CSPI03G01600 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI03G01600
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	glycine-rich cell wall structural protein 1.8-like
Location	Chr3: 1147292 .. 1147971 (+)
RNA-Seq Expression	CSPI03G01600
Synteny	CSPI03G01600

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCTCTCCATGGCTATCCTTAGAGCACTGTGCCTTGCCTTTCTTCTCTTTGTACGGTTAGGTTTAGCTTCGGCTACTAGAACTCTTCTTGATTATGATCCACGTACACGTCAATATGGTTATAATCGTCCTAGTCCAAGAGTAGGGTATGATCCTGGCCATCGTGATGAATCCTATGATAAGGCATACGGTGGAAGCTCTAGTAGAGGACATGGAATTGGAGACTCTGCTCTTGGAGGTTCTGGATACGAAGGTGGTGGAAGACACGATTATGGATATGGAGATCGACATAATGATCGTGGGGTTGGATATGGTAATTATGGTGGTGGATATGGAGGTGTAGGAGGACATGGTGGTGGTTATGGTAACAATGGTGGTGGAAACTATGGAGATCGTTATGGACCTTCTCTTGGAGGTTCAGGATATGGAAGTGGAGGAAAAGGAAGTGGCAACGGCTATGACGATCATTCTCGTGGAAATGGTGCACGTGACAATAGCTATGGAGATTCTCATGGACATGGAGGACGTGACAGTGGATATGGGAGTGGTGGAGGAGTTAGTGGTGGCTATGGTAATGGAGGAGTGCATGGAGGAGAGTATGATAATAGCAAAGGAAGTGGAGAAGAAAGAGGTTATGATGGTGGATATGCTGTTAAGAACTCCATCTCAAAGGGAAATTGA

mRNA sequence

TTCTCTCCATGGCTATCCTTAGAGCACTGTGCCTTGCCTTTCTTCTCTTTGTACGGTTAGGTTTAGCTTCGGCTACTAGAACTCTTCTTGATTATGATCCACGTACACGTCAATATGGTTATAATCGTCCTAGTCCAAGAGTAGGGTATGATCCTGGCCATCGTGATGAATCCTATGATAAGGCATACGGTGGAAGCTCTAGTAGAGGACATGGAATTGGAGACTCTGCTCTTGGAGGTTCTGGATACGAAGGTGGTGGAAGACACGATTATGGATATGGAGATCGACATAATGATCGTGGGGTTGGATATGGTAATTATGGTGGTGGATATGGAGGTGTAGGAGGACATGGTGGTGGTTATGGTAACAATGGTGGTGGAAACTATGGAGATCGTTATGGACCTTCTCTTGGAGGTTCAGGATATGGAAGTGGAGGAAAAGGAAGTGGCAACGGCTATGACGATCATTCTCGTGGAAATGGTGCACGTGACAATAGCTATGGAGATTCTCATGGACATGGAGGACGTGACAGTGGATATGGGAGTGGTGGAGGAGTTAGTGGTGGCTATGGTAATGGAGGAGTGCATGGAGGAGAGTATGATAATAGCAAAGGAAGTGGAGAAGAAAGAGGTTATGATGGTGGATATGCTGTTAAGAACTCCATCTCAAAGGGAAATTGA

Coding sequence (CDS)

ATGGCTATCCTTAGAGCACTGTGCCTTGCCTTTCTTCTCTTTGTACGGTTAGGTTTAGCTTCGGCTACTAGAACTCTTCTTGATTATGATCCACGTACACGTCAATATGGTTATAATCGTCCTAGTCCAAGAGTAGGGTATGATCCTGGCCATCGTGATGAATCCTATGATAAGGCATACGGTGGAAGCTCTAGTAGAGGACATGGAATTGGAGACTCTGCTCTTGGAGGTTCTGGATACGAAGGTGGTGGAAGACACGATTATGGATATGGAGATCGACATAATGATCGTGGGGTTGGATATGGTAATTATGGTGGTGGATATGGAGGTGTAGGAGGACATGGTGGTGGTTATGGTAACAATGGTGGTGGAAACTATGGAGATCGTTATGGACCTTCTCTTGGAGGTTCAGGATATGGAAGTGGAGGAAAAGGAAGTGGCAACGGCTATGACGATCATTCTCGTGGAAATGGTGCACGTGACAATAGCTATGGAGATTCTCATGGACATGGAGGACGTGACAGTGGATATGGGAGTGGTGGAGGAGTTAGTGGTGGCTATGGTAATGGAGGAGTGCATGGAGGAGAGTATGATAATAGCAAAGGAAGTGGAGAAGAAAGAGGTTATGATGGTGGATATGCTGTTAAGAACTCCATCTCAAAGGGAAATTGA

Protein sequence

MAILRALCLAFLLFVRLGLASATRTLLDYDPRTRQYGYNRPSPRVGYDPGHRDESYDKAYGGSSSRGHGIGDSALGGSGYEGGGRHDYGYGDRHNDRGVGYGNYGGGYGGVGGHGGGYGNNGGGNYGDRYGPSLGGSGYGSGGKGSGNGYDDHSRGNGARDNSYGDSHGHGGRDSGYGSGGGVSGGYGNGGVHGGEYDNSKGSGEERGYDGGYAVKNSISKGN*

Homology

[Close]

BLAST of CSPI03G01600 vs. ExPASy Swiss-Prot
Match: P10495 (Glycine-rich cell wall structural protein 1.0 OS=Phaseolus vulgaris OX=3885 PE=2 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 2.5e-04
Identity = 69/158 (43.67%), Postives = 77/158 (48.73%), Query Frame = 0


Query: 61  GGSSSRGHGIGDSALGGSGYEGGGRHDYGYGDRHNDRGVGYGNYGGGYGGVGGHGGGYGN 120
           GG+   G+G G    GG GY GGG +  GYG        G G+ GGG GG GG G GYG 
Sbjct: 100 GGADGGGYGGGAGKGGGEGYGGGGANGGGYGG-------GGGSGGGGGGGAGGAGSGYGG 159

Query: 121 NGGGNYGDRYGPSLGGSGYGSGGKGSGNGYDDHSRG--NGARDNSYGDSHGHGG---RDS 180
             G   G  YG + GG G G+GG G G     H  G   G      G   G+GG      
Sbjct: 160 GEGSGAGGGYGGANGGGGGGNGGGGGGGSGGAHGGGAAGGGEGAGQGAGGGYGGGAAGGG 219

Query: 181 GYGSGGGVSGGYGNGGVHGGEYDNSKGSGEERGYDGGY 214
           G GSGGG  GGYG GG  G  Y    GSGE  G+ GGY
Sbjct: 220 GRGSGGGGGGGYGGGGARGSGYGGGGGSGEGGGHGGGY 250

[Close]

BLAST of CSPI03G01600 vs. ExPASy TrEMBL
Match: A0A0A0L1V3 (Glycine-rich protein-1 OS=Cucumis sativus OX=3659 GN=Csa_3G011070 PE=4 SV=1)

HSP 1 Score: 389.8 bits (1000), Expect = 7.6e-105
Identity = 216/223 (96.86%), Postives = 219/223 (98.21%), Query Frame = 0


Query: 1   MAILRALCLAFLLFVRLGLASATRTLLDYDPRTRQYGYNRPSPRVGYDPGHRDESYDKAY 60
           MAILRALCLAFLLFVRLGLASATRTLLDYDPRT QYGY+RPSPRVGYDPGH DESYDKAY
Sbjct: 1   MAILRALCLAFLLFVRLGLASATRTLLDYDPRTLQYGYDRPSPRVGYDPGHGDESYDKAY 60

Query: 61  GGSSSRGHGIGDSALGGSGYEGGGRHDYGYGDRHNDRGVGYGNYGGGYGGVGGHGGGYGN 120
           GGSSSRGHGIGDSALGGSGYEGGGRHDYGYGDRHNDRGVGYGNYGGGYGGVGGHG GYGN
Sbjct: 61  GGSSSRGHGIGDSALGGSGYEGGGRHDYGYGDRHNDRGVGYGNYGGGYGGVGGHGDGYGN 120

Query: 121 NGGGNYGDRYGPSLGGSGYGSGGKGSGNGYDDHSRGNGARDNSYGDSHGHGGRDSGYGSG 180
           NGGG+YGDRYGPSLGGSGYGSGGKGSGNGYDDHSRGNGARDNSYGDSHGHGGRDSGYGSG
Sbjct: 121 NGGGSYGDRYGPSLGGSGYGSGGKGSGNGYDDHSRGNGARDNSYGDSHGHGGRDSGYGSG 180

Query: 181 GGVSGGYGNGGVHGGEYDNSKGSGEERGYDGGYAVKNSISKGN 224
           GGV+GGYGNGGVHGGEYDNSKGSGEE GYDGGYAVKNSISKGN
Sbjct: 181 GGVTGGYGNGGVHGGEYDNSKGSGEEGGYDGGYAVKNSISKGN 223

[Close]

BLAST of CSPI03G01600 vs. ExPASy TrEMBL
Match: A0A5A7UHU2 (Glycine-rich cell wall structural protein 1.8-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G001580 PE=4 SV=1)

HSP 1 Score: 354.0 bits (907), Expect = 4.6e-94
Identity = 205/224 (91.52%), Postives = 209/224 (93.30%), Query Frame = 0


Query: 1   MAILRALCLAFLLFVRLGLASATRTLLDYDPRTRQYGYNRPSPRVGYDPGHRDESYDKAY 60
           MAILRALCLAFLLFV LGLASATRTLLDYDPRTR YGY+RPSPRVGYDPGHRDESYD AY
Sbjct: 1   MAILRALCLAFLLFVGLGLASATRTLLDYDPRTRHYGYDRPSPRVGYDPGHRDESYDNAY 60

Query: 61  GGSSSRGHGIGDSALGGSGYEGGGRHDYGYGDRHNDRGVGYGNYGGGYGGVGGHGGGYGN 120
           GGSSSRGHGIGDSALGGSGYEGGGR DYGYGDR+++RGVGYGN GGGYGGVGGHG GYGN
Sbjct: 61  GGSSSRGHGIGDSALGGSGYEGGGRRDYGYGDRNDNRGVGYGN-GGGYGGVGGHGDGYGN 120

Query: 121 NGGGNYGDRYGPSLGGSGYGSGGKGSGNGYDD-HSRGNGARDNSYGDSHGHGGRDSGYGS 180
           NGGG YGDRYGPSLGGSGYGSGGKGS NGYDD HS G G RDN YGDSHGH GRDSGYGS
Sbjct: 121 NGGGGYGDRYGPSLGGSGYGSGGKGSDNGYDDRHSHGYGGRDNGYGDSHGHEGRDSGYGS 180

Query: 181 GGGVSGGYGNGGVHGGEYDNSKGSGEERGYDGGYAVKNSISKGN 224
           GGGVSGGYGNGGVHGGEYDNSKGSGEE GYDGGYAVKNSISKGN
Sbjct: 181 GGGVSGGYGNGGVHGGEYDNSKGSGEEGGYDGGYAVKNSISKGN 223

[Close]

BLAST of CSPI03G01600 vs. ExPASy TrEMBL
Match: A0A1S3BMC4 (glycine-rich cell wall structural protein 1.8-like OS=Cucumis melo OX=3656 GN=LOC103491115 PE=4 SV=1)

HSP 1 Score: 354.0 bits (907), Expect = 4.6e-94
Identity = 205/224 (91.52%), Postives = 209/224 (93.30%), Query Frame = 0


Query: 1   MAILRALCLAFLLFVRLGLASATRTLLDYDPRTRQYGYNRPSPRVGYDPGHRDESYDKAY 60
           MAILRALCLAFLLFV LGLASATRTLLDYDPRTR YGY+RPSPRVGYDPGHRDESYD AY
Sbjct: 1   MAILRALCLAFLLFVGLGLASATRTLLDYDPRTRHYGYDRPSPRVGYDPGHRDESYDNAY 60

Query: 61  GGSSSRGHGIGDSALGGSGYEGGGRHDYGYGDRHNDRGVGYGNYGGGYGGVGGHGGGYGN 120
           GGSSSRGHGIGDSALGGSGYEGGGR DYGYGDR+++RGVGYGN GGGYGGVGGHG GYGN
Sbjct: 61  GGSSSRGHGIGDSALGGSGYEGGGRRDYGYGDRNDNRGVGYGN-GGGYGGVGGHGDGYGN 120

Query: 121 NGGGNYGDRYGPSLGGSGYGSGGKGSGNGYDD-HSRGNGARDNSYGDSHGHGGRDSGYGS 180
           NGGG YGDRYGPSLGGSGYGSGGKGS NGYDD HS G G RDN YGDSHGH GRDSGYGS
Sbjct: 121 NGGGGYGDRYGPSLGGSGYGSGGKGSDNGYDDRHSHGYGGRDNGYGDSHGHEGRDSGYGS 180

Query: 181 GGGVSGGYGNGGVHGGEYDNSKGSGEERGYDGGYAVKNSISKGN 224
           GGGVSGGYGNGGVHGGEYDNSKGSGEE GYDGGYAVKNSISKGN
Sbjct: 181 GGGVSGGYGNGGVHGGEYDNSKGSGEEGGYDGGYAVKNSISKGN 223

[Close]

BLAST of CSPI03G01600 vs. ExPASy TrEMBL
Match: A0A5A7UEU3 (Glycine-rich cell wall structural protein 1.0-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G001560 PE=4 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 3.3e-76
Identity = 188/293 (64.16%), Postives = 200/293 (68.26%), Query Frame = 0


Query: 1   MAILRALCLAFLLFVRLGLASATRTLLDYDPRTRQYGYNRPSPRVGYDPGHRDESYDKAY 60
           MAI RALC++FLLFV LGLASA RTLLDYDPRTR+Y Y+ P+PRVGYDP HRD+SYD AY
Sbjct: 1   MAISRALCISFLLFVCLGLASAARTLLDYDPRTRRYDYDHPTPRVGYDPSHRDQSYDNAY 60

Query: 61  GGSSSRGHGIGDSALGGSG-YEGGGRHDYGYGDRHNDRGVGYG----------------- 120
           GGSS+RG+G+GDSALGGSG YEGGG HDYGYG R++DRGVGYG                 
Sbjct: 61  GGSSNRGYGVGDSALGGSGRYEGGGGHDYGYGGRNDDRGVGYGGRNDDHGAGYGAGYGGR 120

Query: 121 ----------------------------------------------------NYGGGYGG 180
                                                                 GGGYGG
Sbjct: 121 NDDRGAGYGGRNDDRGAGYGRRNDDHGAGYGGRNDDRGAGYGGRNDDRGVGYGNGGGYGG 180

Query: 181 VGGHGGGYGNNGGGNYGDRYGPSLGGSGYGSGGKGSGNGYDDHSRGNGARDNSYGDSHGH 224
           VGGHG GYGNN GG YGDRY PSLGGSGYG+GGKGSGNGYDDHSRG G  DN YGDSHGH
Sbjct: 181 VGGHGDGYGNNVGGGYGDRYSPSLGGSGYGNGGKGSGNGYDDHSRGYGGHDNGYGDSHGH 240

