CSPI03G06210 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI03G06210
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionBeta-glucuronosyltransferase GlcAT14A-like
LocationChr3: 5321018 .. 5321437 (-)
RNA-Seq ExpressionCSPI03G06210
SyntenyCSPI03G06210
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGATGAACGACGACGAAAATCCAGCCGAACCCTCGATCGGAGAAAAAACGATTTCGACTGCAACAATCGGAGACAAATTACTAGTCTCGATAAGCGATCGGAGAGAAAATCCAGGTGAAGCCACGTTTTCTTTGTTTATCGTAGAGAGAATCGACGACCCACCACTTCGACTTCAACTGATGCGATTTGAGCCGATCTATACCCTGATTGCTACTTCTGACCCGAAGTACCGGTTTCTTATGATTTTGACTGCAAGGAGGACGATTGCAACTTCCGAAATTTCCACGGGACTCTTCATTTCGTTTCAACAAGGTAGGTTTTCAATTACGATTGGTTTACTTCATACTTGTTATGCAGTTATTCATGTGACCTTTTCTGCAGAGCATGACGACCTTTGTGATCGTATTGCAATCTAA

mRNA sequence

ATGGAGATGAACGACGACGAAAATCCAGCCGAACCCTCGATCGGAGAAAAAACGATTTCGACTGCAACAATCGGAGACAAATTACTAGTCTCGATAAGCGATCGGAGAGAAAATCCAGGTGAAGCCACGTTTTCTTTGTTTATCGTAGAGAGAATCGACGACCCACCACTTCGACTTCAACTGATGCGATTTGAGCCGATCTATACCCTGATTGCTACTTCTGACCCGAAGTACCGGTTTCTTATGATTTTGACTGCAAGGAGGACGATTGCAACTTCCGAAATTTCCACGGGACTCTTCATTTCGTTTCAACAAGGTAGGTTTTCAATTACGATTGGTTTACTTCATACTTGTTATGCAGTTATTCATGTGACCTTTTCTGCAGAGCATGACGACCTTTGTGATCGTATTGCAATCTAA

Coding sequence (CDS)

ATGGAGATGAACGACGACGAAAATCCAGCCGAACCCTCGATCGGAGAAAAAACGATTTCGACTGCAACAATCGGAGACAAATTACTAGTCTCGATAAGCGATCGGAGAGAAAATCCAGGTGAAGCCACGTTTTCTTTGTTTATCGTAGAGAGAATCGACGACCCACCACTTCGACTTCAACTGATGCGATTTGAGCCGATCTATACCCTGATTGCTACTTCTGACCCGAAGTACCGGTTTCTTATGATTTTGACTGCAAGGAGGACGATTGCAACTTCCGAAATTTCCACGGGACTCTTCATTTCGTTTCAACAAGGTAGGTTTTCAATTACGATTGGTTTACTTCATACTTGTTATGCAGTTATTCATGTGACCTTTTCTGCAGAGCATGACGACCTTTGTGATCGTATTGCAATCTAA

Protein sequence

MEMNDDENPAEPSIGEKTISTATIGDKLLVSISDRRENPGEATFSLFIVERIDDPPLRLQLMRFEPIYTLIATSDPKYRFLMILTARRTIATSEISTGLFISFQQGRFSITIGLLHTCYAVIHVTFSAEHDDLCDRIAI*
Homology
[Close]
BLAST of CSPI03G06210 vs. ExPASy TrEMBL
Match: A0A0A0L7Z5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G105980 PE=4 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 3.7e-49
Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0 

Query: 1   MEMNDDENPAEPSIGEKTISTATIGDKLLVSISDRRENPGEATFSLFIVERIDDPPLRLQ 60
           MEMNDDENPAEPSIGEKTISTATIGDKLLVSISDRRENPGEATFSLFIVERIDDPPLRLQ
Sbjct: 1   MEMNDDENPAEPSIGEKTISTATIGDKLLVSISDRRENPGEATFSLFIVERIDDPPLRLQ 60

Query: 61  LMRFEPIYTLIATSDPKYRFLMILTARRTIATSEISTGLFISFQQ 106
           LMRFEPIYTLIATSDPKYRFLMILTARRTIATSEISTGLFISFQQ
Sbjct: 61  LMRFEPIYTLIATSDPKYRFLMILTARRTIATSEISTGLFISFQQ 105

[Close]
BLAST of CSPI03G06210 vs. ExPASy TrEMBL
Match: A0A5A7UXN9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G005150 PE=4 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 5.8e-26
Identity = 65/78 (83.33%), Postives = 68/78 (87.18%), Query Frame = 0 

Query: 62  MRFEPIYTLIATSDPKYRFLMILTARRTIATSEISTGLFISFQQGRFSITIGLLHTCYAV 121
           MRFEPIYT IATSDPKYR LMI T RRT+ATSEIS  LFISFQQGR SI+I LLHTC+AV
Sbjct: 1   MRFEPIYTPIATSDPKYRCLMIWTPRRTVATSEISRRLFISFQQGRSSISIALLHTCHAV 60

