CSPI03G05820 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI03G05820
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Wound-responsive family protein
Location	Chr3: 4950974 .. 4951870 (+)
RNA-Seq Expression	CSPI03G05820
Synteny	CSPI03G05820

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTAACGTTAATAAATAAACAACTAAAAGAAGAAAACAGCGTAAACGCCTTTTTCACAAAATCCAGGAATCCTTCTCCACCAAAGCACCTTGTTTTCTCCTCAAAACCATGGCTTCCAAAATCTTCCTCCTTTCCCTTTAATTTTCCCCTTTCTTTTCCCCTCTCTCTATAAATACTCACATCTCACCAAAATTCCACAAACCCATTACAAATCTCTTCAATTCCTTCTTCTTTCTTCTTCTTCTTCTTCCATCAATTCAATTCACCAAACCTAGAAACACACAGAGAGAGAGAGAGAGAAAAAAAAAACAAAAAACAGAGCAGCATGTCTAGGAGCGCAGTTTGCAGAGCGTGGTTCGTGGCGGCGAGCATCGGGGCAGTCGAGGCGTTGAAGGATCAAGGGGTTTGCCGGTGGAATAATGTGATTAAATCACTTCAACAACATGGGAAGACCAAAGTTAGGTCTTACTATCAAGCTAAGAAGCTCTCTGCTTCTTCTTCTTCCGCCATTGCTAACCAGATCAAGAAGTCTAGAGAGGATAAGATGAGGAAAGTTATGGATTTGAGCTGTTTGGGACCTAGTACTATTAGATTCTAGGACATGTTTTTGTTTATGGGTTTATATGAAGAGTGTTTTGGGTCTTGGTCATGTGGGGTAGAAGAAGATATAATGTTCTTACCAAAAGAAAAAAAAAAGTACTTCTAGAGAAATGATATATATATAGGTTGTTTCTTCTCTTGTTTTTGTTTATGTTTGTGATGGTTTTGGGTTTGAAGTTTGGTAATGAAGCTTCAATTCCCTTCACTTTTTTTTTGTAAATAGGTCTCTGGACTCTGGATTACATATTAATGGACATTCAAATTCAAATCTTCCTCTCTTCCAAAATGGAGATGGAGA

mRNA sequence

GTAACGTTAATAAATAAACAACTAAAAGAAGAAAACAGCGTAAACGCCTTTTTCACAAAATCCAGGAATCCTTCTCCACCAAAGCACCTTGTTTTCTCCTCAAAACCATGGCTTCCAAAATCTTCCTCCTTTCCCTTTAATTTTCCCCTTTCTTTTCCCCTCTCTCTATAAATACTCACATCTCACCAAAATTCCACAAACCCATTACAAATCTCTTCAATTCCTTCTTCTTTCTTCTTCTTCTTCTTCCATCAATTCAATTCACCAAACCTAGAAACACACAGAGAGAGAGAGAGAGAAAAAAAAAACAAAAAACAGAGCAGCATGTCTAGGAGCGCAGTTTGCAGAGCGTGGTTCGTGGCGGCGAGCATCGGGGCAGTCGAGGCGTTGAAGGATCAAGGGGTTTGCCGGTGGAATAATGTGATTAAATCACTTCAACAACATGGGAAGACCAAAGTTAGGTCTTACTATCAAGCTAAGAAGCTCTCTGCTTCTTCTTCTTCCGCCATTGCTAACCAGATCAAGAAGTCTAGAGAGGATAAGATGAGGAAAGTTATGGATTTGAGCTGTTTGGGACCTAGTACTATTAGATTCTAGGACATGTTTTTGTTTATGGGTTTATATGAAGAGTGTTTTGGGTCTTGGTCATGTGGGGTAGAAGAAGATATAATGTTCTTACCAAAAGAAAAAAAAAAGTACTTCTAGAGAAATGATATATATATAGGTTGTTTCTTCTCTTGTTTTTGTTTATGTTTGTGATGGTTTTGGGTTTGAAGTTTGGTAATGAAGCTTCAATTCCCTTCACTTTTTTTTTGTAAATAGGTCTCTGGACTCTGGATTACATATTAATGGACATTCAAATTCAAATCTTCCTCTCTTCCAAAATGGAGATGGAGA

Coding sequence (CDS)

