CSPI03G01570 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI03G01570
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	glycine-rich cell wall structural protein 1.8-like
Location	Chr3: 1130861 .. 1131730 (+)
RNA-Seq Expression	CSPI03G01570
Synteny	CSPI03G01570

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTATTTCTAGAGTGTTGTGCATTGGCTTTCTTCTTTTTGTGGGGTTAGGGTTAGCTTCGGCAGCCCGAACTCTTCTTGATTATGATCCACGTGCACGCCGTTATGATTACGATCGTCCTACTCCAAGAGTAGGATACGATCCAAGCCATCGTGATCAATCCTATGATAATGTATATGGTGGAAGCTCTAGCAGAGGATATGGAGCTGGAGACTCTGCTCTTGGAGGTTCGGGACGATATGAAGGTGGTGGAGGACGTGATTACGGACATGGAGGCCGAAATGATGATCGTGGTGTTGGATATGGAGGTCGAAATGATGATCATGGTGCTGAATATGGAGGTAGAAATGATGATCATGGTGCTGGATATGGAAGTCGAAATGATGATCGTGGTGCTGGATATGGAAGTCGAAATGATGATCGTGGTGTTGGATATGGAAGTCGAAATGATGATCGTAGTGTTGGATATGGAGGCCGAAATGATGATCGTGGAGTTGGATATGGTAATGGTGGTGGATATGGAGGTGTAGGAGGACATGGTGATGGTTATGGTAACAATGGTGGTGGAAGCTATGGAGATCGTTATGGCCCTTCTCTTGGAGGTTCAGGATATGGAAGTGGAGGAAAAGGAAGTGGCAATGGCTATGACGATCATTCTCGTGGAAATGGTGCGCGTGACAATAGCTATGGAGATTCTCATGGACATGAAGGACGTGACAGTGGATATGGAAGTGGTGGAGGAGTTAGTGGAGGCTATGGCAATGGAGGAGTTCATGGAGGGGAGCATGATAATAGCAAAGGAAGTGGAGAAGAAGGGGGTAGCGACGGTGGATATGCTTTCAAAAATTCCATCTCAAAGGAGAATTGA

mRNA sequence

ATGGCTATTTCTAGAGTGTTGTGCATTGGCTTTCTTCTTTTTGTGGGGTTAGGGTTAGCTTCGGCAGCCCGAACTCTTCTTGATTATGATCCACGTGCACGCCGTTATGATTACGATCGTCCTACTCCAAGAGTAGGATACGATCCAAGCCATCGTGATCAATCCTATGATAATGTATATGGTGGAAGCTCTAGCAGAGGATATGGAGCTGGAGACTCTGCTCTTGGAGGTTCGGGACGATATGAAGGTGGTGGAGGACGTGATTACGGACATGGAGGCCGAAATGATGATCGTGGTGTTGGATATGGAGGTCGAAATGATGATCATGGTGCTGAATATGGAGGTAGAAATGATGATCATGGTGCTGGATATGGAAGTCGAAATGATGATCGTGGTGCTGGATATGGAAGTCGAAATGATGATCGTGGTGTTGGATATGGAAGTCGAAATGATGATCGTAGTGTTGGATATGGAGGCCGAAATGATGATCGTGGAGTTGGATATGGTAATGGTGGTGGATATGGAGGTGTAGGAGGACATGGTGATGGTTATGGTAACAATGGTGGTGGAAGCTATGGAGATCGTTATGGCCCTTCTCTTGGAGGTTCAGGATATGGAAGTGGAGGAAAAGGAAGTGGCAATGGCTATGACGATCATTCTCGTGGAAATGGTGCGCGTGACAATAGCTATGGAGATTCTCATGGACATGAAGGACGTGACAGTGGATATGGAAGTGGTGGAGGAGTTAGTGGAGGCTATGGCAATGGAGGAGTTCATGGAGGGGAGCATGATAATAGCAAAGGAAGTGGAGAAGAAGGGGGTAGCGACGGTGGATATGCTTTCAAAAATTCCATCTCAAAGGAGAATTGA

Coding sequence (CDS)

ATGGCTATTTCTAGAGTGTTGTGCATTGGCTTTCTTCTTTTTGTGGGGTTAGGGTTAGCTTCGGCAGCCCGAACTCTTCTTGATTATGATCCACGTGCACGCCGTTATGATTACGATCGTCCTACTCCAAGAGTAGGATACGATCCAAGCCATCGTGATCAATCCTATGATAATGTATATGGTGGAAGCTCTAGCAGAGGATATGGAGCTGGAGACTCTGCTCTTGGAGGTTCGGGACGATATGAAGGTGGTGGAGGACGTGATTACGGACATGGAGGCCGAAATGATGATCGTGGTGTTGGATATGGAGGTCGAAATGATGATCATGGTGCTGAATATGGAGGTAGAAATGATGATCATGGTGCTGGATATGGAAGTCGAAATGATGATCGTGGTGCTGGATATGGAAGTCGAAATGATGATCGTGGTGTTGGATATGGAAGTCGAAATGATGATCGTAGTGTTGGATATGGAGGCCGAAATGATGATCGTGGAGTTGGATATGGTAATGGTGGTGGATATGGAGGTGTAGGAGGACATGGTGATGGTTATGGTAACAATGGTGGTGGAAGCTATGGAGATCGTTATGGCCCTTCTCTTGGAGGTTCAGGATATGGAAGTGGAGGAAAAGGAAGTGGCAATGGCTATGACGATCATTCTCGTGGAAATGGTGCGCGTGACAATAGCTATGGAGATTCTCATGGACATGAAGGACGTGACAGTGGATATGGAAGTGGTGGAGGAGTTAGTGGAGGCTATGGCAATGGAGGAGTTCATGGAGGGGAGCATGATAATAGCAAAGGAAGTGGAGAAGAAGGGGGTAGCGACGGTGGATATGCTTTCAAAAATTCCATCTCAAAGGAGAATTGA

