CSPI03G01850 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI03G01850
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Pentatricopeptide repeat-containing protein
Location	Chr3: 1287774 .. 1289906 (+)
RNA-Seq Expression	CSPI03G01850
Synteny	CSPI03G01850

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGTTCCTCTTTCTTCCTCTCTCGACCTCAAGCTCAAACCAACACCCATCTTCTTCACTTCCCCTCTCCGCCGGAAGAATGTTACCAAACGATTAACACTCCTCTGTTCCTCTTCCAAATCCCCACGAAAGCCTTCTTCAGTTTCATCACAATCGGTTGACAACAAAAACCCTTCTCTATCCGAGCAGCTCAAGAATCTCTCCACAACCACACTTTCCAATGCACCCAACGACGAAACCCGTCTCTTATCTAAGCCTAAATCCACTTGGGTTAACCCCACCAAACCTAAACGCTCTGTTCTATCTCTCCAGAGACAAAAGCGTTCTTCTTACTCTTATAACCCCAAGATGCGAGACCTTAAATCCTTTGCCCATAAGCTCAATGCCTGTGATTCCTCTGATGACGCTTCTTTCATTGCGGCTCTTGAGGAAATTCCTCACCCACCCACTAAAGAAAATGCCCTTCTCATTCTCAATAGCTTGAGGCCGTGGCAGAAAACCCATTTGTTCTTCAATTGGATTAAGTCCCAGAATTTGTTTCCTATGGAGACTATCTTCTACAATGTGGCTATGAAGTCTTTGAGGTATGGTAGGCAGTTTCAACTTATTGAAGATCTTGCTAACGAGATGATTAGCGCTGGGATTGAGCTTGATAACATTACTTATTCTACTATTATTACTTGTGCTAAAAAGTGTAGTAGGTTTGATAAGGCAATGGAGTGGTTTGAGAGAATGTATAAAACTGGTTTGATGCCTGATGAGGTTACTTACTCTGCTATTTTAGATGTTTATGCTAATTTAGGGAAAGTTGAGGAGGTTCTTAGTTTGTATGAAAGAGGGAGAGCTAGTGGTTGGACGCCTGATCCTTATACATTTTCTGTGTTGGGAAAGATGTTTGGAGAGGCAGGGGATTATGATGGGATTATGTATGTTTTGCAAGAAATGAAATCTATTGAGATGCAGCCTAATCTTGTTGTGTATAACACTTTGTTGGATGCAATGGGGAAGGCTGGGAAACCTGGTTTCGCAAGAAGTTTGTTCGATGAAATGGTTGAATCGGGGATAACGCCAAATGAGAAGACATTGACTGCTCTGGTTAAGATTTATGGAAAGGCAAGGTGGGCAAGAGATGCTTTAGACTTGTGGGAGCGGATGAGATCGAATGGGTGGCCGATGGATTTCATTTTGTATAATACATTATTGAATATGTGTGCTGATCTTGGTTTGGAGGAGGAAGCTGAGACGCTCTTTGAAGAGATGAAGAAGTCAAAGCATTCTAGGCCAGATAGTTGGAGCTACACAGCAATGTTGAATATATATGGTAGTGGAGGTAATGTGAAAAGATCCATGGAGTTGTTCGAAGAAATGCTCGAGTTGGGTGTTGAGATTAACGTGATGTGTTGCACTTGTTTGATTCAATGCTTGGGGAAATCTGGGAGAATCGATGATCTAGTTCGAGTTTTCAATGTTTCGGTACAAAAAGGGATTAAGCCAGACGATAGGCTTTGTGGTTGCTTGTTGTCTGTTCTGTCCTTGTGTTACAATAGTGAAGATATTAACAAGGTATTCACTTGTCTACAACAAGCTAACCCTAAGTTAGTTTCCTTCATAAATCTTCTGCAACAAAACGACATTACCTTTGAAGTTGTCAAAAACGAATTCAGAAACATTCTCGGTGAGACAGCCCCTGAAGCTCGACGTCCTTTCTGCAATTGCTTGATTGATATATGTCGAAACCAAAATCTTCGCGAGAGAGCTCATGAATTGCTCTACTTGGGAAGTTTATATGGATTGTACCCAGGCCTACACAACAAAACTGAGACCGAATGGTGCCTGGATGTTCGATCTCTGTCAGTAGGTGCAGCTCAAACTGCACTTGAAGAATGGATGATAACTCTATCAAAAATCGTACAACGAGAAGAAGCATTACCTGAATTGTTATCAGCTCAAACCGGAGCAGGAACTCACAGGTTTTCTCAAGGACTAGCCAATTCATTTGCTTCTCATGTAGACAAACTTGCTGCTCCATTTCAACTGCGAGAAGATCGAGCTGGTTGGTTTGTAGCCACAAGGGAGGATTTAGTTACATGGGTGCATTCAAGAGTACCATCTGTGGCTGCCACAGCTTAA

mRNA sequence

ATGGCGGTTCCTCTTTCTTCCTCTCTCGACCTCAAGCTCAAACCAACACCCATCTTCTTCACTTCCCCTCTCCGCCGGAAGAATGTTACCAAACGATTAACACTCCTCTGTTCCTCTTCCAAATCCCCACGAAAGCCTTCTTCAGTTTCATCACAATCGGTTGACAACAAAAACCCTTCTCTATCCGAGCAGCTCAAGAATCTCTCCACAACCACACTTTCCAATGCACCCAACGACGAAACCCGTCTCTTATCTAAGCCTAAATCCACTTGGGTTAACCCCACCAAACCTAAACGCTCTGTTCTATCTCTCCAGAGACAAAAGCGTTCTTCTTACTCTTATAACCCCAAGATGCGAGACCTTAAATCCTTTGCCCATAAGCTCAATGCCTGTGATTCCTCTGATGACGCTTCTTTCATTGCGGCTCTTGAGGAAATTCCTCACCCACCCACTAAAGAAAATGCCCTTCTCATTCTCAATAGCTTGAGGCCGTGGCAGAAAACCCATTTGTTCTTCAATTGGATTAAGTCCCAGAATTTGTTTCCTATGGAGACTATCTTCTACAATGTGGCTATGAAGTCTTTGAGGTATGGTAGGCAGTTTCAACTTATTGAAGATCTTGCTAACGAGATGATTAGCGCTGGGATTGAGCTTGATAACATTACTTATTCTACTATTATTACTTGTGCTAAAAAGTGTAGTAGGTTTGATAAGGCAATGGAGTGGTTTGAGAGAATGTATAAAACTGGTTTGATGCCTGATGAGGTTACTTACTCTGCTATTTTAGATGTTTATGCTAATTTAGGGAAAGTTGAGGAGGTTCTTAGTTTGTATGAAAGAGGGAGAGCTAGTGGTTGGACGCCTGATCCTTATACATTTTCTGTGTTGGGAAAGATGTTTGGAGAGGCAGGGGATTATGATGGGATTATGTATGTTTTGCAAGAAATGAAATCTATTGAGATGCAGCCTAATCTTGTTGTGTATAACACTTTGTTGGATGCAATGGGGAAGGCTGGGAAACCTGGTTTCGCAAGAAGTTTGTTCGATGAAATGGTTGAATCGGGGATAACGCCAAATGAGAAGACATTGACTGCTCTGGTTAAGATTTATGGAAAGGCAAGGTGGGCAAGAGATGCTTTAGACTTGTGGGAGCGGATGAGATCGAATGGGTGGCCGATGGATTTCATTTTGTATAATACATTATTGAATATGTGTGCTGATCTTGGTTTGGAGGAGGAAGCTGAGACGCTCTTTGAAGAGATGAAGAAGTCAAAGCATTCTAGGCCAGATAGTTGGAGCTACACAGCAATGTTGAATATATATGGTAGTGGAGGTAATGTGAAAAGATCCATGGAGTTGTTCGAAGAAATGCTCGAGTTGGGTGTTGAGATTAACGTGATGTGTTGCACTTGTTTGATTCAATGCTTGGGGAAATCTGGGAGAATCGATGATCTAGTTCGAGTTTTCAATGTTTCGGTACAAAAAGGGATTAAGCCAGACGATAGGCTTTGTGGTTGCTTGTTGTCTGTTCTGTCCTTGTGTTACAATAGTGAAGATATTAACAAGGTATTCACTTGTCTACAACAAGCTAACCCTAAGTTAGTTTCCTTCATAAATCTTCTGCAACAAAACGACATTACCTTTGAAGTTGTCAAAAACGAATTCAGAAACATTCTCGGTGAGACAGCCCCTGAAGCTCGACGTCCTTTCTGCAATTGCTTGATTGATATATGTCGAAACCAAAATCTTCGCGAGAGAGCTCATGAATTGCTCTACTTGGGAAGTTTATATGGATTGTACCCAGGCCTACACAACAAAACTGAGACCGAATGGTGCCTGGATGTTCGATCTCTGTCAGTAGGTGCAGCTCAAACTGCACTTGAAGAATGGATGATAACTCTATCAAAAATCGTACAACGAGAAGAAGCATTACCTGAATTGTTATCAGCTCAAACCGGAGCAGGAACTCACAGGTTTTCTCAAGGACTAGCCAATTCATTTGCTTCTCATGTAGACAAACTTGCTGCTCCATTTCAACTGCGAGAAGATCGAGCTGGTTGGTTTGTAGCCACAAGGGAGGATTTAGTTACATGGGTGCATTCAAGAGTACCATCTGTGGCTGCCACAGCTTAA

Coding sequence (CDS)

ATGGCGGTTCCTCTTTCTTCCTCTCTCGACCTCAAGCTCAAACCAACACCCATCTTCTTCACTTCCCCTCTCCGCCGGAAGAATGTTACCAAACGATTAACACTCCTCTGTTCCTCTTCCAAATCCCCACGAAAGCCTTCTTCAGTTTCATCACAATCGGTTGACAACAAAAACCCTTCTCTATCCGAGCAGCTCAAGAATCTCTCCACAACCACACTTTCCAATGCACCCAACGACGAAACCCGTCTCTTATCTAAGCCTAAATCCACTTGGGTTAACCCCACCAAACCTAAACGCTCTGTTCTATCTCTCCAGAGACAAAAGCGTTCTTCTTACTCTTATAACCCCAAGATGCGAGACCTTAAATCCTTTGCCCATAAGCTCAATGCCTGTGATTCCTCTGATGACGCTTCTTTCATTGCGGCTCTTGAGGAAATTCCTCACCCACCCACTAAAGAAAATGCCCTTCTCATTCTCAATAGCTTGAGGCCGTGGCAGAAAACCCATTTGTTCTTCAATTGGATTAAGTCCCAGAATTTGTTTCCTATGGAGACTATCTTCTACAATGTGGCTATGAAGTCTTTGAGGTATGGTAGGCAGTTTCAACTTATTGAAGATCTTGCTAACGAGATGATTAGCGCTGGGATTGAGCTTGATAACATTACTTATTCTACTATTATTACTTGTGCTAAAAAGTGTAGTAGGTTTGATAAGGCAATGGAGTGGTTTGAGAGAATGTATAAAACTGGTTTGATGCCTGATGAGGTTACTTACTCTGCTATTTTAGATGTTTATGCTAATTTAGGGAAAGTTGAGGAGGTTCTTAGTTTGTATGAAAGAGGGAGAGCTAGTGGTTGGACGCCTGATCCTTATACATTTTCTGTGTTGGGAAAGATGTTTGGAGAGGCAGGGGATTATGATGGGATTATGTATGTTTTGCAAGAAATGAAATCTATTGAGATGCAGCCTAATCTTGTTGTGTATAACACTTTGTTGGATGCAATGGGGAAGGCTGGGAAACCTGGTTTCGCAAGAAGTTTGTTCGATGAAATGGTTGAATCGGGGATAACGCCAAATGAGAAGACATTGACTGCTCTGGTTAAGATTTATGGAAAGGCAAGGTGGGCAAGAGATGCTTTAGACTTGTGGGAGCGGATGAGATCGAATGGGTGGCCGATGGATTTCATTTTGTATAATACATTATTGAATATGTGTGCTGATCTTGGTTTGGAGGAGGAAGCTGAGACGCTCTTTGAAGAGATGAAGAAGTCAAAGCATTCTAGGCCAGATAGTTGGAGCTACACAGCAATGTTGAATATATATGGTAGTGGAGGTAATGTGAAAAGATCCATGGAGTTGTTCGAAGAAATGCTCGAGTTGGGTGTTGAGATTAACGTGATGTGTTGCACTTGTTTGATTCAATGCTTGGGGAAATCTGGGAGAATCGATGATCTAGTTCGAGTTTTCAATGTTTCGGTACAAAAAGGGATTAAGCCAGACGATAGGCTTTGTGGTTGCTTGTTGTCTGTTCTGTCCTTGTGTTACAATAGTGAAGATATTAACAAGGTATTCACTTGTCTACAACAAGCTAACCCTAAGTTAGTTTCCTTCATAAATCTTCTGCAACAAAACGACATTACCTTTGAAGTTGTCAAAAACGAATTCAGAAACATTCTCGGTGAGACAGCCCCTGAAGCTCGACGTCCTTTCTGCAATTGCTTGATTGATATATGTCGAAACCAAAATCTTCGCGAGAGAGCTCATGAATTGCTCTACTTGGGAAGTTTATATGGATTGTACCCAGGCCTACACAACAAAACTGAGACCGAATGGTGCCTGGATGTTCGATCTCTGTCAGTAGGTGCAGCTCAAACTGCACTTGAAGAATGGATGATAACTCTATCAAAAATCGTACAACGAGAAGAAGCATTACCTGAATTGTTATCAGCTCAAACCGGAGCAGGAACTCACAGGTTTTCTCAAGGACTAGCCAATTCATTTGCTTCTCATGTAGACAAACTTGCTGCTCCATTTCAACTGCGAGAAGATCGAGCTGGTTGGTTTGTAGCCACAAGGGAGGATTTAGTTACATGGGTGCATTCAAGAGTACCATCTGTGGCTGCCACAGCTTAA

Protein sequence

MAVPLSSSLDLKLKPTPIFFTSPLRRKNVTKRLTLLCSSSKSPRKPSSVSSQSVDNKNPSLSEQLKNLSTTTLSNAPNDETRLLSKPKSTWVNPTKPKRSVLSLQRQKRSSYSYNPKMRDLKSFAHKLNACDSSDDASFIAALEEIPHPPTKENALLILNSLRPWQKTHLFFNWIKSQNLFPMETIFYNVAMKSLRYGRQFQLIEDLANEMISAGIELDNITYSTIITCAKKCSRFDKAMEWFERMYKTGLMPDEVTYSAILDVYANLGKVEEVLSLYERGRASGWTPDPYTFSVLGKMFGEAGDYDGIMYVLQEMKSIEMQPNLVVYNTLLDAMGKAGKPGFARSLFDEMVESGITPNEKTLTALVKIYGKARWARDALDLWERMRSNGWPMDFILYNTLLNMCADLGLEEEAETLFEEMKKSKHSRPDSWSYTAMLNIYGSGGNVKRSMELFEEMLELGVEINVMCCTCLIQCLGKSGRIDDLVRVFNVSVQKGIKPDDRLCGCLLSVLSLCYNSEDINKVFTCLQQANPKLVSFINLLQQNDITFEVVKNEFRNILGETAPEARRPFCNCLIDICRNQNLRERAHELLYLGSLYGLYPGLHNKTETEWCLDVRSLSVGAAQTALEEWMITLSKIVQREEALPELLSAQTGAGTHRFSQGLANSFASHVDKLAAPFQLREDRAGWFVATREDLVTWVHSRVPSVAATA*

Homology

[Close]

BLAST of CSPI03G01850 vs. ExPASy Swiss-Prot
Match: Q9LS25 (Pentatricopeptide repeat-containing protein At5g46580, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g46580 PE=2 SV=1)

HSP 1 Score: 983.4 bits (2541), Expect = 1.3e-285
Identity = 476/716 (66.48%), Postives = 592/716 (82.68%), Query Frame = 0


Query: 1   MAVPLSSSLDLKLKPT-------PIFFTSPLRRKNVTKRLTLLCSSSKSPRKPSSVSSQS 60
           MA  L++++D+   P         +F    L R++ +++L + CSS K P+   ++  + 
Sbjct: 1   MATVLTTAIDVCFNPQNSDTKKHSLFLKPSLFRQSRSRKLNISCSSLKQPK---TLEEEP 60

Query: 61  VDNKNPSLSEQLKNLSTTTLSNAPNDETRLLSKPKSTWVNPTKPKRSVLSLQRQKRSSYS 120
           +  K PSLSEQLK LS TTL     ++T++LSKPKS WVNPT+PKRSVLSLQRQKRS+YS
Sbjct: 61  ITTKTPSLSEQLKPLSATTLR---QEQTQILSKPKSVWVNPTRPKRSVLSLQRQKRSAYS 120

Query: 121 YNPKMRDLKSFAHKLNACDSSDDASFIAALEEIPHPPTKENALLILNSLRPWQKTHLFFN 180
           YNP+++DL++FA KLN+   ++ + F++ L+EIPHPP ++NALL+LNSLR WQKTH FFN
Sbjct: 121 YNPQIKDLRAFALKLNSSIFTEKSEFLSLLDEIPHPPNRDNALLVLNSLREWQKTHTFFN 180

Query: 181 WIKSQNLFPMETIFYNVAMKSLRYGRQFQLIEDLANEMISAGIELDNITYSTIITCAKKC 240
           W+KS++LFPMETIFYNV MKSLR+GRQFQLIE++A EM+  G+ELDNITYSTIITCAK+C
Sbjct: 181 WVKSKSLFPMETIFYNVTMKSLRFGRQFQLIEEMALEMVKDGVELDNITYSTIITCAKRC 240

Query: 241 SRFDKAMEWFERMYKTGLMPDEVTYSAILDVYANLGKVEEVLSLYERGRASGWTPDPYTF 300
           + ++KA+EWFERMYKTGLMPDEVTYSAILDVY+  GKVEEVLSLYER  A+GW PD   F
Sbjct: 241 NLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAF 300

Query: 301 SVLGKMFGEAGDYDGIMYVLQEMKSIEMQPNLVVYNTLLDAMGKAGKPGFARSLFDEMVE 360
           SVLGKMFGEAGDYDGI YVLQEMKS++++PN+VVYNTLL+AMG+AGKPG ARSLF+EM+E
Sbjct: 301 SVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLE 360

Query: 361 SGITPNEKTLTALVKIYGKARWARDALDLWERMRSNGWPMDFILYNTLLNMCADLGLEEE 420
           +G+TPNEKTLTALVKIYGKARWARDAL LWE M++  WPMDFILYNTLLNMCAD+GLEEE
Sbjct: 361 AGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEE 420

Query: 421 AETLFEEMKKSKHSRPDSWSYTAMLNIYGSGGNVKRSMELFEEMLELGVEINVMCCTCLI 480
           AE LF +MK+S   RPD++SYTAMLNIYGSGG  +++MELFEEML+ GV++NVM CTCL+
Sbjct: 421 AERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCLV 480

Query: 481 QCLGKSGRIDDLVRVFNVSVQKGIKPDDRLCGCLLSVLSLCYNSEDINKVFTCLQQANPK 540
           QCLGK+ RIDD+V VF++S+++G+KPDDRLCGCLLSV++LC +SED  KV  CL++AN K
Sbjct: 481 QCLGKAKRIDDVVYVFDLSIKRGVKPDDRLCGCLLSVMALCESSEDAEKVMACLERANKK 540

Query: 541 LVSFINLLQQNDITFEVVKNEFRNILGETAPEARRPFCNCLIDICRNQNLRERAHELLYL 600
           LV+F+NL+      +E VK EF+ ++  T  EARRPFCNCLIDICR  N  ERAHELLYL
Sbjct: 541 LVTFVNLIVDEKTEYETVKEEFKLVINATQVEARRPFCNCLIDICRGNNRHERAHELLYL 600

Query: 601 GSLYGLYPGLHNKTETEWCLDVRSLSVGAAQTALEEWMITLSKIVQREEALPELLSAQTG 660
           G+L+GLYPGLHNKT  EW LDVRSLSVGAA+TALEEWM TL+ I++R+E LPEL  AQTG
Sbjct: 601 GTLFGLYPGLHNKTIKEWSLDVRSLSVGAAETALEEWMRTLANIIKRQEELPELFLAQTG 660

Query: 661 AGTHRFSQGLANSFASHVDKLAAPFQLREDRAGWFVATREDLVTWVHSRVPSVAAT 710
            GTHRFSQGLANSFA H+ +L+APF+ + DR G FVAT+EDLV+W+ S+ P +  +
Sbjct: 661 TGTHRFSQGLANSFALHLQQLSAPFR-QSDRPGIFVATKEDLVSWLESKFPPLVTS 709

[Close]

BLAST of CSPI03G01850 vs. ExPASy Swiss-Prot
Match: B4F8Z1 (Pentatricopeptide repeat-containing protein ATP4, chloroplastic OS=Zea mays OX=4577 GN=ATP4 PE=2 SV=1)

HSP 1 Score: 449.5 bits (1155), Expect = 7.0e-125
Identity = 254/680 (37.35%), Postives = 385/680 (56.62%), Query Frame = 0


Query: 38  SSSKSPRKPSS--VSSQSVDNKNPSLSEQLKNLSTTTLSNAPNDETRLLSKPKSTWVNPT 97
           S+S +P+ PSS   +  SV    P    Q ++ S  + SN         S  +  WVNP 
Sbjct: 23  SASFNPKNPSSPVAAHVSVQETPP----QPQDPSPPSDSNPNGTRPSSSSNTRFLWVNPN 82

Query: 98  KPKRSVLSLQRQKRSSYSYNPKMRDLKSFAHKLNACDSSDDASFIAALEEIPHPPTKENA 157
            P+ + ++  R      + + +   L S A  L AC++++ A   A     P PP++++A
Sbjct: 83  SPRAADVARAR------AGSGRRARLASAAAALGACETTESAVEAALQAAFPEPPSEQDA 142

Query: 158 LLILNSLRPW--QKTHLFFNWIKSQNLFPMETIFYNVAMKSLRYGRQFQLIEDLANEMIS 217
           +++LN+      +   L   W         + I YNV +K LR  R +   E L  EM+ 
Sbjct: 143 VIVLNTAAATRAETAVLALRWFLGNAKVRKKVILYNVVLKLLRKKRLWSETEALWAEMLR 202

Query: 218 AGIELDNITYSTIITCAKKCSRFDKAMEWFERMYKTGLMPDEVTYSAILDVYANLGKVEE 277
            G++ DN T+ST+I+CA+ C    KA+EWF++M + G  PD +TYSA++D Y + G  E 
Sbjct: 203 DGVQPDNATFSTVISCARACGLHSKAVEWFDKMPEFGCSPDMLTYSAVIDAYGHAGNSEA 262

Query: 278 VLSLYERGRASGWTPDPYTFSVLGKMFGEAGDYDGIMYVLQEMKSIEMQPNLVVYNTLLD 337
            L LY+R RA  W  DP   S + K+   +G++DG + V +EMK+I ++PNLVVYNT+LD
Sbjct: 263 ALRLYDRARAEKWQLDPVICSTVIKVHSTSGNFDGALNVFEEMKAIGVRPNLVVYNTMLD 322

Query: 338 AMGKAGKPGFARSLFDEMVESGITPNEKTLTALVKIYGKARWARDALDLWERMRSNGWPM 397
           AMG+A +P   +++  EMV+  + P+  T   L+  Y +AR+  DA+ ++  M+     +
Sbjct: 323 AMGRALRPWVVKTIHREMVDQQVQPSRATYCCLLHAYTRARYGEDAMAVYRLMKDEAMGI 382

Query: 398 DFILYNTLLNMCADLGLEEEAETLFEEMKKS--KHSRPDSWSYTAMLNIYGSGGNVKRSM 457
           D +LYN LL+MCAD+G  +EAE +F +MK S   HS+PDSWSY++M+ +Y S  NV  + 
Sbjct: 383 DVMLYNMLLSMCADIGYVDEAEEIFRDMKASMGAHSKPDSWSYSSMVTLYSSTANVLSAE 442

Query: 458 ELFEEMLELGVEINVMCCTCLIQCLGKSGRIDDLVRVFNVSVQKGIKPDDRLCGCLLSVL 517
            +  EM+E G + N+   T LI+C GK GR DD+VR F +    GI PDDR CGCLLSV 
Sbjct: 443 GILNEMVEAGFKPNIFVLTSLIRCYGKVGRTDDVVRSFGMLQDLGIIPDDRFCGCLLSVA 502

Query: 518 SLCYNSEDINKVFTCLQQANPKLVSFINLLQQNDITFEVVKNEFRNILGETAPEARRPFC 577
           +    +E++ KV +C++++N +L + + LL     + E  +   R +L  +    + P+C
Sbjct: 503 ANT-PAEELGKVISCIERSNVQLGAVVKLLVDRS-SSESFREAARELLRSSRGVVKMPYC 562

Query: 578 NCLIDICRNQNLRERAHELLYLGSLYGLYPGLHNKTETEWCLDVRSLSVGAAQTALEEWM 637
           NCL+D+C N N  E+A  LL      G+Y  +  +T+T+W L +R LSVGAA T L  WM
Sbjct: 563 NCLMDLCVNLNQMEKACALLDAAQQLGIYANIQTRTQTQWSLHLRGLSVGAALTTLHVWM 622

Query: 638 ITLSKIVQR-EEALPELLSAQTGAGTHRFS-QGLANSFASHVDKLAAPFQLREDRAGWFV 697
             L   +Q   E LP LL   TG G + +S +GLA  F +H+ +L APF    D+AGWF+
Sbjct: 623 NDLYTSLQTGNEGLPPLLGIHTGQGKNTYSDRGLAAMFEAHLKELDAPFHEAPDKAGWFL 682

Query: 698 ATREDLVTWVHSRVPSVAAT 710
            T      W+ S+  S   T
Sbjct: 683 TTNVAAKQWLESKAASELVT 690

[Close]

BLAST of CSPI03G01850 vs. ExPASy Swiss-Prot
Match: Q8GWE0 (Pentatricopeptide repeat-containing protein At4g16390, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=P67 PE=1 SV=3)

HSP 1 Score: 448.4 bits (1152), Expect = 1.6e-124
Identity = 236/615 (38.37%), Postives = 365/615 (59.35%), Query Frame = 0


Query: 91  WVNPTKPKRSVLSLQRQKRSSYSYNPKMRDLKSFAHKLNACDSSDDASFIAALEEIPHPP 150
           WVNP  P+ S L   R+K    SY+ +   L   A  L+AC   ++A     +       
Sbjct: 89  WVNPKSPRASQL---RRK----SYDSRYSSLIKLAESLDAC-KPNEADVCDVITGFGGKL 148

Query: 151 TKENALLILNSLRPWQKTHLFFNWIKSQNLFPMETIFYNVAMKSLRYGRQFQLIEDLANE 210
            +++A++ LN++   +   L  N +        E I YNV MK  R  +  +  E L +E
Sbjct: 149 FEQDAVVTLNNMTNPETAPLVLNNLLETMKPSREVILYNVTMKVFRKSKDLEKSEKLFDE 208

Query: 211 MISAGIELDNITYSTIITCAKKCSRFDKAMEWFERMYKTGLMPDEVTYSAILDVYANLGK 270
           M+  GI+ DN T++TII+CA++     +A+EWFE+M   G  PD VT +A++D Y   G 
Sbjct: 209 MLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGN 268

Query: 271 VEEVLSLYERGRASGWTPDPYTFSVLGKMFGEAGDYDGIMYVLQEMKSIEMQPNLVVYNT 330
           V+  LSLY+R R   W  D  TFS L +++G +G+YDG + + +EMK++ ++PNLV+YN 
Sbjct: 269 VDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNR 328

Query: 331 LLDAMGKAGKPGFARSLFDEMVESGITPNEKTLTALVKIYGKARWARDALDLWERMRSNG 390
           L+D+MG+A +P  A+ ++ +++ +G TPN  T  ALV+ YG+AR+  DAL ++  M+  G
Sbjct: 329 LIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKG 388

Query: 391 WPMDFILYNTLLNMCADLGLEEEAETLFEEMKKSKHSRPDSWSYTAMLNIYGSGGNVKRS 450
             +  ILYNTLL+MCAD    +EA  +F++MK  +   PDSW++++++ +Y   G V  +
Sbjct: 389 LSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSEA 448

Query: 451 MELFEEMLELGVEINVMCCTCLIQCLGKSGRIDDLVRVFNVSVQKGIKPDDRLCGCLLSV 510
                +M E G E  +   T +IQC GK+ ++DD+VR F+  ++ GI PDDR CGCLL+V
Sbjct: 449 EAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVLELGITPDDRFCGCLLNV 508

Query: 511 LSLCYNSEDINKVFTCLQQANPKLVSFINLL-QQNDITFEVVKNEFRNILGETAPEARRP 570
           ++    SE+I K+  C+++A PKL   + +L ++ +    V K E   ++     + ++ 
Sbjct: 509 MTQT-PSEEIGKLIGCVEKAKPKLGQVVKMLVEEQNCEEGVFKKEASELIDSIGSDVKKA 568

Query: 571 FCNCLIDICRNQNLRERAHELLYLGSLYGLYPGLHNKTETEWCLDVRSLSVGAAQTALEE 630
           + NCLID+C N N  ERA E+L LG  Y +Y GL +K+ T+W L ++SLS+GAA TAL  
Sbjct: 569 YLNCLIDLCVNLNKLERACEILQLGLEYDIYTGLQSKSATQWSLHLKSLSLGAALTALHV 628

Query: 631 WMITLSK-IVQREEALPELLSAQTGAGTHRFS-QGLANSFASHVDKLAAPFQLREDRAGW 690
           WM  LS+  ++  E  P LL   TG G H++S +GLA  F SH+ +L APF    D+ GW
Sbjct: 629 WMNDLSEAALESGEEFPPLLGINTGHGKHKYSDKGLAAVFESHLKELNAPFHEAPDKVGW 688

Query: 691 FVATREDLVTWVHSR 703
           F+ T      W+ SR
Sbjct: 689 FLTTSVAAKAWLESR 694

[Close]

