CSPI03G01780 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI03G01780
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	C2H2-type zinc finger family protein
Location	Chr3: 1256037 .. 1256870 (+)
RNA-Seq Expression	CSPI03G01780
Synteny	CSPI03G01780

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCCATCTTAAATGTTATCTACCCGCTAAACTCAACTCATCTCAACTACCTTCCAATTATTCTCGCTCGACAACGTAACTATTGGTGCTACCGAAATGTGGAATCCTAACCAAGCTCATCAAGACGAGGATGATGATTCATGGGAGATTAGAGCTTTTGCAGAAGACACCGGAAACATTATGGGCACAACTTGGCCCCCTAGGTTTTATAATTGCACATTTTGCGGACGAGAATTTAGATCTGCCCAAGCCCTAGGTGGTCACATGAATGTCCACCGTCGCGACCGTGTACGTTTCCATCACCAAATCCAACCCAACTCAATTCAACCCATCTCACCGTCTTTCACCATCCCTACCCCTAAACTCATCTACAATGAAATTGACGAGGTTTGTTTCTTATACCAACTACCGAACGACAACATCAATTTCCTCAACTCCATCACTTCATCAGATTCATGTCTCCAGTCATCCTTCACTGCACAACATCCTTCGAGCACTCGAACTGCGTCATCCTTGCAATCCCTAAAGTCTCCAGGAGAGCTTCGAGGTGGAACGTCGAGCTCCTCGTCTCACTGCAGCCACATATCTAGCAAAGGAGATGACTCATTAATATCAATTAATGATGGAAATGAGAAGGTGGATCTTGAGTTAAGACTTGGTCATAGGGCATCTCCAACTTGAGAATCAAAGGAAGAGAGAGATTGATCATGAAGTGGAAATAGTTAAAAACTAGCCCCCTTTAAGTTTTATCATGAAGAAGTAATGGTAAGAACTAATTAGAAGAGAGATGAGAGGAGGGAAAGTGTAAAATTAGGGTTTTAAAGAAAGACAAGGC

mRNA sequence

TCCCATCTTAAATGTTATCTACCCGCTAAACTCAACTCATCTCAACTACCTTCCAATTATTCTCGCTCGACAACGTAACTATTGGTGCTACCGAAATGTGGAATCCTAACCAAGCTCATCAAGACGAGGATGATGATTCATGGGAGATTAGAGCTTTTGCAGAAGACACCGGAAACATTATGGGCACAACTTGGCCCCCTAGGTTTTATAATTGCACATTTTGCGGACGAGAATTTAGATCTGCCCAAGCCCTAGGTGGTCACATGAATGTCCACCGTCGCGACCGTGTACGTTTCCATCACCAAATCCAACCCAACTCAATTCAACCCATCTCACCGTCTTTCACCATCCCTACCCCTAAACTCATCTACAATGAAATTGACGAGGTTTGTTTCTTATACCAACTACCGAACGACAACATCAATTTCCTCAACTCCATCACTTCATCAGATTCATGTCTCCAGTCATCCTTCACTGCACAACATCCTTCGAGCACTCGAACTGCGTCATCCTTGCAATCCCTAAAGTCTCCAGGAGAGCTTCGAGGTGGAACGTCGAGCTCCTCGTCTCACTGCAGCCACATATCTAGCAAAGGAGATGACTCATTAATATCAATTAATGATGGAAATGAGAAGGTGGATCTTGAGTTAAGACTTGGTCATAGGGCATCTCCAACTTGAGAATCAAAGGAAGAGAGAGATTGATCATGAAGTGGAAATAGTTAAAAACTAGCCCCCTTTAAGTTTTATCATGAAGAAGTAATGGTAAGAACTAATTAGAAGAGAGATGAGAGGAGGGAAAGTGTAAAATTAGGGTTTTAAAGAAAGACAAGGC

Coding sequence (CDS)

ATGTGGAATCCTAACCAAGCTCATCAAGACGAGGATGATGATTCATGGGAGATTAGAGCTTTTGCAGAAGACACCGGAAACATTATGGGCACAACTTGGCCCCCTAGGTTTTATAATTGCACATTTTGCGGACGAGAATTTAGATCTGCCCAAGCCCTAGGTGGTCACATGAATGTCCACCGTCGCGACCGTGTACGTTTCCATCACCAAATCCAACCCAACTCAATTCAACCCATCTCACCGTCTTTCACCATCCCTACCCCTAAACTCATCTACAATGAAATTGACGAGGTTTGTTTCTTATACCAACTACCGAACGACAACATCAATTTCCTCAACTCCATCACTTCATCAGATTCATGTCTCCAGTCATCCTTCACTGCACAACATCCTTCGAGCACTCGAACTGCGTCATCCTTGCAATCCCTAAAGTCTCCAGGAGAGCTTCGAGGTGGAACGTCGAGCTCCTCGTCTCACTGCAGCCACATATCTAGCAAAGGAGATGACTCATTAATATCAATTAATGATGGAAATGAGAAGGTGGATCTTGAGTTAAGACTTGGTCATAGGGCATCTCCAACTTGA

Protein sequence

MWNPNQAHQDEDDDSWEIRAFAEDTGNIMGTTWPPRFYNCTFCGREFRSAQALGGHMNVHRRDRVRFHHQIQPNSIQPISPSFTIPTPKLIYNEIDEVCFLYQLPNDNINFLNSITSSDSCLQSSFTAQHPSSTRTASSLQSLKSPGELRGGTSSSSSHCSHISSKGDDSLISINDGNEKVDLELRLGHRASPT*