Protein sequence

MAISRVLCIGFLLFVGLGLASAARTLLDYDPRARRYDYDRPTPRVGYDPSHRDQSYDNVYGGSSSRGYGAGDSALGGSGRYEGGGGRDYGHGGRNDDRGVGYGGRNDDHGAEYGGRNDDHGAGYGSRNDDRGAGYGSRNDDRGVGYGSRNDDRSVGYGGRNDDRGVGYGNGGGYGGVGGHGDGYGNNGGGSYGDRYGPSLGGSGYGSGGKGSGNGYDDHSRGNGARDNSYGDSHGHEGRDSGYGSGGGVSGGYGNGGVHGGEHDNSKGSGEEGGSDGGYAFKNSISKEN*

Homology

[Close]

BLAST of CSPI03G01570 vs. ExPASy Swiss-Prot
Match: P10496 (Glycine-rich cell wall structural protein 1.8 OS=Phaseolus vulgaris OX=3885 PE=2 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 1.6e-06
Identity = 91/236 (38.56%), Postives = 111/236 (47.03%), Query Frame = 0


Query: 61  GGSSSRGYGAGDSALGGSGRYEGGG-GRDYG---------HGGRNDDRGVGYGGRNDDHG 120
           GG +  GYGAG    GG+G  +GGG G  YG          GG+    G GYG   +  G
Sbjct: 214 GGGAGGGYGAGGEHGGGAGGGQGGGAGGGYGAGGEHGGGAGGGQGGGAGGGYGAGGEHGG 273

Query: 121 AEYGGRNDDHGAGYGSRNDDRGAGYGSRNDDRGVGYGSRNDDRSVGYGGRNDDRGVGYG- 180
              GG+    G GYG+  +  G   G +    G GYG+  +    G GG+    G GY  
Sbjct: 274 GAGGGQGGGAGGGYGAGGEHGGGAGGGQGGGAGGGYGAGGEHGGGGGGGQGGGAGGGYAA 333

Query: 181 ---NGGGYGGVGGHGDGYGNNGGGSYGDRYGPSLG---GSGYGSGGKGSGNGYDDHSRGN 240
              +GGGYGG  G GDG G   GG +G  YG   G   G GYG+GG+  G GY     G 
Sbjct: 334 VGEHGGGYGGGQGGGDGGGYGTGGEHGGGYGGGQGGGAGGGYGTGGE-HGGGYGGGQGGG 393

Query: 241 GARDNSYGDSHGHEGRDSGYGSGGGVSGGYGNGGVHGGEHDNSKGSGEEGGSDGGY 280
           G      G  HG  G   G G GGG  GGYG+GG HGG +    G G   G+ G +
Sbjct: 394 GG--YGAGGDHGAAGYGGGEGGGGGSGGGYGDGGAHGGGYGGGAGGGGGYGAGGAH 446

[Close]

BLAST of CSPI03G01570 vs. ExPASy Swiss-Prot
Match: P10495 (Glycine-rich cell wall structural protein 1.0 OS=Phaseolus vulgaris OX=3885 PE=2 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 1.1e-04
Identity = 109/288 (37.85%), Postives = 125/288 (43.40%), Query Frame = 0


Query: 1   MAISRVLCIGFL-LFVGLGLASAARTLLDYDPRARRYDYDRPTPRVGYDPSHRDQSYDNV 60
           MA S+VL    L +FV  G+ SAARTLL  + R                         N+
Sbjct: 1   MATSKVLLSNVLFVFVCFGICSAARTLLTLEDRV------------------------NL 60

Query: 61  YGGSSSRGYGAGDSALGGSGRYE---GGGGRDYGHGGRNDDRGVGYGGRNDDHGAEYGGR 120
           + G+   GYG G  + GG G      GGGG   G GG  +  G GYG     HG   GG 
Sbjct: 61  HVGTVVGGYGGGGGSGGGGGGAAVELGGGGYGEGAGG-GEGAGAGYGAAGGGHG---GGG 120

Query: 121 NDDHGAGYGSRNDDRGAGYGSRNDDRGVGYGSRNDDRSVGYGGRNDDRGVGYGNGGGYGG 180
            +  G G G+     G G G +    G G G  N     GYGG     G G G GGG GG
Sbjct: 121 GNGGGGGGGADGGGYGGGAG-KGGGEGYGGGGANGG---GYGG-----GGGSGGGGG-GG 180