ATGTCTAGGAGCGCAGTTTGCAGAGCGTGGTTCGTGGCGGCGAGCATCGGGGCAGTCGAGGCGTTGAAGGATCAAGGGGTTTGCCGGTGGAATAATGTGATTAAATCACTTCAACAACATGGGAAGACCAAAGTTAGGTCTTACTATCAAGCTAAGAAGCTCTCTGCTTCTTCTTCTTCCGCCATTGCTAACCAGATCAAGAAGTCTAGAGAGGATAAGATGAGGAAAGTTATGGATTTGAGCTGTTTGGGACCTAGTACTATTAGATTCTAG

Protein sequence

MSRSAVCRAWFVAASIGAVEALKDQGVCRWNNVIKSLQQHGKTKVRSYYQAKKLSASSSSAIANQIKKSREDKMRKVMDLSCLGPSTIRF*

Homology

[Close]

BLAST of CSPI03G05820 vs. ExPASy TrEMBL
Match: A0A0A0L594 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G099650 PE=4 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 2.4e-41
Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0


Query: 1  MSRSAVCRAWFVAASIGAVEALKDQGVCRWNNVIKSLQQHGKTKVRSYYQAKKLSASSSS 60
          MSRSAVCRAWFVAASIGAVEALKDQGVCRWNNVIKSLQQHGKTKVRSYYQAKKLSASSSS
Sbjct: 1  MSRSAVCRAWFVAASIGAVEALKDQGVCRWNNVIKSLQQHGKTKVRSYYQAKKLSASSSS 60

Query: 61 AIANQIKKSREDKMRKVMDLSCLGPSTIRF 91
          AIANQIKKSREDKMRKVMDLSCLGPSTIRF
Sbjct: 61 AIANQIKKSREDKMRKVMDLSCLGPSTIRF 90

[Close]

BLAST of CSPI03G05820 vs. ExPASy TrEMBL
Match: A0A5A7TZR6 (Putative wound-induced protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold298G00840 PE=4 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 7.8e-40
Identity = 88/90 (97.78%), Postives = 88/90 (97.78%), Query Frame = 0


Query: 1  MSRSAVCRAWFVAASIGAVEALKDQGVCRWNNVIKSLQQHGKTKVRSYYQAKKLSASSSS 60
          MSRSAVCRAWFVAASIGAVEALKDQGVCRWNNVIKSLQQHGKTKVRSYYQAKKLSASSSS
Sbjct: 1  MSRSAVCRAWFVAASIGAVEALKDQGVCRWNNVIKSLQQHGKTKVRSYYQAKKLSASSSS 60

Query: 61 AIANQIKKSREDKMRKVMDLSCLGPSTIRF 91
          AIA QI KSREDKMRKVMDLSCLGPSTIRF
Sbjct: 61 AIAYQINKSREDKMRKVMDLSCLGPSTIRF 90

[Close]

BLAST of CSPI03G05820 vs. ExPASy TrEMBL
Match: A0A6J1JZW3 (uncharacterized protein LOC111489778 OS=Cucurbita maxima OX=3661 GN=LOC111489778 PE=4 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 1.2e-37
Identity = 81/90 (90.00%), Postives = 87/90 (96.67%), Query Frame = 0


Query: 1  MSRSAVCRAWFVAASIGAVEALKDQGVCRWNNVIKSLQQHGKTKVRSYYQAKKLSASSSS 60
          MS+SA CRAWFVAASIGAVEALKDQGVCRWNNVIKSLQQHGKTK+RSYY AKK+SASSSS
Sbjct: 1  MSKSAACRAWFVAASIGAVEALKDQGVCRWNNVIKSLQQHGKTKLRSYYPAKKISASSSS 60

Query: 61 AIANQIKKSREDKMRKVMDLSCLGPSTIRF 91
          AI NQ+K+SRE+KMRKVMDLSCLGPSTIRF
Sbjct: 61 AIGNQMKRSREEKMRKVMDLSCLGPSTIRF 90

[Close]

BLAST of CSPI03G05820 vs. ExPASy TrEMBL
Match: A0A6J1FVH7 (uncharacterized protein LOC111447671 OS=Cucurbita moschata OX=3662 GN=LOC111447671 PE=4 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 4.7e-37
Identity = 80/90 (88.89%), Postives = 86/90 (95.56%), Query Frame = 0


Query: 1  MSRSAVCRAWFVAASIGAVEALKDQGVCRWNNVIKSLQQHGKTKVRSYYQAKKLSASSSS 60
          MS+SA CRAWFVAASIGAVEA KDQGVCRWNNVIKSLQQHGKTK+RSYYQAKK+SASSSS
Sbjct: 1  MSKSAACRAWFVAASIGAVEASKDQGVCRWNNVIKSLQQHGKTKLRSYYQAKKISASSSS 60