BLAST of CSPI03G01850 vs. ExPASy Swiss-Prot
Match: Q10PZ4 (Pentatricopeptide repeat-containing protein ATP4 homolog, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0215900 PE=3 SV=1)

HSP 1 Score: 441.8 bits (1135), Expect = 1.5e-122
Identity = 252/667 (37.78%), Postives = 376/667 (56.37%), Query Frame = 0


Query: 46  PSSVSSQSVDNKNPSLSEQLKNLSTTTLSNAPNDET----RLLSKPKSTWVNPTKPKRSV 105
           P    S S   KNPS S     +S       P+D      R  +  +  WVNP  P+ + 
Sbjct: 11  PHRAISLSFQPKNPSPSPATARVSVQDPPPPPSDANPSPGRSSNTSRYVWVNPNSPRAAG 70

Query: 106 LSLQRQKRSSYSYNPKMRDLKSFAHKLNACDSSDDASFIAALE-EIPHPPTKENALLILN 165
           L+  R      + + +   L + A  L AC++  +A   AALE   P PP++++A+++LN
Sbjct: 71  LARAR------AGSGRRARLAAAAAALAACEAG-EAPVAAALEAAFPEPPSEQDAVIVLN 130

Query: 166 --SLRPWQKTHLFFNWIKSQNLFPMETIFYNVAMKSLRYGRQFQLIEDLANEMISAGIEL 225
             S RP     L   W         E I YNVA+K+LR  R++   E L  EM+  G++ 
Sbjct: 131 TTSARP-AAVVLALWWFLRNAEVRKEVILYNVALKALRKRRRWSDAEALWEEMLREGVQP 190

Query: 226 DNITYSTIITCAKKCSRFDKAMEWFERMYKTGLMPDEVTYSAILDVYANLGKVEEVLSLY 285
           DN T+ST+I+CA+ C    KA+EWFE+M   G  PD +TYSA++D Y   G  E  L LY
Sbjct: 191 DNATFSTVISCARACGMPGKAVEWFEKMPDFGCSPDMLTYSAVIDAYGRAGDAETALRLY 250

Query: 286 ERGRASGWTPDPYTFSVLGKMFGEAGDYDGIMYVLQEMKSIEMQPNLVVYNTLLDAMGKA 345
           +R RA  W  DP   + + ++   +G++DG + V +EMK+  ++PNLVVYNT+LDAMG+A
Sbjct: 251 DRARAEKWQLDPVICATVIRVHSSSGNFDGALNVFEEMKAAGVKPNLVVYNTVLDAMGRA 310

Query: 346 GKPGFARSLFDEMVESGITPNEKTLTALVKIYGKARWARDALDLWERMRSNGWPMDFILY 405
            +P   +++  E+V     PN+ T   L+  Y +AR+  DA+ ++  M+     +D +LY
Sbjct: 311 MRPWVVKTIHRELVSQEAVPNKATYCCLLHAYTRARYGEDAMAVYRVMKDEVMDIDVVLY 370

Query: 406 NTLLNMCADLGLEEEAETLFEEMKKSKHSR--PDSWSYTAMLNIYGSGGNVKRSMELFEE 465
           N LL+MCAD+G  EEAE +F +MK S  SR  PDSWSY++M+ +Y   GNV  +  +  E
Sbjct: 371 NMLLSMCADIGYVEEAEEIFRDMKASMDSRSKPDSWSYSSMVTLYSCTGNVAGAEGILNE 430

Query: 466 MLELGVEINVMCCTCLIQCLGKSGRIDDLVRVFNVSVQKGIKPDDRLCGCLLSVLSLCYN 525
           M+E G + N+   T LI+C GK+GR DD+VR F +    GI PDDR CGCLL+V +    
Sbjct: 431 MVEAGFKPNIFILTSLIRCYGKAGRTDDVVRSFAMLEDLGITPDDRFCGCLLTV-AAGTP 490

Query: 526 SEDINKVFTCLQQANPKLVSFINLLQQNDITFEVVKNEFRNILGETAPEARRPFCNCLID 585
           ++++ KV  C+ +++ +L + + LL       E ++     +LG      R P+CNCL+D
Sbjct: 491 ADELGKVIGCIDRSSAQLGAVVRLLVDAAAPSEPLREAAGELLGGARGVVRMPYCNCLMD 550

Query: 586 ICRNQNLRERAHELLYLGSLYGLYPGLHNKTETEWCLDVRSLSVGAAQTALEEWMITLSK 645
           +  N +  E+A  LL +    G+Y  +  +T+T+W L +R LSVGAA T L  WM  L  
Sbjct: 551 LAVNLSQMEKACALLDVALRLGIYSNVQTRTQTQWSLHLRGLSVGAALTTLHVWMSDLYA 610

Query: 646 IVQREEALPELLSAQTGAGTHRFS-QGLANSFASHVDKLAAPFQLREDRAGWFVATREDL 703
            +Q  + LP LL   TG G + +S +GLA  F SH+ +L APF    D+AGWF+ T    
Sbjct: 611 ALQAGDELPPLLGIHTGQGKNTYSYKGLATVFESHLKELDAPFHEAPDKAGWFLTTSVAA 668

[Close]

BLAST of CSPI03G01850 vs. ExPASy Swiss-Prot
Match: Q8GYP6 (Pentatricopeptide repeat-containing protein At1g18900 OS=Arabidopsis thaliana OX=3702 GN=At1g18900 PE=2 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 1.5e-47
Identity = 130/549 (23.68%), Postives = 247/549 (44.99%), Query Frame = 0


Query: 158 ILNSLRPWQKTHLFFNWIKSQNLFPMETIFYNVAMKSLRYGRQFQLIEDLANEMISAGIE 217
           +L  +  +     FF W+K Q  F  +   Y   + +L   +QF  I  L +EM+  G +
Sbjct: 337 VLKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQ 396

Query: 218 LDNITYSTIITCAKKCSRFDKAMEWFERMYKTGLMPDEVTYSAILDVYANLGKVEEVLSL 277
            + +TY+ +I    + +  ++AM  F +M + G  PD VTY  ++D++A  G ++  + +
Sbjct: 397 PNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDM 456

Query: 278 YERGRASGWTPDPYTFSVLGKMFGEAGDYDGIMYVLQEMKSIEMQPNLVVYNTLLDAMGK 337
           Y+R +A G +PD +T+SV                                   +++ +GK
Sbjct: 457 YQRMQAGGLSPDTFTYSV-----------------------------------IINCLGK 516

Query: 338 AGKPGFARSLFDEMVESGITPNEKTLTALVKIYGKARWARDALDLWERMRSNGWPMDFIL 397
           AG    A  LF EMV+ G TPN  T   ++ ++ KAR  ++AL L+  M++ G+  D + 
Sbjct: 517 AGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVT 576

Query: 398 YNTLLNMCADLGLEEEAETLFEEMKKSKHSRPDSWSYTAMLNIYGSGGNVKRSMELFEEM 457
           Y+ ++ +    G  EEAE +F EM++ K+  PD   Y  +++++G  GNV+++ + ++ M
Sbjct: 577 YSIVMEVLGHCGYLEEAEAVFTEMQQ-KNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAM 636

Query: 458 LELGVEINVMCCTCLIQCLGKSGRIDDLVRVFNVSVQKGIKPDDRLCGCLLSVLSLCYNS 517
           L  G+  NV  C  L+    +  +I +   +    +  G++P  +    LLS  +   + 
Sbjct: 637 LHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSK 696

Query: 518 EDINKVFTCLQQANPKLVSFINLLQQNDITFEVVK---NEFRNILGETAPEARRPFCNCL 577
            D+      +         F+  +       E V+   N F +++     E++R   + +
Sbjct: 697 LDMGFCGQLMASTGHPAHMFLLKMPAAGPDGENVRNHANNFLDLMHSEDRESKRGLVDAV 756

Query: 578 IDICRNQNLRERAHELLYLGSLYGLYP-GLHNKTETEWCLDVRSLSVGAAQTALEEWMIT 637
           +D       +E A  +  + +   ++P  L  K+ + W +++  +S G A TAL   +  
Sbjct: 757 VDFLHKSGQKEEAGSVWEVAAQKNVFPDALREKSCSYWLINLHVMSEGTAVTALSRTLAW 816

Query: 638 LSKIVQREEALPELLSAQTGAGTHRFSQG---LANSFASHVDKLAAPFQLREDRAGWFVA 697
             K +      P  +   TG G      G   +  +    ++   +PF      +G FV 
Sbjct: 817 FRKQMLASGTCPSRIDIVTGWGRRSRVTGTSMVRQAVEELLNIFGSPFFTESGNSGCFVG 849

Query: 698 TREDLVTWV 700
           + E L  W+
Sbjct: 877 SGEPLNRWL 849

[Close]

BLAST of CSPI03G01850 vs. ExPASy TrEMBL
Match: A0A0A0L6K8 (Smr domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G011820 PE=3 SV=1)

HSP 1 Score: 1423.3 bits (3683), Expect = 0.0e+00
Identity = 710/710 (100.00%), Postives = 710/710 (100.00%), Query Frame = 0


Query: 1   MAVPLSSSLDLKLKPTPIFFTSPLRRKNVTKRLTLLCSSSKSPRKPSSVSSQSVDNKNPS 60
           MAVPLSSSLDLKLKPTPIFFTSPLRRKNVTKRLTLLCSSSKSPRKPSSVSSQSVDNKNPS
Sbjct: 1   MAVPLSSSLDLKLKPTPIFFTSPLRRKNVTKRLTLLCSSSKSPRKPSSVSSQSVDNKNPS 60

Query: 61  LSEQLKNLSTTTLSNAPNDETRLLSKPKSTWVNPTKPKRSVLSLQRQKRSSYSYNPKMRD 120
           LSEQLKNLSTTTLSNAPNDETRLLSKPKSTWVNPTKPKRSVLSLQRQKRSSYSYNPKMRD
Sbjct: 61  LSEQLKNLSTTTLSNAPNDETRLLSKPKSTWVNPTKPKRSVLSLQRQKRSSYSYNPKMRD 120

Query: 121 LKSFAHKLNACDSSDDASFIAALEEIPHPPTKENALLILNSLRPWQKTHLFFNWIKSQNL 180
           LKSFAHKLNACDSSDDASFIAALEEIPHPPTKENALLILNSLRPWQKTHLFFNWIKSQNL
Sbjct: 121 LKSFAHKLNACDSSDDASFIAALEEIPHPPTKENALLILNSLRPWQKTHLFFNWIKSQNL 180

Query: 181 FPMETIFYNVAMKSLRYGRQFQLIEDLANEMISAGIELDNITYSTIITCAKKCSRFDKAM 240
           FPMETIFYNVAMKSLRYGRQFQLIEDLANEMISAGIELDNITYSTIITCAKKCSRFDKAM
Sbjct: 181 FPMETIFYNVAMKSLRYGRQFQLIEDLANEMISAGIELDNITYSTIITCAKKCSRFDKAM 240

Query: 241 EWFERMYKTGLMPDEVTYSAILDVYANLGKVEEVLSLYERGRASGWTPDPYTFSVLGKMF 300
           EWFERMYKTGLMPDEVTYSAILDVYANLGKVEEVLSLYERGRASGWTPDPYTFSVLGKMF
Sbjct: 241 EWFERMYKTGLMPDEVTYSAILDVYANLGKVEEVLSLYERGRASGWTPDPYTFSVLGKMF 300

Query: 301 GEAGDYDGIMYVLQEMKSIEMQPNLVVYNTLLDAMGKAGKPGFARSLFDEMVESGITPNE 360
           GEAGDYDGIMYVLQEMKSIEMQPNLVVYNTLLDAMGKAGKPGFARSLFDEMVESGITPNE
Sbjct: 301 GEAGDYDGIMYVLQEMKSIEMQPNLVVYNTLLDAMGKAGKPGFARSLFDEMVESGITPNE 360

Query: 361 KTLTALVKIYGKARWARDALDLWERMRSNGWPMDFILYNTLLNMCADLGLEEEAETLFEE 420
           KTLTALVKIYGKARWARDALDLWERMRSNGWPMDFILYNTLLNMCADLGLEEEAETLFEE
Sbjct: 361 KTLTALVKIYGKARWARDALDLWERMRSNGWPMDFILYNTLLNMCADLGLEEEAETLFEE 420

Query: 421 MKKSKHSRPDSWSYTAMLNIYGSGGNVKRSMELFEEMLELGVEINVMCCTCLIQCLGKSG 480
           MKKSKHSRPDSWSYTAMLNIYGSGGNVKRSMELFEEMLELGVEINVMCCTCLIQCLGKSG
Sbjct: 421 MKKSKHSRPDSWSYTAMLNIYGSGGNVKRSMELFEEMLELGVEINVMCCTCLIQCLGKSG 480

Query: 481 RIDDLVRVFNVSVQKGIKPDDRLCGCLLSVLSLCYNSEDINKVFTCLQQANPKLVSFINL 540
           RIDDLVRVFNVSVQKGIKPDDRLCGCLLSVLSLCYNSEDINKVFTCLQQANPKLVSFINL
Sbjct: 481 RIDDLVRVFNVSVQKGIKPDDRLCGCLLSVLSLCYNSEDINKVFTCLQQANPKLVSFINL 540

Query: 541 LQQNDITFEVVKNEFRNILGETAPEARRPFCNCLIDICRNQNLRERAHELLYLGSLYGLY 600
           LQQNDITFEVVKNEFRNILGETAPEARRPFCNCLIDICRNQNLRERAHELLYLGSLYGLY
Sbjct: 541 LQQNDITFEVVKNEFRNILGETAPEARRPFCNCLIDICRNQNLRERAHELLYLGSLYGLY 600

Query: 601 PGLHNKTETEWCLDVRSLSVGAAQTALEEWMITLSKIVQREEALPELLSAQTGAGTHRFS 660
           PGLHNKTETEWCLDVRSLSVGAAQTALEEWMITLSKIVQREEALPELLSAQTGAGTHRFS
Sbjct: 601 PGLHNKTETEWCLDVRSLSVGAAQTALEEWMITLSKIVQREEALPELLSAQTGAGTHRFS 660

Query: 661 QGLANSFASHVDKLAAPFQLREDRAGWFVATREDLVTWVHSRVPSVAATA 711
           QGLANSFASHVDKLAAPFQLREDRAGWFVATREDLVTWVHSRVPSVAATA
Sbjct: 661 QGLANSFASHVDKLAAPFQLREDRAGWFVATREDLVTWVHSRVPSVAATA 710

[Close]

BLAST of CSPI03G01850 vs. ExPASy TrEMBL
Match: A0A5A7UFR2 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G001750 PE=3 SV=1)

HSP 1 Score: 1379.4 bits (3569), Expect = 0.0e+00
Identity = 684/710 (96.34%), Postives = 697/710 (98.17%), Query Frame = 0


Query: 1   MAVPLSSSLDLKLKPTPIFFTSPLRRKNVTKRLTLLCSSSKSPRKPSSVSSQSVDNKNPS 60
           MA PLSSSLD KLKPTPIFFTS LRRK V KRLTLLCSSSKSPRKPSS+SS+S+DNKNPS
Sbjct: 1   MAAPLSSSLDFKLKPTPIFFTSLLRRKYVNKRLTLLCSSSKSPRKPSSISSESIDNKNPS 60