Query: 181 VGGHGDGYGNNGGGSYGDRYGPSLGGSGYGSGGKGSGNGYDDH-----SRGNGARDNSYG 240
            GG G GYG   G   G  YG + GG G G+GG G G     H       G GA   + G
Sbjct: 181 AGGAGSGYGGGEGSGAGGGYGGANGGGGGGNGGGGGGGSGGAHGGGAAGGGEGAGQGAGG 240

Query: 241 DSHGHEGRDSGYGSGGGVSGGYGNGGVHGGEHDNSKGSGEEGGSDGGY 280
              G      G GSGGG  GGYG GG  G  +    GSGE GG  GGY
Sbjct: 241 GYGGGAAGGGGRGSGGGGGGGYGGGGARGSGYGGGGGSGEGGGHGGGY 250

[Close]

BLAST of CSPI03G01570 vs. ExPASy TrEMBL
Match: A0A5A7UEU3 (Glycine-rich cell wall structural protein 1.0-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G001560 PE=4 SV=1)

HSP 1 Score: 457.2 bits (1175), Expect = 5.0e-125
Identity = 257/293 (87.71%), Postives = 262/293 (89.42%), Query Frame = 0


Query: 1   MAISRVLCIGFLLFVGLGLASAARTLLDYDPRARRYDYDRPTPRVGYDPSHRDQSYDNVY 60
           MAISR LCI FLLFV LGLASAARTLLDYDPR RRYDYD PTPRVGYDPSHRDQSYDN Y
Sbjct: 1   MAISRALCISFLLFVCLGLASAARTLLDYDPRTRRYDYDHPTPRVGYDPSHRDQSYDNAY 60

Query: 61  GGSSSRGYGAGDSALGGSGRYEGGGGRDYGHGGRNDDRGVGYGGRNDDH----GAEYGGR 120
           GGSS+RGYG GDSALGGSGRYEGGGG DYG+GGRNDDRGVGYGGRNDDH    GA YGGR
Sbjct: 61  GGSSNRGYGVGDSALGGSGRYEGGGGHDYGYGGRNDDRGVGYGGRNDDHGAGYGAGYGGR 120

Query: 121 NDDHGAGYGSRNDDRGAGYGSRNDDRGVGYGSRNDDRSVGYGGRNDDRGVGYGNGGGYGG 180
           NDD GAGYG RNDDRGAGYG RNDD G GYG RNDDR  GYGGRNDDRGVGYGNGGGYGG
Sbjct: 121 NDDRGAGYGGRNDDRGAGYGRRNDDHGAGYGGRNDDRGAGYGGRNDDRGVGYGNGGGYGG 180

Query: 181 VGGHGDGYGNNGGGSYGDRYGPSLGGSGYGSGGKGSGNGYDDHSRGNGARDNSYGDSHGH 240
           VGGHGDGYGNN GG YGDRY PSLGGSGYG+GGKGSGNGYDDHSRG G  DN YGDSHGH
Sbjct: 181 VGGHGDGYGNNVGGGYGDRYSPSLGGSGYGNGGKGSGNGYDDHSRGYGGHDNGYGDSHGH 240

Query: 241 EGRDSGYGSGGGVSGGYGNGGVHGGEHDNSKGSGEEGGSDGGYAFKNSISKEN 290
            GRDSGYGSGGGVSGGYGNGGVHGGE+DNSKGSGE GG+DGGYA KNSISKEN
Sbjct: 241 GGRDSGYGSGGGVSGGYGNGGVHGGEYDNSKGSGEGGGNDGGYAVKNSISKEN 293

[Close]

BLAST of CSPI03G01570 vs. ExPASy TrEMBL
Match: A0A1S3BM26 (glycine-rich cell wall structural protein 1.0-like OS=Cucumis melo OX=3656 GN=LOC103491114 PE=4 SV=1)

HSP 1 Score: 457.2 bits (1175), Expect = 5.0e-125
Identity = 257/293 (87.71%), Postives = 262/293 (89.42%), Query Frame = 0


Query: 1   MAISRVLCIGFLLFVGLGLASAARTLLDYDPRARRYDYDRPTPRVGYDPSHRDQSYDNVY 60
           MAISR LCI FLLFV LGLASAARTLLDYDPR RRYDYD PTPRVGYDPSHRDQSYDN Y
Sbjct: 1   MAISRALCISFLLFVCLGLASAARTLLDYDPRTRRYDYDHPTPRVGYDPSHRDQSYDNAY 60

Query: 61  GGSSSRGYGAGDSALGGSGRYEGGGGRDYGHGGRNDDRGVGYGGRNDDH----GAEYGGR 120
           GGSS+RGYG GDSALGGSGRYEGGGG DYG+GGRNDDRGVGYGGRNDDH    GA YGGR
Sbjct: 61  GGSSNRGYGVGDSALGGSGRYEGGGGHDYGYGGRNDDRGVGYGGRNDDHGAGYGAGYGGR 120

Query: 121 NDDHGAGYGSRNDDRGAGYGSRNDDRGVGYGSRNDDRSVGYGGRNDDRGVGYGNGGGYGG 180
           NDD GAGYG RNDDRGAGYG RNDD G GYG RNDDR  GYGGRNDDRGVGYGNGGGYGG
Sbjct: 121 NDDRGAGYGGRNDDRGAGYGRRNDDHGAGYGGRNDDRGAGYGGRNDDRGVGYGNGGGYGG 180

Query: 181 VGGHGDGYGNNGGGSYGDRYGPSLGGSGYGSGGKGSGNGYDDHSRGNGARDNSYGDSHGH 240
           VGGHGDGYGNN GG YGDRY PSLGGSGYG+GGKGSGNGYDDHSRG G  DN YGDSHGH
Sbjct: 181 VGGHGDGYGNNVGGGYGDRYSPSLGGSGYGNGGKGSGNGYDDHSRGYGGHDNGYGDSHGH 240

Query: 241 EGRDSGYGSGGGVSGGYGNGGVHGGEHDNSKGSGEEGGSDGGYAFKNSISKEN 290
            GRDSGYGSGGGVSGGYGNGGVHGGE+DNSKGSGE GG+DGGYA KNSISKEN
Sbjct: 241 GGRDSGYGSGGGVSGGYGNGGVHGGEYDNSKGSGEGGGNDGGYAVKNSISKEN 293

[Close]

BLAST of CSPI03G01570 vs. ExPASy TrEMBL
Match: A0A5A7UHU2 (Glycine-rich cell wall structural protein 1.8-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G001580 PE=4 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 2.2e-80
Identity = 195/290 (67.24%), Postives = 201/290 (69.31%), Query Frame = 0


Query: 1   MAISRVLCIGFLLFVGLGLASAARTLLDYDPRARRYDYDRPTPRVGYDPSHRDQSYDNVY 60
           MAI R LC+ FLLFVGLGLASA RTLLDYDPR R Y YDRP+PRVGYDP HRD+SYDN Y
Sbjct: 1   MAILRALCLAFLLFVGLGLASATRTLLDYDPRTRHYGYDRPSPRVGYDPGHRDESYDNAY 60

Query: 61  GGSSSRGYGAGDSALGGSGRYEGGGGRDYGHGGRNDDRGVGYGGRNDDHGAEYGGRNDDH 120
           GGSSSRG+G GDSALGGSG YEGGG RDY                               
Sbjct: 61  GGSSSRGHGIGDSALGGSG-YEGGGRRDY------------------------------- 120

Query: 121 GAGYGSRNDDRGAGYGSRNDDRGVGYGSRNDDRSVGYGGRNDDRGVGYGNGGGYGGVGGH 180
                                              GYG RND+RGVGYGNGGGYGGVGGH
Sbjct: 121 -----------------------------------GYGDRNDNRGVGYGNGGGYGGVGGH 180

Query: 181 GDGYGNNGGGSYGDRYGPSLGGSGYGSGGKGSGNGYDD-HSRGNGARDNSYGDSHGHEGR 240
           GDGYGNNGGG YGDRYGPSLGGSGYGSGGKGS NGYDD HS G G RDN YGDSHGHEGR
Sbjct: 181 GDGYGNNGGGGYGDRYGPSLGGSGYGSGGKGSDNGYDDRHSHGYGGRDNGYGDSHGHEGR 223

Query: 241 DSGYGSGGGVSGGYGNGGVHGGEHDNSKGSGEEGGSDGGYAFKNSISKEN 290
           DSGYGSGGGVSGGYGNGGVHGGE+DNSKGSGEEGG DGGYA KNSISK N
Sbjct: 241 DSGYGSGGGVSGGYGNGGVHGGEYDNSKGSGEEGGYDGGYAVKNSISKGN 223

[Close]

BLAST of CSPI03G01570 vs. ExPASy TrEMBL
Match: A0A1S3BMC4 (glycine-rich cell wall structural protein 1.8-like OS=Cucumis melo OX=3656 GN=LOC103491115 PE=4 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 2.2e-80
Identity = 195/290 (67.24%), Postives = 201/290 (69.31%), Query Frame = 0


Query: 1   MAISRVLCIGFLLFVGLGLASAARTLLDYDPRARRYDYDRPTPRVGYDPSHRDQSYDNVY 60
           MAI R LC+ FLLFVGLGLASA RTLLDYDPR R Y YDRP+PRVGYDP HRD+SYDN Y
Sbjct: 1   MAILRALCLAFLLFVGLGLASATRTLLDYDPRTRHYGYDRPSPRVGYDPGHRDESYDNAY 60

Query: 61  GGSSSRGYGAGDSALGGSGRYEGGGGRDYGHGGRNDDRGVGYGGRNDDHGAEYGGRNDDH 120
           GGSSSRG+G GDSALGGSG YEGGG RDY                               
Sbjct: 61  GGSSSRGHGIGDSALGGSG-YEGGGRRDY------------------------------- 120

Query: 121 GAGYGSRNDDRGAGYGSRNDDRGVGYGSRNDDRSVGYGGRNDDRGVGYGNGGGYGGVGGH 180
                                              GYG RND+RGVGYGNGGGYGGVGGH
Sbjct: 121 -----------------------------------GYGDRNDNRGVGYGNGGGYGGVGGH 180

Query: 181 GDGYGNNGGGSYGDRYGPSLGGSGYGSGGKGSGNGYDD-HSRGNGARDNSYGDSHGHEGR 240
           GDGYGNNGGG YGDRYGPSLGGSGYGSGGKGS NGYDD HS G G RDN YGDSHGHEGR
Sbjct: 181 GDGYGNNGGGGYGDRYGPSLGGSGYGSGGKGSDNGYDDRHSHGYGGRDNGYGDSHGHEGR 223

