CSPI03G01620 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI03G01620
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Ubiquitin carboxyl-terminal hydrolase
Location	Chr3: 1155687 .. 1156361 (-)
RNA-Seq Expression	CSPI03G01620
Synteny	CSPI03G01620

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGGGGCTGGAAACGAAGACATGGAGGATGATACGCCAACCCCAACCCCAACTCAAACTCCAACTCCAACACCAACACCAACACCGACTTTGAGCTCAACATCAGAGGCTGCAAGTAGACATGTAGTGGTCGTCATGGATGGAATGGAAGAGTTCACAACGGACCCACTTAAGTGGGCATTGGACAACGTCATTAAGCCTGGTTGCATCGTTACTCTTGTTGGTGCAATGCCGTGGCTCAATATTCCTCGTGAGTTTTTTTACCTGTTTTTCTTAACATCGAACTGTATGATTGTTCTAGCGTTTTCTTAATATCATTACATAAATGAATTTTTGTAGTCTCATCAAAAACTTGGTTGGATATTTGGCCAATAAATTTGGAGGAGATGTCCTTTGAGGGAGTGGAAAGAGAGTATATTAGTGAAGCCAAATATGCAAAACTTGAAGCTGTGGTATCACTCTGTAGGAAATATGGGGTATATACATTTTTGGTTAATATTTTCAAAGCATATTTTATTAATGAATCAGTGTATTATTATTACCTTTTTCTTTTTTCTTTTTGTTTCTCAGGTTGTGCCACAAAAGAAAGTAGTAATGGGTCATCCACTTAGATTGCTTATTGTTGAGCAAATCTCAAGCCTTCATGCAACATGGGTTGTATTTGATAAGTAA

mRNA sequence

ATGGCAGGGGCTGGAAACGAAGACATGGAGGATGATACGCCAACCCCAACCCCAACTCAAACTCCAACTCCAACACCAACACCAACACCGACTTTGAGCTCAACATCAGAGGCTGCAAGTAGACATGTAGTGGTCGTCATGGATGGAATGGAAGAGTTCACAACGGACCCACTTAAGTGGGCATTGGACAACGTCATTAAGCCTGGTTGCATCGTTACTCTTGTTGGTGCAATGCCGTGGCTCAATATTCCTCTCTCATCAAAAACTTGGTTGGATATTTGGCCAATAAATTTGGAGGAGATGTCCTTTGAGGGAGTGGAAAGAGAGTATATTAGTGAAGCCAAATATGCAAAACTTGAAGCTGTGGTATCACTCTGTAGGAAATATGGGGTTGTGCCACAAAAGAAAGTAGTAATGGGTCATCCACTTAGATTGCTTATTGTTGAGCAAATCTCAAGCCTTCATGCAACATGGGTTGTATTTGATAAGTAA

Coding sequence (CDS)

ATGGCAGGGGCTGGAAACGAAGACATGGAGGATGATACGCCAACCCCAACCCCAACTCAAACTCCAACTCCAACACCAACACCAACACCGACTTTGAGCTCAACATCAGAGGCTGCAAGTAGACATGTAGTGGTCGTCATGGATGGAATGGAAGAGTTCACAACGGACCCACTTAAGTGGGCATTGGACAACGTCATTAAGCCTGGTTGCATCGTTACTCTTGTTGGTGCAATGCCGTGGCTCAATATTCCTCTCTCATCAAAAACTTGGTTGGATATTTGGCCAATAAATTTGGAGGAGATGTCCTTTGAGGGAGTGGAAAGAGAGTATATTAGTGAAGCCAAATATGCAAAACTTGAAGCTGTGGTATCACTCTGTAGGAAATATGGGGTTGTGCCACAAAAGAAAGTAGTAATGGGTCATCCACTTAGATTGCTTATTGTTGAGCAAATCTCAAGCCTTCATGCAACATGGGTTGTATTTGATAAGTAA

Protein sequence

MAGAGNEDMEDDTPTPTPTQTPTPTPTPTPTLSSTSEAASRHVVVVMDGMEEFTTDPLKWALDNVIKPGCIVTLVGAMPWLNIPLSSKTWLDIWPINLEEMSFEGVEREYISEAKYAKLEAVVSLCRKYGVVPQKKVVMGHPLRLLIVEQISSLHATWVVFDK*