Homology

[Close]

BLAST of CSPI03G01780 vs. ExPASy Swiss-Prot
Match: O80942 (Zinc finger protein 10 OS=Arabidopsis thaliana OX=3702 GN=ZFP10 PE=2 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 2.3e-14
Identity = 58/156 (37.18%), Postives = 79/156 (50.64%), Query Frame = 0


Query: 2   WNPNQAHQDEDDDSWEIRAFAEDTGNIMGTTWPPRFYNCTFCGREFRSAQALGGHMNVHR 61
           W P ++++   + SWE  AFAED  +  G+ WPPR Y C+FC REF+SAQALGGHMNVHR
Sbjct: 8   WIPKKSNK---ESSWEELAFAED--DAAGSLWPPRSYTCSFCRREFKSAQALGGHMNVHR 67

Query: 62  RDRVRFHHQIQPNSIQPISPSFTIPTPKLIYNEIDEVCFLYQLPNDNINFLNSITSSDSC 121
           RDR R             S S   P+ K   N  +  C+     N   N+  +  S    
Sbjct: 68  RDRARLKQADDQYLFPKSSSSPEYPSHKDSDNIHETSCYTLVF-NTKPNYFKTQHSCVID 127

Query: 122 LQSSFTAQHPSSTRTASSLQSLKSPGELRGGTSSSS 158
           L SS +  + + +R +S L     PG+    +S  S
Sbjct: 128 LSSSSSLPYLTPSRVSSGL-----PGKQHTSSSPPS 152

[Close]

BLAST of CSPI03G01780 vs. ExPASy Swiss-Prot
Match: Q38895 (Transcriptional regulator SUPERMAN OS=Arabidopsis thaliana OX=3702 GN=SUP PE=1 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 3.1e-14
Identity = 62/174 (35.63%), Postives = 86/174 (49.43%), Query Frame = 0


Query: 23  EDTGNIMGTTWPPRFYNCTFCGREFRSAQALGGHMNVHRRDRVRFHHQIQPNSIQPISPS 82
           +D   ++G +WPPR Y C+FC REFRSAQALGGHMNVHRRDR R   Q  P+S    SP 
Sbjct: 32  QDHDYLLGFSWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLRLQQSPSSSSTPSPP 91

Query: 83  FTIPTPKLIYNEIDEVCFLYQLPNDNINFLNSITSSDSCLQSSFTAQHPSSTRT-ASSLQ 142
           +  P P   Y+ +      +  P      L S  SS         +  P S  T  ++ +
Sbjct: 92  Y--PNPNYSYSTMANSPPPHHSPLTLFPTL-SPPSSPRYRAGLIRSLSPKSKHTPENACK 151

Query: 143 SLKSPGELRGGTSSSSSHCSHISSKGDDSLIS-------INDGNEKVDLELRLG 189
           + KS   +  G ++  +         +D +IS       IN+  + +DLELRLG
Sbjct: 152 TKKSSLLVEAGEATRFTSKDACKILRNDEIISLELEIGLINESEQDLDLELRLG 202

[Close]

BLAST of CSPI03G01780 vs. ExPASy Swiss-Prot
Match: Q9LHS9 (Probable transcriptional regulator RABBIT EARS OS=Arabidopsis thaliana OX=3702 GN=RBE PE=2 SV=2)

HSP 1 Score: 78.2 bits (191), Expect = 1.2e-13
Identity = 66/195 (33.85%), Postives = 95/195 (48.72%), Query Frame = 0


Query: 17  EIRAF--AEDTGNIMGTTWPPRFYNCTFCGREFRSAQALGGHMNVHRRDRVRFHHQ-IQP 76
           E RAF  AE+ G   G  WPPR Y+C+FCGREF+SAQALGGHMNVHRRDR R   Q + P
Sbjct: 32  EERAFASAEEYGGGGGCMWPPRSYSCSFCGREFKSAQALGGHMNVHRRDRARLKQQSLSP 91

Query: 77  NSIQPISPS--------FTIPTPKLIYNEIDEVCFLYQLPNDNINFLNSITSSDSCLQSS 136
           +S    +P           + +  L+  E        + PN     ++ + +++    S 
Sbjct: 92  SSTDQATPPECDRQQQVLDVGSKVLVQEET-------RKPNGTKREISDVCNNNVLESSM 151

Query: 137 FTAQHPS-STRTASSLQSLKSPGELRGGTSSSSSHCSHISSKGDDS-----------LIS 189
              +H +   +T  S+  L +  + R     + S  S   +K D S           +  
Sbjct: 152 KRYEHDNGEVKTDLSVGLLSTEFDPRKKQLINGSSSSWKRAKTDVSRFPMMLGLVIGISE 211

[Close]

BLAST of CSPI03G01780 vs. ExPASy Swiss-Prot
Match: Q9SLB8 (Zinc finger protein 11 OS=Arabidopsis thaliana OX=3702 GN=ZFP11 PE=2 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 4.6e-10
Identity = 60/193 (31.09%), Postives = 86/193 (44.56%), Query Frame = 0


Query: 33  WPPRFYNCTFCGREFRSAQALGGHMNVHRRDRVRFHH----QIQPNSIQPISPSFTIPTP 92
           WPP+ Y C+FC REFRSAQALGGHMNVHRRDR +         +P+   PI+        
Sbjct: 44  WPPKNYTCSFCRREFRSAQALGGHMNVHRRDRAKLRQIPSWLFEPHHHTPIAN------- 103