Query: 241 DSGYGSGGGVSGGYGNGGVHGGEHDNSKGSGEEGGSDGGYAFKNSISKEN 290
           DSGYGSGGGVSGGYGNGGVHGGE+DNSKGSGEEGG DGGYA KNSISK N
Sbjct: 241 DSGYGSGGGVSGGYGNGGVHGGEYDNSKGSGEEGGYDGGYAVKNSISKGN 223

[Close]

BLAST of CSPI03G01570 vs. ExPASy TrEMBL
Match: A0A0A0L1V3 (Glycine-rich protein-1 OS=Cucumis sativus OX=3659 GN=Csa_3G011070 PE=4 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 3.5e-78
Identity = 191/289 (66.09%), Postives = 201/289 (69.55%), Query Frame = 0


Query: 1   MAISRVLCIGFLLFVGLGLASAARTLLDYDPRARRYDYDRPTPRVGYDPSHRDQSYDNVY 60
           MAI R LC+ FLLFV LGLASA RTLLDYDPR  +Y YDRP+PRVGYDP H D+SYD  Y
Sbjct: 1   MAILRALCLAFLLFVRLGLASATRTLLDYDPRTLQYGYDRPSPRVGYDPGHGDESYDKAY 60

Query: 61  GGSSSRGYGAGDSALGGSGRYEGGGGRDYGHGGRNDDRGVGYGGRNDDHGAEYGGRNDDH 120
           GGSSSRG+G GDSALGGSG YEGGG  DYG+G R++DRGVGYG                 
Sbjct: 61  GGSSSRGHGIGDSALGGSG-YEGGGRHDYGYGDRHNDRGVGYG----------------- 120

Query: 121 GAGYGSRNDDRGAGYGSRNDDRGVGYGSRNDDRSVGYGGRNDDRGVGYGNGGGYGGVGGH 180
                                                             GGGYGGVGGH
Sbjct: 121 ------------------------------------------------NYGGGYGGVGGH 180

Query: 181 GDGYGNNGGGSYGDRYGPSLGGSGYGSGGKGSGNGYDDHSRGNGARDNSYGDSHGHEGRD 240
           GDGYGNNGGGSYGDRYGPSLGGSGYGSGGKGSGNGYDDHSRGNGARDNSYGDSHGH GRD
Sbjct: 181 GDGYGNNGGGSYGDRYGPSLGGSGYGSGGKGSGNGYDDHSRGNGARDNSYGDSHGHGGRD 223

Query: 241 SGYGSGGGVSGGYGNGGVHGGEHDNSKGSGEEGGSDGGYAFKNSISKEN 290
           SGYGSGGGV+GGYGNGGVHGGE+DNSKGSGEEGG DGGYA KNSISK N
Sbjct: 241 SGYGSGGGVTGGYGNGGVHGGEYDNSKGSGEEGGYDGGYAVKNSISKGN 223

[Close]

BLAST of CSPI03G01570 vs. NCBI nr
Match: XP_031739354.1 (glycine-rich cell wall structural protein 1.8 [Cucumis sativus])

HSP 1 Score: 488.8 bits (1257), Expect = 3.2e-134
Identity = 272/289 (94.12%), Postives = 277/289 (95.85%), Query Frame = 0


Query: 1   MAISRVLCIGFLLFVGLGLASAARTLLDYDPRARRYDYDRPTPRVGYDPSHRDQSYDNVY 60
           MAISRVLCIGFLLFVGLGLASAARTLLDYDPRARRYDYDRPTPRVGYDPSHRDQSYDNVY
Sbjct: 1   MAISRVLCIGFLLFVGLGLASAARTLLDYDPRARRYDYDRPTPRVGYDPSHRDQSYDNVY 60

Query: 61  GGSSSRGYGAGDSALGGSGRYEGGGGRDYGHGGRNDDRGVGYGGRNDDHGAEYGGRNDDH 120
           GGSSSRGYGAGDSALGGSGRYEGGGGRDYGHGGRNDDRGVGYGGRNDD GAEYGGRNDDH
Sbjct: 61  GGSSSRGYGAGDSALGGSGRYEGGGGRDYGHGGRNDDRGVGYGGRNDDRGAEYGGRNDDH 120

Query: 121 GAGYGSRNDDRGAGYGSRNDDRGVGYGSRNDDRSVGYGGRNDDRGVGYGNGGGYGGVGGH 180
           GAGYGSRNDDRG GYGSRNDDRGVGYGSRNDDRSVGYGGRNDDRGVGYGNGGGYGGVGGH
Sbjct: 121 GAGYGSRNDDRGVGYGSRNDDRGVGYGSRNDDRSVGYGGRNDDRGVGYGNGGGYGGVGGH 180

Query: 181 GDGYGNNGGGSYGDRYGPSLGGSGYGSGGKGSGNGYDDHSRGNGARDNSYGDSHGHEGRD 240
           GDGYGNNGGGSYGDRYGPSLGGS     GKGS NGY+DHSRGNG RD+ YGDSHGHEGR+
Sbjct: 181 GDGYGNNGGGSYGDRYGPSLGGS-----GKGSNNGYNDHSRGNGGRDSGYGDSHGHEGRE 240