Query: 61 AIANQIKKSREDKMRKVMDLSCLGPSTIRF 91
          AI NQ+K+ RE+KMRKVMDLSCLGPSTIRF
Sbjct: 61 AIGNQMKRCREEKMRKVMDLSCLGPSTIRF 90

[Close]

BLAST of CSPI03G05820 vs. ExPASy TrEMBL
Match: A0A6J1EMN4 (uncharacterized protein LOC111435977 OS=Cucurbita moschata OX=3662 GN=LOC111435977 PE=4 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 8.1e-37
Identity = 80/90 (88.89%), Postives = 85/90 (94.44%), Query Frame = 0


Query: 1  MSRSAVCRAWFVAASIGAVEALKDQGVCRWNNVIKSLQQHGKTKVRSYYQAKKLSASSSS 60
          MSRSA CRAWFVAASIGAVEA+KDQGVCRWNN+IKSL QHG +K+RSYYQAKKLSASSSS
Sbjct: 1  MSRSAACRAWFVAASIGAVEAMKDQGVCRWNNLIKSLHQHGNSKLRSYYQAKKLSASSSS 60

Query: 61 AIANQIKKSREDKMRKVMDLSCLGPSTIRF 91
          AIANQI KSRE+KMRKVMDL CLGPSTIRF
Sbjct: 61 AIANQINKSREEKMRKVMDLGCLGPSTIRF 90

[Close]

BLAST of CSPI03G05820 vs. NCBI nr
Match: KAA0046885.1 (putative wound-induced protein [Cucumis melo var. makuwa] >TYK03263.1 putative wound-induced protein [Cucumis melo var. makuwa])

HSP 1 Score: 172.6 bits (436), Expect = 1.6e-39
Identity = 88/90 (97.78%), Postives = 88/90 (97.78%), Query Frame = 0


Query: 1  MSRSAVCRAWFVAASIGAVEALKDQGVCRWNNVIKSLQQHGKTKVRSYYQAKKLSASSSS 60
          MSRSAVCRAWFVAASIGAVEALKDQGVCRWNNVIKSLQQHGKTKVRSYYQAKKLSASSSS
Sbjct: 1  MSRSAVCRAWFVAASIGAVEALKDQGVCRWNNVIKSLQQHGKTKVRSYYQAKKLSASSSS 60

Query: 61 AIANQIKKSREDKMRKVMDLSCLGPSTIRF 91
          AIA QI KSREDKMRKVMDLSCLGPSTIRF
Sbjct: 61 AIAYQINKSREDKMRKVMDLSCLGPSTIRF 90

[Close]

BLAST of CSPI03G05820 vs. NCBI nr
Match: XP_038877273.1 (uncharacterized protein LOC120069557 [Benincasa hispida])

HSP 1 Score: 169.5 bits (428), Expect = 1.4e-38
Identity = 85/90 (94.44%), Postives = 87/90 (96.67%), Query Frame = 0


Query: 1   MSRSAVCRAWFVAASIGAVEALKDQGVCRWNNVIKSLQQHGKTKVRSYYQAKKLSASSSS 60
           MS+SA CRAWFVAASIGAVEALKDQGVCRWNNVIKSLQQHGKTK RSYYQAKKLSASSSS
Sbjct: 74  MSKSAACRAWFVAASIGAVEALKDQGVCRWNNVIKSLQQHGKTKFRSYYQAKKLSASSSS 133

Query: 61  AIANQIKKSREDKMRKVMDLSCLGPSTIRF 91
           AIANQI KSRE+KMRKVMDLSCLGPSTIRF
Sbjct: 134 AIANQINKSREEKMRKVMDLSCLGPSTIRF 163

[Close]

BLAST of CSPI03G05820 vs. NCBI nr
Match: KAE8650166.1 (hypothetical protein Csa_011372 [Cucumis sativus])

HSP 1 Score: 169.5 bits (428), Expect = 1.4e-38
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0


Query: 1  MSRSAVCRAWFVAASIGAVEALKDQGVCRWNNVIKSLQQHGKTKVRSYYQAKKLSASSSS 60
          MSRSAVCRAWFVAASIGAVEALKDQGVCRWNNVIKSLQQHGKTKVRSYYQAKKLSASSSS
Sbjct: 1  MSRSAVCRAWFVAASIGAVEALKDQGVCRWNNVIKSLQQHGKTKVRSYYQAKKLSASSSS 60