Query: 93  KLIYNEIDEVCFLYQLPNDNINFLNSITSSDSCLQSSFTAQHPSSTRTASS----LQSLK 152
                           PN N +  +S +++ + L+ S T Q   +T   S+    L S  
Sbjct: 104 ----------------PNPNFSSSSSSSTTTAHLEPSLTNQRSKTTPFPSARFDLLDSTT 163

Query: 153 SPGELRGGTSSSSSH-CSH---------------------ISSKGDDSL------ISIND 190
           S G L      + S+ CS                      + +K DD +      +S+ +
Sbjct: 164 SYGGLMMDREKNKSNVCSREIKKSAIDACHSVRCEISRGDLMNKKDDQVMGLELGMSLRN 213

[Close]

BLAST of CSPI03G01780 vs. ExPASy Swiss-Prot
Match: Q9SR34 (Transcriptional regulator TAC1 OS=Arabidopsis thaliana OX=3702 GN=TAC1 PE=2 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 6.8e-06
Identity = 28/73 (38.36%), Postives = 38/73 (52.05%), Query Frame = 0


Query: 3  NPNQAHQDEDDDSWEIRAFAEDTGNIMGTTWPPRFYNCTFCGREFRSAQALGGHMNVHRR 62
          NP  A    D  S       +D+ N        R Y C+FC R F +AQALGGHMN+HRR
Sbjct: 6  NPKNADDCSDSISKNSHQGVDDSLN------QSRSYVCSFCIRGFSNAQALGGHMNIHRR 65

Query: 63 DRVRFHHQIQPNS 76
          DR +   ++  ++
Sbjct: 66 DRAKLRQKLMEDN 72

[Close]

BLAST of CSPI03G01780 vs. ExPASy TrEMBL
Match: E2IBP9 (Palmate-like pentafoliata 1 transcription factor (Fragment) OS=Cucumis sativus OX=3659 GN=PALM1 PE=4 SV=1)

HSP 1 Score: 398.3 bits (1022), Expect = 1.9e-107
Identity = 194/194 (100.00%), Postives = 194/194 (100.00%), Query Frame = 0


Query: 1   MWNPNQAHQDEDDDSWEIRAFAEDTGNIMGTTWPPRFYNCTFCGREFRSAQALGGHMNVH 60
           MWNPNQAHQDEDDDSWEIRAFAEDTGNIMGTTWPPRFYNCTFCGREFRSAQALGGHMNVH
Sbjct: 1   MWNPNQAHQDEDDDSWEIRAFAEDTGNIMGTTWPPRFYNCTFCGREFRSAQALGGHMNVH 60

Query: 61  RRDRVRFHHQIQPNSIQPISPSFTIPTPKLIYNEIDEVCFLYQLPNDNINFLNSITSSDS 120
           RRDRVRFHHQIQPNSIQPISPSFTIPTPKLIYNEIDEVCFLYQLPNDNINFLNSITSSDS
Sbjct: 61  RRDRVRFHHQIQPNSIQPISPSFTIPTPKLIYNEIDEVCFLYQLPNDNINFLNSITSSDS 120

Query: 121 CLQSSFTAQHPSSTRTASSLQSLKSPGELRGGTSSSSSHCSHISSKGDDSLISINDGNEK 180
           CLQSSFTAQHPSSTRTASSLQSLKSPGELRGGTSSSSSHCSHISSKGDDSLISINDGNEK
Sbjct: 121 CLQSSFTAQHPSSTRTASSLQSLKSPGELRGGTSSSSSHCSHISSKGDDSLISINDGNEK 180

Query: 181 VDLELRLGHRASPT 195
           VDLELRLGHRASPT
Sbjct: 181 VDLELRLGHRASPT 194

[Close]

BLAST of CSPI03G01780 vs. ExPASy TrEMBL
Match: A0A5A7UCW5 (Transcriptional regulator SUPERMAN-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G001690 PE=4 SV=1)

HSP 1 Score: 362.5 bits (929), Expect = 1.1e-96
Identity = 180/195 (92.31%), Postives = 186/195 (95.38%), Query Frame = 0


Query: 1   MWNPNQAHQDEDDDSWEIRAFAEDTGNIMGTTWPPRFYNCTFCGREFRSAQALGGHMNVH 60
           M NPNQAHQDED DSWEIRAFAEDTGNIMGTTWPPRFYNCTFCGREFRSAQALGGHMNVH
Sbjct: 1   MLNPNQAHQDEDGDSWEIRAFAEDTGNIMGTTWPPRFYNCTFCGREFRSAQALGGHMNVH 60

Query: 61  RRDRVRFHHQIQPNSIQPISPSFTIPTPKLIY-NEIDEVCFLYQLPNDNINFLNSITSSD 120
           RRDRVRFHHQ Q NSIQ +SPSFTIPTPKLIY NEIDEVCFLYQLPNDNI+FLNSITSS 
Sbjct: 61  RRDRVRFHHQTQLNSIQHVSPSFTIPTPKLIYNNEIDEVCFLYQLPNDNIDFLNSITSSG 120

Query: 121 SCLQSSFTAQHPSSTRTASSLQSLKSPGELRGGTSSSSSHCSHISSKGDDSLISINDGNE 180
           +CLQS  TAQHPSS+RTASSLQSLKSPGELRGGTSSSSSHCSH+SSKGDDSLISINDGNE
Sbjct: 121 ACLQSPSTAQHPSSSRTASSLQSLKSPGELRGGTSSSSSHCSHMSSKGDDSLISINDGNE 180

Query: 181 KVDLELRLGHRASPT 195
           K+DLELRLGHRASPT
Sbjct: 181 KIDLELRLGHRASPT 195

[Close]

BLAST of CSPI03G01780 vs. ExPASy TrEMBL
Match: A0A1S3BKB5 (transcriptional regulator SUPERMAN-like OS=Cucumis melo OX=3656 GN=LOC103490792 PE=4 SV=1)

HSP 1 Score: 362.5 bits (929), Expect = 1.1e-96
Identity = 180/195 (92.31%), Postives = 186/195 (95.38%), Query Frame = 0


Query: 1   MWNPNQAHQDEDDDSWEIRAFAEDTGNIMGTTWPPRFYNCTFCGREFRSAQALGGHMNVH 60
           M NPNQAHQDED DSWEIRAFAEDTGNIMGTTWPPRFYNCTFCGREFRSAQALGGHMNVH
Sbjct: 71  MLNPNQAHQDEDGDSWEIRAFAEDTGNIMGTTWPPRFYNCTFCGREFRSAQALGGHMNVH 130

Query: 61  RRDRVRFHHQIQPNSIQPISPSFTIPTPKLIY-NEIDEVCFLYQLPNDNINFLNSITSSD 120
           RRDRVRFHHQ Q NSIQ +SPSFTIPTPKLIY NEIDEVCFLYQLPNDNI+FLNSITSS 
Sbjct: 131 RRDRVRFHHQTQLNSIQHVSPSFTIPTPKLIYNNEIDEVCFLYQLPNDNIDFLNSITSSG 190

Query: 121 SCLQSSFTAQHPSSTRTASSLQSLKSPGELRGGTSSSSSHCSHISSKGDDSLISINDGNE 180
           +CLQS  TAQHPSS+RTASSLQSLKSPGELRGGTSSSSSHCSH+SSKGDDSLISINDGNE
Sbjct: 191 ACLQSPSTAQHPSSSRTASSLQSLKSPGELRGGTSSSSSHCSHMSSKGDDSLISINDGNE 250

Query: 181 KVDLELRLGHRASPT 195
           K+DLELRLGHRASPT
Sbjct: 251 KIDLELRLGHRASPT 265

[Close]

BLAST of CSPI03G01780 vs. ExPASy TrEMBL
Match: A0A6J1CUC9 (zinc finger protein 11-like OS=Momordica charantia OX=3673 GN=LOC111014851 PE=4 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 5.5e-67
Identity = 144/201 (71.64%), Postives = 160/201 (79.60%), Query Frame = 0


Query: 1   MWNPNQAHQDEDDDSWEIRAFAEDTGNIMGTTWPPRFYNCTFCGREFRSAQALGGHMNVH 60
           MWNPNQ HQD+DDDSWEIRAFAEDTGNIMGTTWPPRFY CTFC REFRSAQALGGHMNVH
Sbjct: 1   MWNPNQPHQDDDDDSWEIRAFAEDTGNIMGTTWPPRFYTCTFCRREFRSAQALGGHMNVH 60

Query: 61  RRDRVRFHHQIQPNSIQPI----SPSFTIPTPKLIY-NEIDEVCFLYQLPNDNINFLNSI 120
           RRDR RFHHQ QPNSIQPI    S SF +PT + IY       CF YQLPNDN  FLN I
Sbjct: 61  RRDRARFHHQTQPNSIQPISSPSSSSFAVPTAEDIYGGGGGGFCFFYQLPNDNGGFLNPI 120

Query: 121 TSSDSCLQSSFTAQHPSSTRTASSLQSLKSPGELRGGTSSSSSHCSHISSKGD-DSLISI 180
           TS  +CL+S +    PS+   +SSL S KSP ELRG +S+SSSHCSHISSKGD +SLISI
Sbjct: 121 TSG-ACLRSPY----PSN---SSSLPSAKSPEELRGTSSASSSHCSHISSKGDHESLISI 180

Query: 181 NDGNE-KVDLELRLGHRASPT 195
           +DG++ K+DLELRLGHR SP+
Sbjct: 181 DDGDDPKLDLELRLGHRPSPS 193

[Close]

BLAST of CSPI03G01780 vs. ExPASy TrEMBL
Match: A0A2N9EKI1 (C2H2-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS3195 PE=4 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 6.3e-39
Identity = 110/206 (53.40%), Postives = 126/206 (61.17%), Query Frame = 0


Query: 1   MWNPNQAHQDEDDDSWEIRAFAEDTGNIMGTTWPPRFYNCTFCGREFRSAQALGGHMNVH 60
           MWNP QAHQ EDDDSWE+RAFAEDTGNI+GTTWPPR Y C FC REFRSAQALGGHMNVH
Sbjct: 1   MWNPKQAHQ-EDDDSWEVRAFAEDTGNILGTTWPPRSYTCNFCRREFRSAQALGGHMNVH 60

Query: 61  RRDRVRFHHQIQPNSIQPI--SPSFT----IPTPKLIYNEIDEVCFLYQLPNDNINFLNS 120
           RRDR R  HQ QP+SI PI  SP+ T    IP+ + + N    +C LYQLPN N  F  S
Sbjct: 61  RRDRARL-HQAQPSSINPITSSPNSTSSLIIPSQEFLANG-GGLCLLYQLPNYNTAFPTS 120