Query: 61  LSEQLKNLSTTTLSNAPNDETRLLSKPKSTWVNPTKPKRSVLSLQRQKRSSYSYNPKMRD 120
           LS+QLKNLSTTTLSNAPNDETRLLSKPKSTWVNPTKPKRSVLSLQRQKRSSYSYNPKMRD
Sbjct: 61  LSDQLKNLSTTTLSNAPNDETRLLSKPKSTWVNPTKPKRSVLSLQRQKRSSYSYNPKMRD 120

Query: 121 LKSFAHKLNACDSSDDASFIAALEEIPHPPTKENALLILNSLRPWQKTHLFFNWIKSQNL 180
           LKSFAHKLNACDSSD+ASFIAALEEIPHPPTKENALLILNSLRPWQKTHLFFNWIK+QNL
Sbjct: 121 LKSFAHKLNACDSSDEASFIAALEEIPHPPTKENALLILNSLRPWQKTHLFFNWIKTQNL 180

Query: 181 FPMETIFYNVAMKSLRYGRQFQLIEDLANEMISAGIELDNITYSTIITCAKKCSRFDKAM 240
           FPMETIFYNVAMKSLRYGRQFQLIEDLAN+M+S GIELDNITYSTIITCAKKCSRFDKAM
Sbjct: 181 FPMETIFYNVAMKSLRYGRQFQLIEDLANDMVSTGIELDNITYSTIITCAKKCSRFDKAM 240

Query: 241 EWFERMYKTGLMPDEVTYSAILDVYANLGKVEEVLSLYERGRASGWTPDPYTFSVLGKMF 300
           EWFERMYKTGLMPDEVTYSAILDVYANLGKVEEVLSLYERGRASGW PDPYTFSVLGKMF
Sbjct: 241 EWFERMYKTGLMPDEVTYSAILDVYANLGKVEEVLSLYERGRASGWKPDPYTFSVLGKMF 300

Query: 301 GEAGDYDGIMYVLQEMKSIEMQPNLVVYNTLLDAMGKAGKPGFARSLFDEMVESGITPNE 360
           GEAGDYDGIMYVLQEMKSIEMQPNLVVYNTLLDAMGKAGKPGFARSLFDEMVESGITPNE
Sbjct: 301 GEAGDYDGIMYVLQEMKSIEMQPNLVVYNTLLDAMGKAGKPGFARSLFDEMVESGITPNE 360

Query: 361 KTLTALVKIYGKARWARDALDLWERMRSNGWPMDFILYNTLLNMCADLGLEEEAETLFEE 420
           KTLTALVKIYGKARWARDALDLWERMRSNGWPMDFILYNTLLNMCADLGLEEEAE LFEE
Sbjct: 361 KTLTALVKIYGKARWARDALDLWERMRSNGWPMDFILYNTLLNMCADLGLEEEAEKLFEE 420

Query: 421 MKKSKHSRPDSWSYTAMLNIYGSGGNVKRSMELFEEMLELGVEINVMCCTCLIQCLGKSG 480
           MKKSKHSRPDSWSYTAMLNIYGSGGNVKRSMELFEEML+LGVEINVMCCTCLIQCLGKSG
Sbjct: 421 MKKSKHSRPDSWSYTAMLNIYGSGGNVKRSMELFEEMLKLGVEINVMCCTCLIQCLGKSG 480

Query: 481 RIDDLVRVFNVSVQKGIKPDDRLCGCLLSVLSLCYNSEDINKVFTCLQQANPKLVSFINL 540
           RIDDLVRVFNVSVQKGIKPDDRLCGCLLSV+SLC NSEDINKVFTCLQQANPKLVSF+NL
Sbjct: 481 RIDDLVRVFNVSVQKGIKPDDRLCGCLLSVVSLCDNSEDINKVFTCLQQANPKLVSFVNL 540

Query: 541 LQQNDITFEVVKNEFRNILGETAPEARRPFCNCLIDICRNQNLRERAHELLYLGSLYGLY 600
           LQQN ITFEV+KNEFRNIL ETA EARRPFCNCLIDICRNQNLRERAHELLYLGSLYGLY
Sbjct: 541 LQQNSITFEVIKNEFRNILSETASEARRPFCNCLIDICRNQNLRERAHELLYLGSLYGLY 600

Query: 601 PGLHNKTETEWCLDVRSLSVGAAQTALEEWMITLSKIVQREEALPELLSAQTGAGTHRFS 660
           PGLHNKTETEWCLDVRSLSVGAAQTALEEWMITLSKIVQR+EALPELLSAQTGAGTHRFS
Sbjct: 601 PGLHNKTETEWCLDVRSLSVGAAQTALEEWMITLSKIVQRKEALPELLSAQTGAGTHRFS 660

Query: 661 QGLANSFASHVDKLAAPFQLREDRAGWFVATREDLVTWVHSRVPSVAATA 711
           QGLANSFASHVDKLAAPFQLREDRAGWFVATREDLVTWVHSRVPSV ATA
Sbjct: 661 QGLANSFASHVDKLAAPFQLREDRAGWFVATREDLVTWVHSRVPSVPATA 710

[Close]

BLAST of CSPI03G01850 vs. ExPASy TrEMBL
Match: A0A1S3BKZ1 (pentatricopeptide repeat-containing protein At5g46580, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103490799 PE=3 SV=1)

HSP 1 Score: 1379.4 bits (3569), Expect = 0.0e+00
Identity = 684/710 (96.34%), Postives = 697/710 (98.17%), Query Frame = 0


Query: 1   MAVPLSSSLDLKLKPTPIFFTSPLRRKNVTKRLTLLCSSSKSPRKPSSVSSQSVDNKNPS 60
           MA PLSSSLD KLKPTPIFFTS LRRK V KRLTLLCSSSKSPRKPSS+SS+S+DNKNPS
Sbjct: 1   MAAPLSSSLDFKLKPTPIFFTSLLRRKYVNKRLTLLCSSSKSPRKPSSISSESIDNKNPS 60

Query: 61  LSEQLKNLSTTTLSNAPNDETRLLSKPKSTWVNPTKPKRSVLSLQRQKRSSYSYNPKMRD 120
           LS+QLKNLSTTTLSNAPNDETRLLSKPKSTWVNPTKPKRSVLSLQRQKRSSYSYNPKMRD
Sbjct: 61  LSDQLKNLSTTTLSNAPNDETRLLSKPKSTWVNPTKPKRSVLSLQRQKRSSYSYNPKMRD 120

Query: 121 LKSFAHKLNACDSSDDASFIAALEEIPHPPTKENALLILNSLRPWQKTHLFFNWIKSQNL 180
           LKSFAHKLNACDSSD+ASFIAALEEIPHPPTKENALLILNSLRPWQKTHLFFNWIK+QNL
Sbjct: 121 LKSFAHKLNACDSSDEASFIAALEEIPHPPTKENALLILNSLRPWQKTHLFFNWIKTQNL 180

Query: 181 FPMETIFYNVAMKSLRYGRQFQLIEDLANEMISAGIELDNITYSTIITCAKKCSRFDKAM 240
           FPMETIFYNVAMKSLRYGRQFQLIEDLAN+M+S GIELDNITYSTIITCAKKCSRFDKAM
Sbjct: 181 FPMETIFYNVAMKSLRYGRQFQLIEDLANDMVSTGIELDNITYSTIITCAKKCSRFDKAM 240

Query: 241 EWFERMYKTGLMPDEVTYSAILDVYANLGKVEEVLSLYERGRASGWTPDPYTFSVLGKMF 300
           EWFERMYKTGLMPDEVTYSAILDVYANLGKVEEVLSLYERGRASGW PDPYTFSVLGKMF
Sbjct: 241 EWFERMYKTGLMPDEVTYSAILDVYANLGKVEEVLSLYERGRASGWKPDPYTFSVLGKMF 300

Query: 301 GEAGDYDGIMYVLQEMKSIEMQPNLVVYNTLLDAMGKAGKPGFARSLFDEMVESGITPNE 360
           GEAGDYDGIMYVLQEMKSIEMQPNLVVYNTLLDAMGKAGKPGFARSLFDEMVESGITPNE
Sbjct: 301 GEAGDYDGIMYVLQEMKSIEMQPNLVVYNTLLDAMGKAGKPGFARSLFDEMVESGITPNE 360

Query: 361 KTLTALVKIYGKARWARDALDLWERMRSNGWPMDFILYNTLLNMCADLGLEEEAETLFEE 420
           KTLTALVKIYGKARWARDALDLWERMRSNGWPMDFILYNTLLNMCADLGLEEEAE LFEE
Sbjct: 361 KTLTALVKIYGKARWARDALDLWERMRSNGWPMDFILYNTLLNMCADLGLEEEAEKLFEE 420

Query: 421 MKKSKHSRPDSWSYTAMLNIYGSGGNVKRSMELFEEMLELGVEINVMCCTCLIQCLGKSG 480
           MKKSKHSRPDSWSYTAMLNIYGSGGNVKRSMELFEEML+LGVEINVMCCTCLIQCLGKSG
Sbjct: 421 MKKSKHSRPDSWSYTAMLNIYGSGGNVKRSMELFEEMLKLGVEINVMCCTCLIQCLGKSG 480

Query: 481 RIDDLVRVFNVSVQKGIKPDDRLCGCLLSVLSLCYNSEDINKVFTCLQQANPKLVSFINL 540
           RIDDLVRVFNVSVQKGIKPDDRLCGCLLSV+SLC NSEDINKVFTCLQQANPKLVSF+NL
Sbjct: 481 RIDDLVRVFNVSVQKGIKPDDRLCGCLLSVVSLCDNSEDINKVFTCLQQANPKLVSFVNL 540

Query: 541 LQQNDITFEVVKNEFRNILGETAPEARRPFCNCLIDICRNQNLRERAHELLYLGSLYGLY 600
           LQQN ITFEV+KNEFRNIL ETA EARRPFCNCLIDICRNQNLRERAHELLYLGSLYGLY
Sbjct: 541 LQQNSITFEVIKNEFRNILSETASEARRPFCNCLIDICRNQNLRERAHELLYLGSLYGLY 600

Query: 601 PGLHNKTETEWCLDVRSLSVGAAQTALEEWMITLSKIVQREEALPELLSAQTGAGTHRFS 660
           PGLHNKTETEWCLDVRSLSVGAAQTALEEWMITLSKIVQR+EALPELLSAQTGAGTHRFS
Sbjct: 601 PGLHNKTETEWCLDVRSLSVGAAQTALEEWMITLSKIVQRKEALPELLSAQTGAGTHRFS 660

Query: 661 QGLANSFASHVDKLAAPFQLREDRAGWFVATREDLVTWVHSRVPSVAATA 711
           QGLANSFASHVDKLAAPFQLREDRAGWFVATREDLVTWVHSRVPSV ATA
Sbjct: 661 QGLANSFASHVDKLAAPFQLREDRAGWFVATREDLVTWVHSRVPSVPATA 710

[Close]

BLAST of CSPI03G01850 vs. ExPASy TrEMBL
Match: A0A6J1CW10 (pentatricopeptide repeat-containing protein At5g46580, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111014808 PE=3 SV=1)

HSP 1 Score: 1280.4 bits (3312), Expect = 0.0e+00
Identity = 641/697 (91.97%), Postives = 671/697 (96.27%), Query Frame = 0


Query: 14  KPTPIFFTSPLRRKNVTKRLTLLCSSSKSPRKPSSVSSQSVDNKNPSLSEQLKNLSTTTL 73
           KP+P+FFTSPLRRKN TKRLT+LCSSSKSPRK    SSQS ++KNPSLS+QLKNLSTTTL
Sbjct: 21  KPSPMFFTSPLRRKNFTKRLTVLCSSSKSPRKSPQTSSQS-NHKNPSLSDQLKNLSTTTL 80

Query: 74  SNAP-NDETRLLSKPKSTWVNPTKPKRSVLSLQRQKRSSYSYNPKMRDLKSFAHKLNACD 133
           S +P +DE+ LLSKPKSTWVNPTKPKRSVLSLQRQKRSSYSYNPKMR+LKSFA KLNACD
Sbjct: 81  STSPKDDESHLLSKPKSTWVNPTKPKRSVLSLQRQKRSSYSYNPKMRELKSFAQKLNACD 140

Query: 134 SSDDASFIAALEEIPHPPTKENALLILNSLRPWQKTHLFFNWIKSQNLFPMETIFYNVAM 193
           SS+ A F+AALEEIPHPPTKENALLILNSL+PWQKT +FFNWIKSQNLFPMETIFYNVAM
Sbjct: 141 SSESA-FVAALEEIPHPPTKENALLILNSLKPWQKTQMFFNWIKSQNLFPMETIFYNVAM 200

Query: 194 KSLRYGRQFQLIEDLANEMISAGIELDNITYSTIITCAKKCSRFDKAMEWFERMYKTGLM 253
           KSLRYGRQFQ+IEDLANEMIS+GIELDNITYSTIITCAKKCSRFDKAMEWFERMYKTGLM
Sbjct: 201 KSLRYGRQFQVIEDLANEMISSGIELDNITYSTIITCAKKCSRFDKAMEWFERMYKTGLM 260

Query: 254 PDEVTYSAILDVYANLGKVEEVLSLYERGRASGWTPDPYTFSVLGKMFGEAGDYDGIMYV 313
           PDEVTYSAILDVYANLGKVEEVLSLYERGRASGW PDP TFSVLGKMFGEAGDYDGIMYV
Sbjct: 261 PDEVTYSAILDVYANLGKVEEVLSLYERGRASGWKPDPVTFSVLGKMFGEAGDYDGIMYV 320

Query: 314 LQEMKSIEMQPNLVVYNTLLDAMGKAGKPGFARSLFDEMVESGITPNEKTLTALVKIYGK 373
           LQEMKSIE+QPNLVVYNTLLDAMGKAGKPGFARSLFDEM+ESGITPNEKTLTALVKIYGK
Sbjct: 321 LQEMKSIEVQPNLVVYNTLLDAMGKAGKPGFARSLFDEMIESGITPNEKTLTALVKIYGK 380

Query: 374 ARWARDALDLWERMRSNGWPMDFILYNTLLNMCADLGLEEEAETLFEEMKKSKHSRPDSW 433
           ARWARDAL LWERMRSNGWPMDFILYNTLLNMCADLGLEEEAE LFEEMKKS++SRPDSW
Sbjct: 381 ARWARDALYLWERMRSNGWPMDFILYNTLLNMCADLGLEEEAEKLFEEMKKSENSRPDSW 440

Query: 434 SYTAMLNIYGSGGNVKRSMELFEEMLELGVEINVMCCTCLIQCLGKSGRIDDLVRVFNVS 493
           SYTAMLNI+GSGGNVKRSMELFEEMLELGVEINVM CTCLIQCLGK+ RIDDLVRVF+VS
Sbjct: 441 SYTAMLNIHGSGGNVKRSMELFEEMLELGVEINVMGCTCLIQCLGKARRIDDLVRVFDVS 500