Query: 61 AIANQIKKSREDKMRKVMDLSCLGPS 87
          AIANQIKKSREDKMRKVMDLSCLGPS
Sbjct: 61 AIANQIKKSREDKMRKVMDLSCLGPS 86

[Close]

BLAST of CSPI03G05820 vs. NCBI nr
Match: XP_023538267.1 (uncharacterized protein LOC111799095 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 165.2 bits (417), Expect = 2.6e-37
Identity = 81/90 (90.00%), Postives = 87/90 (96.67%), Query Frame = 0


Query: 1  MSRSAVCRAWFVAASIGAVEALKDQGVCRWNNVIKSLQQHGKTKVRSYYQAKKLSASSSS 60
          MS+SA CRAWFVAASIGAVEALKDQGVCRWNNVIKSLQQHGKTK RSYYQAKK+SASSSS
Sbjct: 1  MSKSAACRAWFVAASIGAVEALKDQGVCRWNNVIKSLQQHGKTKFRSYYQAKKISASSSS 60

Query: 61 AIANQIKKSREDKMRKVMDLSCLGPSTIRF 91
          AI NQ+K+SRE+K+RKVMDLSCLGPSTIRF
Sbjct: 61 AIGNQMKRSREEKVRKVMDLSCLGPSTIRF 90

[Close]

BLAST of CSPI03G05820 vs. NCBI nr
Match: XP_022993930.1 (uncharacterized protein LOC111489778 [Cucurbita maxima])

HSP 1 Score: 165.2 bits (417), Expect = 2.6e-37
Identity = 81/90 (90.00%), Postives = 87/90 (96.67%), Query Frame = 0


Query: 1  MSRSAVCRAWFVAASIGAVEALKDQGVCRWNNVIKSLQQHGKTKVRSYYQAKKLSASSSS 60
          MS+SA CRAWFVAASIGAVEALKDQGVCRWNNVIKSLQQHGKTK+RSYY AKK+SASSSS
Sbjct: 1  MSKSAACRAWFVAASIGAVEALKDQGVCRWNNVIKSLQQHGKTKLRSYYPAKKISASSSS 60

Query: 61 AIANQIKKSREDKMRKVMDLSCLGPSTIRF 91
          AI NQ+K+SRE+KMRKVMDLSCLGPSTIRF
Sbjct: 61 AIGNQMKRSREEKMRKVMDLSCLGPSTIRF 90

[Close]

BLAST of CSPI03G05820 vs. TAIR 10
Match: AT4G10265.1 (Wound-responsive family protein )

HSP 1 Score: 81.3 bits (199), Expect = 4.5e-16
Identity = 49/84 (58.33%), Postives = 60/84 (71.43%), Query Frame = 0


Query: 4  SAVCRAWFVAASIGAVEALKDQ-GVCRWNNVIKSLQQHGKTKVRSYYQAKKLSASSSSAI 63
          S+  + W VAASIGAVEALKDQ GVCRWN VI+S  Q+ +  +RS  QAKKLS SSS   
Sbjct: 2  SSASKTWMVAASIGAVEALKDQLGVCRWNYVIRSANQYLRNNLRSVSQAKKLS-SSSIDY 61

Query: 64 ANQIKKSREDKMRKVMDLSCLGPS 87
           N+ K++ E+ +R VM LSC GPS
Sbjct: 62 TNKTKQA-EESLRTVMYLSCWGPS 83

[Close]

BLAST of CSPI03G05820 vs. TAIR 10
Match: AT4G10270.1 (Wound-responsive family protein )

HSP 1 Score: 78.6 bits (192), Expect = 2.9e-15
Identity = 44/89 (49.44%), Postives = 59/89 (66.29%), Query Frame = 0


Query: 4  SAVCRAWFVAASIGAVEALKDQ-GVCRWNNVIKSLQQHGKTKVRSYYQAKKLSASSSSAI 63
          S+  +AW VA SIGAVEALKDQ G+CRWN +++S+ QH +  VRS  Q K+ S+SS SA 
Sbjct: 2  SSTSKAWTVAVSIGAVEALKDQLGLCRWNYILRSVNQHLRNNVRSVSQGKRFSSSSVSAA 61

Query: 64 A-----NQIKKSREDKMRKVMDLSCLGPS 87
                ++  K  E+ +R VM LSC GP+
Sbjct: 62 VTSSGESEKAKKAEESLRTVMYLSCWGPN 90

