
CSPI03G04040 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGCCTTCCTCCTCAAGAAAATTACAACAATCAAACGCCTTTATATATATATATATAAGCGATTCAACTACCCTTCTTCTTCATACCCAAGTCAGAAGAGAAAAAAAAACGCTTTACATCTCTCTCTTTGTCCTCTTCTTCAACTTTTTCCCTTTTTCTTGTAAATGGGGTTGAAGTGGATTCTGAATTCTGCCTTTACTCAAGTTCTGGGTCTCACAGAGAAGCAACAACAGAATCAGAAGGAGGCAGGAGGAGAAGGAATCAAGAACGTGGAGCAAGTGAAGGAGGGGCGAGATTGTTTTTATGGTGGAGGTTTGAACTTTCAAAGTGGGTTTCAAATGCCCCTTCATTATCCTAGGTATACCAAGAGGGATTATGAGGAAATGGAGGAAGGTAAGTTGGATTTGCTTCTCAAACAATATGGGCTCTGTTTTGATGGTACCCTTGAGGAGAAAAGGGCGTTTGCTATTGGGACGTTCATATGGCCTGACCAACTTTGAATTTATCCACAGTGCGTTTGATGAAATTCCTCAAAGAAAAAATGACCCAGTTTTTAAGGTGTTTGTATAGCTAGGTTATGAATGAATGTGATGTTGGTTTAAGATGCAGAAATATTAGTAGCTGTGTCTTTTTTGTTATATATTTTTTTTCTTTTTCGACAAAGCTTTTGTTTGGCTGTATATGCTGATCTTGATGTGATTCTAATGAATCTTGTAAAAAC TGCCTTCCTCCTCAAGAAAATTACAACAATCAAACGCCTTTATATATATATATATAAGCGATTCAACTACCCTTCTTCTTCATACCCAAGTCAGAAGAGAAAAAAAAACGCTTTACATCTCTCTCTTTGTCCTCTTCTTCAACTTTTTCCCTTTTTCTTGTAAATGGGGTTGAAGTGGATTCTGAATTCTGCCTTTACTCAAGTTCTGGGTCTCACAGAGAAGCAACAACAGAATCAGAAGGAGGCAGGAGGAGAAGGAATCAAGAACGTGGAGCAAGTGAAGGAGGGGCGAGATTGTTTTTATGGTGGAGGTTTGAACTTTCAAAGTGGGTTTCAAATGCCCCTTCATTATCCTAGGTATACCAAGAGGGATTATGAGGAAATGGAGGAAGGTAAGTTGGATTTGCTTCTCAAACAATATGGGCTCTGTTTTGATGGTACCCTTGAGGAGAAAAGGGCGTTTGCTATTGGGACGTTCATATGGCCTGACCAACTTTGAATTTATCCACAGTGCGTTTGATGAAATTCCTCAAAGAAAAAATGACCCAGTTTTTAAGGTGTTTGTATAGCTAGGTTATGAATGAATGTGATGTTGGTTTAAGATGCAGAAATATTAGTAGCTGTGTCTTTTTTGTTATATATTTTTTTTCTTTTTCGACAAAGCTTTTGTTTGGCTGTATATGCTGATCTTGATGTGATTCTAATGAATCTTGTAAAAAC ATGGGGTTGAAGTGGATTCTGAATTCTGCCTTTACTCAAGTTCTGGGTCTCACAGAGAAGCAACAACAGAATCAGAAGGAGGCAGGAGGAGAAGGAATCAAGAACGTGGAGCAAGTGAAGGAGGGGCGAGATTGTTTTTATGGTGGAGGTTTGAACTTTCAAAGTGGGTTTCAAATGCCCCTTCATTATCCTAGGTATACCAAGAGGGATTATGAGGAAATGGAGGAAGGTAAGTTGGATTTGCTTCTCAAACAATATGGGCTCTGTTTTGATGGTACCCTTGAGGAGAAAAGGGCGTTTGCTATTGGGACGTTCATATGGCCTGACCAACTTTGA MGLKWILNSAFTQVLGLTEKQQQNQKEAGGEGIKNVEQVKEGRDCFYGGGLNFQSGFQMPLHYPRYTKRDYEEMEEGKLDLLLKQYGLCFDGTLEEKRAFAIGTFIWPDQL* Homology
BLAST of CSPI03G04040 vs. ExPASy TrEMBL
Match: A0A5D3CPN0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold488G00090 PE=4 SV=1) HSP 1 Score: 233.8 bits (595), Expect = 3.5e-58 Identity = 109/111 (98.20%), Postives = 111/111 (100.00%), Query Frame = 0
BLAST of CSPI03G04040 vs. ExPASy TrEMBL
Match: A0A0A0L4U1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G047750 PE=4 SV=1) HSP 1 Score: 233.0 bits (593), Expect = 6.0e-58 Identity = 110/111 (99.10%), Postives = 110/111 (99.10%), Query Frame = 0
BLAST of CSPI03G04040 vs. ExPASy TrEMBL
Match: A0A1S3BM13 (uncharacterized protein LOC103491021 OS=Cucumis melo OX=3656 GN=LOC103491021 PE=4 SV=1) HSP 1 Score: 231.1 bits (588), Expect = 2.3e-57 Identity = 108/111 (97.30%), Postives = 110/111 (99.10%), Query Frame = 0
BLAST of CSPI03G04040 vs. ExPASy TrEMBL
Match: A0A6J1HJS9 (uncharacterized protein LOC111465146 OS=Cucurbita maxima OX=3661 GN=LOC111465146 PE=4 SV=1) HSP 1 Score: 201.1 bits (510), Expect = 2.5e-48 Identity = 98/111 (88.29%), Postives = 103/111 (92.79%), Query Frame = 0
BLAST of CSPI03G04040 vs. ExPASy TrEMBL
Match: A0A6J1EWJ7 (uncharacterized protein LOC111438758 OS=Cucurbita moschata OX=3662 GN=LOC111438758 PE=4 SV=1) HSP 1 Score: 199.5 bits (506), Expect = 7.3e-48 Identity = 97/111 (87.39%), Postives = 102/111 (91.89%), Query Frame = 0
BLAST of CSPI03G04040 vs. NCBI nr
Match: KAA0065725.1 (uncharacterized protein E6C27_scaffold37G00120 [Cucumis melo var. makuwa] >TYK13751.1 uncharacterized protein E5676_scaffold488G00090 [Cucumis melo var. makuwa]) HSP 1 Score: 233.8 bits (595), Expect = 7.2e-58 Identity = 109/111 (98.20%), Postives = 111/111 (100.00%), Query Frame = 0
BLAST of CSPI03G04040 vs. NCBI nr
Match: XP_011650470.1 (uncharacterized protein LOC105434788 [Cucumis sativus] >KGN56014.1 hypothetical protein Csa_011328 [Cucumis sativus]) HSP 1 Score: 233.0 bits (593), Expect = 1.2e-57 Identity = 110/111 (99.10%), Postives = 110/111 (99.10%), Query Frame = 0
BLAST of CSPI03G04040 vs. NCBI nr
Match: XP_008449025.1 (PREDICTED: uncharacterized protein LOC103491021 [Cucumis melo]) HSP 1 Score: 231.1 bits (588), Expect = 4.7e-57 Identity = 108/111 (97.30%), Postives = 110/111 (99.10%), Query Frame = 0
BLAST of CSPI03G04040 vs. NCBI nr
Match: XP_038904207.1 (uncharacterized protein LOC120090553 [Benincasa hispida]) HSP 1 Score: 207.2 bits (526), Expect = 7.3e-50 Identity = 99/111 (89.19%), Postives = 105/111 (94.59%), Query Frame = 0
BLAST of CSPI03G04040 vs. NCBI nr
Match: XP_022965232.1 (uncharacterized protein LOC111465146 [Cucurbita maxima]) HSP 1 Score: 201.1 bits (510), Expect = 5.2e-48 Identity = 98/111 (88.29%), Postives = 103/111 (92.79%), Query Frame = 0
BLAST of CSPI03G04040 vs. TAIR 10
Match: AT5G55620.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G09950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 101.7 bits (252), Expect = 4.0e-22 Identity = 52/113 (46.02%), Postives = 73/113 (64.60%), Query Frame = 0
BLAST of CSPI03G04040 vs. TAIR 10
Match: AT3G09950.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41761.1); Has 128 Blast hits to 128 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 128; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 92.4 bits (228), Expect = 2.4e-19 Identity = 43/56 (76.79%), Postives = 46/56 (82.14%), Query Frame = 0
BLAST of CSPI03G04040 vs. TAIR 10
Match: AT5G41761.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G55570.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 77.0 bits (188), Expect = 1.1e-14 Identity = 40/87 (45.98%), Postives = 50/87 (57.47%), Query Frame = 0
BLAST of CSPI03G04040 vs. TAIR 10
Match: AT3G55570.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41761.1); Has 128 Blast hits to 128 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 128; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 72.8 bits (177), Expect = 2.0e-13 Identity = 32/53 (60.38%), Postives = 38/53 (71.70%), Query Frame = 0
BLAST of CSPI03G04040 vs. TAIR 10
Match: AT3G11405.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G55570.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 64.3 bits (155), Expect = 7.1e-11 Identity = 31/59 (52.54%), Postives = 37/59 (62.71%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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