[Close]

BLAST of CSPI03G01600 vs. ExPASy TrEMBL
Match: A0A1S3BM26 (glycine-rich cell wall structural protein 1.0-like OS=Cucumis melo OX=3656 GN=LOC103491114 PE=4 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 3.3e-76
Identity = 188/293 (64.16%), Postives = 200/293 (68.26%), Query Frame = 0


Query: 1   MAILRALCLAFLLFVRLGLASATRTLLDYDPRTRQYGYNRPSPRVGYDPGHRDESYDKAY 60
           MAI RALC++FLLFV LGLASA RTLLDYDPRTR+Y Y+ P+PRVGYDP HRD+SYD AY
Sbjct: 1   MAISRALCISFLLFVCLGLASAARTLLDYDPRTRRYDYDHPTPRVGYDPSHRDQSYDNAY 60

Query: 61  GGSSSRGHGIGDSALGGSG-YEGGGRHDYGYGDRHNDRGVGYG----------------- 120
           GGSS+RG+G+GDSALGGSG YEGGG HDYGYG R++DRGVGYG                 
Sbjct: 61  GGSSNRGYGVGDSALGGSGRYEGGGGHDYGYGGRNDDRGVGYGGRNDDHGAGYGAGYGGR 120

Query: 121 ----------------------------------------------------NYGGGYGG 180
                                                                 GGGYGG
Sbjct: 121 NDDRGAGYGGRNDDRGAGYGRRNDDHGAGYGGRNDDRGAGYGGRNDDRGVGYGNGGGYGG 180

Query: 181 VGGHGGGYGNNGGGNYGDRYGPSLGGSGYGSGGKGSGNGYDDHSRGNGARDNSYGDSHGH 224
           VGGHG GYGNN GG YGDRY PSLGGSGYG+GGKGSGNGYDDHSRG G  DN YGDSHGH
Sbjct: 181 VGGHGDGYGNNVGGGYGDRYSPSLGGSGYGNGGKGSGNGYDDHSRGYGGHDNGYGDSHGH 240

[Close]

BLAST of CSPI03G01600 vs. NCBI nr
Match: KAE8650024.1 (hypothetical protein Csa_011560 [Cucumis sativus])

HSP 1 Score: 389.8 bits (1000), Expect = 1.6e-104
Identity = 216/223 (96.86%), Postives = 219/223 (98.21%), Query Frame = 0


Query: 1   MAILRALCLAFLLFVRLGLASATRTLLDYDPRTRQYGYNRPSPRVGYDPGHRDESYDKAY 60
           MAILRALCLAFLLFVRLGLASATRTLLDYDPRT QYGY+RPSPRVGYDPGH DESYDKAY
Sbjct: 16  MAILRALCLAFLLFVRLGLASATRTLLDYDPRTLQYGYDRPSPRVGYDPGHGDESYDKAY 75

Query: 61  GGSSSRGHGIGDSALGGSGYEGGGRHDYGYGDRHNDRGVGYGNYGGGYGGVGGHGGGYGN 120
           GGSSSRGHGIGDSALGGSGYEGGGRHDYGYGDRHNDRGVGYGNYGGGYGGVGGHG GYGN
Sbjct: 76  GGSSSRGHGIGDSALGGSGYEGGGRHDYGYGDRHNDRGVGYGNYGGGYGGVGGHGDGYGN 135

Query: 121 NGGGNYGDRYGPSLGGSGYGSGGKGSGNGYDDHSRGNGARDNSYGDSHGHGGRDSGYGSG 180
           NGGG+YGDRYGPSLGGSGYGSGGKGSGNGYDDHSRGNGARDNSYGDSHGHGGRDSGYGSG
Sbjct: 136 NGGGSYGDRYGPSLGGSGYGSGGKGSGNGYDDHSRGNGARDNSYGDSHGHGGRDSGYGSG 195

Query: 181 GGVSGGYGNGGVHGGEYDNSKGSGEERGYDGGYAVKNSISKGN 224
           GGV+GGYGNGGVHGGEYDNSKGSGEE GYDGGYAVKNSISKGN
Sbjct: 196 GGVTGGYGNGGVHGGEYDNSKGSGEEGGYDGGYAVKNSISKGN 238

[Close]

BLAST of CSPI03G01600 vs. NCBI nr
Match: XP_011652712.1 (glycine-rich cell wall structural protein 2 [Cucumis sativus])

HSP 1 Score: 389.8 bits (1000), Expect = 1.6e-104
Identity = 216/223 (96.86%), Postives = 219/223 (98.21%), Query Frame = 0


Query: 1   MAILRALCLAFLLFVRLGLASATRTLLDYDPRTRQYGYNRPSPRVGYDPGHRDESYDKAY 60
           MAILRALCLAFLLFVRLGLASATRTLLDYDPRT QYGY+RPSPRVGYDPGH DESYDKAY
Sbjct: 1   MAILRALCLAFLLFVRLGLASATRTLLDYDPRTLQYGYDRPSPRVGYDPGHGDESYDKAY 60

Query: 61  GGSSSRGHGIGDSALGGSGYEGGGRHDYGYGDRHNDRGVGYGNYGGGYGGVGGHGGGYGN 120
           GGSSSRGHGIGDSALGGSGYEGGGRHDYGYGDRHNDRGVGYGNYGGGYGGVGGHG GYGN
Sbjct: 61  GGSSSRGHGIGDSALGGSGYEGGGRHDYGYGDRHNDRGVGYGNYGGGYGGVGGHGDGYGN 120

Query: 121 NGGGNYGDRYGPSLGGSGYGSGGKGSGNGYDDHSRGNGARDNSYGDSHGHGGRDSGYGSG 180
           NGGG+YGDRYGPSLGGSGYGSGGKGSGNGYDDHSRGNGARDNSYGDSHGHGGRDSGYGSG
Sbjct: 121 NGGGSYGDRYGPSLGGSGYGSGGKGSGNGYDDHSRGNGARDNSYGDSHGHGGRDSGYGSG 180

Query: 181 GGVSGGYGNGGVHGGEYDNSKGSGEERGYDGGYAVKNSISKGN 224
           GGV+GGYGNGGVHGGEYDNSKGSGEE GYDGGYAVKNSISKGN
Sbjct: 181 GGVTGGYGNGGVHGGEYDNSKGSGEEGGYDGGYAVKNSISKGN 223

[Close]

BLAST of CSPI03G01600 vs. NCBI nr
Match: XP_008449165.1 (PREDICTED: glycine-rich cell wall structural protein 1.8-like [Cucumis melo] >KAA0053039.1 glycine-rich cell wall structural protein 1.8-like [Cucumis melo var. makuwa] >TYK11494.1 glycine-rich cell wall structural protein 1.8-like [Cucumis melo var. makuwa])

HSP 1 Score: 354.0 bits (907), Expect = 9.6e-94
Identity = 205/224 (91.52%), Postives = 209/224 (93.30%), Query Frame = 0


Query: 1   MAILRALCLAFLLFVRLGLASATRTLLDYDPRTRQYGYNRPSPRVGYDPGHRDESYDKAY 60
           MAILRALCLAFLLFV LGLASATRTLLDYDPRTR YGY+RPSPRVGYDPGHRDESYD AY
Sbjct: 1   MAILRALCLAFLLFVGLGLASATRTLLDYDPRTRHYGYDRPSPRVGYDPGHRDESYDNAY 60

Query: 61  GGSSSRGHGIGDSALGGSGYEGGGRHDYGYGDRHNDRGVGYGNYGGGYGGVGGHGGGYGN 120
           GGSSSRGHGIGDSALGGSGYEGGGR DYGYGDR+++RGVGYGN GGGYGGVGGHG GYGN
Sbjct: 61  GGSSSRGHGIGDSALGGSGYEGGGRRDYGYGDRNDNRGVGYGN-GGGYGGVGGHGDGYGN 120

Query: 121 NGGGNYGDRYGPSLGGSGYGSGGKGSGNGYDD-HSRGNGARDNSYGDSHGHGGRDSGYGS 180
           NGGG YGDRYGPSLGGSGYGSGGKGS NGYDD HS G G RDN YGDSHGH GRDSGYGS
Sbjct: 121 NGGGGYGDRYGPSLGGSGYGSGGKGSDNGYDDRHSHGYGGRDNGYGDSHGHEGRDSGYGS 180

Query: 181 GGGVSGGYGNGGVHGGEYDNSKGSGEERGYDGGYAVKNSISKGN 224
           GGGVSGGYGNGGVHGGEYDNSKGSGEE GYDGGYAVKNSISKGN
Sbjct: 181 GGGVSGGYGNGGVHGGEYDNSKGSGEEGGYDGGYAVKNSISKGN 223

[Close]

BLAST of CSPI03G01600 vs. NCBI nr
Match: KAE8650023.1 (hypothetical protein Csa_011563 [Cucumis sativus])

HSP 1 Score: 301.2 bits (770), Expect = 7.4e-78
Identity = 184/256 (71.88%), Postives = 198/256 (77.34%), Query Frame = 0


Query: 1   MAILRALCLAFLLFVRLGLASATRTLLDYDPRTRQYGYNRPSPRVGYDPGHRDESYDKAY 60
           MAI + LC+ FLLFV LGLASA RTLLDYDPRTR+Y Y+ P+PRVGYDP HRD+SYD AY
Sbjct: 1   MAIPKVLCIGFLLFVGLGLASAARTLLDYDPRTRRYDYDHPTPRVGYDPSHRDQSYDSAY 60

Query: 61  GGSSSRGHGIGDSALGGSG-YEGGGRHDYGYGDRHNDRGVGYG----------------- 120
            GSSS+G+G+GDSALGGSG YEGGG  D GYG R++DRG GYG                 
Sbjct: 61  SGSSSKGYGVGDSALGGSGRYEGGGGRDSGYGGRNDDRGAGYGGRNDDHGAGYGSRNDDH 120

Query: 121 ---------------NYGGGYGGVGGHGGGYGNNGGGNYGDRYGPSLGGSGYGSGGKGSG 180
                            GGGYG VGGHG GYGNNGGG+YGDRYGPSLGGSGYGSGGKGSG
Sbjct: 121 GAGYGGRNDDRGVGYGNGGGYGSVGGHGDGYGNNGGGSYGDRYGPSLGGSGYGSGGKGSG 180

Query: 181 NGYDDHSRGNGARDNSYGDSHGHGGRDSGYGSGGGVSGGYGNGGVHGGEYDNSKGSGEER 224
           NGYDDHSRGNGARDN+YGDSHGH GRDSGYGSGGGVSGGYGNGGVHGGE+DNSKGSGEE 
Sbjct: 181 NGYDDHSRGNGARDNNYGDSHGHEGRDSGYGSGGGVSGGYGNGGVHGGEHDNSKGSGEEG 240

[Close]

BLAST of CSPI03G01600 vs. NCBI nr
Match: XP_008449164.1 (PREDICTED: glycine-rich cell wall structural protein 1.0-like [Cucumis melo] >KAA0053037.1 glycine-rich cell wall structural protein 1.0-like [Cucumis melo var. makuwa] >TYK11492.1 glycine-rich cell wall structural protein 1.0-like [Cucumis melo var. makuwa])

HSP 1 Score: 294.7 bits (753), Expect = 6.9e-76
Identity = 188/293 (64.16%), Postives = 200/293 (68.26%), Query Frame = 0


Query: 1   MAILRALCLAFLLFVRLGLASATRTLLDYDPRTRQYGYNRPSPRVGYDPGHRDESYDKAY 60
           MAI RALC++FLLFV LGLASA RTLLDYDPRTR+Y Y+ P+PRVGYDP HRD+SYD AY
Sbjct: 1   MAISRALCISFLLFVCLGLASAARTLLDYDPRTRRYDYDHPTPRVGYDPSHRDQSYDNAY 60

Query: 61  GGSSSRGHGIGDSALGGSG-YEGGGRHDYGYGDRHNDRGVGYG----------------- 120
           GGSS+RG+G+GDSALGGSG YEGGG HDYGYG R++DRGVGYG                 
Sbjct: 61  GGSSNRGYGVGDSALGGSGRYEGGGGHDYGYGGRNDDRGVGYGGRNDDHGAGYGAGYGGR 120

Query: 121 ----------------------------------------------------NYGGGYGG 180
                                                                 GGGYGG
Sbjct: 121 NDDRGAGYGGRNDDRGAGYGRRNDDHGAGYGGRNDDRGAGYGGRNDDRGVGYGNGGGYGG 180

Query: 181 VGGHGGGYGNNGGGNYGDRYGPSLGGSGYGSGGKGSGNGYDDHSRGNGARDNSYGDSHGH 224
           VGGHG GYGNN GG YGDRY PSLGGSGYG+GGKGSGNGYDDHSRG G  DN YGDSHGH
Sbjct: 181 VGGHGDGYGNNVGGGYGDRYSPSLGGSGYGNGGKGSGNGYDDHSRGYGGHDNGYGDSHGH 240

The following BLAST results are available for this feature:

BLAST of CSPI03G01600 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10495	2.5e-04	43.67	Glycine-rich cell wall structural protein 1.0 OS=Phaseolus vulgaris OX=3885 PE=2...	[more]

BLAST of CSPI03G01600 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L1V3	7.6e-105	96.86	Glycine-rich protein-1 OS=Cucumis sativus OX=3659 GN=Csa_3G011070 PE=4 SV=1	[more]
A0A5A7UHU2	4.6e-94	91.52	Glycine-rich cell wall structural protein 1.8-like OS=Cucumis melo var. makuwa O...	[more]
A0A1S3BMC4	4.6e-94	91.52	glycine-rich cell wall structural protein 1.8-like OS=Cucumis melo OX=3656 GN=LO...	[more]
A0A5A7UEU3	3.3e-76	64.16	Glycine-rich cell wall structural protein 1.0-like OS=Cucumis melo var. makuwa O...	[more]
A0A1S3BM26	3.3e-76	64.16	glycine-rich cell wall structural protein 1.0-like OS=Cucumis melo OX=3656 GN=LO...	[more]

BLAST of CSPI03G01600 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8650024.1	1.6e-104	96.86	hypothetical protein Csa_011560 [Cucumis sativus]	[more]
XP_011652712.1	1.6e-104	96.86	glycine-rich cell wall structural protein 2 [Cucumis sativus]	[more]
XP_008449165.1	9.6e-94	91.52	PREDICTED: glycine-rich cell wall structural protein 1.8-like [Cucumis melo] >KA...	[more]
KAE8650023.1	7.4e-78	71.88	hypothetical protein Csa_011563 [Cucumis sativus]	[more]
XP_008449164.1	6.9e-76	64.16	PREDICTED: glycine-rich cell wall structural protein 1.0-like [Cucumis melo] >KA...	[more]

BLAST of CSPI03G01600 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR01228	EGGSHELL	coord: 180..198 score: 36.84 coord: 4..20 score: 29.41 coord: 139..149 score: 55.68 coord: 112..127 score: 42.19
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 32..78
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 137..223

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G01600.1	CSPI03G01600.1	mRNA