLAST of CSPI03G07520 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3AUX7	3.2e-265	98.34	heterogeneous nuclear ribonucleoprotein R isoform X2 OS=Cucumis melo OX=3656 GN=...	[more]
A0A1S3AUK8	7.8e-264	98.14	heterogeneous nuclear ribonucleoprotein R isoform X1 OS=Cucumis melo OX=3656 GN=...	[more]
A0A5D3DB75	3.3e-262	97.92	Heterogeneous nuclear ribonucleoprotein R isoform X2 OS=Cucumis melo var. makuwa...	[more]
A0A5A7TZ47	8.1e-261	97.71	Heterogeneous nuclear ribonucleoprotein R isoform X1 OS=Cucumis melo var. makuwa...	[more]
A0A6J1E8S5	1.4e-249	92.12	heterogeneous nuclear ribonucleoprotein Q-like OS=Cucurbita moschata OX=3662 GN=...	[more]

BLAST of CSPI03G07520 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004133787.1	1.2e-269	100.00	heterogeneous nuclear ribonucleoprotein Q isoform X2 [Cucumis sativus] >KAE86502...	[more]
XP_011650655.1	2.8e-268	99.79	heterogeneous nuclear ribonucleoprotein Q isoform X1 [Cucumis sativus] >XP_01165...	[more]
XP_008437831.1	6.5e-265	98.34	PREDICTED: heterogeneous nuclear ribonucleoprotein R isoform X2 [Cucumis melo]	[more]
XP_008437829.1	1.6e-263	98.14	PREDICTED: heterogeneous nuclear ribonucleoprotein R isoform X1 [Cucumis melo] >...	[more]
TYK20804.1	6.8e-262	97.92	heterogeneous nuclear ribonucleoprotein R isoform X2 [Cucumis melo var. makuwa]	[more]

BLAST of CSPI03G07520 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G00830.1	7.4e-166	63.00	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G00830.2	7.4e-166	63.00	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G00830.4	1.0e-159	62.08	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G00830.3	1.3e-157	61.66	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT3G52660.1	1.2e-112	44.97	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003954	RNA recognition motif domain, eukaryote	SMART	SM00361	rrm2_1	coord: 106..179 e-value: 2.1E-8 score: 43.9
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 281..354 e-value: 1.1E-17 score: 74.8 coord: 106..179 e-value: 1.2E-26 score: 104.5 coord: 186..263 e-value: 2.3E-11 score: 53.8
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 282..351 e-value: 7.5E-16 score: 57.7 coord: 187..253 e-value: 2.4E-9 score: 36.9 coord: 107..177 e-value: 7.4E-21 score: 73.8
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 105..183 score: 20.0306
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 185..267 score: 12.372725
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 280..358 score: 15.869082
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 268..399 e-value: 6.8E-22 score: 80.0
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 186..266 e-value: 1.5E-19 score: 71.9
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 6..185 e-value: 2.6E-29 score: 104.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 56..85
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 8..30
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..85
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 447..471
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 435..481
None	No IPR available	PANTHER	PTHR48024:SF13	HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN Q	coord: 2..479
None	No IPR available	PANTHER	PTHR48024	GEO13361P1-RELATED	coord: 2..479
None	No IPR available	CDD	cd00590	RRM_SF	coord: 107..179 e-value: 1.93107E-23 score: 91.5977
None	No IPR available	CDD	cd12251	RRM3_hnRNPR_like	coord: 279..358 e-value: 6.90953E-32 score: 114.644
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 102..185
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 185..361

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G07520.1	CSPI03G07520.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding