CSPI03G02640 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI03G02640
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr3: 2019445 .. 2020009 (+)
RNA-Seq ExpressionCSPI03G02640
SyntenyCSPI03G02640
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGTTCATGCCCAATGGCTCTGTTAATCTAACAGACAAGTGTGGTAGAAATGGCCTTCGATCGATTAATATTGTGAGTCTTGTAGATACAAGAGAAATTATCTAAAAACGACCGAAGCTTAATTGTGTTGTTCCTACGGCCAATTTGGATAAGGAGAACTCCGATTATTCAATACCGAAATTCGTTCCCTACAAAACTCAATTAGAGCAGGTCTATTCTTATATGGATGCAATCAGAAACGACTAGTCTTAGAGACATTCAAACAAAACAGTAAGAGATAATAGAAATCCTAACGAATATAAACAGCAAATAAATCCATCGATGAGTTCATCCAAGCTAAATACAGATATCGCACTCAAATAACAGAATAAATTCTCCGGGTTATGGGCGATTATTAGCTAGTAAACTGAAATTTACTTACCTCGATGTCGAAATCATGCTCCGATGTGATAAATCCAACGACGACTGGGGAGGCGATTACACTAGGAGAAGGCTTATTGCAACTTGCGATCGGTGTGGACGTTGGTTTGATCTGCGATTAGATGAACAATATCTTGATTAG

mRNA sequence

ATGTTGTTCATGCCCAATGGCTCTGTTAATCTAACAGACAAGTGTGGTAGAAATGGCCTTCGATCGATTAATATTGAGAACTCCGATTATTCAATACCGAAATTCGTTCCCTACAAAACTCAATTAGAGCAGATATCGCACTCAAATAACAGAATAAATTCTCCGGGTTATGGGCGATTATTAGCTAGTAAACTGAAATTTACTTACCTCGATGTCGAAATCATGCTCCGATGTGATAAATCCAACGACGACTGGGGAGGCGATTACACTAGGAGAAGGCTTATTGCAACTTGCGATCGGTGTGGACGTTGGTTTGATCTGCGATTAGATGAACAATATCTTGATTAG

Coding sequence (CDS)

ATGTTGTTCATGCCCAATGGCTCTGTTAATCTAACAGACAAGTGTGGTAGAAATGGCCTTCGATCGATTAATATTGAGAACTCCGATTATTCAATACCGAAATTCGTTCCCTACAAAACTCAATTAGAGCAGATATCGCACTCAAATAACAGAATAAATTCTCCGGGTTATGGGCGATTATTAGCTAGTAAACTGAAATTTACTTACCTCGATGTCGAAATCATGCTCCGATGTGATAAATCCAACGACGACTGGGGAGGCGATTACACTAGGAGAAGGCTTATTGCAACTTGCGATCGGTGTGGACGTTGGTTTGATCTGCGATTAGATGAACAATATCTTGATTAG

Protein sequence

MLFMPNGSVNLTDKCGRNGLRSINIENSDYSIPKFVPYKTQLEQISHSNNRINSPGYGRLLASKLKFTYLDVEIMLRCDKSNDDWGGDYTRRRLIATCDRCGRWFDLRLDEQYLD*
Homology
[Close]
BLAST of CSPI03G02640 vs. ExPASy TrEMBL
Match: A0A0A0L482 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G019990 PE=4 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 7.8e-61
Identity = 112/115 (97.39%), Postives = 113/115 (98.26%), Query Frame = 0 

Query: 1   MLFMPNGSVNLTDKCGRNGLRSINIENSDYSIPKFVPYKTQLEQISHSNNRINSPGYGRL 60
           MLFMPNGSVNLTDKCG NGLRSINIENSDYSIPKFVPYKTQLEQI HSNNRINSPGYGRL
Sbjct: 1   MLFMPNGSVNLTDKCGGNGLRSINIENSDYSIPKFVPYKTQLEQILHSNNRINSPGYGRL 60

Query: 61  LASKLKFTYLDVEIMLRCDKSNDDWGGDYTRRRLIATCDRCGRWFDLRLDEQYLD 116
           LASKLKFTYLDVEIMLRCDKSNDDWGGDYTRRRLIATCD+CGRWFDLRLDEQYLD
Sbjct: 61  LASKLKFTYLDVEIMLRCDKSNDDWGGDYTRRRLIATCDQCGRWFDLRLDEQYLD 115

[Close]
BLAST of CSPI03G02640 vs. NCBI nr
Match: KGN55859.1 (hypothetical protein Csa_011405 [Cucumis sativus])

HSP 1 Score: 242.7 bits (618), Expect = 1.6e-60
Identity = 112/115 (97.39%), Postives = 113/115 (98.26%), Query Frame = 0 

Query: 1   MLFMPNGSVNLTDKCGRNGLRSINIENSDYSIPKFVPYKTQLEQISHSNNRINSPGYGRL 60
           MLFMPNGSVNLTDKCG NGLRSINIENSDYSIPKFVPYKTQLEQI HSNNRINSPGYGRL
Sbjct: 1   MLFMPNGSVNLTDKCGGNGLRSINIENSDYSIPKFVPYKTQLEQILHSNNRINSPGYGRL 60

Query: 61  LASKLKFTYLDVEIMLRCDKSNDDWGGDYTRRRLIATCDRCGRWFDLRLDEQYLD 116
           LASKLKFTYLDVEIMLRCDKSNDDWGGDYTRRRLIATCD+CGRWFDLRLDEQYLD
Sbjct: 61  LASKLKFTYLDVEIMLRCDKSNDDWGGDYTRRRLIATCDQCGRWFDLRLDEQYLD 115

The following BLAST results are available for this feature:
BLAST of CSPI03G02640 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI03G02640 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L4827.8e-6197.39Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G019990 PE=4 SV=1[more]
BLAST of CSPI03G02640 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN55859.11.6e-6097.39hypothetical protein Csa_011405 [Cucumis sativus][more]
BLAST of CSPI03G02640 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI03G02640.1CSPI03G02640.1mRNA