CSPI03G02210 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI03G02210
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	AAI domain-containing protein
Location	Chr3: 1660272 .. 1661540 (+)
RNA-Seq Expression	CSPI03G02210
Synteny	CSPI03G02210

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCACATCACAACTCCCAAGTCAATTCCTCCCCAATAAAGAAAAGAAATTGCAAGACCCTTCCGCACGCGCACGCAGCACTATAAATAAATCAACCACGCTAAGGAGGCCAAACGCCAAAGGGCATTTGTTTGAGTGAGGACTTTTATCAAACAGATGGTGGGCATTAGAGAGGGTCGTTGGGGATTAGTAATGGTAGTGGTGGCAGTAATGGCGATGGGAGTGGGGGAAGTGATGGCGCTGACGGCTGCGGAATGTAAGACGGAGAGAGATATGGCGGTGAGGGAGTGTTTAGCAGTGGTGTTTGGGAGGAATCCGTCACCGGCGTGTTGCGAGAGAGCGAGAGTGAGCCATACAGAGTGCATTTGCGCAGCAGTTACGCCTAAGCTTATGACTTATGTTGATCCTAGTCGCGCCATTCGGCTCATTCAAAGCTGCGGCCGTAGAGTCCCTCGCCATTTCAAATGTGGAAGTAATTAACTTCTCTAAACTCTCTCTCTCTCTCTCTTTAAATTAGAATTAGAATTTTCATCATTGATTTTGGGTTACAAAAGGGATGTTGTTCATGTGTTCTTCAATCTTTGAATCACTAAGTTGGTTTTGAAAAAATGATTAATAAATGATGAAATTGTAAATTTTTACTATTAAAAACGAAATTTATTTTGAAAAAAATCTAAAAAAAATATAAGAAACAATTATCTAAATCTATCATAATACATACATAAATCCTAATTTATTGTGGAAAACTTTTGAAATAGTAAAGGTCTCAATCCCAACTTAGACCAATACTAATTGACAGGAAATAGATATAACATTTTTTTATAATTTAATATTTTAAAAAATAAATTTTATATTGGATATAAAATAAAAGGGACATTTTTTTTGTAAATATGTAAAATAATCAACTTCTTTTTCCTATTTATTTAATTTTTAATGCATGTGAAACTTAATTATCTAAATATGTGATTTTTTTTAATGAAAGACTAAATAAGTGAAATTAATGTTTGTAAATGCAGGTTTTACCACTCCATGAAATATAACATTGGGATCATCCAAGCAAACGTCAAGAGAAAAGGAAAAGAAAAAGATGAATAGAGATGAAGAATTGATTGATGTGTGATTTTTTTTTTCTTTTCACTTGTTTGTTTGTAATTAATTAATATGAATTGCTTTTAATTATGACCTTAGTTAAAATAAATAGACGGTTAAAGTTTGTTAAGCTTAATGTATTCAAGTTTTTCTTTATATAAATATATGAGTGAAGATATGAG

mRNA sequence

GCACATCACAACTCCCAAGTCAATTCCTCCCCAATAAAGAAAAGAAATTGCAAGACCCTTCCGCACGCGCACGCAGCACTATAAATAAATCAACCACGCTAAGGAGGCCAAACGCCAAAGGGCATTTGTTTGAGTGAGGACTTTTATCAAACAGATGGTGGGCATTAGAGAGGGTCGTTGGGGATTAGTAATGGTAGTGGTGGCAGTAATGGCGATGGGAGTGGGGGAAGTGATGGCGCTGACGGCTGCGGAATGTAAGACGGAGAGAGATATGGCGGTGAGGGAGTGTTTAGCAGTGGTGTTTGGGAGGAATCCGTCACCGGCGTGTTGCGAGAGAGCGAGAGTGAGCCATACAGAGTGCATTTGCGCAGCAGTTACGCCTAAGCTTATGACTTATGTTGATCCTAGTCGCGCCATTCGGCTCATTCAAAGCTGCGGCCGTAGAGTCCCTCGCCATTTCAAATGTGGAAGTTTTACCACTCCATGAAATATAACATTGGGATCATCCAAGCAAACGTCAAGAGAAAAGGAAAAGAAAAAGATGAATAGAGATGAAGAATTGATTGATGTGTGATTTTTTTTTTCTTTTCACTTGTTTGTTTGTAATTAATTAATATGAATTGCTTTTAATTATGACCTTAGTTAAAATAAATAGACGGTTAAAGTTTGTTAAGCTTAATGTATTCAAGTTTTTCTTTATATAAATATATGAGTGAAGATATGAG

Coding sequence (CDS)

ATGGTGGGCATTAGAGAGGGTCGTTGGGGATTAGTAATGGTAGTGGTGGCAGTAATGGCGATGGGAGTGGGGGAAGTGATGGCGCTGACGGCTGCGGAATGTAAGACGGAGAGAGATATGGCGGTGAGGGAGTGTTTAGCAGTGGTGTTTGGGAGGAATCCGTCACCGGCGTGTTGCGAGAGAGCGAGAGTGAGCCATACAGAGTGCATTTGCGCAGCAGTTACGCCTAAGCTTATGACTTATGTTGATCCTAGTCGCGCCATTCGGCTCATTCAAAGCTGCGGCCGTAGAGTCCCTCGCCATTTCAAATGTGGAAGTTTTACCACTCCATGA

Protein sequence

MVGIREGRWGLVMVVVAVMAMGVGEVMALTAAECKTERDMAVRECLAVVFGRNPSPACCERARVSHTECICAAVTPKLMTYVDPSRAIRLIQSCGRRVPRHFKCGSFTTP*

Homology

[Close]

BLAST of CSPI03G02210 vs. ExPASy TrEMBL
Match: A0A0A0L5D3 (AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G017110 PE=4 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 1.6e-55
Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0


Query: 1   MVGIREGRWGLVMVVVAVMAMGVGEVMALTAAECKTERDMAVRECLAVVFGRNPSPACCE 60
           MVGIREGRWGLVMVVVAVMAMGVGEVMALTAAECKTERDMAVRECLAVVFGRNPSPACCE
Sbjct: 1   MVGIREGRWGLVMVVVAVMAMGVGEVMALTAAECKTERDMAVRECLAVVFGRNPSPACCE 60

Query: 61  RARVSHTECICAAVTPKLMTYVDPSRAIRLIQSCGRRVPRHFKCGSFTTP 111
           RARVSHTECICAAVTPKLMTYVDPSRAIRLIQSCGRRVPRHFKCGSFTTP
Sbjct: 61  RARVSHTECICAAVTPKLMTYVDPSRAIRLIQSCGRRVPRHFKCGSFTTP 110

[Close]

BLAST of CSPI03G02210 vs. ExPASy TrEMBL
Match: A0A1S3BL40 (uncharacterized protein LOC103490836 OS=Cucumis melo OX=3656 GN=LOC103490836 PE=4 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 2.9e-49
Identity = 101/111 (90.99%), Postives = 105/111 (94.59%), Query Frame = 0


Query: 1   MVGIREGRWGLVM-VVVAVMAMGVGEVMALTAAECKTERDMAVRECLAVVFGRNPSPACC 60
           MVGIREGRWGLVM VV+AVMAMGVGEV ALTAAECK ERDMAV++CLAVVFGRNPSPACC
Sbjct: 1   MVGIREGRWGLVMGVVLAVMAMGVGEVAALTAAECKAERDMAVKKCLAVVFGRNPSPACC 60

Query: 61  ERARVSHTECICAAVTPKLMTYVDPSRAIRLIQSCGRRVPRHFKCGSFTTP 111
           ERARVSH ECIC AVT KLMTYVDPSRAIRLIQSCGRRVPRHFKCGS+TTP
Sbjct: 61  ERARVSHAECICPAVTSKLMTYVDPSRAIRLIQSCGRRVPRHFKCGSYTTP 111

[Close]

BLAST of CSPI03G02210 vs. ExPASy TrEMBL
Match: A0A5A7TC47 (AAI domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1017G00830 PE=4 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 8.0e-47
Identity = 98/107 (91.59%), Postives = 101/107 (94.39%), Query Frame = 0


Query: 1   MVGIREGRWGLVM-VVVAVMAMGVGEVMALTAAECKTERDMAVRECLAVVFGRNPSPACC 60
           MVGIREGRWGLVM VV+AVMAMGVGEV ALTAAECK ERDMAV++CLAVVFGRNPSPACC
Sbjct: 1   MVGIREGRWGLVMGVVLAVMAMGVGEVAALTAAECKAERDMAVKKCLAVVFGRNPSPACC 60

Query: 61  ERARVSHTECICAAVTPKLMTYVDPSRAIRLIQSCGRRVPRHFKCGS 107
           ERARVSH ECIC AVT KLMTYVDPSRAIRLIQSCGRRVPRHFKCGS
Sbjct: 61  ERARVSHAECICPAVTSKLMTYVDPSRAIRLIQSCGRRVPRHFKCGS 107

[Close]

BLAST of CSPI03G02210 vs. ExPASy TrEMBL
Match: A0A0A0L677 (AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G073790 PE=4 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 3.7e-44
Identity = 91/111 (81.98%), Postives = 99/111 (89.19%), Query Frame = 0


Query: 1   MVG-IREGRWGLVMVVVAVMAMGVGEVMALTAAECKTERDMAVRECLAVVFGRNPSPACC 60
           MVG I+ GRWGLVM VVA+MAM VGEV ALTAAEC+ ERDMAV  C +V+FGRNPSPACC
Sbjct: 1   MVGIIKMGRWGLVMAVVAIMAMAVGEVAALTAAECQAERDMAVNACKSVLFGRNPSPACC 60

Query: 61  ERARVSHTECICAAVTPKLMTYVDPSRAIRLIQSCGRRVPRHFKCGSFTTP 111
           +RARVSHT CIC AVTPKLMTYVDP RAIRLI+SCGR+VPRHFKCGSFTTP
Sbjct: 61  QRARVSHTVCICPAVTPKLMTYVDPIRAIRLIESCGRKVPRHFKCGSFTTP 111

[Close]

BLAST of CSPI03G02210 vs. ExPASy TrEMBL
Match: A0A1S3BLC9 (uncharacterized protein LOC103491080 OS=Cucumis melo OX=3656 GN=LOC103491080 PE=4 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 6.4e-44
Identity = 90/108 (83.33%), Postives = 97/108 (89.81%), Query Frame = 0


Query: 4   IREGRWGLVMVVVA-VMAMGVGEVMALTAAECKTERDMAVRECLAVVFGRNPSPACCERA 63
           IR GRWGLVM VVA +MAM VGEV ALTAAEC+ ERDMAV  C +V+FGRNPSPACC+RA
Sbjct: 5   IRMGRWGLVMAVVAIIMAMAVGEVAALTAAECQAERDMAVNACKSVLFGRNPSPACCQRA 64

Query: 64  RVSHTECICAAVTPKLMTYVDPSRAIRLIQSCGRRVPRHFKCGSFTTP 111
           RVSHTECIC AVTPKLMTYVDP RAIRLI+SCGR+VPRHFKCGSFTTP
Sbjct: 65  RVSHTECICPAVTPKLMTYVDPIRAIRLIESCGRKVPRHFKCGSFTTP 112

[Close]

BLAST of CSPI03G02210 vs. NCBI nr
Match: XP_004147240.1 (uncharacterized protein LOC101207186 [Cucumis sativus] >KGN55817.1 hypothetical protein Csa_009793 [Cucumis sativus])

HSP 1 Score: 224.9 bits (572), Expect = 3.3e-55
Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0


Query: 1   MVGIREGRWGLVMVVVAVMAMGVGEVMALTAAECKTERDMAVRECLAVVFGRNPSPACCE 60
           MVGIREGRWGLVMVVVAVMAMGVGEVMALTAAECKTERDMAVRECLAVVFGRNPSPACCE
Sbjct: 1   MVGIREGRWGLVMVVVAVMAMGVGEVMALTAAECKTERDMAVRECLAVVFGRNPSPACCE 60

Query: 61  RARVSHTECICAAVTPKLMTYVDPSRAIRLIQSCGRRVPRHFKCGSFTTP 111
           RARVSHTECICAAVTPKLMTYVDPSRAIRLIQSCGRRVPRHFKCGSFTTP
Sbjct: 61  RARVSHTECICAAVTPKLMTYVDPSRAIRLIQSCGRRVPRHFKCGSFTTP 110

[Close]

BLAST of CSPI03G02210 vs. NCBI nr
Match: XP_008448771.1 (PREDICTED: uncharacterized protein LOC103490836 [Cucumis melo])

HSP 1 Score: 204.1 bits (518), Expect = 6.1e-49
Identity = 101/111 (90.99%), Postives = 105/111 (94.59%), Query Frame = 0


Query: 1   MVGIREGRWGLVM-VVVAVMAMGVGEVMALTAAECKTERDMAVRECLAVVFGRNPSPACC 60
           MVGIREGRWGLVM VV+AVMAMGVGEV ALTAAECK ERDMAV++CLAVVFGRNPSPACC
Sbjct: 1   MVGIREGRWGLVMGVVLAVMAMGVGEVAALTAAECKAERDMAVKKCLAVVFGRNPSPACC 60

Query: 61  ERARVSHTECICAAVTPKLMTYVDPSRAIRLIQSCGRRVPRHFKCGSFTTP 111
           ERARVSH ECIC AVT KLMTYVDPSRAIRLIQSCGRRVPRHFKCGS+TTP
Sbjct: 61  ERARVSHAECICPAVTSKLMTYVDPSRAIRLIQSCGRRVPRHFKCGSYTTP 111

[Close]

BLAST of CSPI03G02210 vs. NCBI nr
Match: KAA0041042.1 (uncharacterized protein E6C27_scaffold477G00110 [Cucumis melo var. makuwa] >TYK12068.1 uncharacterized protein E5676_scaffold1017G00830 [Cucumis melo var. makuwa])

HSP 1 Score: 196.1 bits (497), Expect = 1.7e-46
Identity = 98/107 (91.59%), Postives = 101/107 (94.39%), Query Frame = 0


Query: 1   MVGIREGRWGLVM-VVVAVMAMGVGEVMALTAAECKTERDMAVRECLAVVFGRNPSPACC 60
           MVGIREGRWGLVM VV+AVMAMGVGEV ALTAAECK ERDMAV++CLAVVFGRNPSPACC
Sbjct: 1   MVGIREGRWGLVMGVVLAVMAMGVGEVAALTAAECKAERDMAVKKCLAVVFGRNPSPACC 60

Query: 61  ERARVSHTECICAAVTPKLMTYVDPSRAIRLIQSCGRRVPRHFKCGS 107
           ERARVSH ECIC AVT KLMTYVDPSRAIRLIQSCGRRVPRHFKCGS
Sbjct: 61  ERARVSHAECICPAVTSKLMTYVDPSRAIRLIQSCGRRVPRHFKCGS 107

[Close]

BLAST of CSPI03G02210 vs. NCBI nr
Match: XP_011650514.1 (uncharacterized protein LOC101222349 [Cucumis sativus] >KGN56087.1 hypothetical protein Csa_011247 [Cucumis sativus])

HSP 1 Score: 187.2 bits (474), Expect = 7.7e-44
Identity = 91/111 (81.98%), Postives = 99/111 (89.19%), Query Frame = 0


Query: 1   MVG-IREGRWGLVMVVVAVMAMGVGEVMALTAAECKTERDMAVRECLAVVFGRNPSPACC 60
           MVG I+ GRWGLVM VVA+MAM VGEV ALTAAEC+ ERDMAV  C +V+FGRNPSPACC
Sbjct: 1   MVGIIKMGRWGLVMAVVAIMAMAVGEVAALTAAECQAERDMAVNACKSVLFGRNPSPACC 60

Query: 61  ERARVSHTECICAAVTPKLMTYVDPSRAIRLIQSCGRRVPRHFKCGSFTTP 111
           +RARVSHT CIC AVTPKLMTYVDP RAIRLI+SCGR+VPRHFKCGSFTTP
Sbjct: 61  QRARVSHTVCICPAVTPKLMTYVDPIRAIRLIESCGRKVPRHFKCGSFTTP 111

[Close]

BLAST of CSPI03G02210 vs. NCBI nr
Match: XP_023553118.1 (uncharacterized protein LOC111810619 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 186.8 bits (473), Expect = 1.0e-43
Identity = 90/110 (81.82%), Postives = 101/110 (91.82%), Query Frame = 0


Query: 2   VGIREGRWGLVM-VVVAVMAMGVGEVMALTAAECKTERDMAVRECLAVVFGRNPSPACCE 61
           +GI   RWGLV+ VVV VMA+ VGEV ALTAA+CK ER+MAV+ECLAVVFGRNPSPACC+
Sbjct: 4   MGIGMRRWGLVLAVVVVVMAVAVGEVAALTAAQCKAERNMAVKECLAVVFGRNPSPACCQ 63

Query: 62  RARVSHTECICAAVTPKLMTYVDPSRAIRLIQSCGRRVPRHFKCGSFTTP 111
           RARVSHTECIC AVTPKLMTYVDP+RAIRLI+SCGR+VPRHFKCGS+TTP
Sbjct: 64  RARVSHTECICPAVTPKLMTYVDPNRAIRLIESCGRKVPRHFKCGSYTTP 113

[Close]

BLAST of CSPI03G02210 vs. TAIR 10
Match: AT4G33550.2 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 58.5 bits (140), Expect = 3.8e-09
Identity = 30/105 (28.57%), Postives = 50/105 (47.62%), Query Frame = 0


Query: 11  LVMVVVAVMAMGVGEVMALTAAECKTERDMAVRECLAVVF-----GRNPSPACCERARVS 70
           LV++ +A+  +G   V    A  C       + EC   V       + PS +CC   R  
Sbjct: 9   LVILAIALFMIGSDNVHVAKAQVCGANLSGLMNECQRYVSNAGPNSQPPSRSCCALIRPI 68

Query: 71  HTECICAAVTPKLMTYVDPSRAIRLIQSCGRRVPRHFKCGSFTTP 111
              C C  V+  +  Y+D  + + + +SCG+++P  +KCGS+T P
Sbjct: 69  DVPCACRYVSRDVTNYIDMDKVVYVARSCGKKIPSGYKCGSYTIP 113

[Close]

BLAST of CSPI03G02210 vs. TAIR 10
Match: AT4G33550.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 52.4 bits (124), Expect = 2.8e-07
Identity = 28/101 (27.72%), Postives = 47/101 (46.53%), Query Frame = 0


Query: 11  LVMVVVAVMAMGVGEVMALTAAECKTERDMAVRECLAVVF-----GRNPSPACCERARVS 70
           LV++ +A+  +G   V    A  C       + EC   V       + PS +CC   R  
Sbjct: 9   LVILAIALFMIGSDNVHVAKAQVCGANLSGLMNECQRYVSNAGPNSQPPSRSCCALIRPI 68

Query: 71  HTECICAAVTPKLMTYVDPSRAIRLIQSCGRRVPRHFKCGS 107
              C C  V+  +  Y+D  + + + +SCG+++P  +KCGS
Sbjct: 69  DVPCACRYVSRDVTNYIDMDKVVYVARSCGKKIPSGYKCGS 109

The following BLAST results are available for this feature:

BLAST of CSPI03G02210 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI03G02210 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L5D3	1.6e-55	100.00	AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G017110 PE=4 SV...	[more]
A0A1S3BL40	2.9e-49	90.99	uncharacterized protein LOC103490836 OS=Cucumis melo OX=3656 GN=LOC103490836 PE=...	[more]
A0A5A7TC47	8.0e-47	91.59	AAI domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A0A0L677	3.7e-44	81.98	AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G073790 PE=4 SV...	[more]
A0A1S3BLC9	6.4e-44	83.33	uncharacterized protein LOC103491080 OS=Cucumis melo OX=3656 GN=LOC103491080 PE=...	[more]

BLAST of CSPI03G02210 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004147240.1	3.3e-55	100.00	uncharacterized protein LOC101207186 [Cucumis sativus] >KGN55817.1 hypothetical ...	[more]
XP_008448771.1	6.1e-49	90.99	PREDICTED: uncharacterized protein LOC103490836 [Cucumis melo]	[more]
KAA0041042.1	1.7e-46	91.59	uncharacterized protein E6C27_scaffold477G00110 [Cucumis melo var. makuwa] >TYK1...	[more]
XP_011650514.1	7.7e-44	81.98	uncharacterized protein LOC101222349 [Cucumis sativus] >KGN56087.1 hypothetical ...	[more]
XP_023553118.1	1.0e-43	81.82	uncharacterized protein LOC111810619 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CSPI03G02210 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G33550.2	3.8e-09	28.57	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT4G33550.1	2.8e-07	27.72	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	PFAM	PF14368	LTP_2	coord: 14..104 e-value: 3.2E-10 score: 40.0
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	GENE3D	1.10.110.10		coord: 32..102 e-value: 2.4E-8 score: 36.1
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	SUPERFAMILY	47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 42..100
None	No IPR available	PANTHER	PTHR33286:SF38	SUBFAMILY NOT NAMED	coord: 8..110
None	No IPR available	PANTHER	PTHR33286	BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN	coord: 8..110

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G02210.1	CSPI03G02210.1	mRNA