[Close]

BLAST of CSPI03G05820 vs. TAIR 10
Match: AT4G33560.1 (Wound-responsive family protein )

HSP 1 Score: 64.3 bits (155), Expect = 5.7e-11
Identity = 35/88 (39.77%), Postives = 48/88 (54.55%), Query Frame = 0


Query: 9  AWFVAASIGAVEALKDQGVCRWNNVIKSLQQHGKTKVRSYYQAKKLSASSSSAIANQIKK 68
          +W VA +I AVE LKDQGV RWN + + L +    +VR+     + S  +SS+ A  I+ 
Sbjct: 8  SWAVATAIAAVEVLKDQGVARWNYLFRLLHKEAMARVRTITVPSRPSPPTSSSSATSIRS 67

Query: 69 SR------EDKMRKVMDLSCLGPSTIRF 91
                  E    K M LSC GP+T+RF
Sbjct: 68 KPLSTTPFETSFEKAMGLSCFGPTTVRF 95

[Close]

BLAST of CSPI03G05820 vs. TAIR 10
Match: AT2G14070.1 (wound-responsive protein-related )

HSP 1 Score: 44.7 bits (104), Expect = 4.7e-05
Identity = 33/100 (33.00%), Postives = 54/100 (54.00%), Query Frame = 0


Query: 1   MSRSAVCR--AWFVAASIGAVEALKDQGVCRWNNVIKSLQQHGKTKVRSYYQAKK---LS 60
           MS +A  R  +W VA +I AVE        RWN  ++   +  + ++R+     +    +
Sbjct: 104 MSAAASTRHTSWMVATAIAAVET-------RWNYPLRFFNKDVRARLRAIAVTSRPPSSA 163

Query: 61  ASSSSAIANQIKKSR-----EDKMRKVMDLSCLGPSTIRF 91
           +SSSS+ A+ +K++      E  M +VM LSC GP+T+RF
Sbjct: 164 SSSSSSSADLVKENHPMPKSEASMERVMCLSCFGPTTVRF 196

The following BLAST results are available for this feature:

BLAST of CSPI03G05820 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI03G05820 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L594	2.4e-41	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G099650 PE=4 SV=1	[more]
A0A5A7TZR6	7.8e-40	97.78	Putative wound-induced protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A6J1JZW3	1.2e-37	90.00	uncharacterized protein LOC111489778 OS=Cucurbita maxima OX=3661 GN=LOC111489778...	[more]
A0A6J1FVH7	4.7e-37	88.89	uncharacterized protein LOC111447671 OS=Cucurbita moschata OX=3662 GN=LOC1114476...	[more]
A0A6J1EMN4	8.1e-37	88.89	uncharacterized protein LOC111435977 OS=Cucurbita moschata OX=3662 GN=LOC1114359...	[more]

BLAST of CSPI03G05820 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0046885.1	1.6e-39	97.78	putative wound-induced protein [Cucumis melo var. makuwa] >TYK03263.1 putative w...	[more]
XP_038877273.1	1.4e-38	94.44	uncharacterized protein LOC120069557 [Benincasa hispida]	[more]
KAE8650166.1	1.4e-38	100.00	hypothetical protein Csa_011372 [Cucumis sativus]	[more]
XP_023538267.1	2.6e-37	90.00	uncharacterized protein LOC111799095 [Cucurbita pepo subsp. pepo]	[more]
XP_022993930.1	2.6e-37	90.00	uncharacterized protein LOC111489778 [Cucurbita maxima]	[more]

BLAST of CSPI03G05820 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G10265.1	4.5e-16	58.33	Wound-responsive family protein	[more]
AT4G10270.1	2.9e-15	49.44	Wound-responsive family protein	[more]
AT4G33560.1	5.7e-11	39.77	Wound-responsive family protein	[more]
AT2G14070.1	4.7e-05	33.00	wound-responsive protein-related	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022251	Protein of unknown function wound-induced	PFAM	PF12609	DUF3774	coord: 12..85 e-value: 4.6E-26 score: 91.6
IPR022251	Protein of unknown function wound-induced	PANTHER	PTHR33090	DUF3774 DOMAIN PROTEIN-RELATED	coord: 4..90
None	No IPR available	PANTHER	PTHR33090:SF69	WOUND-RESPONSIVE FAMILY PROTEIN	coord: 4..90

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G05820.1	CSPI03G05820.1	mRNA