Query: 241 SGYGSGGGVSGGYGNGGVHGGEHDNSKGSGEEGGSDGGYAFKNSISKEN 290
           SG GSGGGVSGGYGNGGVHGGE+DNSKGSGEEGG+DGGYA KNSISKEN
Sbjct: 241 SGNGSGGGVSGGYGNGGVHGGEYDNSKGSGEEGGNDGGYAVKNSISKEN 284

[Close]

BLAST of CSPI03G01570 vs. NCBI nr
Match: XP_031738632.1 (glycine-rich cell wall structural protein 1.8-like [Cucumis sativus])

HSP 1 Score: 464.9 bits (1195), Expect = 5.0e-127
Identity = 261/300 (87.00%), Postives = 267/300 (89.00%), Query Frame = 0


Query: 1   MAISRVLCIGFLLFVGLGLASAARTLLDYDPRARRYDYDRPTPRVGYDPSHRDQSYDNVY 60
           MAI +VLCIGFLLFVGLGLASAARTLLDYDPR RRYDYD PTPRVGYDPSHRDQSYD+ Y
Sbjct: 1   MAIPKVLCIGFLLFVGLGLASAARTLLDYDPRTRRYDYDHPTPRVGYDPSHRDQSYDSAY 60

Query: 61  GGSSSRGYGAGDSALGGSGRYEGGGGRDYGHGGRNDD-----------RGVGYGGRNDDH 120
            GSSS+GYG GDSALGGSGRYEGGGGRD G+GGRNDD           RG GYG RNDD 
Sbjct: 61  SGSSSKGYGVGDSALGGSGRYEGGGGRDSGYGGRNDDHGVGYEGRNDGRGAGYGSRNDDR 120

Query: 121 GAEYGGRNDDHGAGYGSRNDDRGAGYGSRNDDRGVGYGSRNDDRSVGYGGRNDDRGVGYG 180
            A YGGRNDD GAGYG RNDDRGAGYG RNDD G GYGSRNDD   GYGGRNDDRGVGYG
Sbjct: 121 SAGYGGRNDDRGAGYGGRNDDRGAGYGGRNDDHGAGYGSRNDDHGAGYGGRNDDRGVGYG 180

Query: 181 NGGGYGGVGGHGDGYGNNGGGSYGDRYGPSLGGSGYGSGGKGSGNGYDDHSRGNGARDNS 240
           NGGGYG VGGHGDGYGNNGGGSYGDRYGPSLGGSGYGSGGKGSGNGYDDHSRGNGARDN+
Sbjct: 181 NGGGYGSVGGHGDGYGNNGGGSYGDRYGPSLGGSGYGSGGKGSGNGYDDHSRGNGARDNN 240

Query: 241 YGDSHGHEGRDSGYGSGGGVSGGYGNGGVHGGEHDNSKGSGEEGGSDGGYAFKNSISKEN 290
           YGDSHGHEGRDSGYGSGGGVSGGYGNGGVHGGEHDNSKGSGEEGGSDGGYAFKNSIS +N
Sbjct: 241 YGDSHGHEGRDSGYGSGGGVSGGYGNGGVHGGEHDNSKGSGEEGGSDGGYAFKNSISNKN 300

[Close]

BLAST of CSPI03G01570 vs. NCBI nr
Match: XP_008449164.1 (PREDICTED: glycine-rich cell wall structural protein 1.0-like [Cucumis melo] >KAA0053037.1 glycine-rich cell wall structural protein 1.0-like [Cucumis melo var. makuwa] >TYK11492.1 glycine-rich cell wall structural protein 1.0-like [Cucumis melo var. makuwa])

HSP 1 Score: 457.2 bits (1175), Expect = 1.0e-124
Identity = 257/293 (87.71%), Postives = 262/293 (89.42%), Query Frame = 0


Query: 1   MAISRVLCIGFLLFVGLGLASAARTLLDYDPRARRYDYDRPTPRVGYDPSHRDQSYDNVY 60
           MAISR LCI FLLFV LGLASAARTLLDYDPR RRYDYD PTPRVGYDPSHRDQSYDN Y
Sbjct: 1   MAISRALCISFLLFVCLGLASAARTLLDYDPRTRRYDYDHPTPRVGYDPSHRDQSYDNAY 60

Query: 61  GGSSSRGYGAGDSALGGSGRYEGGGGRDYGHGGRNDDRGVGYGGRNDDH----GAEYGGR 120
           GGSS+RGYG GDSALGGSGRYEGGGG DYG+GGRNDDRGVGYGGRNDDH    GA YGGR
Sbjct: 61  GGSSNRGYGVGDSALGGSGRYEGGGGHDYGYGGRNDDRGVGYGGRNDDHGAGYGAGYGGR 120

Query: 121 NDDHGAGYGSRNDDRGAGYGSRNDDRGVGYGSRNDDRSVGYGGRNDDRGVGYGNGGGYGG 180
           NDD GAGYG RNDDRGAGYG RNDD G GYG RNDDR  GYGGRNDDRGVGYGNGGGYGG
Sbjct: 121 NDDRGAGYGGRNDDRGAGYGRRNDDHGAGYGGRNDDRGAGYGGRNDDRGVGYGNGGGYGG 180