Homology

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BLAST of CSPI03G01620 vs. ExPASy Swiss-Prot
Match: Q54G14 (Uncharacterized protein DDB_G0290685 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0290685 PE=2 SV=2)

HSP 1 Score: 45.1 bits (105), Expect = 9.2e-04
Identity = 40/128 (31.25%), Postives = 60/128 (46.88%), Query Frame = 0


Query: 13  TPTPTPTQTPTPTPTPTPTLSSTSEAASRHVVVVMDGMEEFTTDPLKWALDNVIKPGCIV 72
           TPTPTPT TPTPTPTPTPT ++T+    +            TT P K + +   KPG   
Sbjct: 267 TPTPTPTPTPTPTPTPTPTTTTTTTTTPKPTTTT---TTTSTTTPTKTSTNTNDKPGIFE 326

Query: 73  TLVG----AMPWLNIPLSSKTWLDIWPINLEEMSFEGVEREYISEAKYAKLEAVVSLCRK 132
           T+ G        LN P+   T   I+   +E++   G   +   E   A    + +  + 
Sbjct: 327 TVGGGSGKVADALN-PIRIVTGGAIFSDTMEKIG--GGSGKLADEGVEAVGSGISNFAQS 386

Query: 133 YGVVPQKK 137
            G++P+K+
Sbjct: 387 VGIIPKKQ 388

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BLAST of CSPI03G01620 vs. ExPASy TrEMBL
Match: A0A0A0L195 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G011090 PE=4 SV=1)

HSP 1 Score: 327.0 bits (837), Expect = 4.5e-86
Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0


Query: 1   MAGAGNEDMEDDTPTPTPTQTPTPTPTPTPTLSSTSEAASRHVVVVMDGMEEFTTDPLKW 60
           MAGAGNEDMEDDTPTPTPTQTPTPTPTPTPTLSSTSEAASRHVVVVMDGMEEFTTDPLKW
Sbjct: 1   MAGAGNEDMEDDTPTPTPTQTPTPTPTPTPTLSSTSEAASRHVVVVMDGMEEFTTDPLKW 60

Query: 61  ALDNVIKPGCIVTLVGAMPWLNIPLSSKTWLDIWPINLEEMSFEGVEREYISEAKYAKLE 120
           ALDNVIKPGCIVTLVGAMPWLNIPLSSKTWLDIWPINLEEMSFEGVEREYISEAKYAKLE
Sbjct: 61  ALDNVIKPGCIVTLVGAMPWLNIPLSSKTWLDIWPINLEEMSFEGVEREYISEAKYAKLE 120

Query: 121 AVVSLCRKYGVVPQKKVVMGHPLRLLIVEQISSLHATWVVFDK 164
           AVVSLCRKYGVVPQKKVVMGHPLRLLIVEQISSLHATWVVFDK
Sbjct: 121 AVVSLCRKYGVVPQKKVVMGHPLRLLIVEQISSLHATWVVFDK 163

[Close]

BLAST of CSPI03G01620 vs. ExPASy TrEMBL
Match: A0A1S3BJN1 (uncharacterized protein LOC103490778 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490778 PE=4 SV=1)

HSP 1 Score: 293.5 bits (750), Expect = 5.5e-76
Identity = 148/163 (90.80%), Postives = 153/163 (93.87%), Query Frame = 0


Query: 1   MAGAGNEDMEDDTPTPTPTQTPTPTPTPTPTLSSTSEAASRHVVVVMDGMEEFTTDPLKW 60
           MAGAGNEDMEDD        T TPTPTPTPTLSSTSEAA+RHVVVVMDGMEEFTT PL+W
Sbjct: 1   MAGAGNEDMEDD--------TRTPTPTPTPTLSSTSEAANRHVVVVMDGMEEFTTHPLEW 60

Query: 61  ALDNVIKPGCIVTLVGAMPWLNIPLSSKTWLDIWPINLEEMSFEGVEREYISEAKYAKLE 120
           ALDNVIKPGC+VTLVGAMPWLNIPLSSKTWLDIWPINLEEMSFEGVEREYISEAKYAKLE
Sbjct: 61  ALDNVIKPGCLVTLVGAMPWLNIPLSSKTWLDIWPINLEEMSFEGVEREYISEAKYAKLE 120

Query: 121 AVVSLCRKYGVVPQKKVVMGHPLRLLIVEQISSLHATWVVFDK 164
           AVVSLC+KYGVVPQKKVVMGHPLRLLIVE+ISSLHATWVVFDK
Sbjct: 121 AVVSLCKKYGVVPQKKVVMGHPLRLLIVEKISSLHATWVVFDK 155

[Close]

BLAST of CSPI03G01620 vs. ExPASy TrEMBL
Match: A0A5D3CIU8 (Ubiquitin carboxyl-terminal hydrolase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G001590 PE=3 SV=1)

HSP 1 Score: 287.7 bits (735), Expect = 3.0e-74
Identity = 145/160 (90.62%), Postives = 150/160 (93.75%), Query Frame = 0


Query: 4   AGNEDMEDDTPTPTPTQTPTPTPTPTPTLSSTSEAASRHVVVVMDGMEEFTTDPLKWALD 63
           AGNEDMEDD        T TPTPTPTPTLSSTSEAA+RHVVVVMDGMEEFTT PL+WALD
Sbjct: 653 AGNEDMEDD--------TRTPTPTPTPTLSSTSEAANRHVVVVMDGMEEFTTHPLEWALD 712

Query: 64  NVIKPGCIVTLVGAMPWLNIPLSSKTWLDIWPINLEEMSFEGVEREYISEAKYAKLEAVV 123
           NVIKPGC+VTLVGAMPWLNIPLSSKTWLDIWPINLEEMSFEGVEREYISEAKYAKLEAVV
Sbjct: 713 NVIKPGCLVTLVGAMPWLNIPLSSKTWLDIWPINLEEMSFEGVEREYISEAKYAKLEAVV 772

Query: 124 SLCRKYGVVPQKKVVMGHPLRLLIVEQISSLHATWVVFDK 164
           SLC+KYGVVPQKKVVMGHPLRLLIVE+ISSLHATWVVFDK
Sbjct: 773 SLCKKYGVVPQKKVVMGHPLRLLIVEKISSLHATWVVFDK 804

[Close]

BLAST of CSPI03G01620 vs. ExPASy TrEMBL
Match: A0A1S3BKA1 (uncharacterized protein LOC103490778 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103490778 PE=4 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 3.1e-71
Identity = 140/155 (90.32%), Postives = 145/155 (93.55%), Query Frame = 0


Query: 9   MEDDTPTPTPTQTPTPTPTPTPTLSSTSEAASRHVVVVMDGMEEFTTDPLKWALDNVIKP 68
           MEDD        T TPTPTPTPTLSSTSEAA+RHVVVVMDGMEEFTT PL+WALDNVIKP
Sbjct: 1   MEDD--------TRTPTPTPTPTLSSTSEAANRHVVVVMDGMEEFTTHPLEWALDNVIKP 60

Query: 69  GCIVTLVGAMPWLNIPLSSKTWLDIWPINLEEMSFEGVEREYISEAKYAKLEAVVSLCRK 128
           GC+VTLVGAMPWLNIPLSSKTWLDIWPINLEEMSFEGVEREYISEAKYAKLEAVVSLC+K
Sbjct: 61  GCLVTLVGAMPWLNIPLSSKTWLDIWPINLEEMSFEGVEREYISEAKYAKLEAVVSLCKK 120

Query: 129 YGVVPQKKVVMGHPLRLLIVEQISSLHATWVVFDK 164
           YGVVPQKKVVMGHPLRLLIVE+ISSLHATWVVFDK
Sbjct: 121 YGVVPQKKVVMGHPLRLLIVEKISSLHATWVVFDK 147

[Close]

BLAST of CSPI03G01620 vs. ExPASy TrEMBL
Match: A0A6J1L5D0 (uncharacterized protein LOC111500162 OS=Cucurbita maxima OX=3661 GN=LOC111500162 PE=4 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 2.6e-62
Identity = 124/163 (76.07%), Postives = 137/163 (84.05%), Query Frame = 0


Query: 1   MAGAGNEDMEDDTPTPTPTQTPTPTPTPTPTLSSTSEAASRHVVVVMDGMEEFTTDPLKW 60
           MA AG+E M DD            TPTPTP+ SS+SEAA+RH+VVVMDGMEEFTT PL+W
Sbjct: 1   MAEAGDEAMGDD---------DMATPTPTPSFSSSSEAANRHIVVVMDGMEEFTTKPLEW 60

Query: 61  ALDNVIKPGCIVTLVGAMPWLNIPLSSKTWLDIWPINLEEMSFEGVEREYISEAKYAKLE 120
           ALDN+IKPGC+VTL+GAMPWLNIPLSSKTWLDIWP NLEEM F   ERE I+E KYAKLE
Sbjct: 61  ALDNIIKPGCVVTLIGAMPWLNIPLSSKTWLDIWPFNLEEMPFVRGERECITEPKYAKLE 120

Query: 121 AVVSLCRKYGVVPQKKVVMGHPLRLLIVEQISSLHATWVVFDK 164
           AV+SLC +YGVVPQKKV+MGHPLRLLIVEQIS LHATWVVFDK
Sbjct: 121 AVLSLCTQYGVVPQKKVIMGHPLRLLIVEQISGLHATWVVFDK 154

[Close]

BLAST of CSPI03G01620 vs. NCBI nr
Match: XP_011652714.1 (uncharacterized protein DDB_G0290685 isoform X1 [Cucumis sativus] >KAE8650025.1 hypothetical protein Csa_010541 [Cucumis sativus])

HSP 1 Score: 327.0 bits (837), Expect = 9.2e-86
Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0


Query: 1   MAGAGNEDMEDDTPTPTPTQTPTPTPTPTPTLSSTSEAASRHVVVVMDGMEEFTTDPLKW 60
           MAGAGNEDMEDDTPTPTPTQTPTPTPTPTPTLSSTSEAASRHVVVVMDGMEEFTTDPLKW
Sbjct: 1   MAGAGNEDMEDDTPTPTPTQTPTPTPTPTPTLSSTSEAASRHVVVVMDGMEEFTTDPLKW 60

Query: 61  ALDNVIKPGCIVTLVGAMPWLNIPLSSKTWLDIWPINLEEMSFEGVEREYISEAKYAKLE 120
           ALDNVIKPGCIVTLVGAMPWLNIPLSSKTWLDIWPINLEEMSFEGVEREYISEAKYAKLE
Sbjct: 61  ALDNVIKPGCIVTLVGAMPWLNIPLSSKTWLDIWPINLEEMSFEGVEREYISEAKYAKLE 120

Query: 121 AVVSLCRKYGVVPQKKVVMGHPLRLLIVEQISSLHATWVVFDK 164
           AVVSLCRKYGVVPQKKVVMGHPLRLLIVEQISSLHATWVVFDK
Sbjct: 121 AVVSLCRKYGVVPQKKVVMGHPLRLLIVEQISSLHATWVVFDK 163

[Close]

BLAST of CSPI03G01620 vs. NCBI nr
Match: XP_031738982.1 (uncharacterized protein DDB_G0290685 isoform X2 [Cucumis sativus])

HSP 1 Score: 310.8 bits (795), Expect = 6.8e-81
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0


Query: 9   MEDDTPTPTPTQTPTPTPTPTPTLSSTSEAASRHVVVVMDGMEEFTTDPLKWALDNVIKP 68
           MEDDTPTPTPTQTPTPTPTPTPTLSSTSEAASRHVVVVMDGMEEFTTDPLKWALDNVIKP
Sbjct: 1   MEDDTPTPTPTQTPTPTPTPTPTLSSTSEAASRHVVVVMDGMEEFTTDPLKWALDNVIKP 60

Query: 69  GCIVTLVGAMPWLNIPLSSKTWLDIWPINLEEMSFEGVEREYISEAKYAKLEAVVSLCRK 128
           GCIVTLVGAMPWLNIPLSSKTWLDIWPINLEEMSFEGVEREYISEAKYAKLEAVVSLCRK
Sbjct: 61  GCIVTLVGAMPWLNIPLSSKTWLDIWPINLEEMSFEGVEREYISEAKYAKLEAVVSLCRK 120

Query: 129 YGVVPQKKVVMGHPLRLLIVEQISSLHATWVVFDK 164
           YGVVPQKKVVMGHPLRLLIVEQISSLHATWVVFDK
Sbjct: 121 YGVVPQKKVVMGHPLRLLIVEQISSLHATWVVFDK 155

[Close]

BLAST of CSPI03G01620 vs. NCBI nr
Match: XP_008448679.1 (PREDICTED: uncharacterized protein LOC103490778 isoform X1 [Cucumis melo])

HSP 1 Score: 293.5 bits (750), Expect = 1.1e-75
Identity = 148/163 (90.80%), Postives = 153/163 (93.87%), Query Frame = 0


Query: 1   MAGAGNEDMEDDTPTPTPTQTPTPTPTPTPTLSSTSEAASRHVVVVMDGMEEFTTDPLKW 60
           MAGAGNEDMEDD        T TPTPTPTPTLSSTSEAA+RHVVVVMDGMEEFTT PL+W
Sbjct: 1   MAGAGNEDMEDD--------TRTPTPTPTPTLSSTSEAANRHVVVVMDGMEEFTTHPLEW 60

Query: 61  ALDNVIKPGCIVTLVGAMPWLNIPLSSKTWLDIWPINLEEMSFEGVEREYISEAKYAKLE 120
           ALDNVIKPGC+VTLVGAMPWLNIPLSSKTWLDIWPINLEEMSFEGVEREYISEAKYAKLE
Sbjct: 61  ALDNVIKPGCLVTLVGAMPWLNIPLSSKTWLDIWPINLEEMSFEGVEREYISEAKYAKLE 120

Query: 121 AVVSLCRKYGVVPQKKVVMGHPLRLLIVEQISSLHATWVVFDK 164
           AVVSLC+KYGVVPQKKVVMGHPLRLLIVE+ISSLHATWVVFDK
Sbjct: 121 AVVSLCKKYGVVPQKKVVMGHPLRLLIVEKISSLHATWVVFDK 155

[Close]

BLAST of CSPI03G01620 vs. NCBI nr
Match: KAA0053040.1 (ubiquitin carboxyl-terminal hydrolase 20-like [Cucumis melo var. makuwa] >TYK11495.1 ubiquitin carboxyl-terminal hydrolase 20-like [Cucumis melo var. makuwa])

HSP 1 Score: 287.7 bits (735), Expect = 6.2e-74
Identity = 145/160 (90.62%), Postives = 150/160 (93.75%), Query Frame = 0


Query: 4   AGNEDMEDDTPTPTPTQTPTPTPTPTPTLSSTSEAASRHVVVVMDGMEEFTTDPLKWALD 63
           AGNEDMEDD        T TPTPTPTPTLSSTSEAA+RHVVVVMDGMEEFTT PL+WALD
Sbjct: 653 AGNEDMEDD--------TRTPTPTPTPTLSSTSEAANRHVVVVMDGMEEFTTHPLEWALD 712

Query: 64  NVIKPGCIVTLVGAMPWLNIPLSSKTWLDIWPINLEEMSFEGVEREYISEAKYAKLEAVV 123
           NVIKPGC+VTLVGAMPWLNIPLSSKTWLDIWPINLEEMSFEGVEREYISEAKYAKLEAVV
Sbjct: 713 NVIKPGCLVTLVGAMPWLNIPLSSKTWLDIWPINLEEMSFEGVEREYISEAKYAKLEAVV 772

Query: 124 SLCRKYGVVPQKKVVMGHPLRLLIVEQISSLHATWVVFDK 164
           SLC+KYGVVPQKKVVMGHPLRLLIVE+ISSLHATWVVFDK
Sbjct: 773 SLCKKYGVVPQKKVVMGHPLRLLIVEKISSLHATWVVFDK 804

[Close]

BLAST of CSPI03G01620 vs. NCBI nr
Match: XP_038903690.1 (uncharacterized protein LOC120090215 isoform X2 [Benincasa hispida])

HSP 1 Score: 285.8 bits (730), Expect = 2.3e-73
Identity = 143/163 (87.73%), Postives = 150/163 (92.02%), Query Frame = 0


Query: 1   MAGAGNEDMEDDTPTPTPTQTPTPTPTPTPTLSSTSEAASRHVVVVMDGMEEFTTDPLKW 60
           MA AGNE M DD        TPTPTPTPTPTLSS+SEAASRHVVVVMDGMEEFTT+PLKW
Sbjct: 1   MAEAGNEAMGDD--------TPTPTPTPTPTLSSSSEAASRHVVVVMDGMEEFTTEPLKW 60

Query: 61  ALDNVIKPGCIVTLVGAMPWLNIPLSSKTWLDIWPINLEEMSFEGVEREYISEAKYAKLE 120
           ALDNVIKPGC+VTL+GAMPWLNIPLSSKTWLDIWPINLEEMSFE  EREY+SEAKYAKLE
Sbjct: 61  ALDNVIKPGCVVTLIGAMPWLNIPLSSKTWLDIWPINLEEMSFERGEREYLSEAKYAKLE 120

Query: 121 AVVSLCRKYGVVPQKKVVMGHPLRLLIVEQISSLHATWVVFDK 164
           AV+SLCRKYGVVPQKKV+MGHPLRLLIVEQISSLHATWVVFDK
Sbjct: 121 AVISLCRKYGVVPQKKVIMGHPLRLLIVEQISSLHATWVVFDK 155

The following BLAST results are available for this feature:

BLAST of CSPI03G01620 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q54G14	9.2e-04	31.25	Uncharacterized protein DDB_G0290685 OS=Dictyostelium discoideum OX=44689 GN=DDB...	[more]

BLAST of CSPI03G01620 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L195	4.5e-86	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G011090 PE=4 SV=1	[more]
A0A1S3BJN1	5.5e-76	90.80	uncharacterized protein LOC103490778 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A5D3CIU8	3.0e-74	90.63	Ubiquitin carboxyl-terminal hydrolase OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A1S3BKA1	3.1e-71	90.32	uncharacterized protein LOC103490778 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1L5D0	2.6e-62	76.07	uncharacterized protein LOC111500162 OS=Cucurbita maxima OX=3661 GN=LOC111500162...	[more]

BLAST of CSPI03G01620 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011652714.1	9.2e-86	100.00	uncharacterized protein DDB_G0290685 isoform X1 [Cucumis sativus] >KAE8650025.1 ...	[more]
XP_031738982.1	6.8e-81	100.00	uncharacterized protein DDB_G0290685 isoform X2 [Cucumis sativus]	[more]
XP_008448679.1	1.1e-75	90.80	PREDICTED: uncharacterized protein LOC103490778 isoform X1 [Cucumis melo]	[more]
KAA0053040.1	6.2e-74	90.63	ubiquitin carboxyl-terminal hydrolase 20-like [Cucumis melo var. makuwa] >TYK114...	[more]
XP_038903690.1	2.3e-73	87.73	uncharacterized protein LOC120090215 isoform X2 [Benincasa hispida]	[more]

BLAST of CSPI03G01620 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014729	Rossmann-like alpha/beta/alpha sandwich fold	GENE3D	3.40.50.620	HUPs	coord: 31..162 e-value: 7.0E-5 score: 25.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..38
None	No IPR available	PANTHER	PTHR33563:SF9	SUBFAMILY NOT NAMED	coord: 34..163
None	No IPR available	SUPERFAMILY	52402	Adenine nucleotide alpha hydrolases-like	coord: 41..160
IPR002812	3-dehydroquinate synthase	PANTHER	PTHR33563	FAMILY NOT NAMED	coord: 34..163

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G01620.1	CSPI03G01620.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009073	aromatic amino acid family biosynthetic process
biological_process	GO:0005975	carbohydrate metabolic process
biological_process	GO:0008652	cellular amino acid biosynthetic process
biological_process	GO:0016310	phosphorylation
biological_process	GO:0016579	protein deubiquitination
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
molecular_function	GO:0003856	3-dehydroquinate synthase activity
molecular_function	GO:0042973	glucan endo-1,3-beta-D-glucosidase activity
molecular_function	GO:0016301	kinase activity
molecular_function	GO:0016491	oxidoreductase activity
molecular_function	GO:0004843	thiol-dependent deubiquitinase