Query: 121 ITSSDSCLQSSFTAQHPSSTRTASSLQSLKSP-------GELRGGTSSSSSHCSHISSKG 180
            T  ++C++S  T    S     + +    SP       G  RG   SSSS     SSK 
Sbjct: 121 -TPINTCIESPSTLLSISPYPPNNLISPASSPPPTNFPLGPPRGTNPSSSSSSYCYSSKP 180

Query: 181 DDSLISINDGN---EKVDLELRLGHR 191
           +  L S  D     E +DLELRLG R
Sbjct: 181 EQQLSSTTDNYSNIEDLDLELRLGQR 202

[Close]

BLAST of CSPI03G01780 vs. NCBI nr
Match: XP_004148758.1 (transcriptional regulator SUPERMAN [Cucumis sativus] >ADO15281.1 palmate-like pentafoliata 1 transcription factor, partial [Cucumis sativus])

HSP 1 Score: 398.3 bits (1022), Expect = 3.9e-107
Identity = 194/194 (100.00%), Postives = 194/194 (100.00%), Query Frame = 0


Query: 1   MWNPNQAHQDEDDDSWEIRAFAEDTGNIMGTTWPPRFYNCTFCGREFRSAQALGGHMNVH 60
           MWNPNQAHQDEDDDSWEIRAFAEDTGNIMGTTWPPRFYNCTFCGREFRSAQALGGHMNVH
Sbjct: 1   MWNPNQAHQDEDDDSWEIRAFAEDTGNIMGTTWPPRFYNCTFCGREFRSAQALGGHMNVH 60

Query: 61  RRDRVRFHHQIQPNSIQPISPSFTIPTPKLIYNEIDEVCFLYQLPNDNINFLNSITSSDS 120
           RRDRVRFHHQIQPNSIQPISPSFTIPTPKLIYNEIDEVCFLYQLPNDNINFLNSITSSDS
Sbjct: 61  RRDRVRFHHQIQPNSIQPISPSFTIPTPKLIYNEIDEVCFLYQLPNDNINFLNSITSSDS 120

Query: 121 CLQSSFTAQHPSSTRTASSLQSLKSPGELRGGTSSSSSHCSHISSKGDDSLISINDGNEK 180
           CLQSSFTAQHPSSTRTASSLQSLKSPGELRGGTSSSSSHCSHISSKGDDSLISINDGNEK
Sbjct: 121 CLQSSFTAQHPSSTRTASSLQSLKSPGELRGGTSSSSSHCSHISSKGDDSLISINDGNEK 180

Query: 181 VDLELRLGHRASPT 195
           VDLELRLGHRASPT
Sbjct: 181 VDLELRLGHRASPT 194

[Close]

BLAST of CSPI03G01780 vs. NCBI nr
Match: KAA0053050.1 (transcriptional regulator SUPERMAN-like [Cucumis melo var. makuwa] >TYK11505.1 transcriptional regulator SUPERMAN-like [Cucumis melo var. makuwa])

HSP 1 Score: 362.5 bits (929), Expect = 2.3e-96
Identity = 180/195 (92.31%), Postives = 186/195 (95.38%), Query Frame = 0


Query: 1   MWNPNQAHQDEDDDSWEIRAFAEDTGNIMGTTWPPRFYNCTFCGREFRSAQALGGHMNVH 60
           M NPNQAHQDED DSWEIRAFAEDTGNIMGTTWPPRFYNCTFCGREFRSAQALGGHMNVH
Sbjct: 1   MLNPNQAHQDEDGDSWEIRAFAEDTGNIMGTTWPPRFYNCTFCGREFRSAQALGGHMNVH 60

Query: 61  RRDRVRFHHQIQPNSIQPISPSFTIPTPKLIY-NEIDEVCFLYQLPNDNINFLNSITSSD 120
           RRDRVRFHHQ Q NSIQ +SPSFTIPTPKLIY NEIDEVCFLYQLPNDNI+FLNSITSS 
Sbjct: 61  RRDRVRFHHQTQLNSIQHVSPSFTIPTPKLIYNNEIDEVCFLYQLPNDNIDFLNSITSSG 120

Query: 121 SCLQSSFTAQHPSSTRTASSLQSLKSPGELRGGTSSSSSHCSHISSKGDDSLISINDGNE 180
           +CLQS  TAQHPSS+RTASSLQSLKSPGELRGGTSSSSSHCSH+SSKGDDSLISINDGNE
Sbjct: 121 ACLQSPSTAQHPSSSRTASSLQSLKSPGELRGGTSSSSSHCSHMSSKGDDSLISINDGNE 180

Query: 181 KVDLELRLGHRASPT 195
           K+DLELRLGHRASPT
Sbjct: 181 KIDLELRLGHRASPT 195

[Close]

BLAST of CSPI03G01780 vs. NCBI nr
Match: XP_008448698.1 (PREDICTED: transcriptional regulator SUPERMAN-like [Cucumis melo])

HSP 1 Score: 362.5 bits (929), Expect = 2.3e-96
Identity = 180/195 (92.31%), Postives = 186/195 (95.38%), Query Frame = 0


Query: 1   MWNPNQAHQDEDDDSWEIRAFAEDTGNIMGTTWPPRFYNCTFCGREFRSAQALGGHMNVH 60
           M NPNQAHQDED DSWEIRAFAEDTGNIMGTTWPPRFYNCTFCGREFRSAQALGGHMNVH
Sbjct: 71  MLNPNQAHQDEDGDSWEIRAFAEDTGNIMGTTWPPRFYNCTFCGREFRSAQALGGHMNVH 130

Query: 61  RRDRVRFHHQIQPNSIQPISPSFTIPTPKLIY-NEIDEVCFLYQLPNDNINFLNSITSSD 120
           RRDRVRFHHQ Q NSIQ +SPSFTIPTPKLIY NEIDEVCFLYQLPNDNI+FLNSITSS 
Sbjct: 131 RRDRVRFHHQTQLNSIQHVSPSFTIPTPKLIYNNEIDEVCFLYQLPNDNIDFLNSITSSG 190

Query: 121 SCLQSSFTAQHPSSTRTASSLQSLKSPGELRGGTSSSSSHCSHISSKGDDSLISINDGNE 180
           +CLQS  TAQHPSS+RTASSLQSLKSPGELRGGTSSSSSHCSH+SSKGDDSLISINDGNE
Sbjct: 191 ACLQSPSTAQHPSSSRTASSLQSLKSPGELRGGTSSSSSHCSHMSSKGDDSLISINDGNE 250

Query: 181 KVDLELRLGHRASPT 195
           K+DLELRLGHRASPT
Sbjct: 251 KIDLELRLGHRASPT 265

[Close]

BLAST of CSPI03G01780 vs. NCBI nr
Match: KGN55789.2 (hypothetical protein Csa_011469 [Cucumis sativus])

HSP 1 Score: 332.0 bits (850), Expect = 3.4e-87
Identity = 168/194 (86.60%), Postives = 168/194 (86.60%), Query Frame = 0


Query: 1   MWNPNQAHQDEDDDSWEIRAFAEDTGNIMGTTWPPRFYNCTFCGREFRSAQALGGHMNVH 60
           MWNPNQAHQDEDDDSWEIRAFAEDTGNIMGTTWPPRFYNCTFCGREFRSAQALGGHMNVH
Sbjct: 1   MWNPNQAHQDEDDDSWEIRAFAEDTGNIMGTTWPPRFYNCTFCGREFRSAQALGGHMNVH 60

Query: 61  RRDRVRFHHQIQPNSIQPISPSFTIPTPKLIYNEIDEVCFLYQLPNDNINFLNSITSSDS 120
           RRDRVRFHHQIQPNSIQPISPSFTIPTPKLIYNEIDE                       
Sbjct: 61  RRDRVRFHHQIQPNSIQPISPSFTIPTPKLIYNEIDE----------------------- 120

Query: 121 CLQSSFTAQHPSSTRTASSLQSLKSPGELRGGTSSSSSHCSHISSKGDDSLISINDGNEK 180
              SSFTAQHPSSTRTASSLQSLKSPGELRGGTSSSSSHCSHISSKGDDSLISINDGNEK
Sbjct: 121 ---SSFTAQHPSSTRTASSLQSLKSPGELRGGTSSSSSHCSHISSKGDDSLISINDGNEK 168

Query: 181 VDLELRLGHRASPT 195
           VDLELRLGHRASPT
Sbjct: 181 VDLELRLGHRASPT 168

[Close]

BLAST of CSPI03G01780 vs. NCBI nr
Match: XP_038905278.1 (transcriptional regulator SUPERMAN-like [Benincasa hispida])

HSP 1 Score: 328.9 bits (842), Expect = 2.9e-86
Identity = 158/193 (81.87%), Postives = 172/193 (89.12%), Query Frame = 0


Query: 1   MWNPNQAHQDEDDDSWEIRAFAEDTGNIMGTTWPPRFYNCTFCGREFRSAQALGGHMNVH 60
           MWNP+QAHQDEDDDSWEIRAFAEDT N+MGTTWPPRFYNCTFCGREFRSAQALGGHMNVH
Sbjct: 1   MWNPSQAHQDEDDDSWEIRAFAEDTENVMGTTWPPRFYNCTFCGREFRSAQALGGHMNVH 60

Query: 61  RRDRVRFHHQIQPNSIQPISPSFTIPTPKLIYNEIDEVCFLYQLPNDNINFLNSITSSDS 120
           RRDRVR HH    NSIQPIS SFTIP PKL+YNE D VCFLYQLP ++I+FLNSITSS +
Sbjct: 61  RRDRVRLHHHPHSNSIQPISSSFTIPAPKLVYNESDGVCFLYQLPKNSIDFLNSITSSSA 120

Query: 121 CLQSSFTAQHPSSTRTASSLQSLKSPGELRGGTSSSSSHCSHISSKGDDSLISINDGNEK 180
           CLQS    Q+PS+  T SSLQS+KSPGELRGGTSSSSSHCSH+S KGDDS+ISI+DGNEK
Sbjct: 121 CLQSPSATQYPSNIPTTSSLQSVKSPGELRGGTSSSSSHCSHMSGKGDDSIISIDDGNEK 180

Query: 181 VDLELRLGHRASP 194
           +DLELRLGHR SP
Sbjct: 181 LDLELRLGHRTSP 193

[Close]

BLAST of CSPI03G01780 vs. TAIR 10
Match: AT4G17810.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 114.0 bits (284), Expect = 1.4e-25
Identity = 85/210 (40.48%), Postives = 107/210 (50.95%), Query Frame = 0


Query: 1   MWNPNQAHQDEDDD-SWEIRAFAEDT-GNIMGTTWPPRFYNCTFCGREFRSAQALGGHMN 60
           MWNPN+  + EDDD SWE++AF +DT GNI GTTWPPR Y C FC REFRSAQALGGHMN
Sbjct: 7   MWNPNKIEELEDDDESWEVKAFEQDTKGNISGTTWPPRSYTCNFCRREFRSAQALGGHMN 66

Query: 61  VHRRDRVRF---------------HHQIQPNSIQPISPSFTIPTPKLIYNEIDEVCFLYQ 120
           VHRRDR                  H  +  NS  P  P+ T+       N I+ +   YQ
Sbjct: 67  VHRRDRASSRAHQGSTVAAAARSGHGGMLLNSCAPPLPTTTLIIQSTASN-IEGLSHFYQ 126

Query: 121 LPNDNINFLNSITSSDSCLQSSFTAQHPSSTRTASSLQSLKSPGELRGGTSSSSSHCSHI 180
           L N +  F N   S D       T+  PS+         L SP E+              
Sbjct: 127 LQNPSGIFGN---SGDMVNLYGTTSFPPSNL----PFSMLNSPVEV-------PPRLIEY 186

Query: 181 SSKGDDSLISINDGN----EKVDLELRLGH 190
           S+  D+S+ S+ +      +++DLELRLGH
Sbjct: 187 STGDDESIGSMKEATGTSVDELDLELRLGH 201

[Close]

BLAST of CSPI03G01780 vs. TAIR 10
Match: AT2G37740.1 (zinc-finger protein 10 )

HSP 1 Score: 80.5 bits (197), Expect = 1.7e-15
Identity = 58/156 (37.18%), Postives = 79/156 (50.64%), Query Frame = 0


Query: 2   WNPNQAHQDEDDDSWEIRAFAEDTGNIMGTTWPPRFYNCTFCGREFRSAQALGGHMNVHR 61
           W P ++++   + SWE  AFAED  +  G+ WPPR Y C+FC REF+SAQALGGHMNVHR
Sbjct: 8   WIPKKSNK---ESSWEELAFAED--DAAGSLWPPRSYTCSFCRREFKSAQALGGHMNVHR 67

Query: 62  RDRVRFHHQIQPNSIQPISPSFTIPTPKLIYNEIDEVCFLYQLPNDNINFLNSITSSDSC 121
           RDR R             S S   P+ K   N  +  C+     N   N+  +  S    
Sbjct: 68  RDRARLKQADDQYLFPKSSSSPEYPSHKDSDNIHETSCYTLVF-NTKPNYFKTQHSCVID 127

Query: 122 LQSSFTAQHPSSTRTASSLQSLKSPGELRGGTSSSS 158
           L SS +  + + +R +S L     PG+    +S  S
Sbjct: 128 LSSSSSLPYLTPSRVSSGL-----PGKQHTSSSPPS 152

[Close]

BLAST of CSPI03G01780 vs. TAIR 10
Match: AT3G23130.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 80.1 bits (196), Expect = 2.2e-15
Identity = 62/174 (35.63%), Postives = 86/174 (49.43%), Query Frame = 0


Query: 23  EDTGNIMGTTWPPRFYNCTFCGREFRSAQALGGHMNVHRRDRVRFHHQIQPNSIQPISPS 82
           +D   ++G +WPPR Y C+FC REFRSAQALGGHMNVHRRDR R   Q  P+S    SP 
Sbjct: 32  QDHDYLLGFSWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLRLQQSPSSSSTPSPP 91

Query: 83  FTIPTPKLIYNEIDEVCFLYQLPNDNINFLNSITSSDSCLQSSFTAQHPSSTRT-ASSLQ 142
           +  P P   Y+ +      +  P      L S  SS         +  P S  T  ++ +
Sbjct: 92  Y--PNPNYSYSTMANSPPPHHSPLTLFPTL-SPPSSPRYRAGLIRSLSPKSKHTPENACK 151

Query: 143 SLKSPGELRGGTSSSSSHCSHISSKGDDSLIS-------INDGNEKVDLELRLG 189
           + KS   +  G ++  +         +D +IS       IN+  + +DLELRLG
Sbjct: 152 TKKSSLLVEAGEATRFTSKDACKILRNDEIISLELEIGLINESEQDLDLELRLG 202

[Close]

BLAST of CSPI03G01780 vs. TAIR 10
Match: AT5G06070.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 78.2 bits (191), Expect = 8.2e-15
Identity = 66/195 (33.85%), Postives = 95/195 (48.72%), Query Frame = 0


Query: 17  EIRAF--AEDTGNIMGTTWPPRFYNCTFCGREFRSAQALGGHMNVHRRDRVRFHHQ-IQP 76
           E RAF  AE+ G   G  WPPR Y+C+FCGREF+SAQALGGHMNVHRRDR R   Q + P
Sbjct: 32  EERAFASAEEYGGGGGCMWPPRSYSCSFCGREFKSAQALGGHMNVHRRDRARLKQQSLSP 91

Query: 77  NSIQPISPS--------FTIPTPKLIYNEIDEVCFLYQLPNDNINFLNSITSSDSCLQSS 136
           +S    +P           + +  L+  E        + PN     ++ + +++    S 
Sbjct: 92  SSTDQATPPECDRQQQVLDVGSKVLVQEET-------RKPNGTKREISDVCNNNVLESSM 151

Query: 137 FTAQHPS-STRTASSLQSLKSPGELRGGTSSSSSHCSHISSKGDDS-----------LIS 189
              +H +   +T  S+  L +  + R     + S  S   +K D S           +  
Sbjct: 152 KRYEHDNGEVKTDLSVGLLSTEFDPRKKQLINGSSSSWKRAKTDVSRFPMMLGLVIGISE 211

[Close]

BLAST of CSPI03G01780 vs. TAIR 10
Match: AT2G42410.1 (zinc finger protein 11 )

HSP 1 Score: 66.2 bits (160), Expect = 3.2e-11
Identity = 60/193 (31.09%), Postives = 86/193 (44.56%), Query Frame = 0


Query: 33  WPPRFYNCTFCGREFRSAQALGGHMNVHRRDRVRFHH----QIQPNSIQPISPSFTIPTP 92
           WPP+ Y C+FC REFRSAQALGGHMNVHRRDR +         +P+   PI+        
Sbjct: 44  WPPKNYTCSFCRREFRSAQALGGHMNVHRRDRAKLRQIPSWLFEPHHHTPIAN------- 103

Query: 93  KLIYNEIDEVCFLYQLPNDNINFLNSITSSDSCLQSSFTAQHPSSTRTASS----LQSLK 152
                           PN N +  +S +++ + L+ S T Q   +T   S+    L S  
Sbjct: 104 ----------------PNPNFSSSSSSSTTTAHLEPSLTNQRSKTTPFPSARFDLLDSTT 163

Query: 153 SPGELRGGTSSSSSH-CSH---------------------ISSKGDDSL------ISIND 190
           S G L      + S+ CS                      + +K DD +      +S+ +
Sbjct: 164 SYGGLMMDREKNKSNVCSREIKKSAIDACHSVRCEISRGDLMNKKDDQVMGLELGMSLRN 213

The following BLAST results are available for this feature:

BLAST of CSPI03G01780 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O80942	2.3e-14	37.18	Zinc finger protein 10 OS=Arabidopsis thaliana OX=3702 GN=ZFP10 PE=2 SV=1	[more]
Q38895	3.1e-14	35.63	Transcriptional regulator SUPERMAN OS=Arabidopsis thaliana OX=3702 GN=SUP PE=1 S...	[more]
Q9LHS9	1.2e-13	33.85	Probable transcriptional regulator RABBIT EARS OS=Arabidopsis thaliana OX=3702 G...	[more]
Q9SLB8	4.6e-10	31.09	Zinc finger protein 11 OS=Arabidopsis thaliana OX=3702 GN=ZFP11 PE=2 SV=1	[more]
Q9SR34	6.8e-06	38.36	Transcriptional regulator TAC1 OS=Arabidopsis thaliana OX=3702 GN=TAC1 PE=2 SV=1	[more]

BLAST of CSPI03G01780 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
E2IBP9	1.9e-107	100.00	Palmate-like pentafoliata 1 transcription factor (Fragment) OS=Cucumis sativus O...	[more]
A0A5A7UCW5	1.1e-96	92.31	Transcriptional regulator SUPERMAN-like OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A1S3BKB5	1.1e-96	92.31	transcriptional regulator SUPERMAN-like OS=Cucumis melo OX=3656 GN=LOC103490792 ...	[more]
A0A6J1CUC9	5.5e-67	71.64	zinc finger protein 11-like OS=Momordica charantia OX=3673 GN=LOC111014851 PE=4 ...	[more]
A0A2N9EKI1	6.3e-39	53.40	C2H2-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS3195...	[more]

BLAST of CSPI03G01780 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004148758.1	3.9e-107	100.00	transcriptional regulator SUPERMAN [Cucumis sativus] >ADO15281.1 palmate-like pe...	[more]
KAA0053050.1	2.3e-96	92.31	transcriptional regulator SUPERMAN-like [Cucumis melo var. makuwa] >TYK11505.1 t...	[more]
XP_008448698.1	2.3e-96	92.31	PREDICTED: transcriptional regulator SUPERMAN-like [Cucumis melo]	[more]
KGN55789.2	3.4e-87	86.60	hypothetical protein Csa_011469 [Cucumis sativus]	[more]
XP_038905278.1	2.9e-86	81.87	transcriptional regulator SUPERMAN-like [Benincasa hispida]	[more]

BLAST of CSPI03G01780 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G17810.1	1.4e-25	40.48	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT2G37740.1	1.7e-15	37.18	zinc-finger protein 10	[more]
AT3G23130.1	2.2e-15	35.63	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT5G06070.1	8.2e-15	33.85	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT2G42410.1	3.2e-11	31.09	zinc finger protein 11	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013087	Zinc finger C2H2-type	SMART	SM00355	c2h2final6	coord: 38..60 e-value: 0.0036 score: 26.5
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 40..60
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 38..65 score: 11.759394
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 29..78 e-value: 7.3E-6 score: 27.7
None	No IPR available	PFAM	PF13912	zf-C2H2_6	coord: 38..62 e-value: 1.5E-7 score: 31.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 132..166
None	No IPR available	PANTHER	PTHR45801:SF59	ZINC FINGER C2H2-TYPE/INTEGRASE DNA-BINDING DOMAIN-CONTAINING PROTEIN-RELATED	coord: 1..190
None	No IPR available	PANTHER	PTHR45801	OS07G0101800 PROTEIN	coord: 1..190
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 35..65

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G01780.1	CSPI03G01780.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016132	brassinosteroid biosynthetic process
biological_process	GO:0010268	brassinosteroid homeostasis
biological_process	GO:0016125	sterol metabolic process
cellular_component	GO:0005783	endoplasmic reticulum
molecular_function	GO:0051777	ent-kaurenoate oxidase activity
molecular_function	GO:0020037	heme binding
molecular_function	GO:0005506	iron ion binding