Query: 122 IHVTFSAEHDDLCDRIAI 140
           IHV FSAEHD LCDRIAI
Sbjct: 61  IHVNFSAEHDYLCDRIAI 78

[Close]
BLAST of CSPI03G06210 vs. ExPASy TrEMBL
Match: A0A5D3BVW6 (Beta-glucuronosyltransferase GlcAT14A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold18G00360 PE=4 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 4.9e-09
Identity = 37/44 (84.09%), Postives = 38/44 (86.36%), Query Frame = 0 

Query: 62  MRFEPIYTLIATSDPKYRFLMILTARRTIATSEISTGLFISFQQ 106
           MRFEPIYT IATSDPKYR LMI T RRT+ATSEIS  LFISFQQ
Sbjct: 1   MRFEPIYTPIATSDPKYRCLMIWTPRRTVATSEISRRLFISFQQ 44

[Close]
BLAST of CSPI03G06210 vs. NCBI nr
Match: KAE8650181.1 (hypothetical protein Csa_010341, partial [Cucumis sativus])

HSP 1 Score: 204.1 bits (518), Expect = 7.7e-49
Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0 

Query: 1   MEMNDDENPAEPSIGEKTISTATIGDKLLVSISDRRENPGEATFSLFIVERIDDPPLRLQ 60
           MEMNDDENPAEPSIGEKTISTATIGDKLLVSISDRRENPGEATFSLFIVERIDDPPLRLQ
Sbjct: 1   MEMNDDENPAEPSIGEKTISTATIGDKLLVSISDRRENPGEATFSLFIVERIDDPPLRLQ 60

Query: 61  LMRFEPIYTLIATSDPKYRFLMILTARRTIATSEISTGLFISFQQ 106
           LMRFEPIYTLIATSDPKYRFLMILTARRTIATSEISTGLFISFQQ
Sbjct: 61  LMRFEPIYTLIATSDPKYRFLMILTARRTIATSEISTGLFISFQQ 105

[Close]
BLAST of CSPI03G06210 vs. NCBI nr
Match: KAA0060632.1 (hypothetical protein E6C27_scaffold22G005150 [Cucumis melo var. makuwa])

HSP 1 Score: 127.1 bits (318), Expect = 1.2e-25
Identity = 65/78 (83.33%), Postives = 68/78 (87.18%), Query Frame = 0 

Query: 62  MRFEPIYTLIATSDPKYRFLMILTARRTIATSEISTGLFISFQQGRFSITIGLLHTCYAV 121
           MRFEPIYT IATSDPKYR LMI T RRT+ATSEIS  LFISFQQGR SI+I LLHTC+AV
Sbjct: 1   MRFEPIYTPIATSDPKYRCLMIWTPRRTVATSEISRRLFISFQQGRSSISIALLHTCHAV 60

Query: 122 IHVTFSAEHDDLCDRIAI 140
           IHV FSAEHD LCDRIAI
Sbjct: 61  IHVNFSAEHDYLCDRIAI 78

[Close]
BLAST of CSPI03G06210 vs. NCBI nr
Match: TYK02239.1 (beta-glucuronosyltransferase GlcAT14A-like [Cucumis melo var. makuwa])

HSP 1 Score: 70.9 bits (172), Expect = 1.0e-08
Identity = 37/44 (84.09%), Postives = 38/44 (86.36%), Query Frame = 0 

Query: 62  MRFEPIYTLIATSDPKYRFLMILTARRTIATSEISTGLFISFQQ 106
           MRFEPIYT IATSDPKYR LMI T RRT+ATSEIS  LFISFQQ
Sbjct: 1   MRFEPIYTPIATSDPKYRCLMIWTPRRTVATSEISRRLFISFQQ 44

The following BLAST results are available for this feature:
BLAST of CSPI03G06210 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI03G06210 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L7Z53.7e-49100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G105980 PE=4 SV=1[more]
A0A5A7UXN95.8e-2683.33Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3BVW64.9e-0984.09Beta-glucuronosyltransferase GlcAT14A-like OS=Cucumis melo var. makuwa OX=119469... [more]
BLAST of CSPI03G06210 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8650181.17.7e-49100.00hypothetical protein Csa_010341, partial [Cucumis sativus][more]
KAA0060632.11.2e-2583.33hypothetical protein E6C27_scaffold22G005150 [Cucumis melo var. makuwa][more]
TYK02239.11.0e-0884.09beta-glucuronosyltransferase GlcAT14A-like [Cucumis melo var. makuwa][more]
BLAST of CSPI03G06210 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI03G06210.1CSPI03G06210.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane
molecular_function GO:0015020 glucuronosyltransferase activity