Query: 494 VQKGIKPDDRLCGCLLSVLSLCYNSEDINKVFTCLQQANPKLVSFINLLQQNDITFEVVK 553
           VQKGIKPDDRLCGCLLSV+SLC NSEDINKVFTCLQQANP LV+FINLLQQN ITFEVVK
Sbjct: 501 VQKGIKPDDRLCGCLLSVVSLCDNSEDINKVFTCLQQANPNLVAFINLLQQNVITFEVVK 560

Query: 554 NEFRNILGETAPEARRPFCNCLIDICRNQNLRERAHELLYLGSLYGLYPGLHNKTETEWC 613
            EFR ILGETA EARRPFCNCLIDICRNQNLRERAHELLYLGSLYGLYPGLHNKTE+EWC
Sbjct: 561 EEFRKILGETATEARRPFCNCLIDICRNQNLRERAHELLYLGSLYGLYPGLHNKTESEWC 620

Query: 614 LDVRSLSVGAAQTALEEWMITLSKIVQREEALPELLSAQTGAGTHRFSQGLANSFASHVD 673
           LDVRSLSVGAAQTALEEWM TLSKIVQREEALP+LLSAQTGAGTHRFSQGLANSFASHV+
Sbjct: 621 LDVRSLSVGAAQTALEEWMTTLSKIVQREEALPQLLSAQTGAGTHRFSQGLANSFASHVE 680

Query: 674 KLAAPFQLREDRAGWFVATREDLVTWVHSRVPSVAAT 710
           KLAAPF+LREDRAGWFVATREDLV+WVHSRVPSVAAT
Sbjct: 681 KLAAPFRLREDRAGWFVATREDLVSWVHSRVPSVAAT 715

[Close]

BLAST of CSPI03G01850 vs. ExPASy TrEMBL
Match: A0A6J1L5S8 (pentatricopeptide repeat-containing protein At5g46580, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111500252 PE=3 SV=1)

HSP 1 Score: 1269.2 bits (3283), Expect = 0.0e+00
Identity = 633/715 (88.53%), Postives = 670/715 (93.71%), Query Frame = 0


Query: 1   MAVPLSSSLD----LKLKPT-PIFFTSPLRRKNVTKRLTLLCSSSKSPRKPSSVSSQSVD 60
           MA PLSSSLD    LKLKPT P+FFTSPLRR N TKRLT+LC+SSKSPR        S D
Sbjct: 1   MAAPLSSSLDIKLRLKLKPTPPLFFTSPLRRNNFTKRLTVLCTSSKSPR--------STD 60

Query: 61  NKNPSLSEQLKNLSTTTLSNAPNDETRLLSKPKSTWVNPTKPKRSVLSLQRQKRSSYSYN 120
            KN SLSEQLK+LST TLSNA NDE+ LLS PKS WVNPTKPKRSVLSLQRQKRSSYSYN
Sbjct: 61  KKNSSLSEQLKDLSTCTLSNASNDESHLLSNPKSIWVNPTKPKRSVLSLQRQKRSSYSYN 120

Query: 121 PKMRDLKSFAHKLNACDSSDDASFIAALEEIPHPPTKENALLILNSLRPWQKTHLFFNWI 180
           PKMR+LK+FAHKLNA D S +A+F+A L+EIPHPPTKENALLILNSL+PWQKTHLFFNWI
Sbjct: 121 PKMRELKTFAHKLNASDFS-EAAFMAVLKEIPHPPTKENALLILNSLKPWQKTHLFFNWI 180

Query: 181 KSQNLFPMETIFYNVAMKSLRYGRQFQLIEDLANEMISAGIELDNITYSTIITCAKKCSR 240
           K+QNLFPMETIFYNVAMKSLRYGRQFQLIE+LANEMI+ GIELDNITYSTIITCAKKCSR
Sbjct: 181 KTQNLFPMETIFYNVAMKSLRYGRQFQLIEELANEMINTGIELDNITYSTIITCAKKCSR 240

Query: 241 FDKAMEWFERMYKTGLMPDEVTYSAILDVYANLGKVEEVLSLYERGRASGWTPDPYTFSV 300
           FDKAMEWFERMY+TGLMPDEVTYSAILDVYANLGKVEE LSLYERGRASGW PDPYTFSV
Sbjct: 241 FDKAMEWFERMYRTGLMPDEVTYSAILDVYANLGKVEEALSLYERGRASGWKPDPYTFSV 300

Query: 301 LGKMFGEAGDYDGIMYVLQEMKSIEMQPNLVVYNTLLDAMGKAGKPGFARSLFDEMVESG 360
           LGKMFGEAGDYDGIMYVLQEMKSIE+QPNLVVYNT+LDAMGKAG+PGFARSLF+EM+ESG
Sbjct: 301 LGKMFGEAGDYDGIMYVLQEMKSIEVQPNLVVYNTMLDAMGKAGRPGFARSLFEEMIESG 360

Query: 361 ITPNEKTLTALVKIYGKARWARDALDLWERMRSNGWPMDFILYNTLLNMCADLGLEEEAE 420
           ITPNEKTLTALVKIYGKARWARDALDLWERMRS GWPMDFILYNTLLNMCADLGLEEEAE
Sbjct: 361 ITPNEKTLTALVKIYGKARWARDALDLWERMRSKGWPMDFILYNTLLNMCADLGLEEEAE 420

Query: 421 TLFEEMKKSKHSRPDSWSYTAMLNIYGSGGNVKRSMELFEEMLELGVEINVMCCTCLIQC 480
            LFEEMKKS+HSRPDSWSYTAMLNI+GSGGNVKRSMELFEEMLELGV INVMCCTCLIQC
Sbjct: 421 KLFEEMKKSEHSRPDSWSYTAMLNIHGSGGNVKRSMELFEEMLELGVGINVMCCTCLIQC 480

Query: 481 LGKSGRIDDLVRVFNVSVQKGIKPDDRLCGCLLSVLSLCYNSEDINKVFTCLQQANPKLV 540
           LGK+ RIDDLVRVF+VSV+KG+KPDDRLCGCLLSV+SLC N+EDI+KVFTCLQQANPKLV
Sbjct: 481 LGKARRIDDLVRVFDVSVRKGVKPDDRLCGCLLSVVSLCDNNEDISKVFTCLQQANPKLV 540

Query: 541 SFINLLQQNDITFEVVKNEFRNILGETAPEARRPFCNCLIDICRNQNLRERAHELLYLGS 600
            F+NLLQQNDITF+V+K+EFR ILGET  EARRPFCNCLIDICRNQNL +RAHELLYLGS
Sbjct: 541 EFVNLLQQNDITFDVIKDEFRTILGETTTEARRPFCNCLIDICRNQNLSKRAHELLYLGS 600

Query: 601 LYGLYPGLHNKTETEWCLDVRSLSVGAAQTALEEWMITLSKIVQREEALPELLSAQTGAG 660
           LYGLYPGLHNKTE EWCLDVRSLSVGAAQTALEEWMITLSKIVQREEALPELLSAQTGAG
Sbjct: 601 LYGLYPGLHNKTEGEWCLDVRSLSVGAAQTALEEWMITLSKIVQREEALPELLSAQTGAG 660

Query: 661 THRFSQGLANSFASHVDKLAAPFQLREDRAGWFVATREDLVTWVHSRVPSVAATA 711
           THRFSQGLANSFASHV+KLAAPF+LREDRAGWFVATRED V WVHSRVPSVA TA
Sbjct: 661 THRFSQGLANSFASHVEKLAAPFRLREDRAGWFVATREDFVAWVHSRVPSVATTA 706

[Close]

BLAST of CSPI03G01850 vs. NCBI nr
Match: XP_004148730.1 (pentatricopeptide repeat-containing protein At5g46580, chloroplastic [Cucumis sativus] >KGN55781.1 hypothetical protein Csa_011464 [Cucumis sativus])

HSP 1 Score: 1423.3 bits (3683), Expect = 0.0e+00
Identity = 710/710 (100.00%), Postives = 710/710 (100.00%), Query Frame = 0


Query: 1   MAVPLSSSLDLKLKPTPIFFTSPLRRKNVTKRLTLLCSSSKSPRKPSSVSSQSVDNKNPS 60
           MAVPLSSSLDLKLKPTPIFFTSPLRRKNVTKRLTLLCSSSKSPRKPSSVSSQSVDNKNPS
Sbjct: 1   MAVPLSSSLDLKLKPTPIFFTSPLRRKNVTKRLTLLCSSSKSPRKPSSVSSQSVDNKNPS 60

Query: 61  LSEQLKNLSTTTLSNAPNDETRLLSKPKSTWVNPTKPKRSVLSLQRQKRSSYSYNPKMRD 120
           LSEQLKNLSTTTLSNAPNDETRLLSKPKSTWVNPTKPKRSVLSLQRQKRSSYSYNPKMRD
Sbjct: 61  LSEQLKNLSTTTLSNAPNDETRLLSKPKSTWVNPTKPKRSVLSLQRQKRSSYSYNPKMRD 120

Query: 121 LKSFAHKLNACDSSDDASFIAALEEIPHPPTKENALLILNSLRPWQKTHLFFNWIKSQNL 180
           LKSFAHKLNACDSSDDASFIAALEEIPHPPTKENALLILNSLRPWQKTHLFFNWIKSQNL
Sbjct: 121 LKSFAHKLNACDSSDDASFIAALEEIPHPPTKENALLILNSLRPWQKTHLFFNWIKSQNL 180

Query: 181 FPMETIFYNVAMKSLRYGRQFQLIEDLANEMISAGIELDNITYSTIITCAKKCSRFDKAM 240
           FPMETIFYNVAMKSLRYGRQFQLIEDLANEMISAGIELDNITYSTIITCAKKCSRFDKAM
Sbjct: 181 FPMETIFYNVAMKSLRYGRQFQLIEDLANEMISAGIELDNITYSTIITCAKKCSRFDKAM 240

Query: 241 EWFERMYKTGLMPDEVTYSAILDVYANLGKVEEVLSLYERGRASGWTPDPYTFSVLGKMF 300
           EWFERMYKTGLMPDEVTYSAILDVYANLGKVEEVLSLYERGRASGWTPDPYTFSVLGKMF
Sbjct: 241 EWFERMYKTGLMPDEVTYSAILDVYANLGKVEEVLSLYERGRASGWTPDPYTFSVLGKMF 300

Query: 301 GEAGDYDGIMYVLQEMKSIEMQPNLVVYNTLLDAMGKAGKPGFARSLFDEMVESGITPNE 360
           GEAGDYDGIMYVLQEMKSIEMQPNLVVYNTLLDAMGKAGKPGFARSLFDEMVESGITPNE
Sbjct: 301 GEAGDYDGIMYVLQEMKSIEMQPNLVVYNTLLDAMGKAGKPGFARSLFDEMVESGITPNE 360

Query: 361 KTLTALVKIYGKARWARDALDLWERMRSNGWPMDFILYNTLLNMCADLGLEEEAETLFEE 420
           KTLTALVKIYGKARWARDALDLWERMRSNGWPMDFILYNTLLNMCADLGLEEEAETLFEE
Sbjct: 361 KTLTALVKIYGKARWARDALDLWERMRSNGWPMDFILYNTLLNMCADLGLEEEAETLFEE 420

Query: 421 MKKSKHSRPDSWSYTAMLNIYGSGGNVKRSMELFEEMLELGVEINVMCCTCLIQCLGKSG 480
           MKKSKHSRPDSWSYTAMLNIYGSGGNVKRSMELFEEMLELGVEINVMCCTCLIQCLGKSG
Sbjct: 421 MKKSKHSRPDSWSYTAMLNIYGSGGNVKRSMELFEEMLELGVEINVMCCTCLIQCLGKSG 480

Query: 481 RIDDLVRVFNVSVQKGIKPDDRLCGCLLSVLSLCYNSEDINKVFTCLQQANPKLVSFINL 540
           RIDDLVRVFNVSVQKGIKPDDRLCGCLLSVLSLCYNSEDINKVFTCLQQANPKLVSFINL
Sbjct: 481 RIDDLVRVFNVSVQKGIKPDDRLCGCLLSVLSLCYNSEDINKVFTCLQQANPKLVSFINL 540

Query: 541 LQQNDITFEVVKNEFRNILGETAPEARRPFCNCLIDICRNQNLRERAHELLYLGSLYGLY 600
           LQQNDITFEVVKNEFRNILGETAPEARRPFCNCLIDICRNQNLRERAHELLYLGSLYGLY
Sbjct: 541 LQQNDITFEVVKNEFRNILGETAPEARRPFCNCLIDICRNQNLRERAHELLYLGSLYGLY 600

Query: 601 PGLHNKTETEWCLDVRSLSVGAAQTALEEWMITLSKIVQREEALPELLSAQTGAGTHRFS 660
           PGLHNKTETEWCLDVRSLSVGAAQTALEEWMITLSKIVQREEALPELLSAQTGAGTHRFS
Sbjct: 601 PGLHNKTETEWCLDVRSLSVGAAQTALEEWMITLSKIVQREEALPELLSAQTGAGTHRFS 660

Query: 661 QGLANSFASHVDKLAAPFQLREDRAGWFVATREDLVTWVHSRVPSVAATA 711
           QGLANSFASHVDKLAAPFQLREDRAGWFVATREDLVTWVHSRVPSVAATA
Sbjct: 661 QGLANSFASHVDKLAAPFQLREDRAGWFVATREDLVTWVHSRVPSVAATA 710

[Close]

BLAST of CSPI03G01850 vs. NCBI nr
Match: XP_008448710.1 (PREDICTED: pentatricopeptide repeat-containing protein At5g46580, chloroplastic [Cucumis melo] >KAA0053056.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK11511.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 1379.4 bits (3569), Expect = 0.0e+00
Identity = 684/710 (96.34%), Postives = 697/710 (98.17%), Query Frame = 0


Query: 1   MAVPLSSSLDLKLKPTPIFFTSPLRRKNVTKRLTLLCSSSKSPRKPSSVSSQSVDNKNPS 60
           MA PLSSSLD KLKPTPIFFTS LRRK V KRLTLLCSSSKSPRKPSS+SS+S+DNKNPS
Sbjct: 1   MAAPLSSSLDFKLKPTPIFFTSLLRRKYVNKRLTLLCSSSKSPRKPSSISSESIDNKNPS 60

Query: 61  LSEQLKNLSTTTLSNAPNDETRLLSKPKSTWVNPTKPKRSVLSLQRQKRSSYSYNPKMRD 120
           LS+QLKNLSTTTLSNAPNDETRLLSKPKSTWVNPTKPKRSVLSLQRQKRSSYSYNPKMRD
Sbjct: 61  LSDQLKNLSTTTLSNAPNDETRLLSKPKSTWVNPTKPKRSVLSLQRQKRSSYSYNPKMRD 120

Query: 121 LKSFAHKLNACDSSDDASFIAALEEIPHPPTKENALLILNSLRPWQKTHLFFNWIKSQNL 180
           LKSFAHKLNACDSSD+ASFIAALEEIPHPPTKENALLILNSLRPWQKTHLFFNWIK+QNL
Sbjct: 121 LKSFAHKLNACDSSDEASFIAALEEIPHPPTKENALLILNSLRPWQKTHLFFNWIKTQNL 180

