CSPI03G04370 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI03G04370
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionRNA polymerase II elongation factor
LocationChr3: 3561983 .. 3563330 (-)
RNA-Seq ExpressionCSPI03G04370
SyntenyCSPI03G04370
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTCAAAACTCAACAAAATTCCAATTCCAAACTCAAAATCATCGAAGTTCAAATCTCCAATGGCCGAAACCAAAGATTCCACTGCTGCCCACATAGTTGAAATCCCAGTAGAACAAGAAAACCACACTCAAAACCTCATGATCTCTGTAATTCAACACCACCCATTGCGACAAATTTCTGAAAGCTCCGGCCATTTATTACTCTTAAAGCTTTGGCAAAGAGATGAGCATCTCTTCGGTCTCAGAATCGGACGTCGAGAGACAAAAATGGAGTCATTAAAGCAACAAATCTTTCAACTATGTTGCTTCTTCTTCCTCTTCCATGCCCTCTCTCTCACTCTCTTGTACACTTCCTCTGATCCCATTGTGTGTAAGAAATGGTGGGTTCCGGCAGTGTTGATAGGGGCGACGTCTGGGGTGTTCGTGATCGTGGTGCAGCTGAAATTGTGGATGTATTGGAAAGCAAGAGGGCAGTTACAGAAGGAGAAGACTGAAAACAGAGCACTTACAAGATGTGTTCAAGAACTTAGAATGAAAGGATCTTGCTTTAATTTGTCTAAAGAACCACAAATTGGGAATAGAATGAAGAGTTCTAGTGTGGAGATTAAATGGGGGCCTCTCACTTGGTTTTCAAGGAATTTCATTACCATTTCTCTTCTTGGCTTTTCTGCCATGATTTTTGTTACTTCCAAGTTCATTCTTTGCGGCTTTTAATTGCCATTCGTCAGGTAAAACCTCCTTATAATGTGATTCTTTTTTCGGTAAATTACAATAAACAACACGAAAGTATGGTAGGAGTTGCCAATTTCTACAAATATTATATGTTCGAAGTTTTAACATCAATTGAGTCAACTTTTATCATTGAAAGTTCCAAGGGGTGTAAGTTGTTACAATTTGCTCTTATTTTTTTTAGGTTTGTTGGTGGCAGCTTAGTTGAATAATTCTTCTTGGATTTTTTTCTCACTATGACAAATGTCAAAATGGGTTGATATTTTGGTTTCTAACAATTTGGGTTTTGATGTAAATAAAGCAGCAGGTGCTTGAAGAATTAAATATGCAATGGAGGATGAAGCAAGATGGGTCCGACATAAAAAATATCATTAGAGGGAAGCAAGGGAGGCTCCATTTTTGTAGAATCTTTACAAATTATGAAGAGAAGGATAGTGAGGAAAGTGTTGGCTTTTGAAGTGAACTAAAAATCAGTGTTAATTAAGGCAACACTGCTTGTGTGACAACTTTTTGTTTTGGCTTTCTAAGCCTAATTAATGACTTGTCAATTTTGAAATTGGCCATATGTAACTTTTTGGCTATTTATTATTTATTATTGATATATACATCCAATTCATTAT

mRNA sequence

CTTCAAAACTCAACAAAATTCCAATTCCAAACTCAAAATCATCGAAGTTCAAATCTCCAATGGCCGAAACCAAAGATTCCACTGCTGCCCACATAGTTGAAATCCCAGTAGAACAAGAAAACCACACTCAAAACCTCATGATCTCTGTAATTCAACACCACCCATTGCGACAAATTTCTGAAAGCTCCGGCCATTTATTACTCTTAAAGCTTTGGCAAAGAGATGAGCATCTCTTCGGTCTCAGAATCGGACGTCGAGAGACAAAAATGGAGTCATTAAAGCAACAAATCTTTCAACTATGTTGCTTCTTCTTCCTCTTCCATGCCCTCTCTCTCACTCTCTTGTACACTTCCTCTGATCCCATTGTGTGTAAGAAATGGTGGGTTCCGGCAGTGTTGATAGGGGCGACGTCTGGGGTGTTCGTGATCGTGGTGCAGCTGAAATTGTGGATGTATTGGAAAGCAAGAGGGCAGTTACAGAAGGAGAAGACTGAAAACAGAGCACTTACAAGATGTGTTCAAGAACTTAGAATGAAAGGATCTTGCTTTAATTTGTCTAAAGAACCACAAATTGGGAATAGAATGAAGAGTTCTAGTGTGGAGATTAAATGGGGGCCTCTCACTTGGTTTTCAAGGAATTTCATTACCATTTCTCTTCTTGGCTTTTCTGCCATGATTTTTGTTACTTCCAAGTTCATTCTTTGCGGCTTTTAATTGCCATTCGTCAGCAGGTGCTTGAAGAATTAAATATGCAATGGAGGATGAAGCAAGATGGGTCCGACATAAAAAATATCATTAGAGGGAAGCAAGGGAGGCTCCATTTTTGTAGAATCTTTACAAATTATGAAGAGAAGGATAGTGAGGAAAGTGTTGGCTTTTGAAGTGAACTAAAAATCAGTGTTAATTAAGGCAACACTGCTTGTGTGACAACTTTTTGTTTTGGCTTTCTAAGCCTAATTAATGACTTGTCAATTTTGAAATTGGCCATATGTAACTTTTTGGCTATTTATTATTTATTATTGATATATACATCCAATTCATTAT

Coding sequence (CDS)

ATGGCCGAAACCAAAGATTCCACTGCTGCCCACATAGTTGAAATCCCAGTAGAACAAGAAAACCACACTCAAAACCTCATGATCTCTGTAATTCAACACCACCCATTGCGACAAATTTCTGAAAGCTCCGGCCATTTATTACTCTTAAAGCTTTGGCAAAGAGATGAGCATCTCTTCGGTCTCAGAATCGGACGTCGAGAGACAAAAATGGAGTCATTAAAGCAACAAATCTTTCAACTATGTTGCTTCTTCTTCCTCTTCCATGCCCTCTCTCTCACTCTCTTGTACACTTCCTCTGATCCCATTGTGTGTAAGAAATGGTGGGTTCCGGCAGTGTTGATAGGGGCGACGTCTGGGGTGTTCGTGATCGTGGTGCAGCTGAAATTGTGGATGTATTGGAAAGCAAGAGGGCAGTTACAGAAGGAGAAGACTGAAAACAGAGCACTTACAAGATGTGTTCAAGAACTTAGAATGAAAGGATCTTGCTTTAATTTGTCTAAAGAACCACAAATTGGGAATAGAATGAAGAGTTCTAGTGTGGAGATTAAATGGGGGCCTCTCACTTGGTTTTCAAGGAATTTCATTACCATTTCTCTTCTTGGCTTTTCTGCCATGATTTTTGTTACTTCCAAGTTCATTCTTTGCGGCTTTTAA

Protein sequence

MAETKDSTAAHIVEIPVEQENHTQNLMISVIQHHPLRQISESSGHLLLLKLWQRDEHLFGLRIGRRETKMESLKQQIFQLCCFFFLFHALSLTLLYTSSDPIVCKKWWVPAVLIGATSGVFVIVVQLKLWMYWKARGQLQKEKTENRALTRCVQELRMKGSCFNLSKEPQIGNRMKSSSVEIKWGPLTWFSRNFITISLLGFSAMIFVTSKFILCGF*
Homology
BLAST of CSPI03G04370 vs. ExPASy TrEMBL
Match: A0A0A0L2U7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G061020 PE=4 SV=1)

HSP 1 Score: 432.6 bits (1111), Expect = 1.0e-117
Identity = 215/217 (99.08%), Postives = 217/217 (100.00%), Query Frame = 0

Query: 1   MAETKDSTAAHIVEIPVEQENHTQNLMISVIQHHPLRQISESSGHLLLLKLWQRDEHLFG 60
           MAETKDSTAAHIVEIPVEQENHTQNLMISVIQHHPLRQISESSGHLLLLKLWQRDEHLFG
Sbjct: 1   MAETKDSTAAHIVEIPVEQENHTQNLMISVIQHHPLRQISESSGHLLLLKLWQRDEHLFG 60

Query: 61  LRIGRRETKMESLKQQIFQLCCFFFLFHALSLTLLYTSSDPIVCKKWWVPAVLIGATSGV 120
           LRIGRRETKMESLKQQIFQLCCFFFLFHALSLTLLYTSSDPIVCKKWWVPAV+IGATSGV
Sbjct: 61  LRIGRRETKMESLKQQIFQLCCFFFLFHALSLTLLYTSSDPIVCKKWWVPAVVIGATSGV 120

Query: 121 FVIVVQLKLWMYWKARGQLQKEKTENRALTRCVQELRMKGSCFNLSKEPQIGNRMKSSSV 180
           FVIVVQLKLWMYWKARGQLQKEKTENRALTRCVQELRMKGSCFNLSKEPQIGNRMKSSSV
Sbjct: 121 FVIVVQLKLWMYWKARGQLQKEKTENRALTRCVQELRMKGSCFNLSKEPQIGNRMKSSSV 180

Query: 181 EIKWGPLTWFSRNFITISLLGFSAMIFVTSKFILCGF 218
           EIKWGPLTWFSRNFITISLLGFSA+IFVTSKFILCGF
Sbjct: 181 EIKWGPLTWFSRNFITISLLGFSAIIFVTSKFILCGF 217

BLAST of CSPI03G04370 vs. ExPASy TrEMBL
Match: A0A1S3BL81 (uncharacterized protein LOC103491049 OS=Cucumis melo OX=3656 GN=LOC103491049 PE=4 SV=1)

HSP 1 Score: 421.4 bits (1082), Expect = 2.3e-114
Identity = 207/217 (95.39%), Postives = 213/217 (98.16%), Query Frame = 0

Query: 1   MAETKDSTAAHIVEIPVEQENHTQNLMISVIQHHPLRQISESSGHLLLLKLWQRDEHLFG 60
           MA+TKDSTAAHIVEIPVEQENHTQNLMISVIQHHPLRQISESSGHLLLLKLWQRDEHLFG
Sbjct: 1   MAQTKDSTAAHIVEIPVEQENHTQNLMISVIQHHPLRQISESSGHLLLLKLWQRDEHLFG 60

Query: 61  LRIGRRETKMESLKQQIFQLCCFFFLFHALSLTLLYTSSDPIVCKKWWVPAVLIGATSGV 120
           LRIGRRETKMESLKQQIFQLCCFFFLFHALSLTLLYTSSDPIVCKKWWVPAV+IGATSGV
Sbjct: 61  LRIGRRETKMESLKQQIFQLCCFFFLFHALSLTLLYTSSDPIVCKKWWVPAVVIGATSGV 120

Query: 121 FVIVVQLKLWMYWKARGQLQKEKTENRALTRCVQELRMKGSCFNLSKEPQIGNRMKSSSV 180
           FVIVVQLKLWMYWKARGQLQ+EK+ENRALTRC QELRMKGSCFNLSKEPQIGNRMKSSSV
Sbjct: 121 FVIVVQLKLWMYWKARGQLQREKSENRALTRCAQELRMKGSCFNLSKEPQIGNRMKSSSV 180

Query: 181 EIKWGPLTWFSRNFITISLLGFSAMIFVTSKFILCGF 218
           EIKWGPLTWFSRNFI ISLLGFSA++F  SKFILCGF
Sbjct: 181 EIKWGPLTWFSRNFIAISLLGFSAIVFAASKFILCGF 217

BLAST of CSPI03G04370 vs. ExPASy TrEMBL
Match: A0A6J1HN07 (uncharacterized protein LOC111465114 OS=Cucurbita maxima OX=3661 GN=LOC111465114 PE=4 SV=1)

HSP 1 Score: 353.6 bits (906), Expect = 5.9e-94
Identity = 179/215 (83.26%), Postives = 193/215 (89.77%), Query Frame = 0

Query: 3   ETKDSTAA-HIVEIPVEQENHTQNLMISVIQHHPLRQISESSGHLLLLKLWQRDEHLFGL 62
           ETKDS AA HIVEIP E     QN+MISVI+ HPLRQISESSGHLLLLKLWQR+EHLFGL
Sbjct: 4   ETKDSGAATHIVEIPAE----NQNIMISVIEQHPLRQISESSGHLLLLKLWQREEHLFGL 63

Query: 63  RIGRRETKMESLKQQIFQLCCFFFLFHALSLTLLYTSSDPIVCKKWWVPAVLIGATSGVF 122
           RIGRRETK+ESLKQQIFQLCC+FFLFHALSLTLL+TSSDP VC KWWVP V +GATSGVF
Sbjct: 64  RIGRRETKLESLKQQIFQLCCYFFLFHALSLTLLFTSSDPNVCHKWWVPGVAMGATSGVF 123

Query: 123 VIVVQLKLWMYWKARGQLQKEKTENRALTRCVQELRMKGSCFNLSKEPQIGNRMKSSSVE 182
           VIVVQLKLW+YWKA  QLQ+EK+ENRALTR VQELRMKGSCFNLSKEPQIG+RMKSSSVE
Sbjct: 124 VIVVQLKLWLYWKASAQLQREKSENRALTRIVQELRMKGSCFNLSKEPQIGHRMKSSSVE 183

Query: 183 IKWGPLTWFSRNFITISLLGFSAMIFVTSKFILCG 217
           IKWGPLTW SRNF+TI LL FS ++F  SKFILCG
Sbjct: 184 IKWGPLTWLSRNFVTIFLLCFSGIVFGASKFILCG 214

BLAST of CSPI03G04370 vs. ExPASy TrEMBL
Match: A0A6J1EWB5 (uncharacterized protein LOC111438709 OS=Cucurbita moschata OX=3662 GN=LOC111438709 PE=4 SV=1)

HSP 1 Score: 352.4 bits (903), Expect = 1.3e-93
Identity = 178/215 (82.79%), Postives = 193/215 (89.77%), Query Frame = 0

Query: 3   ETKDS-TAAHIVEIPVEQENHTQNLMISVIQHHPLRQISESSGHLLLLKLWQRDEHLFGL 62
           ETKDS  AAH+VEIP E     QN+MISVI+ HPLRQISESSGHLLLLKLWQR+EHLFGL
Sbjct: 4   ETKDSGAAAHVVEIPAE----NQNVMISVIEQHPLRQISESSGHLLLLKLWQREEHLFGL 63

Query: 63  RIGRRETKMESLKQQIFQLCCFFFLFHALSLTLLYTSSDPIVCKKWWVPAVLIGATSGVF 122
           RIGRRETK+ESLKQQIFQLCC+FFLFHALSLTLL+TSSDP VC KWWVP V +GATSGVF
Sbjct: 64  RIGRRETKLESLKQQIFQLCCYFFLFHALSLTLLFTSSDPNVCHKWWVPGVAMGATSGVF 123

Query: 123 VIVVQLKLWMYWKARGQLQKEKTENRALTRCVQELRMKGSCFNLSKEPQIGNRMKSSSVE 182
           VIVVQLKLW+YWKA  QLQ+EK+ENRALTRCVQELRMKGSCFNLSKEPQIG+RMKSSSVE
Sbjct: 124 VIVVQLKLWLYWKASAQLQREKSENRALTRCVQELRMKGSCFNLSKEPQIGHRMKSSSVE 183

Query: 183 IKWGPLTWFSRNFITISLLGFSAMIFVTSKFILCG 217
           IKWGPLT  SRNF+TI LL FS ++F  SKFILCG
Sbjct: 184 IKWGPLTLLSRNFVTIVLLCFSGIVFGASKFILCG 214

BLAST of CSPI03G04370 vs. ExPASy TrEMBL
Match: A0A5A7VJ68 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G001520 PE=4 SV=1)

HSP 1 Score: 289.7 bits (740), Expect = 1.0e-74
Identity = 140/148 (94.59%), Postives = 145/148 (97.97%), Query Frame = 0

Query: 70  MESLKQQIFQLCCFFFLFHALSLTLLYTSSDPIVCKKWWVPAVLIGATSGVFVIVVQLKL 129
           MESLKQQIFQLCCFFFLFHALSLTLLYTSSDPIVCKKWWVPAV+IGATSGVFVIVVQLKL
Sbjct: 1   MESLKQQIFQLCCFFFLFHALSLTLLYTSSDPIVCKKWWVPAVVIGATSGVFVIVVQLKL 60

Query: 130 WMYWKARGQLQKEKTENRALTRCVQELRMKGSCFNLSKEPQIGNRMKSSSVEIKWGPLTW 189
           WMYWKARGQLQ+EK+ENRALTRCVQELRMKGSCFNLSKEPQIGNRMKSSSVEIKWGPLTW
Sbjct: 61  WMYWKARGQLQREKSENRALTRCVQELRMKGSCFNLSKEPQIGNRMKSSSVEIKWGPLTW 120

Query: 190 FSRNFITISLLGFSAMIFVTSKFILCGF 218
           FSRNFI ISLLGFSA++F  SKFILCGF
Sbjct: 121 FSRNFIAISLLGFSAIVFAASKFILCGF 148

BLAST of CSPI03G04370 vs. NCBI nr
Match: XP_004149573.1 (uncharacterized protein LOC101219596 [Cucumis sativus] >XP_011650492.1 uncharacterized protein LOC101219596 [Cucumis sativus] >KGN56048.1 hypothetical protein Csa_010603 [Cucumis sativus])

HSP 1 Score: 432.6 bits (1111), Expect = 2.1e-117
Identity = 215/217 (99.08%), Postives = 217/217 (100.00%), Query Frame = 0

Query: 1   MAETKDSTAAHIVEIPVEQENHTQNLMISVIQHHPLRQISESSGHLLLLKLWQRDEHLFG 60
           MAETKDSTAAHIVEIPVEQENHTQNLMISVIQHHPLRQISESSGHLLLLKLWQRDEHLFG
Sbjct: 1   MAETKDSTAAHIVEIPVEQENHTQNLMISVIQHHPLRQISESSGHLLLLKLWQRDEHLFG 60

Query: 61  LRIGRRETKMESLKQQIFQLCCFFFLFHALSLTLLYTSSDPIVCKKWWVPAVLIGATSGV 120
           LRIGRRETKMESLKQQIFQLCCFFFLFHALSLTLLYTSSDPIVCKKWWVPAV+IGATSGV
Sbjct: 61  LRIGRRETKMESLKQQIFQLCCFFFLFHALSLTLLYTSSDPIVCKKWWVPAVVIGATSGV 120

Query: 121 FVIVVQLKLWMYWKARGQLQKEKTENRALTRCVQELRMKGSCFNLSKEPQIGNRMKSSSV 180
           FVIVVQLKLWMYWKARGQLQKEKTENRALTRCVQELRMKGSCFNLSKEPQIGNRMKSSSV
Sbjct: 121 FVIVVQLKLWMYWKARGQLQKEKTENRALTRCVQELRMKGSCFNLSKEPQIGNRMKSSSV 180

Query: 181 EIKWGPLTWFSRNFITISLLGFSAMIFVTSKFILCGF 218
           EIKWGPLTWFSRNFITISLLGFSA+IFVTSKFILCGF
Sbjct: 181 EIKWGPLTWFSRNFITISLLGFSAIIFVTSKFILCGF 217

BLAST of CSPI03G04370 vs. NCBI nr
Match: XP_008449068.1 (PREDICTED: uncharacterized protein LOC103491049 [Cucumis melo] >XP_008449069.1 PREDICTED: uncharacterized protein LOC103491049 [Cucumis melo])

HSP 1 Score: 421.4 bits (1082), Expect = 4.8e-114
Identity = 207/217 (95.39%), Postives = 213/217 (98.16%), Query Frame = 0

Query: 1   MAETKDSTAAHIVEIPVEQENHTQNLMISVIQHHPLRQISESSGHLLLLKLWQRDEHLFG 60
           MA+TKDSTAAHIVEIPVEQENHTQNLMISVIQHHPLRQISESSGHLLLLKLWQRDEHLFG
Sbjct: 1   MAQTKDSTAAHIVEIPVEQENHTQNLMISVIQHHPLRQISESSGHLLLLKLWQRDEHLFG 60

Query: 61  LRIGRRETKMESLKQQIFQLCCFFFLFHALSLTLLYTSSDPIVCKKWWVPAVLIGATSGV 120
           LRIGRRETKMESLKQQIFQLCCFFFLFHALSLTLLYTSSDPIVCKKWWVPAV+IGATSGV
Sbjct: 61  LRIGRRETKMESLKQQIFQLCCFFFLFHALSLTLLYTSSDPIVCKKWWVPAVVIGATSGV 120

Query: 121 FVIVVQLKLWMYWKARGQLQKEKTENRALTRCVQELRMKGSCFNLSKEPQIGNRMKSSSV 180
           FVIVVQLKLWMYWKARGQLQ+EK+ENRALTRC QELRMKGSCFNLSKEPQIGNRMKSSSV
Sbjct: 121 FVIVVQLKLWMYWKARGQLQREKSENRALTRCAQELRMKGSCFNLSKEPQIGNRMKSSSV 180

Query: 181 EIKWGPLTWFSRNFITISLLGFSAMIFVTSKFILCGF 218
           EIKWGPLTWFSRNFI ISLLGFSA++F  SKFILCGF
Sbjct: 181 EIKWGPLTWFSRNFIAISLLGFSAIVFAASKFILCGF 217

BLAST of CSPI03G04370 vs. NCBI nr
Match: XP_038905570.1 (uncharacterized protein LOC120091553 [Benincasa hispida] >XP_038905571.1 uncharacterized protein LOC120091553 [Benincasa hispida])

HSP 1 Score: 399.4 bits (1025), Expect = 1.9e-107
Identity = 202/219 (92.24%), Postives = 207/219 (94.52%), Query Frame = 0

Query: 1   MAETKDSTAAHIVEIPVEQENHTQNL--MISVIQHHPLRQISESSGHLLLLKLWQRDEHL 60
           MAETKDS  AHIVEIPVEQENHTQN   MISVIQHHPLRQISESSGHLLLLKLWQRDEHL
Sbjct: 1   MAETKDS-GAHIVEIPVEQENHTQNQNPMISVIQHHPLRQISESSGHLLLLKLWQRDEHL 60

Query: 61  FGLRIGRRETKMESLKQQIFQLCCFFFLFHALSLTLLYTSSDPIVCKKWWVPAVLIGATS 120
           FGLRIGRRETKMESLKQQIFQLCCFFFLFHALSLTLLYTSSDP VCKKWWVPAV +GATS
Sbjct: 61  FGLRIGRRETKMESLKQQIFQLCCFFFLFHALSLTLLYTSSDPNVCKKWWVPAVAMGATS 120

Query: 121 GVFVIVVQLKLWMYWKARGQLQKEKTENRALTRCVQELRMKGSCFNLSKEPQIGNRMKSS 180
           GVFVIVVQLKLW+YWKA GQLQ+EKTENRALTRCVQELRMKGSCFNLSKEPQIGNRMKSS
Sbjct: 121 GVFVIVVQLKLWLYWKASGQLQREKTENRALTRCVQELRMKGSCFNLSKEPQIGNRMKSS 180

Query: 181 SVEIKWGPLTWFSRNFITISLLGFSAMIFVTSKFILCGF 218
           SVEIKWGPLTWFSRNFITI LLGFSA++F  SKFILC F
Sbjct: 181 SVEIKWGPLTWFSRNFITIFLLGFSAIVFAASKFILCAF 218

BLAST of CSPI03G04370 vs. NCBI nr
Match: XP_023553388.1 (uncharacterized protein LOC111810817 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 360.9 bits (925), Expect = 7.6e-96
Identity = 178/214 (83.18%), Postives = 194/214 (90.65%), Query Frame = 0

Query: 3   ETKDSTAAHIVEIPVEQENHTQNLMISVIQHHPLRQISESSGHLLLLKLWQRDEHLFGLR 62
           ET+DS AAH+VEIP E     QN+MISVI+ HPLRQISESSGHLLLLKLWQR+EHLFGLR
Sbjct: 4   ETRDSGAAHVVEIPAE----NQNVMISVIEQHPLRQISESSGHLLLLKLWQREEHLFGLR 63

Query: 63  IGRRETKMESLKQQIFQLCCFFFLFHALSLTLLYTSSDPIVCKKWWVPAVLIGATSGVFV 122
           +GRRETKMESLKQQIFQLCC+FFLFHALSLTLL+TSSDP VC KWWVP V +GATSGVFV
Sbjct: 64  VGRRETKMESLKQQIFQLCCYFFLFHALSLTLLFTSSDPNVCHKWWVPGVAMGATSGVFV 123

Query: 123 IVVQLKLWMYWKARGQLQKEKTENRALTRCVQELRMKGSCFNLSKEPQIGNRMKSSSVEI 182
           IVVQLKLW+YWKA  QLQ+EK+ENRALTRCVQELRMKGSCFNLSKEPQIG+RMKSSSVEI
Sbjct: 124 IVVQLKLWLYWKASAQLQREKSENRALTRCVQELRMKGSCFNLSKEPQIGHRMKSSSVEI 183

Query: 183 KWGPLTWFSRNFITISLLGFSAMIFVTSKFILCG 217
           KWGPLTW SRNF+TI LL FS ++F  SKFILCG
Sbjct: 184 KWGPLTWLSRNFVTIVLLCFSGIVFGASKFILCG 213

BLAST of CSPI03G04370 vs. NCBI nr
Match: KAG7015562.1 (hypothetical protein SDJN02_23198, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 357.5 bits (916), Expect = 8.4e-95
Identity = 179/215 (83.26%), Postives = 194/215 (90.23%), Query Frame = 0

Query: 3   ETKDS-TAAHIVEIPVEQENHTQNLMISVIQHHPLRQISESSGHLLLLKLWQRDEHLFGL 62
           ETKDS  AAH+VEIP E     QN+MISVI+ HPLRQISESSGHLLLLKLWQR+EHLFGL
Sbjct: 4   ETKDSGAAAHVVEIPAE----NQNVMISVIEQHPLRQISESSGHLLLLKLWQREEHLFGL 63

Query: 63  RIGRRETKMESLKQQIFQLCCFFFLFHALSLTLLYTSSDPIVCKKWWVPAVLIGATSGVF 122
           RIGRRETK+ESLKQQIFQLCC+FFLFHALSLTLL+TSSDP VC KWWVP V +GATSGVF
Sbjct: 64  RIGRRETKLESLKQQIFQLCCYFFLFHALSLTLLFTSSDPNVCHKWWVPGVAMGATSGVF 123

Query: 123 VIVVQLKLWMYWKARGQLQKEKTENRALTRCVQELRMKGSCFNLSKEPQIGNRMKSSSVE 182
           VIVVQLKLW+YWKA  QLQ+EK+ENRALTRCVQELRMKGSCFNLSKEPQIG+RMKSSSVE
Sbjct: 124 VIVVQLKLWLYWKASAQLQREKSENRALTRCVQELRMKGSCFNLSKEPQIGHRMKSSSVE 183

Query: 183 IKWGPLTWFSRNFITISLLGFSAMIFVTSKFILCG 217
           IKWGPLTW SRNF+TI LL FS ++F  SKFILCG
Sbjct: 184 IKWGPLTWLSRNFVTIFLLCFSGIVFGASKFILCG 214

BLAST of CSPI03G04370 vs. TAIR 10
Match: AT5G56120.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G12870.1); Has 77 Blast hits to 75 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 77; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 236.5 bits (602), Expect = 2.0e-62
Identity = 129/239 (53.97%), Postives = 164/239 (68.62%), Query Frame = 0

Query: 1   MAETKDSTAAHIVEIPVEQEN----HTQNL---------MISVIQHHPLRQISESSGHLL 60
           MA TKDS   H+VEIPV++E+      Q L         ++ VIQ HPL +ISES GHLL
Sbjct: 1   MAGTKDS---HVVEIPVDEEHKERQQQQQLVAVSNPGMGILKVIQQHPLSEISESPGHLL 60

Query: 61  LLKLWQRDEHLFGLRIGRRETKMESLKQQIFQLCCFFFLFHALSLTLLYTSS-------- 120
           LLKLWQR+E LF  R+  +E+++ES+K++IFQLCCFF +FH    TL+Y+SS        
Sbjct: 61  LLKLWQREEDLFCRRVLLKESRLESIKREIFQLCCFFLVFHGFFFTLVYSSSCSDDADVV 120

Query: 121 -DPIVCKKWWVPAVLIGATSGVFVIVVQLKLWMYWKARGQLQKEKTENRALTRCVQELRM 180
               VCKKWW+P+ +  ATS V V +VQ KL+++WK    + +E+ +NR LTRCV ELRM
Sbjct: 121 KSNAVCKKWWIPSAVSLATSLVLVFLVQAKLFVFWKVYRGVNRERNDNRTLTRCVLELRM 180

Query: 181 KGSCFNLSKEPQIGNRMKSSSVEIKWGPLTWFSRNFITISLLGFSAMIFVTSKFILCGF 218
           KGS F+LSKEP  G RMKSSSVEIKW P+TWFS+  ITI LL  + + F  SKFILCGF
Sbjct: 181 KGSSFDLSKEPMSGKRMKSSSVEIKWKPVTWFSQYLITIVLLCSAGLFFPVSKFILCGF 236

BLAST of CSPI03G04370 vs. TAIR 10
Match: AT3G12870.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G56120.1); Has 70 Blast hits to 70 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 70; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 110.9 bits (276), Expect = 1.3e-24
Identity = 66/190 (34.74%), Postives = 110/190 (57.89%), Query Frame = 0

Query: 34  HPLRQISESSGHLLLLKLWQRDEHLFGLRIGRRETKMESLKQQIFQLCCFFFLFHALSLT 93
           HPL QI+++  H LLLK W ++E L   R+  +E++++S++++I QL  FFFLFH++SL 
Sbjct: 18  HPLHQIADTPTHKLLLKQWLKEEELILSRVSHKESQIDSVRREITQLYIFFFLFHSISLL 77

Query: 94  LLY-------TSSDPIVCKKWWVPAVLIGATSGVFVIVVQLKLWMYWKARGQLQKEKTEN 153
           LL+       +S+    CK+ W+P++    +S   +  V+ K  +       L++EK + 
Sbjct: 78  LLFHASSSSSSSASSSACKRSWIPSLCALLSSLGIIWAVRYKSEVESHLEKLLEREKEDA 137

Query: 154 RALTRCVQELRMKGSCFNLSKEPQIGNRMKSSSVEIKWGPL-TWFSRNFITISLLGFSAM 213
           + L +CV+EL+ KG  F+L KE     R KS  VE K  P+  W +R+F+T+     S +
Sbjct: 138 KLLRKCVEELKKKGIEFDLLKEVDALRRAKSLRVESK--PVKKWSARDFVTLFFFSVSCL 197

Query: 214 IFVTSKFILC 216
           +    + ILC
Sbjct: 198 VLAMIRLILC 205

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0L2U71.0e-11799.08Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G061020 PE=4 SV=1[more]
A0A1S3BL812.3e-11495.39uncharacterized protein LOC103491049 OS=Cucumis melo OX=3656 GN=LOC103491049 PE=... [more]
A0A6J1HN075.9e-9483.26uncharacterized protein LOC111465114 OS=Cucurbita maxima OX=3661 GN=LOC111465114... [more]
A0A6J1EWB51.3e-9382.79uncharacterized protein LOC111438709 OS=Cucurbita moschata OX=3662 GN=LOC1114387... [more]
A0A5A7VJ681.0e-7494.59Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
XP_004149573.12.1e-11799.08uncharacterized protein LOC101219596 [Cucumis sativus] >XP_011650492.1 uncharact... [more]
XP_008449068.14.8e-11495.39PREDICTED: uncharacterized protein LOC103491049 [Cucumis melo] >XP_008449069.1 P... [more]
XP_038905570.11.9e-10792.24uncharacterized protein LOC120091553 [Benincasa hispida] >XP_038905571.1 unchara... [more]
XP_023553388.17.6e-9683.18uncharacterized protein LOC111810817 [Cucurbita pepo subsp. pepo][more]
KAG7015562.18.4e-9583.26hypothetical protein SDJN02_23198, partial [Cucurbita argyrosperma subsp. argyro... [more]
Match NameE-valueIdentityDescription
AT5G56120.12.0e-6253.97unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT3G12870.11.3e-2434.74unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 139..159
NoneNo IPR availablePANTHERPTHR33287:SF3OS03G0453550 PROTEINcoord: 20..216
NoneNo IPR availablePANTHERPTHR33287OS03G0453550 PROTEINcoord: 20..216

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI03G04370.1CSPI03G04370.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane