CSPI03G05130 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI03G05130
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12
Location	Chr3: 4157491 .. 4162695 (+)
RNA-Seq Expression	CSPI03G05130
Synteny	CSPI03G05130

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTAACACTTTGACATTGTTTCACATCTTCATCAACCCTTTTTCCTTCATCTTAAATTGTGTATTTATCCCAATTTTTTCTACAAAATAAACATCATATTCATACCGTAGGATCTTCGATACAAAATTCGATTCCGACTATTTTAATTCAGGGGACAAGAAGGAAGAAAAATCGAGGGATCTCCAAATTCAGAGCTTAAACCGAGAGAGAGCACGATCTTAAGGCAAGTCTACAATGGGGAGAGCATAATTTTTCTGGAGTGGAAGAGGAGAAAGAAATTTTGGGATATGAATGCTCTGTAATACCCCCATCAAACGGTGGTTGGAACGAAGATAATGTCGAAACTTTTTGGGAAAATTGCTGCTTTCTTCAGCAATAGAACTCTGGTGGGAGTGGACAAAGCGGGAAACAGATACTTCTTCGTAAAAGAAGAAATAGATGGTATAAGTAAGTAGGTCTAAATACCCTTTCTTTTCTATTTCTATATTTTCCTTTCTTAGATTGCATTTGATCTTGAATGAGGTTCTTTCTTTGGGTTGCATTTTGAATTTCTAGATTTTTTCACTTATTTGTTTTTAAAAATTTGTTCTCTTTGTTTCTTTGTGCATTTCCTGTTCCATTGATCAATTTTAATTAAACAGTATTGGAAGTATAAAAGTACAGAAGAACTTAGCATCTAACTGATTTTGAACTGTGGAAAGCCACAGTTTTCTAAGCCCACCGTTGAACCTTTGCAATTGAGTTTAAAAATTGTACGCCATGTGTTGTTTTTTAGTTTTTTGAAAATTAAGCCTCCGAACACCACTTCTACATCTAAATATCTTGCTTTGTTATCTACTTTTTAAAAATCAAGTGGCCTAGTGTTAAAAAATCTGTCTCAATAACTAACTAAGAATAACTAAGAGTTCATAGAATTAATTTCCTACTAGTTTCCTTGACACCCAAATGTTCTAGGGACAGTTGGGTTCTCTCGGTGAGATTAGTTGAGGTGCCCGTAAGTTGCCCCGAACACTCGCGGATATGAAAAAAACTTGTTTTTGTTTTTGGAATTTGACATAGAATTCAACTTTTGTACTTGAAGAAATATGCAAGACATTGTAAGAAAATATCTTTTTGCACAGTTGTACTCAACATTAAGTGGATGATGTTCATGAGAAATGGAGAGAGAGCGCTCATGAATTAGGGTGATACATAGGTAGCTGCCTTTGTTGTTTATAGGATGAAACTTCTATCATTGGACATATACAGCTCACGCAATTTTCACTCTTTGGTTTGCTAGTGAAAGAGAAGAGATGGGTGCTATTTAAGGGTGAGGATGATCCAACGTCAATTCCAGGTAAGCATTTATGGACCTATGTTTAAGACTTATGAATTAGGAGAAGGGCTTTGTTATTTGAATCATCCGATTATGTCATTTTTAAATCACGGTTTAAGATATAGTACCAGTTTTGGGAACATATCCAGTTTTGGGAACTTGAATGATTATTAACATGAGCTGGATATGTAGTCTAGAAAGAACCGAATTTGCTGATGTTAGGTTTTCCTGATGATGATTGCTTATATTTTATTGCTGCAGTGGAGTGGATATGTTGGTTAAATGGGCAGCGTAAAAAGGCTCCAACCCCAGAGGTAACCCATTACCTTCTTCCACGACCAACTGATCTTTGCATTCCACTTGAATGATCAGAGGATTTGTGATTGGTGTGCTACGCAGGATTTGATATTTATATTGTTTGTTCTTTTGCCATTGTCTTCAGGAAATGAGGGAGCTAGAAGCTAGGCGTGAACGCGTACGACAAAATGTTGCTCGTATGTTGACTCTTCAATAAAATTTTGCATCTTATTACTTGGTTGTTCATGACTGAACATTTTTCTACATTATGTAATTATCATCGTCAACTTCTCTATATCAAAATTGTGACTTATATACAGGAAGAAAGGTATGAATTGCATTGTACCTGAAATTGCCACATAGAGGTCACCCAAACATATTCATATTTGAGAATTAATTCTCTTAGAGTCCCATTTGGTAACTATTTCACTTTTTTTTTTTTTTGATTTTTGGAAATTAAGCCTATAAACACTTTTTACCCATGTTCTCATAAACGAAGTAAAATTTTGAAAACTAAGAAAAGTAGTCTTTAATAGCTTGTTTTTGTTTTTGGAATATGGCCAAGAATGCAACTCTTCTACTTGAAGATTGATACAAACCATGGTAAGAAAATCGGCTTATTTTCAAAAAACAAAATGGTTACCAAATGAGGCTGTAGGAATTGATGATTGACTTTATAATCTTACTCAAGACATTCTTACCAAGGTCTTCTTTCCTGCCTTAGTAGATAAGTTTTTCTGTAACCATCTTTTTATGAGGTATAAAAGCAATTATCATTTGATTTTGCAGTTCAGAATTAAATTTTATTTGATACTTTTAGAAGAACCAATATCATTCTCATTCTTTGACTTAACATGGTCTAACTGGAAGTTATCTGTGATCAATTTAGTTCTCAAGAAAGAAGAGATGGAAAGAAACTCTAAAGAAGGCAATTTACGGAAAATCATCAGCACCGGTCAGTTGCTTATTGACAAAAACTTAAGTGCTTGTTACACTTGTAGCATATAGCTAATATTCATTTGCTGCATAGGTCAAGTTATGGGTCCTGACTTGAAAAGCTTTATCCGACAGGTCCCAACTGGTTCAGAAGGTATTATTTGATTTCATTTTGTATTTTCTCACCCCCTTAATCTCCTCCCCACTCCTCACCAAGAGAAAAGAAATGTGATTACATTCAATCCTTAAATAGGATTTTTTTAAGAGCCATGGAGCTCAATGGTTTAAAAGGCTCTTGATATCAATGTTTTAAGAGGCTATTGAGGTTTATGCCTCCTTGAGGCTCGCCCCAAGGCAAGACTCTAACTTTTAACCTTGAGACTTGTGTTTATAAAAATGCACTGAGTGACTGAAGTTTAACGATTATAAAAATAATATTATTTTTCCCCATTCTTCAAATACATAAAAGGTTTGATTTGTGATAAATTGAGCTATTATTATTACAATTACTACAAAAAAATTATCATTGATATAACGGAAAGAAAATTAATGTTCAAGGGTTACAAACTCTCGAGACTTGAAGGAAGTGAAAGTAAAACATAATCAGGAACTTTGAAACAATTACAGTTCTCTTCCTAATGCACTTTATTTTGAGCTATTACTAATTTCATATCGTGGCTTTAAGAGTGTCCAAACATAAAATTTTAGGATAAATCATATAATAATAGTAGTGATATTGATGTTAAAGATAACCTGTGGCACTTGGCAATGGTGATTATGTACACACACACTTTATGATTATGATGTTCAGTAACACCTAGTCAGTTCAATTTTAGGATTTGTAAAATATTTTCATCAAATTTGAGGCTTGCACCGCACCTAGAGGAAAGCCTCAAGATTGCATTTAGGCCTTTTCCCAATTGGAAAAAAAAGCATTTTTTATTTTAAATAATCATTTGGAATGATCTAAGTTTTTCCTCTTGTTGGCTGATTAATTCCATGTACCTCTTCTGGTCATGTGTAACTCTCCCAAATTTGATAGTTCATTTCATTTGGACTTGAGTATATTATACCGATTGGATGTTTACACTCAGTTCATTCATTTTGGTATTTCTTGTTCAAAGGTGCCCAAGATGTGGAAGGATTGCCTACAAGGGATAGCCTGAGGTGGGCCATTCATTTTGAATTTTATACTGCTATTTTCTTTTTCTATATTGGTGAGGTGACATAAATATTGGTTAACTGTCTTCTTTTTTCTCAATGTTATGGGCATATCATGGGCAGAAATATTTAAATGTACTTTTCTGTGTAGTTCACCACTGATATTTCTCTATTTATTTTCTCCTCAATATTGCTCATTGGTCCAGTGTGCTAGGAGTTTGAGTTAATAGTTTGAATGCATCGAAGGACCAAGAATTTAGAGCAAGTCTATATTACCGAATGACTTATTGATTGTTATTCTTTCTGAGTTTGCTAGTTAAATAGTAGTATGATCGTTATGTCATTGGTTTGCTGTTAAAAACATGTGAAACTTTCTGGTGCAATGTGCTTATGCTTAAAGAACTATTCCTCTCCTCTTGTAACGTGGATTTACCTTTGCTTCAACCACCAGGAACTCAAACGAAAAGGAGGCAGTTCAAGAAAAACCAATTCCCGAGTAAGTTGATTTTTTTTTTTTTTTTCCCCAACTCAATAGTCATAAATGTCAATATTAGATTGCATAGGATTCATGTTGACATTAGATACAAGGGATTATGAAGGTTGGCATATCTTTTACCTTTTCAGAAAAAAGGAAAACAACAAAGTGCCTATTGAATACCAAAAAGTTCCCATTCTTTCATATTCAGGTCCTCCGAGCCTGTTGGGTCTGGCCATACATTTAAACCAGGAACATGGCAGCCACCAACATGAATGGTGATTGCCCTTCAAGGAGAACTCGCGAACATTAAAGCTAGCAGTTCGTTCTATTCCCAACAATTGGTAAGCTTCTGAGTTCCGATTCCTTACCTTCTACTTTTTCTGAGGACATGCCCTTCTACTTGACTGTATCAGATCCTGCCCTCCGAAGGTCTAAAACAAGATTGTCACTCTGCATTGCCTTGGTTTTCAAATGGTCATATGTAGTATTTGTCTGATGAAAAGCAGTTGTTACTTAAATTTTATGTAGTAAGTTCAATAAGTATCCTTATAGAATACTTGTGACAGTTTTGACCTCCCCCATTCTATCTAGAGGCTGAGAAAAGTAACTTGCAATTGTCGGTAGCAGCATTCCCTTGGAAGATTCACTGTGGGATTGATATCATTCCTGTTGGTTATGATTTGATTTGTAAAACATTTTATCCCAGATTGGTTGGAATTCATTGTAATAATGTTTTCAGGCTCAGCTTGAGGGATTAATAGTGTTGATGCATTCGATATTTTGTTGTGTGCTCCTGCTACTAACATTTGTGGGGGTATAAGGATAGAAATGGGAAGCCTGAGAACATGATGTTAGGGCATAGGAATAGGATTAATGTGTGATTGTTTAGGCCTTTGAGAATGAGAATTTTGGAGATTTTTATTTCATTTGGCTGTCTAGACTATTATATTTTTGTCCTAAACTAATTCATTATATAAAGTTTATTTACCCTGTATGATAGGATCGGGGGTTTCGAAGCA

mRNA sequence

GTAACACTTTGACATTGTTTCACATCTTCATCAACCCTTTTTCCTTCATCTTAAATTGTGTATTTATCCCAATTTTTTCTACAAAATAAACATCATATTCATACCGTAGGATCTTCGATACAAAATTCGATTCCGACTATTTTAATTCAGGGGACAAGAAGGAAGAAAAATCGAGGGATCTCCAAATTCAGAGCTTAAACCGAGAGAGAGCACGATCTTAAGGCAAGTCTACAATGGGGAGAGCATAATTTTTCTGGAGTGGAAGAGGAGAAAGAAATTTTGGGATATGAATGCTCTGTAATACCCCCATCAAACGGTGGTTGGAACGAAGATAATGTCGAAACTTTTTGGGAAAATTGCTGCTTTCTTCAGCAATAGAACTCTGGTGGGAGTGGACAAAGCGGGAAACAGATACTTCTTCGTAAAAGAAGAAATAGATGGTATAATGAAAGAGAAGAGATGGGTGCTATTTAAGGGTGAGGATGATCCAACGTCAATTCCAGTGGAGTGGATATGTTGGTTAAATGGGCAGCGTAAAAAGGCTCCAACCCCAGAGGAAATGAGGGAGCTAGAAGCTAGGCGTGAACGCGTACGACAAAATGTTGCTCTTCTCAAGAAAGAAGAGATGGAAAGAAACTCTAAAGAAGGCAATTTACGGAAAATCATCAGCACCGGTCAAGTTATGGGTCCTGACTTGAAAAGCTTTATCCGACAGGTCCCAACTGGTTCAGAAGGTGCCCAAGATGTGGAAGGATTGCCTACAAGGGATAGCCTGAGGAACTCAAACGAAAAGGAGGCAGTTCAAGAAAAACCAATTCCCGAGTCCTCCGAGCCTGTTGGGTCTGGCCATACATTTAAACCAGGAACATGGCAGCCACCAACATGAATGGTGATTGCCCTTCAAGGAGAACTCGCGAACATTAAAGCTAGCAGTTCGTTCTATTCCCAACAATTGGTAAGCTTCTGAGTTCCGATTCCTTACCTTCTACTTTTTCTGAGGACATGCCCTTCTACTTGACTGTATCAGATCCTGCCCTCCGAAGGTCTAAAACAAGATTGTCACTCTGCATTGCCTTGGTTTTCAAATGGTCATATGTAGTATTTGTCTGATGAAAAGCAGTTGTTACTTAAATTTTATGTAGTAAGTTCAATAAGTATCCTTATAGAATACTTGTGACAGTTTTGACCTCCCCCATTCTATCTAGAGGCTGAGAAAAGTAACTTGCAATTGTCGGTAGCAGCATTCCCTTGGAAGATTCACTGTGGGATTGATATCATTCCTGTTGGTTATGATTTGATTTGTAAAACATTTTATCCCAGATTGGTTGGAATTCATTGTAATAATGTTTTCAGGCTCAGCTTGAGGGATTAATAGTGTTGATGCATTCGATATTTTGTTGTGTGCTCCTGCTACTAACATTTGTGGGGGTATAAGGATAGAAATGGGAAGCCTGAGAACATGATGTTAGGGCATAGGAATAGGATTAATGTGTGATTGTTTAGGCCTTTGAGAATGAGAATTTTGGAGATTTTTATTTCATTTGGCTGTCTAGACTATTATATTTTTGTCCTAAACTAATTCATTATATAAAGTTTATTTACCCTGTATGATAGGATCGGGGGTTTCGAAGCA

Coding sequence (CDS)

ATGTCGAAACTTTTTGGGAAAATTGCTGCTTTCTTCAGCAATAGAACTCTGGTGGGAGTGGACAAAGCGGGAAACAGATACTTCTTCGTAAAAGAAGAAATAGATGGTATAATGAAAGAGAAGAGATGGGTGCTATTTAAGGGTGAGGATGATCCAACGTCAATTCCAGTGGAGTGGATATGTTGGTTAAATGGGCAGCGTAAAAAGGCTCCAACCCCAGAGGAAATGAGGGAGCTAGAAGCTAGGCGTGAACGCGTACGACAAAATGTTGCTCTTCTCAAGAAAGAAGAGATGGAAAGAAACTCTAAAGAAGGCAATTTACGGAAAATCATCAGCACCGGTCAAGTTATGGGTCCTGACTTGAAAAGCTTTATCCGACAGGTCCCAACTGGTTCAGAAGGTGCCCAAGATGTGGAAGGATTGCCTACAAGGGATAGCCTGAGGAACTCAAACGAAAAGGAGGCAGTTCAAGAAAAACCAATTCCCGAGTCCTCCGAGCCTGTTGGGTCTGGCCATACATTTAAACCAGGAACATGGCAGCCACCAACATGA

Protein sequence

MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMERNSKEGNLRKIISTGQVMGPDLKSFIRQVPTGSEGAQDVEGLPTRDSLRNSNEKEAVQEKPIPESSEPVGSGHTFKPGTWQPPT*

Homology

[Close]

BLAST of CSPI03G05130 vs. ExPASy Swiss-Prot
Match: Q54MV7 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Dictyostelium discoideum OX=44689 GN=ndufa12 PE=2 SV=2)

HSP 1 Score: 48.5 bits (114), Expect = 9.3e-05
Identity = 26/59 (44.07%), Postives = 36/59 (61.02%), Query Frame = 0


Query: 16 TLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKG--EDDPTSIPVEWICWLNGQRKKAPT 73
          TLVGVDK GNRY+  ++EI G     RWV +     +DPT+IP E+  W++    K P+
Sbjct: 33 TLVGVDKVGNRYYENRQEIYG---RHRWVEYGDYKSNDPTTIPPEYHSWIHHVSDKLPS 88

[Close]

BLAST of CSPI03G05130 vs. ExPASy TrEMBL
Match: A0A0A0L526 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Cucumis sativus OX=3659 GN=Csa_3G077630 PE=3 SV=1)

HSP 1 Score: 364.4 bits (934), Expect = 2.8e-97
Identity = 182/183 (99.45%), Postives = 182/183 (99.45%), Query Frame = 0


Query: 1   MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWI 60
           MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWI
Sbjct: 1   MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWI 60

Query: 61  CWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMERNSKEGNLRKIISTGQVMGPD 120
           CWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMERNSKEGNLRKIISTGQVMGPD
Sbjct: 61  CWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMERNSKEGNLRKIISTGQVMGPD 120

Query: 121 LKSFIRQVPTGSEGAQDVEGLPTRDSLRNSNEKEAVQEKPIPESSEPVGSGHTFKPGTWQ 180
           LKSFIRQVPTGSEGAQDVEGLPTRDSLRNSNEKEA QEKPIPESSEPVGSGHTFKPGTWQ
Sbjct: 121 LKSFIRQVPTGSEGAQDVEGLPTRDSLRNSNEKEADQEKPIPESSEPVGSGHTFKPGTWQ 180

Query: 181 PPT 184
           PPT
Sbjct: 181 PPT 183

[Close]

BLAST of CSPI03G05130 vs. ExPASy TrEMBL
Match: A0A5A7SS01 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold400G00330 PE=3 SV=1)

HSP 1 Score: 355.5 bits (911), Expect = 1.3e-94
Identity = 176/183 (96.17%), Postives = 179/183 (97.81%), Query Frame = 0


Query: 1   MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWI 60
           MSKLFGKIA FFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWV+FKGEDDPTSIPVEWI
Sbjct: 1   MSKLFGKIAGFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWI 60

Query: 61  CWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMERNSKEGNLRKIISTGQVMGPD 120
           CWLNGQRKKAPTPEEM ELEARRERVRQNVALLKKEEMERNSKEG LRKIISTGQVMGPD
Sbjct: 61  CWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMERNSKEGKLRKIISTGQVMGPD 120

Query: 121 LKSFIRQVPTGSEGAQDVEGLPTRDSLRNSNEKEAVQEKPIPESSEPVGSGHTFKPGTWQ 180
           LKSFIRQVPTGSEGAQDVEGLPTRD+LRNSNEKE VQEKPIPESSEPVGSGHTF+PGTWQ
Sbjct: 121 LKSFIRQVPTGSEGAQDVEGLPTRDTLRNSNEKEPVQEKPIPESSEPVGSGHTFRPGTWQ 180

Query: 181 PPT 184
           PPT
Sbjct: 181 PPT 183

[Close]

BLAST of CSPI03G05130 vs. ExPASy TrEMBL
Match: A0A6J1DNE9 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Momordica charantia OX=3673 GN=LOC111022834 PE=3 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 2.0e-82
Identity = 154/183 (84.15%), Postives = 167/183 (91.26%), Query Frame = 0


Query: 1   MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWI 60
           MSKLFGKIA+FFS+RT+ GVDK+GN+YFF KEEIDG+MKEKRWV+FKGEDDPTSIPVEWI
Sbjct: 1   MSKLFGKIASFFSSRTMAGVDKSGNKYFFRKEEIDGLMKEKRWVVFKGEDDPTSIPVEWI 60

Query: 61  CWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMERNSKEGNLRKIISTGQVMGPD 120
           CWLNGQRKKAPTPEEM ELEARRERVRQNV LLKK+EMERNS+EGNLRK+IS  QV GPD
Sbjct: 61  CWLNGQRKKAPTPEEMMELEARRERVRQNVTLLKKQEMERNSREGNLRKVISADQVAGPD 120

Query: 121 LKSFIRQVPTGSEGAQDVEGLPTRDSLRNSNEKEAVQEKPIPESSEPVGSGHTFKPGTWQ 180
           L SFIRQ PTGSEGAQD EG   R+S RNS EKEAV+EKPIPESSEPVGSG TF+PGTWQ
Sbjct: 121 LNSFIRQFPTGSEGAQDEEGSAARNSPRNSKEKEAVKEKPIPESSEPVGSGQTFRPGTWQ 180

Query: 181 PPT 184
           PPT
Sbjct: 181 PPT 183

[Close]

BLAST of CSPI03G05130 vs. ExPASy TrEMBL
Match: A0A6J1JVV8 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Cucurbita maxima OX=3661 GN=LOC111487996 PE=3 SV=1)

HSP 1 Score: 310.5 bits (794), Expect = 4.8e-81
Identity = 155/183 (84.70%), Postives = 166/183 (90.71%), Query Frame = 0


Query: 1   MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWI 60
           MSKLF KIA FF++RTL+GVDKAGNRYFFVKEEIDGIMKEKRWV+FKGEDDPTSIPVEWI
Sbjct: 1   MSKLFKKIAGFFTDRTLMGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWI 60

Query: 61  CWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMERNSKEGNLRKIISTGQVMGPD 120
           CWLNGQRKKAPTPEEM ELEARRERVRQNVALLKKEEMER SKE NLRK++ST  V GP+
Sbjct: 61  CWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMERKSKESNLRKVVST--VAGPN 120

Query: 121 LKSFIRQVPTGSEGAQDVEGLPTRDSLRNSNEKEAVQEKPIPESSEPVGSGHTFKPGTWQ 180
           LKSFIRQ PTGSEGAQD EG   +DSLRNS E EA +EKPIPESSEP+GSG TF+PGTWQ
Sbjct: 121 LKSFIRQFPTGSEGAQDNEGSAAKDSLRNSEENEAAKEKPIPESSEPMGSGQTFRPGTWQ 180

Query: 181 PPT 184
           PPT
Sbjct: 181 PPT 181

[Close]

BLAST of CSPI03G05130 vs. ExPASy TrEMBL
Match: A0A6J1JSL7 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Cucurbita maxima OX=3661 GN=LOC111487996 PE=3 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 2.4e-80
Identity = 154/183 (84.15%), Postives = 165/183 (90.16%), Query Frame = 0


Query: 1   MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWI 60
           MSKLF KIA FF++RTL+GVDKAGNRYFFVKEEIDGIMKEKRWV+FKGEDDPTSIPVEWI
Sbjct: 1   MSKLFKKIAGFFTDRTLMGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWI 60

Query: 61  CWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMERNSKEGNLRKIISTGQVMGPD 120
           CWLNGQRKKAPTPEEM ELEARRERVRQNVALLKKEEMER SKE NLRK++ST    GP+
Sbjct: 61  CWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMERKSKESNLRKVVST----GPN 120

Query: 121 LKSFIRQVPTGSEGAQDVEGLPTRDSLRNSNEKEAVQEKPIPESSEPVGSGHTFKPGTWQ 180
           LKSFIRQ PTGSEGAQD EG   +DSLRNS E EA +EKPIPESSEP+GSG TF+PGTWQ
Sbjct: 121 LKSFIRQFPTGSEGAQDNEGSAAKDSLRNSEENEAAKEKPIPESSEPMGSGQTFRPGTWQ 179

Query: 181 PPT 184
           PPT
Sbjct: 181 PPT 179

[Close]

BLAST of CSPI03G05130 vs. NCBI nr
Match: XP_004152928.1 (uncharacterized protein LOC101214441 isoform X2 [Cucumis sativus] >KGN56129.1 hypothetical protein Csa_010369 [Cucumis sativus])

HSP 1 Score: 364.4 bits (934), Expect = 5.8e-97
Identity = 182/183 (99.45%), Postives = 182/183 (99.45%), Query Frame = 0


Query: 1   MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWI 60
           MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWI
Sbjct: 1   MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWI 60

Query: 61  CWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMERNSKEGNLRKIISTGQVMGPD 120
           CWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMERNSKEGNLRKIISTGQVMGPD
Sbjct: 61  CWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMERNSKEGNLRKIISTGQVMGPD 120

Query: 121 LKSFIRQVPTGSEGAQDVEGLPTRDSLRNSNEKEAVQEKPIPESSEPVGSGHTFKPGTWQ 180
           LKSFIRQVPTGSEGAQDVEGLPTRDSLRNSNEKEA QEKPIPESSEPVGSGHTFKPGTWQ
Sbjct: 121 LKSFIRQVPTGSEGAQDVEGLPTRDSLRNSNEKEADQEKPIPESSEPVGSGHTFKPGTWQ 180

Query: 181 PPT 184
           PPT
Sbjct: 181 PPT 183

[Close]

BLAST of CSPI03G05130 vs. NCBI nr
Match: KAA0033972.1 (NDUFA12 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 355.5 bits (911), Expect = 2.7e-94
Identity = 176/183 (96.17%), Postives = 179/183 (97.81%), Query Frame = 0


Query: 1   MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWI 60
           MSKLFGKIA FFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWV+FKGEDDPTSIPVEWI
Sbjct: 1   MSKLFGKIAGFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWI 60

Query: 61  CWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMERNSKEGNLRKIISTGQVMGPD 120
           CWLNGQRKKAPTPEEM ELEARRERVRQNVALLKKEEMERNSKEG LRKIISTGQVMGPD
Sbjct: 61  CWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMERNSKEGKLRKIISTGQVMGPD 120

Query: 121 LKSFIRQVPTGSEGAQDVEGLPTRDSLRNSNEKEAVQEKPIPESSEPVGSGHTFKPGTWQ 180
           LKSFIRQVPTGSEGAQDVEGLPTRD+LRNSNEKE VQEKPIPESSEPVGSGHTF+PGTWQ
Sbjct: 121 LKSFIRQVPTGSEGAQDVEGLPTRDTLRNSNEKEPVQEKPIPESSEPVGSGHTFRPGTWQ 180

Query: 181 PPT 184
           PPT
Sbjct: 181 PPT 183

[Close]

BLAST of CSPI03G05130 vs. NCBI nr
Match: XP_038903174.1 (uncharacterized protein LOC120089839 isoform X2 [Benincasa hispida])

HSP 1 Score: 349.0 bits (894), Expect = 2.5e-92
Identity = 174/183 (95.08%), Postives = 177/183 (96.72%), Query Frame = 0


Query: 1   MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWI 60
           MSKLFGKIA FFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWV+FKGEDDPTSIPVEWI
Sbjct: 1   MSKLFGKIAGFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWI 60

Query: 61  CWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMERNSKEGNLRKIISTGQVMGPD 120
           CWLNGQRKKAPTPEEM ELEARRERVRQNVALLKKEEMERNSKEGNLRKIISTGQV GPD
Sbjct: 61  CWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMERNSKEGNLRKIISTGQVAGPD 120

Query: 121 LKSFIRQVPTGSEGAQDVEGLPTRDSLRNSNEKEAVQEKPIPESSEPVGSGHTFKPGTWQ 180
           LKSFIRQ PTGSEGAQDVEGL TRDSLRNSNEKEAV+EKPIPESSEPVGSG TF+PGTWQ
Sbjct: 121 LKSFIRQFPTGSEGAQDVEGLTTRDSLRNSNEKEAVKEKPIPESSEPVGSGQTFRPGTWQ 180

Query: 181 PPT 184
           PPT
Sbjct: 181 PPT 183

[Close]

BLAST of CSPI03G05130 vs. NCBI nr
Match: XP_038903173.1 (uncharacterized protein LOC120089839 isoform X1 [Benincasa hispida])

HSP 1 Score: 340.9 bits (873), Expect = 6.9e-90
Identity = 173/190 (91.05%), Postives = 177/190 (93.16%), Query Frame = 0


Query: 1   MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWI 60
           MSKLFGKIA FFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWV+FKGEDDPTSIPVEWI
Sbjct: 1   MSKLFGKIAGFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWI 60

Query: 61  CWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMERNSKEGNLRKIISTGQVMGPD 120
           CWLNGQRKKAPTPEEM ELEARRERVRQNVALLKKEEMERNSKEGNLRKIISTGQV GPD
Sbjct: 61  CWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMERNSKEGNLRKIISTGQVAGPD 120

Query: 121 LKSFIRQVPTGSEGAQDVEGLPTRDSLRNSNEKEAVQEKPIPE-------SSEPVGSGHT 180
           LKSFIRQ PTGSEGAQDVEGL TRDSLRNSNEKEAV+EKPIP+       SSEPVGSG T
Sbjct: 121 LKSFIRQFPTGSEGAQDVEGLTTRDSLRNSNEKEAVKEKPIPDSHSFTFRSSEPVGSGQT 180

Query: 181 FKPGTWQPPT 184
           F+PGTWQPPT
Sbjct: 181 FRPGTWQPPT 190

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BLAST of CSPI03G05130 vs. NCBI nr
Match: XP_031738721.1 (uncharacterized protein LOC101214441 isoform X1 [Cucumis sativus])

HSP 1 Score: 322.0 bits (824), Expect = 3.3e-84
Identity = 163/166 (98.19%), Postives = 163/166 (98.19%), Query Frame = 0


Query: 1   MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWI 60
           MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWI
Sbjct: 1   MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWI 60

Query: 61  CWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMERNSKEGNLRKIISTGQVMGPD 120
           CWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMERNSKEGNLRKIISTGQVMGPD
Sbjct: 61  CWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMERNSKEGNLRKIISTGQVMGPD 120

Query: 121 LKSFIRQVPTGSEGAQDVEGLPTRDSLRNSNEKEAVQEKPIPESSE 167
           LKSFIRQVPTGSEGAQDVEGLPTRDSLRNSNEKEA QEKPIPE  E
Sbjct: 121 LKSFIRQVPTGSEGAQDVEGLPTRDSLRNSNEKEADQEKPIPEKKE 166

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BLAST of CSPI03G05130 vs. TAIR 10
Match: AT4G26965.1 (NADH:ubiquinone oxidoreductase, 17.2kDa subunit )

HSP 1 Score: 212.6 bits (540), Expect = 2.6e-55
Identity = 110/185 (59.46%), Postives = 138/185 (74.59%), Query Frame = 0


Query: 1   MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWI 60
           MS+L+ + A  FS+++ +GVDK GN+YF   EEIDG +KEKRWV F+ E+DPTSIPVEWI
Sbjct: 1   MSRLWARFAGLFSSKSFIGVDKTGNKYFSRMEEIDGFVKEKRWVKFRREEDPTSIPVEWI 60

Query: 61  CWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMERNSKEGNLRKIISTGQVMGPD 120
           CWLNGQRK+APTPEEM ELEARRERV+ NVALLKKEE E+ ++ G  RK I+ G+V GPD
Sbjct: 61  CWLNGQRKRAPTPEEMIELEARRERVKLNVALLKKEEEEKKARVGTGRK-ITIGKVDGPD 120

Query: 121 LKSFIRQVPTGSEGAQDVEGLPTRDSLR-NSNEKEAVQ-EKPIPESSEPVGSGHTFKPGT 180
           L SF+RQ P  S+G +  E     D  R   +E E V  E P P+++EP GSG +F+PGT
Sbjct: 121 LTSFVRQFPPDSKGGEPEEASEEADKSRAKEHEPEIVSAEPPEPKTTEPSGSGSSFRPGT 180

Query: 181 WQPPT 184
           WQPP+
Sbjct: 181 WQPPS 184

[Close]

BLAST of CSPI03G05130 vs. TAIR 10
Match: AT4G26965.2 (NADH:ubiquinone oxidoreductase, 17.2kDa subunit )

HSP 1 Score: 172.9 bits (437), Expect = 2.3e-43
Identity = 92/148 (62.16%), Postives = 111/148 (75.00%), Query Frame = 0


Query: 38  MKEKRWVLFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEE 97
           MKEKRWV F+ E+DPTSIPVEWICWLNGQRK+APTPEEM ELEARRERV+ NVALLKKEE
Sbjct: 1   MKEKRWVKFRREEDPTSIPVEWICWLNGQRKRAPTPEEMIELEARRERVKLNVALLKKEE 60

Query: 98  MERNSKEGNLRKIISTGQVMGPDLKSFIRQVPTGSEGAQDVEGLPTRDSLR-NSNEKEAV 157
            E+ ++ G  RK I+ G+V GPDL SF+RQ P  S+G +  E     D  R   +E E V
Sbjct: 61  EEKKARVGTGRK-ITIGKVDGPDLTSFVRQFPPDSKGGEPEEASEEADKSRAKEHEPEIV 120

Query: 158 Q-EKPIPESSEPVGSGHTFKPGTWQPPT 184
             E P P+++EP GSG +F+PGTWQPP+
Sbjct: 121 SAEPPEPKTTEPSGSGSSFRPGTWQPPS 147

The following BLAST results are available for this feature:

BLAST of CSPI03G05130 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q54MV7	9.3e-05	44.07	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Dictyostelium d...	[more]

BLAST of CSPI03G05130 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L526	2.8e-97	99.45	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Cucumis sativus...	[more]
A0A5A7SS01	1.3e-94	96.17	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Cucumis melo va...	[more]
A0A6J1DNE9	2.0e-82	84.15	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Momordica chara...	[more]
A0A6J1JVV8	4.8e-81	84.70	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Cucurbita maxim...	[more]
A0A6J1JSL7	2.4e-80	84.15	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Cucurbita maxim...	[more]

BLAST of CSPI03G05130 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004152928.1	5.8e-97	99.45	uncharacterized protein LOC101214441 isoform X2 [Cucumis sativus] >KGN56129.1 hy...	[more]
KAA0033972.1	2.7e-94	96.17	NDUFA12 domain-containing protein [Cucumis melo var. makuwa]	[more]
XP_038903174.1	2.5e-92	95.08	uncharacterized protein LOC120089839 isoform X2 [Benincasa hispida]	[more]
XP_038903173.1	6.9e-90	91.05	uncharacterized protein LOC120089839 isoform X1 [Benincasa hispida]	[more]
XP_031738721.1	3.3e-84	98.19	uncharacterized protein LOC101214441 isoform X1 [Cucumis sativus]	[more]

BLAST of CSPI03G05130 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G26965.1	2.6e-55	59.46	NADH:ubiquinone oxidoreductase, 17.2kDa subunit	[more]
AT4G26965.2	2.3e-43	62.16	NADH:ubiquinone oxidoreductase, 17.2kDa subunit	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 76..96
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 129..183
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 146..160
None	No IPR available	PANTHER	PTHR12910:SF1	NADH DEHYDROGENASE [UBIQUINONE] 1 ALPHA SUBCOMPLEX SUBUNIT 12	coord: 1..183
IPR007763	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12	PFAM	PF05071	NDUFA12	coord: 16..94 e-value: 3.3E-12 score: 47.2
IPR007763	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12	PANTHER	PTHR12910	NADH-UBIQUINONE OXIDOREDUCTASE SUBUNIT B17.2	coord: 1..183

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G05130.2	CSPI03G05130.2	mRNA
CSPI03G05130.1	CSPI03G05130.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032981	mitochondrial respiratory chain complex I assembly
cellular_component	GO:0005743	mitochondrial inner membrane
cellular_component	GO:0070469	respirasome
cellular_component	GO:0016020	membrane