Query: 181 FPMETIFYNVAMKSLRYGRQFQLIEDLANEMISAGIELDNITYSTIITCAKKCSRFDKAM 240
           FPMETIFYNVAMKSLRYGRQFQLIEDLAN+M+S GIELDNITYSTIITCAKKCSRFDKAM
Sbjct: 181 FPMETIFYNVAMKSLRYGRQFQLIEDLANDMVSTGIELDNITYSTIITCAKKCSRFDKAM 240

Query: 241 EWFERMYKTGLMPDEVTYSAILDVYANLGKVEEVLSLYERGRASGWTPDPYTFSVLGKMF 300
           EWFERMYKTGLMPDEVTYSAILDVYANLGKVEEVLSLYERGRASGW PDPYTFSVLGKMF
Sbjct: 241 EWFERMYKTGLMPDEVTYSAILDVYANLGKVEEVLSLYERGRASGWKPDPYTFSVLGKMF 300

Query: 301 GEAGDYDGIMYVLQEMKSIEMQPNLVVYNTLLDAMGKAGKPGFARSLFDEMVESGITPNE 360
           GEAGDYDGIMYVLQEMKSIEMQPNLVVYNTLLDAMGKAGKPGFARSLFDEMVESGITPNE
Sbjct: 301 GEAGDYDGIMYVLQEMKSIEMQPNLVVYNTLLDAMGKAGKPGFARSLFDEMVESGITPNE 360

Query: 361 KTLTALVKIYGKARWARDALDLWERMRSNGWPMDFILYNTLLNMCADLGLEEEAETLFEE 420
           KTLTALVKIYGKARWARDALDLWERMRSNGWPMDFILYNTLLNMCADLGLEEEAE LFEE
Sbjct: 361 KTLTALVKIYGKARWARDALDLWERMRSNGWPMDFILYNTLLNMCADLGLEEEAEKLFEE 420

Query: 421 MKKSKHSRPDSWSYTAMLNIYGSGGNVKRSMELFEEMLELGVEINVMCCTCLIQCLGKSG 480
           MKKSKHSRPDSWSYTAMLNIYGSGGNVKRSMELFEEML+LGVEINVMCCTCLIQCLGKSG
Sbjct: 421 MKKSKHSRPDSWSYTAMLNIYGSGGNVKRSMELFEEMLKLGVEINVMCCTCLIQCLGKSG 480

Query: 481 RIDDLVRVFNVSVQKGIKPDDRLCGCLLSVLSLCYNSEDINKVFTCLQQANPKLVSFINL 540
           RIDDLVRVFNVSVQKGIKPDDRLCGCLLSV+SLC NSEDINKVFTCLQQANPKLVSF+NL
Sbjct: 481 RIDDLVRVFNVSVQKGIKPDDRLCGCLLSVVSLCDNSEDINKVFTCLQQANPKLVSFVNL 540

Query: 541 LQQNDITFEVVKNEFRNILGETAPEARRPFCNCLIDICRNQNLRERAHELLYLGSLYGLY 600
           LQQN ITFEV+KNEFRNIL ETA EARRPFCNCLIDICRNQNLRERAHELLYLGSLYGLY
Sbjct: 541 LQQNSITFEVIKNEFRNILSETASEARRPFCNCLIDICRNQNLRERAHELLYLGSLYGLY 600

Query: 601 PGLHNKTETEWCLDVRSLSVGAAQTALEEWMITLSKIVQREEALPELLSAQTGAGTHRFS 660
           PGLHNKTETEWCLDVRSLSVGAAQTALEEWMITLSKIVQR+EALPELLSAQTGAGTHRFS
Sbjct: 601 PGLHNKTETEWCLDVRSLSVGAAQTALEEWMITLSKIVQRKEALPELLSAQTGAGTHRFS 660

Query: 661 QGLANSFASHVDKLAAPFQLREDRAGWFVATREDLVTWVHSRVPSVAATA 711
           QGLANSFASHVDKLAAPFQLREDRAGWFVATREDLVTWVHSRVPSV ATA
Sbjct: 661 QGLANSFASHVDKLAAPFQLREDRAGWFVATREDLVTWVHSRVPSVPATA 710

[Close]

BLAST of CSPI03G01850 vs. NCBI nr
Match: XP_038906217.1 (pentatricopeptide repeat-containing protein At5g46580, chloroplastic [Benincasa hispida])

HSP 1 Score: 1355.5 bits (3507), Expect = 0.0e+00
Identity = 670/710 (94.37%), Postives = 695/710 (97.89%), Query Frame = 0


Query: 1   MAVPLSSSLDLKLKPTPIFFTSPLRRKNVTKRLTLLCSSSKSPRKPSSVSSQSVDNKNPS 60
           MA PLSSSLDL LKPT  FFTSPLRRKN TKRLT++C+SSK PRK S +SS+S+DNKNPS
Sbjct: 1   MAAPLSSSLDLNLKPT--FFTSPLRRKNFTKRLTVICTSSKPPRKASPISSESIDNKNPS 60

Query: 61  LSEQLKNLSTTTLSNAPNDETRLLSKPKSTWVNPTKPKRSVLSLQRQKRSSYSYNPKMRD 120
           LSEQLKNLSTTTLSNAPNDE+ LLSKPKSTWVNPTKPKRSVLSLQRQKRSSYSYNPKMRD
Sbjct: 61  LSEQLKNLSTTTLSNAPNDESHLLSKPKSTWVNPTKPKRSVLSLQRQKRSSYSYNPKMRD 120

Query: 121 LKSFAHKLNACDSSDDASFIAALEEIPHPPTKENALLILNSLRPWQKTHLFFNWIKSQNL 180
           LKSFAHKLNACDSSD+A+F+AALEEIPHPPTKENALL+LNSLRPWQKTHLFFNWIK+QNL
Sbjct: 121 LKSFAHKLNACDSSDEAAFMAALEEIPHPPTKENALLVLNSLRPWQKTHLFFNWIKTQNL 180

Query: 181 FPMETIFYNVAMKSLRYGRQFQLIEDLANEMISAGIELDNITYSTIITCAKKCSRFDKAM 240
           FPMETIFYNVAMKSLRYGRQFQL+EDLANEMIS GIELDNITYSTIITCAKKCSRFDKA+
Sbjct: 181 FPMETIFYNVAMKSLRYGRQFQLVEDLANEMISTGIELDNITYSTIITCAKKCSRFDKAV 240

Query: 241 EWFERMYKTGLMPDEVTYSAILDVYANLGKVEEVLSLYERGRASGWTPDPYTFSVLGKMF 300
           EWFERMYKTGLMPDEVTYSAILDVYANLGKVEEVLSLYERGRASGW PDP+TFSVLGKMF
Sbjct: 241 EWFERMYKTGLMPDEVTYSAILDVYANLGKVEEVLSLYERGRASGWKPDPFTFSVLGKMF 300

Query: 301 GEAGDYDGIMYVLQEMKSIEMQPNLVVYNTLLDAMGKAGKPGFARSLFDEMVESGITPNE 360
           GEAGDYDGIMYVLQEMKSIE+QPNLVVYNTLLDAMGKAGKPGFARSLFDEMVESGITPNE
Sbjct: 301 GEAGDYDGIMYVLQEMKSIEVQPNLVVYNTLLDAMGKAGKPGFARSLFDEMVESGITPNE 360

Query: 361 KTLTALVKIYGKARWARDALDLWERMRSNGWPMDFILYNTLLNMCADLGLEEEAETLFEE 420
           KTLTALVKIYGKARWARDALDLWERMRSNGWPMDFILYNTLLNMCADLGLEEEAE LFEE
Sbjct: 361 KTLTALVKIYGKARWARDALDLWERMRSNGWPMDFILYNTLLNMCADLGLEEEAEKLFEE 420

Query: 421 MKKSKHSRPDSWSYTAMLNIYGSGGNVKRSMELFEEMLELGVEINVMCCTCLIQCLGKSG 480
           MKKS+HSRPDSWSYTAMLNI+GSGGNVKRSMELFEEML+LGVEINVMCCTCLIQCLGKSG
Sbjct: 421 MKKSEHSRPDSWSYTAMLNIHGSGGNVKRSMELFEEMLKLGVEINVMCCTCLIQCLGKSG 480

Query: 481 RIDDLVRVFNVSVQKGIKPDDRLCGCLLSVLSLCYNSEDINKVFTCLQQANPKLVSFINL 540
           RID+LVRVFNVSVQKGIKPDDRLCGCLLSV+SLC NSEDINKVFTCLQQA+PKLV+F+NL
Sbjct: 481 RIDELVRVFNVSVQKGIKPDDRLCGCLLSVVSLCDNSEDINKVFTCLQQADPKLVAFVNL 540

Query: 541 LQQNDITFEVVKNEFRNILGETAPEARRPFCNCLIDICRNQNLRERAHELLYLGSLYGLY 600
           LQQNDITFEVVKNEFRNILGETA EARRPFCNCLIDICRNQNLRERAHELLYLGSLYGLY
Sbjct: 541 LQQNDITFEVVKNEFRNILGETATEARRPFCNCLIDICRNQNLRERAHELLYLGSLYGLY 600

Query: 601 PGLHNKTETEWCLDVRSLSVGAAQTALEEWMITLSKIVQREEALPELLSAQTGAGTHRFS 660
           PGLHNKTE EWCLDVRSLSVGAAQTALEEWMITLSKIVQREEALPELLSAQTGAGTH+FS
Sbjct: 601 PGLHNKTEAEWCLDVRSLSVGAAQTALEEWMITLSKIVQREEALPELLSAQTGAGTHKFS 660

Query: 661 QGLANSFASHVDKLAAPFQLREDRAGWFVATREDLVTWVHSRVPSVAATA 711
           QGLANSFASHVDKLAAPFQLREDRAGWFVATREDLVTWVHSRVPSVAATA
Sbjct: 661 QGLANSFASHVDKLAAPFQLREDRAGWFVATREDLVTWVHSRVPSVAATA 708

[Close]

BLAST of CSPI03G01850 vs. NCBI nr
Match: XP_022145326.1 (pentatricopeptide repeat-containing protein At5g46580, chloroplastic [Momordica charantia])

HSP 1 Score: 1280.4 bits (3312), Expect = 0.0e+00
Identity = 641/697 (91.97%), Postives = 671/697 (96.27%), Query Frame = 0


Query: 14  KPTPIFFTSPLRRKNVTKRLTLLCSSSKSPRKPSSVSSQSVDNKNPSLSEQLKNLSTTTL 73
           KP+P+FFTSPLRRKN TKRLT+LCSSSKSPRK    SSQS ++KNPSLS+QLKNLSTTTL
Sbjct: 21  KPSPMFFTSPLRRKNFTKRLTVLCSSSKSPRKSPQTSSQS-NHKNPSLSDQLKNLSTTTL 80

Query: 74  SNAP-NDETRLLSKPKSTWVNPTKPKRSVLSLQRQKRSSYSYNPKMRDLKSFAHKLNACD 133
           S +P +DE+ LLSKPKSTWVNPTKPKRSVLSLQRQKRSSYSYNPKMR+LKSFA KLNACD
Sbjct: 81  STSPKDDESHLLSKPKSTWVNPTKPKRSVLSLQRQKRSSYSYNPKMRELKSFAQKLNACD 140

Query: 134 SSDDASFIAALEEIPHPPTKENALLILNSLRPWQKTHLFFNWIKSQNLFPMETIFYNVAM 193
           SS+ A F+AALEEIPHPPTKENALLILNSL+PWQKT +FFNWIKSQNLFPMETIFYNVAM
Sbjct: 141 SSESA-FVAALEEIPHPPTKENALLILNSLKPWQKTQMFFNWIKSQNLFPMETIFYNVAM 200

Query: 194 KSLRYGRQFQLIEDLANEMISAGIELDNITYSTIITCAKKCSRFDKAMEWFERMYKTGLM 253
           KSLRYGRQFQ+IEDLANEMIS+GIELDNITYSTIITCAKKCSRFDKAMEWFERMYKTGLM
Sbjct: 201 KSLRYGRQFQVIEDLANEMISSGIELDNITYSTIITCAKKCSRFDKAMEWFERMYKTGLM 260

Query: 254 PDEVTYSAILDVYANLGKVEEVLSLYERGRASGWTPDPYTFSVLGKMFGEAGDYDGIMYV 313
           PDEVTYSAILDVYANLGKVEEVLSLYERGRASGW PDP TFSVLGKMFGEAGDYDGIMYV
Sbjct: 261 PDEVTYSAILDVYANLGKVEEVLSLYERGRASGWKPDPVTFSVLGKMFGEAGDYDGIMYV 320

Query: 314 LQEMKSIEMQPNLVVYNTLLDAMGKAGKPGFARSLFDEMVESGITPNEKTLTALVKIYGK 373
           LQEMKSIE+QPNLVVYNTLLDAMGKAGKPGFARSLFDEM+ESGITPNEKTLTALVKIYGK
Sbjct: 321 LQEMKSIEVQPNLVVYNTLLDAMGKAGKPGFARSLFDEMIESGITPNEKTLTALVKIYGK 380

Query: 374 ARWARDALDLWERMRSNGWPMDFILYNTLLNMCADLGLEEEAETLFEEMKKSKHSRPDSW 433
           ARWARDAL LWERMRSNGWPMDFILYNTLLNMCADLGLEEEAE LFEEMKKS++SRPDSW
Sbjct: 381 ARWARDALYLWERMRSNGWPMDFILYNTLLNMCADLGLEEEAEKLFEEMKKSENSRPDSW 440

Query: 434 SYTAMLNIYGSGGNVKRSMELFEEMLELGVEINVMCCTCLIQCLGKSGRIDDLVRVFNVS 493
           SYTAMLNI+GSGGNVKRSMELFEEMLELGVEINVM CTCLIQCLGK+ RIDDLVRVF+VS
Sbjct: 441 SYTAMLNIHGSGGNVKRSMELFEEMLELGVEINVMGCTCLIQCLGKARRIDDLVRVFDVS 500

Query: 494 VQKGIKPDDRLCGCLLSVLSLCYNSEDINKVFTCLQQANPKLVSFINLLQQNDITFEVVK 553
           VQKGIKPDDRLCGCLLSV+SLC NSEDINKVFTCLQQANP LV+FINLLQQN ITFEVVK
Sbjct: 501 VQKGIKPDDRLCGCLLSVVSLCDNSEDINKVFTCLQQANPNLVAFINLLQQNVITFEVVK 560

Query: 554 NEFRNILGETAPEARRPFCNCLIDICRNQNLRERAHELLYLGSLYGLYPGLHNKTETEWC 613
            EFR ILGETA EARRPFCNCLIDICRNQNLRERAHELLYLGSLYGLYPGLHNKTE+EWC
Sbjct: 561 EEFRKILGETATEARRPFCNCLIDICRNQNLRERAHELLYLGSLYGLYPGLHNKTESEWC 620

Query: 614 LDVRSLSVGAAQTALEEWMITLSKIVQREEALPELLSAQTGAGTHRFSQGLANSFASHVD 673
           LDVRSLSVGAAQTALEEWM TLSKIVQREEALP+LLSAQTGAGTHRFSQGLANSFASHV+
Sbjct: 621 LDVRSLSVGAAQTALEEWMTTLSKIVQREEALPQLLSAQTGAGTHRFSQGLANSFASHVE 680