Query: 181 VGGHGDGYGNNGGGSYGDRYGPSLGGSGYGSGGKGSGNGYDDHSRGNGARDNSYGDSHGH 240
           VGGHGDGYGNN GG YGDRY PSLGGSGYG+GGKGSGNGYDDHSRG G  DN YGDSHGH
Sbjct: 181 VGGHGDGYGNNVGGGYGDRYSPSLGGSGYGNGGKGSGNGYDDHSRGYGGHDNGYGDSHGH 240

Query: 241 EGRDSGYGSGGGVSGGYGNGGVHGGEHDNSKGSGEEGGSDGGYAFKNSISKEN 290
            GRDSGYGSGGGVSGGYGNGGVHGGE+DNSKGSGE GG+DGGYA KNSISKEN
Sbjct: 241 GGRDSGYGSGGGVSGGYGNGGVHGGEYDNSKGSGEGGGNDGGYAVKNSISKEN 293

[Close]

BLAST of CSPI03G01570 vs. NCBI nr
Match: KAE8650022.1 (hypothetical protein Csa_011604 [Cucumis sativus])

HSP 1 Score: 416.8 bits (1070), Expect = 1.6e-112
Identity = 242/289 (83.74%), Postives = 250/289 (86.51%), Query Frame = 0


Query: 1   MAISRVLCIGFLLFVGLGLASAARTLLDYDPRARRYDYDRPTPRVGYDPSHRDQSYDNVY 60
           MAISRVLCIGFLLFVGLGLASA RTLLDYDPRARRYDYD PTPRVGYDPSHRDQSYDN Y
Sbjct: 1   MAISRVLCIGFLLFVGLGLASATRTLLDYDPRARRYDYDHPTPRVGYDPSHRDQSYDNAY 60

Query: 61  GGSSSRGYGAGDSALGGSGRYEGGGGRDYGHGGRNDDRGVGYGGRNDDHGAEYGGRNDDH 120
            GSSS+GYG GDS LGGSGRY GG G D G+GGRNDDR  GYGGRNDD       R+D  
Sbjct: 61  SGSSSKGYGIGDSTLGGSGRYGGGKGHDSGYGGRNDDRSTGYGGRNDD-------RSD-- 120

Query: 121 GAGYGSRNDDRGAGYGSRNDDRGVGYGSRNDDRSVGYGGRNDDRGVGYGNGGGYGGVGGH 180
             GYG RNDDRGAGYG RNDDRGVGYG RNDDR VGYGGRNDDRGVGYGNGG YG VGGH
Sbjct: 121 --GYGGRNDDRGAGYGGRNDDRGVGYGGRNDDRGVGYGGRNDDRGVGYGNGGRYGSVGGH 180

Query: 181 GDGYGNNGGGSYGDRYGPSLGGSGYGSGGKGSGNGYDDHSRGNGARDNSYGDSHGHEGRD 240
           GDGYGNNGGGSYGDRYGPSLGGS     GKGS NGY+DHSRGNG RD+ YGDSHGHEGR+
Sbjct: 181 GDGYGNNGGGSYGDRYGPSLGGS-----GKGSNNGYNDHSRGNGGRDSGYGDSHGHEGRE 240

Query: 241 SGYGSGGGVSGGYGNGGVHGGEHDNSKGSGEEGGSDGGYAFKNSISKEN 290
           SG GSGGGVSGGYGNGGVHGGE+DNSKGSGEEGG+DGGYA KNSISKEN
Sbjct: 241 SGNGSGGGVSGGYGNGGVHGGEYDNSKGSGEEGGNDGGYAVKNSISKEN 273

[Close]

BLAST of CSPI03G01570 vs. NCBI nr
Match: KAE8650023.1 (hypothetical protein Csa_011563 [Cucumis sativus])

HSP 1 Score: 414.8 bits (1065), Expect = 5.9e-112
Identity = 238/289 (82.35%), Postives = 244/289 (84.43%), Query Frame = 0


Query: 1   MAISRVLCIGFLLFVGLGLASAARTLLDYDPRARRYDYDRPTPRVGYDPSHRDQSYDNVY 60
           MAI +VLCIGFLLFVGLGLASAARTLLDYDPR RRYDYD PTPRVGYDPSHRDQSYD+ Y
Sbjct: 1   MAIPKVLCIGFLLFVGLGLASAARTLLDYDPRTRRYDYDHPTPRVGYDPSHRDQSYDSAY 60

Query: 61  GGSSSRGYGAGDSALGGSGRYEGGGGRDYGHGGRNDDRGVGYGGRNDDHGAEYGGRNDDH 120
            GSSS+GYG GDSALGGSGRYEGGGGRD G+GGRNDDRG GYGGRNDDHGA YG RNDDH
Sbjct: 61  SGSSSKGYGVGDSALGGSGRYEGGGGRDSGYGGRNDDRGAGYGGRNDDHGAGYGSRNDDH 120

Query: 121 GAGYGSRNDDRGAGYGSRNDDRGVGYGSRNDDRSVGYGGRNDDRGVGYGNGGGYGGVGGH 180
           GA                                 GYGGRNDDRGVGYGNGGGYG VGGH
Sbjct: 121 GA---------------------------------GYGGRNDDRGVGYGNGGGYGSVGGH 180

Query: 181 GDGYGNNGGGSYGDRYGPSLGGSGYGSGGKGSGNGYDDHSRGNGARDNSYGDSHGHEGRD 240
           GDGYGNNGGGSYGDRYGPSLGGSGYGSGGKGSGNGYDDHSRGNGARDN+YGDSHGHEGRD
Sbjct: 181 GDGYGNNGGGSYGDRYGPSLGGSGYGSGGKGSGNGYDDHSRGNGARDNNYGDSHGHEGRD 240

Query: 241 SGYGSGGGVSGGYGNGGVHGGEHDNSKGSGEEGGSDGGYAFKNSISKEN 290
           SGYGSGGGVSGGYGNGGVHGGEHDNSKGSGEEGGSDGGYAFKNSIS +N
Sbjct: 241 SGYGSGGGVSGGYGNGGVHGGEHDNSKGSGEEGGSDGGYAFKNSISNKN 256

[Close]

BLAST of CSPI03G01570 vs. TAIR 10
Match: AT3G07030.1 (Alba DNA/RNA-binding protein )

HSP 1 Score: 43.5 bits (101), Expect = 3.3e-04
Identity = 97/222 (43.69%), Postives = 110/222 (49.55%), Query Frame = 0


Query: 75  LGGSGRYEGGGGRDYGHGGRNDD-----RGVGYGGRNDDHGAEYGGRNDDHGAGYGSRND 134
           +GG G Y  GGGRD G+GG  DD     R  GYG R +D    YGG  DD   GYG   D
Sbjct: 213 VGGRGGY--GGGRDGGYGGGRDDGYGERRNDGYGERRND---RYGGGRDD---GYGGGRD 272

Query: 135 DRGAGYGSRNDDRGVGYGSRNDDRSVGYGGRNDDRGVGYGNG-GGYGG-VGGHGDGYGNN 194
           D   GYG   +D   GYG R   R    GGR   R  GYG G GGYGG  GG GDGY   
Sbjct: 273 D---GYGGGRND---GYGGR---RGGFRGGRGGGRDEGYGGGRGGYGGRSGGQGDGY--- 332

Query: 195 GGGSYGDRYGPSLGGSGYGSGGKGSGNGYDDHSRGNGARDNSYGDSHGHEGRDSGYGSGG 254
            GG  GD YG    G GYG GG+G G G     R +G R + YG      GR  GYG G 
Sbjct: 333 -GGGRGDGYGGG-RGDGYG-GGRGDGYGGGRVDRYDGGRRDGYGG-----GRYDGYGGGK 392

Query: 255 GVSGGYGNGGVHGGEHDNSKGSGEEGGSDGGYAFKNSISKEN 290
               G G GG  GG     +G G  G  +GG + ++  S +N
Sbjct: 393 SDGYGGGRGGYRGGRGGYGRGRGRMG--NGGRS-RDGASNQN 403

The following BLAST results are available for this feature:

BLAST of CSPI03G01570 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10496	1.6e-06	38.56	Glycine-rich cell wall structural protein 1.8 OS=Phaseolus vulgaris OX=3885 PE=2...	[more]
P10495	1.1e-04	37.85	Glycine-rich cell wall structural protein 1.0 OS=Phaseolus vulgaris OX=3885 PE=2...	[more]

BLAST of CSPI03G01570 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UEU3	5.0e-125	87.71	Glycine-rich cell wall structural protein 1.0-like OS=Cucumis melo var. makuwa O...	[more]
A0A1S3BM26	5.0e-125	87.71	glycine-rich cell wall structural protein 1.0-like OS=Cucumis melo OX=3656 GN=LO...	[more]
A0A5A7UHU2	2.2e-80	67.24	Glycine-rich cell wall structural protein 1.8-like OS=Cucumis melo var. makuwa O...	[more]
A0A1S3BMC4	2.2e-80	67.24	glycine-rich cell wall structural protein 1.8-like OS=Cucumis melo OX=3656 GN=LO...	[more]
A0A0A0L1V3	3.5e-78	66.09	Glycine-rich protein-1 OS=Cucumis sativus OX=3659 GN=Csa_3G011070 PE=4 SV=1	[more]

BLAST of CSPI03G01570 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031739354.1	3.2e-134	94.12	glycine-rich cell wall structural protein 1.8 [Cucumis sativus]	[more]
XP_031738632.1	5.0e-127	87.00	glycine-rich cell wall structural protein 1.8-like [Cucumis sativus]	[more]
XP_008449164.1	1.0e-124	87.71	PREDICTED: glycine-rich cell wall structural protein 1.0-like [Cucumis melo] >KA...	[more]
KAE8650022.1	1.6e-112	83.74	hypothetical protein Csa_011604 [Cucumis sativus]	[more]
KAE8650023.1	5.9e-112	82.35	hypothetical protein Csa_011563 [Cucumis sativus]	[more]

BLAST of CSPI03G01570 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G07030.1	3.3e-04	43.69	Alba DNA/RNA-binding protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 35..51
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 87..126
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 190..289
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 35..166
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 220..239

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G01570.1	CSPI03G01570.1	mRNA