CSPI03G05200 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI03G05200
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Protein of unknown function (DUF3511)
Location	Chr3: 4226052 .. 4226633 (-)
RNA-Seq Expression	CSPI03G05200
Synteny	CSPI03G05200

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAAAACCCAAAACTTGTTTTCCACCCCTTTCTCCTCTCTTCCTCTCAATCCCATTCACTCTCAACTTTAAAAACTAAACATAGAAACTACGATGGAAGGGCTCCACCACCACCCAAACAAGGGTGGTCGGAGCCTGGAAGTCATAGACGTGAGAAAATTGAGTGTAAACAAGGTGTACCTAAACCAGTCACAGAGGCGAACTGTCGTCGACCCTTCGTTTGTGAAACAATATGTGACGAAGACATCGGAACCGTCGAAAAGTTGTATGAAGAAGCCATGGTGGAAGAAACCAGAAATGAGGAGACGACAACGCGTTGCTAAGTACAAATTGTATGGAGTTGAAGGGAAGGTAAAGAGATCAATAAAGAAAGGGATCAGGTGGATCAAAACCAAGTGTAGCAGAATTATATCTGGGTTTTGAAAATATTATTCTTTCTAAATCTTATATTGTAAAATAAAAAAGCATTATTTATAAGAAAAAACCATACTTCAATTTCATGGTTTTTTTCTTCTTCTTTTTCACGTTATTTCTGTGGAGACGCTCTTAAACATAACGTTAACGTTAAGATGATTGATTATCA

mRNA sequence

CAAAAACCCAAAACTTGTTTTCCACCCCTTTCTCCTCTCTTCCTCTCAATCCCATTCACTCTCAACTTTAAAAACTAAACATAGAAACTACGATGGAAGGGCTCCACCACCACCCAAACAAGGGTGGTCGGAGCCTGGAAGTCATAGACGTGAGAAAATTGAGTGTAAACAAGGTGTACCTAAACCAGTCACAGAGGCGAACTGTCGTCGACCCTTCGTTTGTGAAACAATATGTGACGAAGACATCGGAACCGTCGAAAAGTTGTATGAAGAAGCCATGGTGGAAGAAACCAGAAATGAGGAGACGACAACGCGTTGCTAAGTACAAATTGTATGGAGTTGAAGGGAAGGTAAAGAGATCAATAAAGAAAGGGATCAGGTGGATCAAAACCAAGTGTAGCAGAATTATATCTGGGTTTTGAAAATATTATTCTTTCTAAATCTTATATTGTAAAATAAAAAAGCATTATTTATAAGAAAAAACCATACTTCAATTTCATGGTTTTTTTCTTCTTCTTTTTCACGTTATTTCTGTGGAGACGCTCTTAAACATAACGTTAACGTTAAGATGATTGATTATCA

Coding sequence (CDS)

ATGGAAGGGCTCCACCACCACCCAAACAAGGGTGGTCGGAGCCTGGAAGTCATAGACGTGAGAAAATTGAGTGTAAACAAGGTGTACCTAAACCAGTCACAGAGGCGAACTGTCGTCGACCCTTCGTTTGTGAAACAATATGTGACGAAGACATCGGAACCGTCGAAAAGTTGTATGAAGAAGCCATGGTGGAAGAAACCAGAAATGAGGAGACGACAACGCGTTGCTAAGTACAAATTGTATGGAGTTGAAGGGAAGGTAAAGAGATCAATAAAGAAAGGGATCAGGTGGATCAAAACCAAGTGTAGCAGAATTATATCTGGGTTTTGA

Protein sequence

MEGLHHHPNKGGRSLEVIDVRKLSVNKVYLNQSQRRTVVDPSFVKQYVTKTSEPSKSCMKKPWWKKPEMRRRQRVAKYKLYGVEGKVKRSIKKGIRWIKTKCSRIISGF*

Homology

[Close]

BLAST of CSPI03G05200 vs. ExPASy TrEMBL
Match: A0A0A0L7N5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G077700 PE=4 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 6.1e-55
Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 0


Query: 1   MEGLHHHPNKGGRSLEVIDVRKLSVNKVYLNQSQRRTVVDPSFVKQYVTKTSEPSKSCMK 60
           MEGLHHHPNKGGRSLEVIDVRKLSVNKVYLNQSQRRTVVDPSFVKQYVTKTSEPSKSCMK
Sbjct: 1   MEGLHHHPNKGGRSLEVIDVRKLSVNKVYLNQSQRRTVVDPSFVKQYVTKTSEPSKSCMK 60

Query: 61  KPWWKKPEMRRRQRVAKYKLYGVEGKVKRSIKKGIRWIKTKCSRIISGF 110
           KPWWKKPEMRRRQRVAKYKLYGVEGKVKRSIKKGIRWIKTKCSRIISGF
Sbjct: 61  KPWWKKPEMRRRQRVAKYKLYGVEGKVKRSIKKGIRWIKTKCSRIISGF 109

[Close]

BLAST of CSPI03G05200 vs. ExPASy TrEMBL
Match: A0A5D3BTT8 (DUF3511 domain protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold925G00370 PE=4 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 3.3e-45
Identity = 96/109 (88.07%), Postives = 100/109 (91.74%), Query Frame = 0


Query: 1   MEGLHHHPNKGGRSLEVIDVRKLSVNKVYLNQSQRRTVVDPSFVKQYVTKTSEPSKSCMK 60
           MEGLHHH NKGGRSLEV+DVRKLS NK+YLNQSQRRTVVDPSFVK+YVTKT EPSK  MK
Sbjct: 1   MEGLHHHQNKGGRSLEVMDVRKLSENKMYLNQSQRRTVVDPSFVKRYVTKTWEPSK--MK 60

Query: 61  KPWWKKPEMRRRQRVAKYKLYGVEGKVKRSIKKGIRWIKTKCSRIISGF 110
           K WWKKPEM+RRQRVAKYKLY VEGKVK SIKKG RWIKTKCSRIISGF
Sbjct: 61  KSWWKKPEMKRRQRVAKYKLYAVEGKVKSSIKKGFRWIKTKCSRIISGF 107

[Close]

BLAST of CSPI03G05200 vs. ExPASy TrEMBL
Match: A0A6J1DCB3 (uncharacterized protein LOC111019023 OS=Momordica charantia OX=3673 GN=LOC111019023 PE=4 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 6.1e-31
Identity = 74/111 (66.67%), Postives = 87/111 (78.38%), Query Frame = 0


Query: 1   MEGLHHHPNKGGRSLEVIDVRKLSVNKVYLNQSQRRTVVD--PSFVKQYVTKTSEPSKSC 60
           MEG+H  P KGGRSLE+IDVR LS NK+ L+QS+ R  VD  PS  +Q + K SE SKS 
Sbjct: 1   MEGIHRRPKKGGRSLEIIDVRNLSENKLSLSQSRSRAAVDPSPSTKRQAIKKPSESSKSS 60

Query: 61  MKKPWWKKPEMRRRQRVAKYKLYGVEGKVKRSIKKGIRWIKTKCSRIISGF 110
           +K  WWK PEM+RR+RVAKYKLY VEGKVK SIKKGI+W KT+CSRI+SGF
Sbjct: 61  VKS-WWKNPEMKRRRRVAKYKLYTVEGKVKNSIKKGIKWFKTRCSRIMSGF 110

[Close]

BLAST of CSPI03G05200 vs. ExPASy TrEMBL
Match: A0A5D3BBI7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1159G00320 PE=4 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 9.8e-29
Identity = 68/110 (61.82%), Postives = 85/110 (77.27%), Query Frame = 0


Query: 1   MEGLHHHPNKGGRSLEVIDVRKLSVNKVYLNQSQRRTVVDPSFVKQYVTK-TSEPSKSCM 60
           ME +H  PNKG R+L++IDVRKLS NK++LNQS+R + +DPS +K    K TSE SK+  
Sbjct: 3   MERVHRRPNKGDRNLKIIDVRKLSENKMHLNQSRRHSTIDPSSMKPRAIKTTSESSKAST 62

Query: 61  KKPWWKKPEMRRRQRVAKYKLYGVEGKVKRSIKKGIRWIKTKCSRIISGF 110
            K WWK  EM+RR+RVAKYKLY VEG+VK SI+KGI W K +C+RIISGF
Sbjct: 63  VKLWWKNSEMKRRRRVAKYKLYTVEGRVKESIRKGINWFKCRCTRIISGF 112

[Close]

BLAST of CSPI03G05200 vs. ExPASy TrEMBL
Match: A0A0A0LL30 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G123580 PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 5.9e-26
Identity = 68/110 (61.82%), Postives = 84/110 (76.36%), Query Frame = 0


Query: 1   MEGLHHHPNKGGRSLEVIDVRKLSVNKVYLNQSQRRTVVDPSFVKQYVTKT-SEPSKSCM 60
           MEG+H  PNKG R+L +IDVRKLS NK++LNQS R++ ++PS VK    KT SE SK+  
Sbjct: 39  MEGVHRRPNKGDRNLRIIDVRKLSENKIHLNQSGRQSTMNPSSVKPRGMKTASESSKTSG 98

Query: 61  KKPWWKKPEMRRRQRVAKYKLYGVEGKVKRSIKKGIRWIKTKCSRIISGF 110
            K W KK E++RR+RVAKYKLY VEGKVK SI+KGI W K K +RI+SGF
Sbjct: 99  GKSWGKKLEVKRRRRVAKYKLYTVEGKVKDSIRKGINWFKCKYTRIMSGF 148

[Close]

BLAST of CSPI03G05200 vs. NCBI nr
Match: KGN56136.1 (hypothetical protein Csa_009524 [Cucumis sativus])

HSP 1 Score: 223.0 bits (567), Expect = 1.3e-54
Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 0


Query: 1   MEGLHHHPNKGGRSLEVIDVRKLSVNKVYLNQSQRRTVVDPSFVKQYVTKTSEPSKSCMK 60
           MEGLHHHPNKGGRSLEVIDVRKLSVNKVYLNQSQRRTVVDPSFVKQYVTKTSEPSKSCMK
Sbjct: 1   MEGLHHHPNKGGRSLEVIDVRKLSVNKVYLNQSQRRTVVDPSFVKQYVTKTSEPSKSCMK 60

Query: 61  KPWWKKPEMRRRQRVAKYKLYGVEGKVKRSIKKGIRWIKTKCSRIISGF 110
           KPWWKKPEMRRRQRVAKYKLYGVEGKVKRSIKKGIRWIKTKCSRIISGF
Sbjct: 61  KPWWKKPEMRRRQRVAKYKLYGVEGKVKRSIKKGIRWIKTKCSRIISGF 109

[Close]

BLAST of CSPI03G05200 vs. NCBI nr
Match: KAA0033960.1 (DUF3511 domain protein [Cucumis melo var. makuwa] >TYK02584.1 DUF3511 domain protein [Cucumis melo var. makuwa])

HSP 1 Score: 190.7 bits (483), Expect = 6.9e-45
Identity = 96/109 (88.07%), Postives = 100/109 (91.74%), Query Frame = 0


Query: 1   MEGLHHHPNKGGRSLEVIDVRKLSVNKVYLNQSQRRTVVDPSFVKQYVTKTSEPSKSCMK 60
           MEGLHHH NKGGRSLEV+DVRKLS NK+YLNQSQRRTVVDPSFVK+YVTKT EPSK  MK
Sbjct: 1   MEGLHHHQNKGGRSLEVMDVRKLSENKMYLNQSQRRTVVDPSFVKRYVTKTWEPSK--MK 60

Query: 61  KPWWKKPEMRRRQRVAKYKLYGVEGKVKRSIKKGIRWIKTKCSRIISGF 110
           K WWKKPEM+RRQRVAKYKLY VEGKVK SIKKG RWIKTKCSRIISGF
Sbjct: 61  KSWWKKPEMKRRQRVAKYKLYAVEGKVKSSIKKGFRWIKTKCSRIISGF 107

[Close]

BLAST of CSPI03G05200 vs. NCBI nr
Match: XP_022151002.1 (uncharacterized protein LOC111019023 [Momordica charantia])

HSP 1 Score: 143.3 bits (360), Expect = 1.3e-30
Identity = 74/111 (66.67%), Postives = 87/111 (78.38%), Query Frame = 0


Query: 1   MEGLHHHPNKGGRSLEVIDVRKLSVNKVYLNQSQRRTVVD--PSFVKQYVTKTSEPSKSC 60
           MEG+H  P KGGRSLE+IDVR LS NK+ L+QS+ R  VD  PS  +Q + K SE SKS 
Sbjct: 1   MEGIHRRPKKGGRSLEIIDVRNLSENKLSLSQSRSRAAVDPSPSTKRQAIKKPSESSKSS 60

Query: 61  MKKPWWKKPEMRRRQRVAKYKLYGVEGKVKRSIKKGIRWIKTKCSRIISGF 110
           +K  WWK PEM+RR+RVAKYKLY VEGKVK SIKKGI+W KT+CSRI+SGF
Sbjct: 61  VKS-WWKNPEMKRRRRVAKYKLYTVEGKVKNSIKKGIKWFKTRCSRIMSGF 110

[Close]

BLAST of CSPI03G05200 vs. NCBI nr
Match: KAG7017168.1 (hypothetical protein SDJN02_22280, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 138.3 bits (347), Expect = 4.1e-29
Identity = 70/110 (63.64%), Postives = 86/110 (78.18%), Query Frame = 0


Query: 1   MEGLHHHPNK-GGRSLEVIDVRKLSVNKVYLNQSQRRTVVDPSFVKQYVTKTSEPSKSCM 60
           MEG+H  P+K GGRSLEVIDVRKLS N+V+L+QS+R   +DPS VK  V KT E S+   
Sbjct: 1   MEGVHRRPSKGGGRSLEVIDVRKLSENQVHLSQSRRPAAMDPSAVKPRVVKTGEGSRGGS 60

Query: 61  KKPWWKKPEMRRRQRVAKYKLYGVEGKVKRSIKKGIRWIKTKCSRIISGF 110
              WWK PEM+R++RVAKYKLY VEG+VK SIKKG+RW K++CSRI+ GF
Sbjct: 61  GNSWWKNPEMKRQRRVAKYKLYTVEGRVKDSIKKGMRWFKSRCSRIVYGF 110

[Close]

BLAST of CSPI03G05200 vs. NCBI nr
Match: KAA0032381.1 (hypothetical protein E6C27_scaffold219G002520 [Cucumis melo var. makuwa] >TYJ96369.1 hypothetical protein E5676_scaffold1159G00320 [Cucumis melo var. makuwa])

HSP 1 Score: 136.0 bits (341), Expect = 2.0e-28
Identity = 68/110 (61.82%), Postives = 85/110 (77.27%), Query Frame = 0


Query: 1   MEGLHHHPNKGGRSLEVIDVRKLSVNKVYLNQSQRRTVVDPSFVKQYVTK-TSEPSKSCM 60
           ME +H  PNKG R+L++IDVRKLS NK++LNQS+R + +DPS +K    K TSE SK+  
Sbjct: 3   MERVHRRPNKGDRNLKIIDVRKLSENKMHLNQSRRHSTIDPSSMKPRAIKTTSESSKAST 62

Query: 61  KKPWWKKPEMRRRQRVAKYKLYGVEGKVKRSIKKGIRWIKTKCSRIISGF 110
            K WWK  EM+RR+RVAKYKLY VEG+VK SI+KGI W K +C+RIISGF
Sbjct: 63  VKLWWKNSEMKRRRRVAKYKLYTVEGRVKESIRKGINWFKCRCTRIISGF 112

[Close]

BLAST of CSPI03G05200 vs. TAIR 10
Match: AT3G05725.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 67.8 bits (164), Expect = 6.3e-12
Identity = 40/108 (37.04%), Postives = 64/108 (59.26%), Query Frame = 0


Query: 10  KGGRSLEVIDVRKLS-VNKVYL------NQSQRRTVV--DPSFVKQYVTKTSEPSKSCMK 69
           +G R+L++++   L  V  +Y+      N+S  +T +    S+    V      S S + 
Sbjct: 16  EGDRNLQLVNPADLKLVRGIYVVRESRRNRSPIKTDIWRKMSYKDMPVRPRRSSSHSTLF 75

Query: 70  KPWWKKPEMRRRQRVAKYKLYGVEGKVKRSIKKGIRWIKTKCSRIISG 109
           K WW  PE++R++RVAKYKLY  EGK+K +++K  +WIK +CS+II G
Sbjct: 76  KGWWNDPEIKRKRRVAKYKLYSAEGKMKITLRKSYKWIKIQCSKIIHG 123

[Close]

BLAST of CSPI03G05200 vs. TAIR 10
Match: AT2G47480.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 57.4 bits (137), Expect = 8.5e-09
Identity = 24/42 (57.14%), Postives = 33/42 (78.57%), Query Frame = 0


Query: 68  EMRRRQRVAKYKLYGVEGKVKRSIKKGIRWIKTKCSRIISGF 110
           EM+R++R+A+YK Y VEGKVK ++K G RWIK KC +I+  F
Sbjct: 69  EMKRKKRIARYKAYTVEGKVKSTLKNGFRWIKNKCCQIVHRF 110

[Close]

BLAST of CSPI03G05200 vs. TAIR 10
Match: AT5G11970.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 51.6 bits (122), Expect = 4.7e-07
Identity = 24/56 (42.86%), Postives = 38/56 (67.86%), Query Frame = 0


Query: 56  KSCMKKPWW--KKPEMRRRQRVAKYKLYGVEGKVKRSIKKGIRWIKTKCSRIISGF 110
           KS  +   W    PE++R++RVA YK+YGVEGKVK S +   RW+K + ++++ G+
Sbjct: 49  KSIARSKSWGITDPELQRKKRVASYKMYGVEGKVKGSFRNSFRWLKQRYTQVVYGW 104

[Close]

BLAST of CSPI03G05200 vs. TAIR 10
Match: AT3G62640.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 50.8 bits (120), Expect = 7.9e-07
Identity = 22/41 (53.66%), Postives = 30/41 (73.17%), Query Frame = 0


Query: 68  EMRRRQRVAKYKLYGVEGKVKRSIKKGIRWIKTKCSRIISG 109
           E +R++R+A YK Y +EGKVK ++KKG  WIK + S II G
Sbjct: 70  ETKRKKRIATYKTYALEGKVKSTVKKGFHWIKDRYSHIIHG 110

[Close]

BLAST of CSPI03G05200 vs. TAIR 10
Match: AT1G72720.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 49.3 bits (116), Expect = 2.3e-06
Identity = 27/71 (38.03%), Postives = 42/71 (59.15%), Query Frame = 0


Query: 40  DPSFVKQYVTKTSEPSKSCMKKPW--WKKPEMRRRQRVAKYKLYGVEGKVKRSIKKGIRW 99
           +P+ V+      S+ S    KK +    + E++R++RVA Y +YGVEG+VK S+KK  +W
Sbjct: 55  NPTIVRDDSNNKSKRSNKVKKKGFKGLCEAEIQRKKRVASYNVYGVEGRVKGSMKKSFKW 114

Query: 100 IKTKCSRIISG 109
            K  CS  + G
Sbjct: 115 FKETCSNAVYG 125

The following BLAST results are available for this feature:

BLAST of CSPI03G05200 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI03G05200 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L7N5	6.1e-55	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G077700 PE=4 SV=1	[more]
A0A5D3BTT8	3.3e-45	88.07	DUF3511 domain protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold9...	[more]
A0A6J1DCB3	6.1e-31	66.67	uncharacterized protein LOC111019023 OS=Momordica charantia OX=3673 GN=LOC111019...	[more]
A0A5D3BBI7	9.8e-29	61.82	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0LL30	5.9e-26	61.82	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G123580 PE=4 SV=1	[more]

BLAST of CSPI03G05200 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN56136.1	1.3e-54	100.00	hypothetical protein Csa_009524 [Cucumis sativus]	[more]
KAA0033960.1	6.9e-45	88.07	DUF3511 domain protein [Cucumis melo var. makuwa] >TYK02584.1 DUF3511 domain pro...	[more]
XP_022151002.1	1.3e-30	66.67	uncharacterized protein LOC111019023 [Momordica charantia]	[more]
KAG7017168.1	4.1e-29	63.64	hypothetical protein SDJN02_22280, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAA0032381.1	2.0e-28	61.82	hypothetical protein E6C27_scaffold219G002520 [Cucumis melo var. makuwa] >TYJ963...	[more]

BLAST of CSPI03G05200 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G05725.1	6.3e-12	37.04	Protein of unknown function (DUF3511)	[more]
AT2G47480.1	8.5e-09	57.14	Protein of unknown function (DUF3511)	[more]
AT5G11970.1	4.7e-07	42.86	Protein of unknown function (DUF3511)	[more]
AT3G62640.1	7.9e-07	53.66	Protein of unknown function (DUF3511)	[more]
AT1G72720.1	2.3e-06	38.03	Protein of unknown function (DUF3511)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021899	Protein of unknown function DUF3511	PFAM	PF12023	DUF3511	coord: 64..108 e-value: 6.7E-22 score: 77.0
None	No IPR available	PANTHER	PTHR33193:SF13	DOMAIN PROTEIN, PUTATIVE (DUF3511)-RELATED	coord: 9..109
None	No IPR available	PANTHER	PTHR33193	DOMAIN PROTEIN, PUTATIVE (DUF3511)-RELATED	coord: 9..109

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G05200.1	CSPI03G05200.1	mRNA