Query: 674 KLAAPFQLREDRAGWFVATREDLVTWVHSRVPSVAAT 710
           KLAAPF+LREDRAGWFVATREDLV+WVHSRVPSVAAT
Sbjct: 681 KLAAPFRLREDRAGWFVATREDLVSWVHSRVPSVAAT 715

[Close]

BLAST of CSPI03G01850 vs. NCBI nr
Match: KAG6577624.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1272.7 bits (3292), Expect = 0.0e+00
Identity = 634/713 (88.92%), Postives = 673/713 (94.39%), Query Frame = 0


Query: 1   MAVPLSSSLD--LKLKPT-PIFFTSPLRRKNVTKRLTLLCSSSKSPRKPSSVSSQSVDNK 60
           MA PLSSSLD  LKLKPT P+FFTSPLRR N TKRLT+LC+SSKSPR        S D K
Sbjct: 1   MAAPLSSSLDIKLKLKPTPPLFFTSPLRRNNFTKRLTVLCTSSKSPR--------STDKK 60

Query: 61  NPSLSEQLKNLSTTTLSNAPNDETRLLSKPKSTWVNPTKPKRSVLSLQRQKRSSYSYNPK 120
           NPSLSEQLK+LST+TLSNA NDE+ LLS PKS WVNPTKPKRSVLSLQRQKRSSYSYNPK
Sbjct: 61  NPSLSEQLKDLSTSTLSNASNDESHLLSNPKSIWVNPTKPKRSVLSLQRQKRSSYSYNPK 120

Query: 121 MRDLKSFAHKLNACDSSDDASFIAALEEIPHPPTKENALLILNSLRPWQKTHLFFNWIKS 180
           MR+LK+FAHKLNA DSS +A+F+A L+EIPHPPTKENALLILNSL+PWQKTHLFFNWIK+
Sbjct: 121 MRELKTFAHKLNASDSS-EAAFMAVLKEIPHPPTKENALLILNSLKPWQKTHLFFNWIKT 180

Query: 181 QNLFPMETIFYNVAMKSLRYGRQFQLIEDLANEMISAGIELDNITYSTIITCAKKCSRFD 240
           QNLFPMETIFYNVAMKSLRYGRQFQLIE+LANEMI+ GIELDNITYSTIITCAKKCSRFD
Sbjct: 181 QNLFPMETIFYNVAMKSLRYGRQFQLIEELANEMINTGIELDNITYSTIITCAKKCSRFD 240

Query: 241 KAMEWFERMYKTGLMPDEVTYSAILDVYANLGKVEEVLSLYERGRASGWTPDPYTFSVLG 300
           KAMEWFERMY+TGLMPDEVTYSAILDVYANLGKVEE LSLYERGRASGW PDPYTFSVLG
Sbjct: 241 KAMEWFERMYRTGLMPDEVTYSAILDVYANLGKVEEALSLYERGRASGWKPDPYTFSVLG 300

Query: 301 KMFGEAGDYDGIMYVLQEMKSIEMQPNLVVYNTLLDAMGKAGKPGFARSLFDEMVESGIT 360
           KMFGEAGDYDGIMYVLQEMKSIE+QPNLVVYNTLLDAMGKAG+PGFARSLF+EM+ESGIT
Sbjct: 301 KMFGEAGDYDGIMYVLQEMKSIEVQPNLVVYNTLLDAMGKAGRPGFARSLFEEMIESGIT 360

Query: 361 PNEKTLTALVKIYGKARWARDALDLWERMRSNGWPMDFILYNTLLNMCADLGLEEEAETL 420
           PNEKTLTALVKIYGKARWARDAL+LWERMRS GWPMDFILYNTLLNMCADLGLEEEAE L
Sbjct: 361 PNEKTLTALVKIYGKARWARDALELWERMRSKGWPMDFILYNTLLNMCADLGLEEEAEKL 420

Query: 421 FEEMKKSKHSRPDSWSYTAMLNIYGSGGNVKRSMELFEEMLELGVEINVMCCTCLIQCLG 480
           FEEMKKS+HSRPDSWSYTAMLNI+GSGGNVKRSMELFEEMLELGV INVMCCTCLIQCLG
Sbjct: 421 FEEMKKSEHSRPDSWSYTAMLNIHGSGGNVKRSMELFEEMLELGVGINVMCCTCLIQCLG 480

Query: 481 KSGRIDDLVRVFNVSVQKGIKPDDRLCGCLLSVLSLCYNSEDINKVFTCLQQANPKLVSF 540
           K+ RIDDLVRVF+VSV+KG+KPDDRLCGCLLSV+SLC N+EDI+KVFTCLQQANPKLV+F
Sbjct: 481 KARRIDDLVRVFDVSVRKGVKPDDRLCGCLLSVVSLCDNNEDISKVFTCLQQANPKLVAF 540

Query: 541 INLLQQNDITFEVVKNEFRNILGETAPEARRPFCNCLIDICRNQNLRERAHELLYLGSLY 600
           +NLLQQNDITF+V+K+EFR ILGETA EARRPFCNCLIDICRNQNL +RAHELLYLGSLY
Sbjct: 541 VNLLQQNDITFDVIKDEFRTILGETATEARRPFCNCLIDICRNQNLSKRAHELLYLGSLY 600

Query: 601 GLYPGLHNKTETEWCLDVRSLSVGAAQTALEEWMITLSKIVQREEALPELLSAQTGAGTH 660
           GLYPGLHNKTE EWCLDVRSLSVGAAQTALEEWMITLSKIVQREEALPELLSAQTGAGTH
Sbjct: 601 GLYPGLHNKTEGEWCLDVRSLSVGAAQTALEEWMITLSKIVQREEALPELLSAQTGAGTH 660

Query: 661 RFSQGLANSFASHVDKLAAPFQLREDRAGWFVATREDLVTWVHSRVPSVAATA 711
           RFSQGLANSFASHV+KLAAPF+LREDRAGWFVA RED V WVHSRVPSVA  A
Sbjct: 661 RFSQGLANSFASHVEKLAAPFRLREDRAGWFVAKREDFVAWVHSRVPSVATRA 704

[Close]

BLAST of CSPI03G01850 vs. TAIR 10
Match: AT5G46580.1 (pentatricopeptide (PPR) repeat-containing protein )

HSP 1 Score: 983.4 bits (2541), Expect = 9.5e-287
Identity = 476/716 (66.48%), Postives = 592/716 (82.68%), Query Frame = 0


Query: 1   MAVPLSSSLDLKLKPT-------PIFFTSPLRRKNVTKRLTLLCSSSKSPRKPSSVSSQS 60
           MA  L++++D+   P         +F    L R++ +++L + CSS K P+   ++  + 
Sbjct: 1   MATVLTTAIDVCFNPQNSDTKKHSLFLKPSLFRQSRSRKLNISCSSLKQPK---TLEEEP 60

Query: 61  VDNKNPSLSEQLKNLSTTTLSNAPNDETRLLSKPKSTWVNPTKPKRSVLSLQRQKRSSYS 120
           +  K PSLSEQLK LS TTL     ++T++LSKPKS WVNPT+PKRSVLSLQRQKRS+YS
Sbjct: 61  ITTKTPSLSEQLKPLSATTLR---QEQTQILSKPKSVWVNPTRPKRSVLSLQRQKRSAYS 120

Query: 121 YNPKMRDLKSFAHKLNACDSSDDASFIAALEEIPHPPTKENALLILNSLRPWQKTHLFFN 180
           YNP+++DL++FA KLN+   ++ + F++ L+EIPHPP ++NALL+LNSLR WQKTH FFN
Sbjct: 121 YNPQIKDLRAFALKLNSSIFTEKSEFLSLLDEIPHPPNRDNALLVLNSLREWQKTHTFFN 180

Query: 181 WIKSQNLFPMETIFYNVAMKSLRYGRQFQLIEDLANEMISAGIELDNITYSTIITCAKKC 240
           W+KS++LFPMETIFYNV MKSLR+GRQFQLIE++A EM+  G+ELDNITYSTIITCAK+C
Sbjct: 181 WVKSKSLFPMETIFYNVTMKSLRFGRQFQLIEEMALEMVKDGVELDNITYSTIITCAKRC 240

Query: 241 SRFDKAMEWFERMYKTGLMPDEVTYSAILDVYANLGKVEEVLSLYERGRASGWTPDPYTF 300
           + ++KA+EWFERMYKTGLMPDEVTYSAILDVY+  GKVEEVLSLYER  A+GW PD   F
Sbjct: 241 NLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAF 300

Query: 301 SVLGKMFGEAGDYDGIMYVLQEMKSIEMQPNLVVYNTLLDAMGKAGKPGFARSLFDEMVE 360
           SVLGKMFGEAGDYDGI YVLQEMKS++++PN+VVYNTLL+AMG+AGKPG ARSLF+EM+E
Sbjct: 301 SVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLE 360

Query: 361 SGITPNEKTLTALVKIYGKARWARDALDLWERMRSNGWPMDFILYNTLLNMCADLGLEEE 420
           +G+TPNEKTLTALVKIYGKARWARDAL LWE M++  WPMDFILYNTLLNMCAD+GLEEE
Sbjct: 361 AGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEE 420

Query: 421 AETLFEEMKKSKHSRPDSWSYTAMLNIYGSGGNVKRSMELFEEMLELGVEINVMCCTCLI 480
           AE LF +MK+S   RPD++SYTAMLNIYGSGG  +++MELFEEML+ GV++NVM CTCL+
Sbjct: 421 AERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCLV 480

Query: 481 QCLGKSGRIDDLVRVFNVSVQKGIKPDDRLCGCLLSVLSLCYNSEDINKVFTCLQQANPK 540
           QCLGK+ RIDD+V VF++S+++G+KPDDRLCGCLLSV++LC +SED  KV  CL++AN K
Sbjct: 481 QCLGKAKRIDDVVYVFDLSIKRGVKPDDRLCGCLLSVMALCESSEDAEKVMACLERANKK 540

Query: 541 LVSFINLLQQNDITFEVVKNEFRNILGETAPEARRPFCNCLIDICRNQNLRERAHELLYL 600
           LV+F+NL+      +E VK EF+ ++  T  EARRPFCNCLIDICR  N  ERAHELLYL
Sbjct: 541 LVTFVNLIVDEKTEYETVKEEFKLVINATQVEARRPFCNCLIDICRGNNRHERAHELLYL 600

Query: 601 GSLYGLYPGLHNKTETEWCLDVRSLSVGAAQTALEEWMITLSKIVQREEALPELLSAQTG 660
           G+L+GLYPGLHNKT  EW LDVRSLSVGAA+TALEEWM TL+ I++R+E LPEL  AQTG
Sbjct: 601 GTLFGLYPGLHNKTIKEWSLDVRSLSVGAAETALEEWMRTLANIIKRQEELPELFLAQTG 660

Query: 661 AGTHRFSQGLANSFASHVDKLAAPFQLREDRAGWFVATREDLVTWVHSRVPSVAAT 710
            GTHRFSQGLANSFA H+ +L+APF+ + DR G FVAT+EDLV+W+ S+ P +  +
Sbjct: 661 TGTHRFSQGLANSFALHLQQLSAPFR-QSDRPGIFVATKEDLVSWLESKFPPLVTS 709

[Close]

BLAST of CSPI03G01850 vs. TAIR 10
Match: AT4G16390.1 (pentatricopeptide (PPR) repeat-containing protein )

HSP 1 Score: 448.4 bits (1152), Expect = 1.1e-125
Identity = 236/615 (38.37%), Postives = 365/615 (59.35%), Query Frame = 0


Query: 91  WVNPTKPKRSVLSLQRQKRSSYSYNPKMRDLKSFAHKLNACDSSDDASFIAALEEIPHPP 150
           WVNP  P+ S L   R+K    SY+ +   L   A  L+AC   ++A     +       
Sbjct: 89  WVNPKSPRASQL---RRK----SYDSRYSSLIKLAESLDAC-KPNEADVCDVITGFGGKL 148

Query: 151 TKENALLILNSLRPWQKTHLFFNWIKSQNLFPMETIFYNVAMKSLRYGRQFQLIEDLANE 210
            +++A++ LN++   +   L  N +        E I YNV MK  R  +  +  E L +E
Sbjct: 149 FEQDAVVTLNNMTNPETAPLVLNNLLETMKPSREVILYNVTMKVFRKSKDLEKSEKLFDE 208

Query: 211 MISAGIELDNITYSTIITCAKKCSRFDKAMEWFERMYKTGLMPDEVTYSAILDVYANLGK 270
           M+  GI+ DN T++TII+CA++     +A+EWFE+M   G  PD VT +A++D Y   G 
Sbjct: 209 MLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGN 268

Query: 271 VEEVLSLYERGRASGWTPDPYTFSVLGKMFGEAGDYDGIMYVLQEMKSIEMQPNLVVYNT 330
           V+  LSLY+R R   W  D  TFS L +++G +G+YDG + + +EMK++ ++PNLV+YN 
Sbjct: 269 VDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNR 328

Query: 331 LLDAMGKAGKPGFARSLFDEMVESGITPNEKTLTALVKIYGKARWARDALDLWERMRSNG 390
           L+D+MG+A +P  A+ ++ +++ +G TPN  T  ALV+ YG+AR+  DAL ++  M+  G
Sbjct: 329 LIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKG 388

Query: 391 WPMDFILYNTLLNMCADLGLEEEAETLFEEMKKSKHSRPDSWSYTAMLNIYGSGGNVKRS 450
             +  ILYNTLL+MCAD    +EA  +F++MK  +   PDSW++++++ +Y   G V  +
Sbjct: 389 LSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSEA 448

Query: 451 MELFEEMLELGVEINVMCCTCLIQCLGKSGRIDDLVRVFNVSVQKGIKPDDRLCGCLLSV 510
                +M E G E  +   T +IQC GK+ ++DD+VR F+  ++ GI PDDR CGCLL+V
Sbjct: 449 EAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVLELGITPDDRFCGCLLNV 508

Query: 511 LSLCYNSEDINKVFTCLQQANPKLVSFINLL-QQNDITFEVVKNEFRNILGETAPEARRP 570
           ++    SE+I K+  C+++A PKL   + +L ++ +    V K E   ++     + ++ 
Sbjct: 509 MTQT-PSEEIGKLIGCVEKAKPKLGQVVKMLVEEQNCEEGVFKKEASELIDSIGSDVKKA 568

Query: 571 FCNCLIDICRNQNLRERAHELLYLGSLYGLYPGLHNKTETEWCLDVRSLSVGAAQTALEE 630
           + NCLID+C N N  ERA E+L LG  Y +Y GL +K+ T+W L ++SLS+GAA TAL  
Sbjct: 569 YLNCLIDLCVNLNKLERACEILQLGLEYDIYTGLQSKSATQWSLHLKSLSLGAALTALHV 628

Query: 631 WMITLSK-IVQREEALPELLSAQTGAGTHRFS-QGLANSFASHVDKLAAPFQLREDRAGW 690
           WM  LS+  ++  E  P LL   TG G H++S +GLA  F SH+ +L APF    D+ GW
Sbjct: 629 WMNDLSEAALESGEEFPPLLGINTGHGKHKYSDKGLAAVFESHLKELNAPFHEAPDKVGW 688

Query: 691 FVATREDLVTWVHSR 703
           F+ T      W+ SR
Sbjct: 689 FLTTSVAAKAWLESR 694

[Close]

BLAST of CSPI03G01850 vs. TAIR 10
Match: AT1G18900.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 192.6 bits (488), Expect = 1.1e-48
Identity = 130/549 (23.68%), Postives = 247/549 (44.99%), Query Frame = 0


Query: 158 ILNSLRPWQKTHLFFNWIKSQNLFPMETIFYNVAMKSLRYGRQFQLIEDLANEMISAGIE 217
           +L  +  +     FF W+K Q  F  +   Y   + +L   +QF  I  L +EM+  G +
Sbjct: 337 VLKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQ 396

Query: 218 LDNITYSTIITCAKKCSRFDKAMEWFERMYKTGLMPDEVTYSAILDVYANLGKVEEVLSL 277
            + +TY+ +I    + +  ++AM  F +M + G  PD VTY  ++D++A  G ++  + +
Sbjct: 397 PNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDM 456

Query: 278 YERGRASGWTPDPYTFSVLGKMFGEAGDYDGIMYVLQEMKSIEMQPNLVVYNTLLDAMGK 337
           Y+R +A G +PD +T+SV                                   +++ +GK
Sbjct: 457 YQRMQAGGLSPDTFTYSV-----------------------------------IINCLGK 516

Query: 338 AGKPGFARSLFDEMVESGITPNEKTLTALVKIYGKARWARDALDLWERMRSNGWPMDFIL 397
           AG    A  LF EMV+ G TPN  T   ++ ++ KAR  ++AL L+  M++ G+  D + 
Sbjct: 517 AGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVT 576

Query: 398 YNTLLNMCADLGLEEEAETLFEEMKKSKHSRPDSWSYTAMLNIYGSGGNVKRSMELFEEM 457
           Y+ ++ +    G  EEAE +F EM++ K+  PD   Y  +++++G  GNV+++ + ++ M
Sbjct: 577 YSIVMEVLGHCGYLEEAEAVFTEMQQ-KNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAM 636

Query: 458 LELGVEINVMCCTCLIQCLGKSGRIDDLVRVFNVSVQKGIKPDDRLCGCLLSVLSLCYNS 517
           L  G+  NV  C  L+    +  +I +   +    +  G++P  +    LLS  +   + 
Sbjct: 637 LHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSK 696

Query: 518 EDINKVFTCLQQANPKLVSFINLLQQNDITFEVVK---NEFRNILGETAPEARRPFCNCL 577
            D+      +         F+  +       E V+   N F +++     E++R   + +
Sbjct: 697 LDMGFCGQLMASTGHPAHMFLLKMPAAGPDGENVRNHANNFLDLMHSEDRESKRGLVDAV 756

Query: 578 IDICRNQNLRERAHELLYLGSLYGLYP-GLHNKTETEWCLDVRSLSVGAAQTALEEWMIT 637
           +D       +E A  +  + +   ++P  L  K+ + W +++  +S G A TAL   +  
Sbjct: 757 VDFLHKSGQKEEAGSVWEVAAQKNVFPDALREKSCSYWLINLHVMSEGTAVTALSRTLAW 816

Query: 638 LSKIVQREEALPELLSAQTGAGTHRFSQG---LANSFASHVDKLAAPFQLREDRAGWFVA 697
             K +      P  +   TG G      G   +  +    ++   +PF      +G FV 
Sbjct: 817 FRKQMLASGTCPSRIDIVTGWGRRSRVTGTSMVRQAVEELLNIFGSPFFTESGNSGCFVG 849

Query: 698 TREDLVTWV 700
           + E L  W+
Sbjct: 877 SGEPLNRWL 849

[Close]

BLAST of CSPI03G01850 vs. TAIR 10
Match: AT1G18900.2 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 192.6 bits (488), Expect = 1.1e-48
Identity = 130/549 (23.68%), Postives = 247/549 (44.99%), Query Frame = 0


Query: 158 ILNSLRPWQKTHLFFNWIKSQNLFPMETIFYNVAMKSLRYGRQFQLIEDLANEMISAGIE 217
           +L  +  +     FF W+K Q  F  +   Y   + +L   +QF  I  L +EM+  G +
Sbjct: 337 VLKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQ 396

Query: 218 LDNITYSTIITCAKKCSRFDKAMEWFERMYKTGLMPDEVTYSAILDVYANLGKVEEVLSL 277
            + +TY+ +I    + +  ++AM  F +M + G  PD VTY  ++D++A  G ++  + +
Sbjct: 397 PNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDM 456

Query: 278 YERGRASGWTPDPYTFSVLGKMFGEAGDYDGIMYVLQEMKSIEMQPNLVVYNTLLDAMGK 337
           Y+R +A G +PD +T+SV                                   +++ +GK
Sbjct: 457 YQRMQAGGLSPDTFTYSV-----------------------------------IINCLGK 516

Query: 338 AGKPGFARSLFDEMVESGITPNEKTLTALVKIYGKARWARDALDLWERMRSNGWPMDFIL 397
           AG    A  LF EMV+ G TPN  T   ++ ++ KAR  ++AL L+  M++ G+  D + 
Sbjct: 517 AGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVT 576

Query: 398 YNTLLNMCADLGLEEEAETLFEEMKKSKHSRPDSWSYTAMLNIYGSGGNVKRSMELFEEM 457
           Y+ ++ +    G  EEAE +F EM++ K+  PD   Y  +++++G  GNV+++ + ++ M
Sbjct: 577 YSIVMEVLGHCGYLEEAEAVFTEMQQ-KNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAM 636

Query: 458 LELGVEINVMCCTCLIQCLGKSGRIDDLVRVFNVSVQKGIKPDDRLCGCLLSVLSLCYNS 517
           L  G+  NV  C  L+    +  +I +   +    +  G++P  +    LLS  +   + 
Sbjct: 637 LHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSK 696

Query: 518 EDINKVFTCLQQANPKLVSFINLLQQNDITFEVVK---NEFRNILGETAPEARRPFCNCL 577
            D+      +         F+  +       E V+   N F +++     E++R   + +
Sbjct: 697 LDMGFCGQLMASTGHPAHMFLLKMPAAGPDGENVRNHANNFLDLMHSEDRESKRGLVDAV 756

Query: 578 IDICRNQNLRERAHELLYLGSLYGLYP-GLHNKTETEWCLDVRSLSVGAAQTALEEWMIT 637
           +D       +E A  +  + +   ++P  L  K+ + W +++  +S G A TAL   +  
Sbjct: 757 VDFLHKSGQKEEAGSVWEVAAQKNVFPDALREKSCSYWLINLHVMSEGTAVTALSRTLAW 816

Query: 638 LSKIVQREEALPELLSAQTGAGTHRFSQG---LANSFASHVDKLAAPFQLREDRAGWFVA 697
             K +      P  +   TG G      G   +  +    ++   +PF      +G FV 
Sbjct: 817 FRKQMLASGTCPSRIDIVTGWGRRSRVTGTSMVRQAVEELLNIFGSPFFTESGNSGCFVG 849

Query: 698 TREDLVTWV 700
           + E L  W+
Sbjct: 877 SGEPLNRWL 849

[Close]

BLAST of CSPI03G01850 vs. TAIR 10
Match: AT1G18900.3 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 192.6 bits (488), Expect = 1.1e-48
Identity = 130/549 (23.68%), Postives = 247/549 (44.99%), Query Frame = 0


Query: 158 ILNSLRPWQKTHLFFNWIKSQNLFPMETIFYNVAMKSLRYGRQFQLIEDLANEMISAGIE 217
           +L  +  +     FF W+K Q  F  +   Y   + +L   +QF  I  L +EM+  G +
Sbjct: 337 VLKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQ 396

Query: 218 LDNITYSTIITCAKKCSRFDKAMEWFERMYKTGLMPDEVTYSAILDVYANLGKVEEVLSL 277
            + +TY+ +I    + +  ++AM  F +M + G  PD VTY  ++D++A  G ++  + +
Sbjct: 397 PNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDM 456

Query: 278 YERGRASGWTPDPYTFSVLGKMFGEAGDYDGIMYVLQEMKSIEMQPNLVVYNTLLDAMGK 337
           Y+R +A G +PD +T+SV                                   +++ +GK
Sbjct: 457 YQRMQAGGLSPDTFTYSV-----------------------------------IINCLGK 516

Query: 338 AGKPGFARSLFDEMVESGITPNEKTLTALVKIYGKARWARDALDLWERMRSNGWPMDFIL 397
           AG    A  LF EMV+ G TPN  T   ++ ++ KAR  ++AL L+  M++ G+  D + 
Sbjct: 517 AGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVT 576

Query: 398 YNTLLNMCADLGLEEEAETLFEEMKKSKHSRPDSWSYTAMLNIYGSGGNVKRSMELFEEM 457
           Y+ ++ +    G  EEAE +F EM++ K+  PD   Y  +++++G  GNV+++ + ++ M
Sbjct: 577 YSIVMEVLGHCGYLEEAEAVFTEMQQ-KNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAM 636

Query: 458 LELGVEINVMCCTCLIQCLGKSGRIDDLVRVFNVSVQKGIKPDDRLCGCLLSVLSLCYNS 517
           L  G+  NV  C  L+    +  +I +   +    +  G++P  +    LLS  +   + 
Sbjct: 637 LHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSK 696

Query: 518 EDINKVFTCLQQANPKLVSFINLLQQNDITFEVVK---NEFRNILGETAPEARRPFCNCL 577
            D+      +         F+  +       E V+   N F +++     E++R   + +
Sbjct: 697 LDMGFCGQLMASTGHPAHMFLLKMPAAGPDGENVRNHANNFLDLMHSEDRESKRGLVDAV 756

Query: 578 IDICRNQNLRERAHELLYLGSLYGLYP-GLHNKTETEWCLDVRSLSVGAAQTALEEWMIT 637
           +D       +E A  +  + +   ++P  L  K+ + W +++  +S G A TAL   +  
Sbjct: 757 VDFLHKSGQKEEAGSVWEVAAQKNVFPDALREKSCSYWLINLHVMSEGTAVTALSRTLAW 816

Query: 638 LSKIVQREEALPELLSAQTGAGTHRFSQG---LANSFASHVDKLAAPFQLREDRAGWFVA 697
             K +      P  +   TG G      G   +  +    ++   +PF      +G FV 
Sbjct: 817 FRKQMLASGTCPSRIDIVTGWGRRSRVTGTSMVRQAVEELLNIFGSPFFTESGNSGCFVG 849

Query: 698 TREDLVTWV 700
           + E L  W+
Sbjct: 877 SGEPLNRWL 849

The following BLAST results are available for this feature:

BLAST of CSPI03G01850 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LS25	1.3e-285	66.48	Pentatricopeptide repeat-containing protein At5g46580, chloroplastic OS=Arabidop...	[more]
B4F8Z1	7.0e-125	37.35	Pentatricopeptide repeat-containing protein ATP4, chloroplastic OS=Zea mays OX=4...	[more]
Q8GWE0	1.6e-124	38.37	Pentatricopeptide repeat-containing protein At4g16390, chloroplastic OS=Arabidop...	[more]
Q10PZ4	1.5e-122	37.78	Pentatricopeptide repeat-containing protein ATP4 homolog, chloroplastic OS=Oryza...	[more]
Q8GYP6	1.5e-47	23.68	Pentatricopeptide repeat-containing protein At1g18900 OS=Arabidopsis thaliana OX...	[more]

BLAST of CSPI03G01850 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L6K8	0.0e+00	100.00	Smr domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G011820 PE=3 SV...	[more]
A0A5A7UFR2	0.0e+00	96.34	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3BKZ1	0.0e+00	96.34	pentatricopeptide repeat-containing protein At5g46580, chloroplastic OS=Cucumis ...	[more]
A0A6J1CW10	0.0e+00	91.97	pentatricopeptide repeat-containing protein At5g46580, chloroplastic OS=Momordic...	[more]
A0A6J1L5S8	0.0e+00	88.53	pentatricopeptide repeat-containing protein At5g46580, chloroplastic-like OS=Cuc...	[more]

BLAST of CSPI03G01850 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004148730.1	0.0e+00	100.00	pentatricopeptide repeat-containing protein At5g46580, chloroplastic [Cucumis sa...	[more]
XP_008448710.1	0.0e+00	96.34	PREDICTED: pentatricopeptide repeat-containing protein At5g46580, chloroplastic ...	[more]
XP_038906217.1	0.0e+00	94.37	pentatricopeptide repeat-containing protein At5g46580, chloroplastic [Benincasa ...	[more]
XP_022145326.1	0.0e+00	91.97	pentatricopeptide repeat-containing protein At5g46580, chloroplastic [Momordica ...	[more]
KAG6577624.1	0.0e+00	88.92	Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a...	[more]

BLAST of CSPI03G01850 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G46580.1	9.5e-287	66.48	pentatricopeptide (PPR) repeat-containing protein	[more]
AT4G16390.1	1.1e-125	38.37	pentatricopeptide (PPR) repeat-containing protein	[more]
AT1G18900.1	1.1e-48	23.68	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G18900.2	1.1e-48	23.68	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G18900.3	1.1e-48	23.68	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 221..255 e-value: 6.1E-6 score: 24.1 coord: 468..500 e-value: 1.5E-5 score: 22.8 coord: 433..466 e-value: 3.2E-6 score: 24.9 coord: 362..394 e-value: 3.3E-5 score: 21.8 coord: 326..360 e-value: 1.7E-9 score: 35.2 coord: 256..289 e-value: 1.2E-4 score: 20.0 coord: 397..430 e-value: 1.7E-6 score: 25.8
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 396..439 e-value: 1.3E-7 score: 31.7 coord: 323..368 e-value: 6.5E-11 score: 42.3
IPR002885	Pentatricopeptide repeat	PFAM	PF13812	PPR_3	coord: 453..499 e-value: 0.0054 score: 16.8 coord: 208..266 e-value: 1.5E-8 score: 34.6
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 289..323 score: 9.032168
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 359..393 score: 9.799459
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 219..253 score: 11.169622
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 430..464 score: 11.191545
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 394..428 score: 10.468099
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 254..288 score: 11.147699
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 324..358 score: 12.75901
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 465..499 score: 9.930995
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 147..281 e-value: 1.9E-21 score: 78.5 coord: 282..354 e-value: 2.1E-13 score: 52.2
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 370..557 e-value: 1.6E-37 score: 131.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 37..107
None	No IPR available	PANTHER	PTHR47447	OS03G0856100 PROTEIN	coord: 27..703
None	No IPR available	PANTHER	PTHR47447:SF3	OS03G0856100 PROTEIN	coord: 27..703
None	No IPR available	SUPERFAMILY	81901	HCP-like	coord: 234..463
IPR002625	Smr domain	PROSITE	PS50828	SMR	coord: 613..696 score: 9.869678

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G01850.1	CSPI03G01850.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding