CSPI03G00460 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI03G00460
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionPentatricopeptide repeat-containing protein
LocationChr3: 355096 .. 357148 (+)
RNA-Seq ExpressionCSPI03G00460
SyntenyCSPI03G00460
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGTCAACATCCATACATCATCATCATCACCACCATCATCATCAATCATCACGTATTATATCCACAACGGAGACTACATTCGGTACCGGGAAACTGATCGGCGTATTTTCCACTGCCGTGAGAGAACAGTAATAAATGAATGGGCTTTGCCGGCGAACTTGGCAAGCTCTGACGTTCAGAAATCAACCCTTCTTCAGATTGCTAAGATCCTTCTTCAGCGAATGGAGTTTTGGGAAGTATCATCGCGATTCGTACGGTTTTATCAAGTTATTGGGGCATTGCAGAAGCATTAGAAGCGTTCAGGAACTACATGCCCAGATCCTCGTTGAGGGTCTTGATCAAAATGGATTTGTTGCCGCGAAACTGATCGGGAAATACGTGGAGCATGATGAGGGTGAAGTGAAAATGGGAACTGCACGGAAGGTGTTTGATACATTGGTTCGAAGAGATGTGTTTGTGTGGAATGTGGTTATACAAGGGTATGCGAGTTTGGGTCCGTTTGTTGAAGCTCTTAATCTGTTTGATGAAATGCGAGTCAGTGGGGAACCCACAAATCGCTATACGTTTCCTTTTGTGTTGAAGGCATGTGGCGCAATGAAGAATAGTGATAAGGGTGAGATTGTTCATGGACATGTTGTGAAATGTGGGTTGGACTTGGATTTGTTTGTGGGTAATGCTCTGATCGCGTTTTATTCCAAATGTCAGGACGTTGAAACTGCTCGTAAAGTGTTTGATGATATGTCTCTGAGAGACATTGTGAGTTGGAACTCCATGATTGTTGGTTATACTTTGAATGGGAAAGAGGACGAGGCTATAATGTTTTTTCATGCCATGCTGCATAACCAAGCTGATTGCACACCTGATTCTGCAACTCTTGTTGCGATTCTACCTGCTTGTGCTACAAAATCTGCTTCCCAAGTTGGCTTTTGGGTTCATTCCTATGTTATAAAGACAGGAATAGAAGTTGGGGCTCCCCTGGGCAGTTGCCTTATTTGTATGTATGGTAACTGTGGTCATGTGAACATTGCAAGAGATGTTTTCGACCGAATCGACGACAAAAATGTTATCGTATGGAGTGCAATCATAAGGTGTTATGGAATGCATGGTTTTGCAGATGAAGCATTTAACATGTTCAGAAGATTGGAAGAAGCTGGTGTTAAACCAGATGGTCTGATCTTCCTGAACTTGTTGTCGGCTTGTAGTCACGCAGGGCTCGTTGCTAAAGGTCGCGAGATATACGAAAAAATGGAGGCTTACGGTTTGGAGAGGAAAGATAACCACTACGCGTGCATGGTGGATCTCTTAGGGAGGGCTGGTTTCTTAGAACAAGCGGTAGAATTCATCGAAGGGATGCCCGTGCAGGCAGGAAAAGATGTATATGGTGCATTGTTGGGTGCTTGTAGGATACATAACAACCTAGAGCTAGCTAAAGAAGTGGGGGAGAAGTTGTTTATCTTAGATCCCGAAAAAGCCAGTCGGTATGTGACCTTAGCAACTATGTATGAAGATGCAGGGCAGTGGGAAGATGCTGCTAAACTAAGGAAGTTGCTGAGGGATAGGAATATTAGGAAGCCAGCTGGTTGCAGTTCGATAGAGGTAGATAGGATCCATCATGTGTTTGGGAAGAAGGATGAAACTCATCCCCTCACGGAAGAGATTTTTGACACATTAGAGAAGCTAGAAAGAATAATGGAGGAAGATTTTGAACCTATTTAATGGATTTTTTGTTCACACACGTTTCAATATACGTAGTTTAAGGACAATTTATCCTTGACTATGCTTTTATTTTTCTCCTCTTTCTAGGAAGTTTCAATCCAAATTCAAATGGATCAAACATAAATTGAAGACAAGCATACTTTAACCATCATTTTGTTTTCCTCTCCTCGTGTTAATGACTTCAATTCGAACATTAGTGATAGCAAACGGTTTGTTGGATGCTGGTGAAATTTACAAAGGCAGTTTTAGTTTACATTTAGTTTAATTTCATCTTTTTTTAGTTATGTTATTCTAAGGGAGGAAAAGGCGGAGTTAAAGTAGTTTTGAATGTTAGAATC

mRNA sequence

TGTCAACATCCATACATCATCATCATCACCACCATCATCATCAATCATCACGTATTATATCCACAACGGAGACTACATTCGGTACCGGGAAACTGATCGGCGTATTTTCCACTGCCGTGAGAGAACAGTAATAAATGAATGGGCTTTGCCGGCGAACTTGGCAAGCTCTGACGTTCAGAAATCAACCCTTCTTCAGATTGCTAAGATCCTTCTTCAGCGAATGGAGTTTTGGGAAGTATCATCGCGATTCGTACGGTTTTATCAAGTTATTGGGGCATTGCAGAAGCATTAGAAGCGTTCAGGAACTACATGCCCAGATCCTCGTTGAGGGTCTTGATCAAAATGGATTTGTTGCCGCGAAACTGATCGGGAAATACGTGGAGCATGATGAGGGTGAAGTGAAAATGGGAACTGCACGGAAGGTGTTTGATACATTGGTTCGAAGAGATGTGTTTGTGTGGAATGTGGTTATACAAGGGTATGCGAGTTTGGGTCCGTTTGTTGAAGCTCTTAATCTGTTTGATGAAATGCGAGTCAGTGGGGAACCCACAAATCGCTATACGTTTCCTTTTGTGTTGAAGGCATGTGGCGCAATGAAGAATAGTGATAAGGGTGAGATTGTTCATGGACATGTTGTGAAATGTGGGTTGGACTTGGATTTGTTTGTGGGTAATGCTCTGATCGCGTTTTATTCCAAATGTCAGGACGTTGAAACTGCTCGTAAAGTGTTTGATGATATGTCTCTGAGAGACATTGTGAGTTGGAACTCCATGATTGTTGGTTATACTTTGAATGGGAAAGAGGACGAGGCTATAATGTTTTTTCATGCCATGCTGCATAACCAAGCTGATTGCACACCTGATTCTGCAACTCTTGTTGCGATTCTACCTGCTTGTGCTACAAAATCTGCTTCCCAAGTTGGCTTTTGGGTTCATTCCTATGTTATAAAGACAGGAATAGAAGTTGGGGCTCCCCTGGGCAGTTGCCTTATTTGTATGTATGGTAACTGTGGTCATGTGAACATTGCAAGAGATGTTTTCGACCGAATCGACGACAAAAATGTTATCGTATGGAGTGCAATCATAAGGTGTTATGGAATGCATGGTTTTGCAGATGAAGCATTTAACATGTTCAGAAGATTGGAAGAAGCTGGTGTTAAACCAGATGGTCTGATCTTCCTGAACTTGTTGTCGGCTTGTAGTCACGCAGGGCTCGTTGCTAAAGGTCGCGAGATATACGAAAAAATGGAGGCTTACGGTTTGGAGAGGAAAGATAACCACTACGCGTGCATGGTGGATCTCTTAGGGAGGGCTGGTTTCTTAGAACAAGCGGTAGAATTCATCGAAGGGATGCCCGTGCAGGCAGGAAAAGATGTATATGGTGCATTGTTGGGTGCTTGTAGGATACATAACAACCTAGAGCTAGCTAAAGAAGTGGGGGAGAAGTTGTTTATCTTAGATCCCGAAAAAGCCAGTCGGTATGTGACCTTAGCAACTATGTATGAAGATGCAGGGCAGTGGGAAGATGCTGCTAAACTAAGGAAGTTGCTGAGGGATAGGAATATTAGGAAGCCAGCTGGTTGCAGTTCGATAGAGGTAGATAGGATCCATCATGTGTTTGGGAAGAAGGATGAAACTCATCCCCTCACGGAAGAGATTTTTGACACATTAGAGAAGCTAGAAAGAATAATGGAGGAAGATTTTGAACCTATTTAATGGATTTTTTGTTCACACACGTTTCAATATACGTAGTTTAAGGACAATTTATCCTTGACTATGCTTTTATTTTTCTCCTCTTTCTAGGAAGTTTCAATCCAAATTCAAATGGATCAAACATAAATTGAAGACAAGCATACTTTAACCATCATTTTGTTTTCCTCTCCTCGTGTTAATGACTTCAATTCGAACATTAGTGATAGCAAACGGTTTGTTGGATGCTGGTGAAATTTACAAAGGCAGTTTTAGTTTACATTTAGTTTAATTTCATCTTTTTTTAGTTATGTTATTCTAAGGGAGGAAAAGGCGGAGTTAAAGTAGTTTTGAATGTTAGAATC

Coding sequence (CDS)

ATGAATGGGCTTTGCCGGCGAACTTGGCAAGCTCTGACGTTCAGAAATCAACCCTTCTTCAGATTGCTAAGATCCTTCTTCAGCGAATGGAGTTTTGGGAAGTATCATCGCGATTCGTACGGTTTTATCAAGTTATTGGGGCATTGCAGAAGCATTAGAAGCGTTCAGGAACTACATGCCCAGATCCTCGTTGAGGGTCTTGATCAAAATGGATTTGTTGCCGCGAAACTGATCGGGAAATACGTGGAGCATGATGAGGGTGAAGTGAAAATGGGAACTGCACGGAAGGTGTTTGATACATTGGTTCGAAGAGATGTGTTTGTGTGGAATGTGGTTATACAAGGGTATGCGAGTTTGGGTCCGTTTGTTGAAGCTCTTAATCTGTTTGATGAAATGCGAGTCAGTGGGGAACCCACAAATCGCTATACGTTTCCTTTTGTGTTGAAGGCATGTGGCGCAATGAAGAATAGTGATAAGGGTGAGATTGTTCATGGACATGTTGTGAAATGTGGGTTGGACTTGGATTTGTTTGTGGGTAATGCTCTGATCGCGTTTTATTCCAAATGTCAGGACGTTGAAACTGCTCGTAAAGTGTTTGATGATATGTCTCTGAGAGACATTGTGAGTTGGAACTCCATGATTGTTGGTTATACTTTGAATGGGAAAGAGGACGAGGCTATAATGTTTTTTCATGCCATGCTGCATAACCAAGCTGATTGCACACCTGATTCTGCAACTCTTGTTGCGATTCTACCTGCTTGTGCTACAAAATCTGCTTCCCAAGTTGGCTTTTGGGTTCATTCCTATGTTATAAAGACAGGAATAGAAGTTGGGGCTCCCCTGGGCAGTTGCCTTATTTGTATGTATGGTAACTGTGGTCATGTGAACATTGCAAGAGATGTTTTCGACCGAATCGACGACAAAAATGTTATCGTATGGAGTGCAATCATAAGGTGTTATGGAATGCATGGTTTTGCAGATGAAGCATTTAACATGTTCAGAAGATTGGAAGAAGCTGGTGTTAAACCAGATGGTCTGATCTTCCTGAACTTGTTGTCGGCTTGTAGTCACGCAGGGCTCGTTGCTAAAGGTCGCGAGATATACGAAAAAATGGAGGCTTACGGTTTGGAGAGGAAAGATAACCACTACGCGTGCATGGTGGATCTCTTAGGGAGGGCTGGTTTCTTAGAACAAGCGGTAGAATTCATCGAAGGGATGCCCGTGCAGGCAGGAAAAGATGTATATGGTGCATTGTTGGGTGCTTGTAGGATACATAACAACCTAGAGCTAGCTAAAGAAGTGGGGGAGAAGTTGTTTATCTTAGATCCCGAAAAAGCCAGTCGGTATGTGACCTTAGCAACTATGTATGAAGATGCAGGGCAGTGGGAAGATGCTGCTAAACTAAGGAAGTTGCTGAGGGATAGGAATATTAGGAAGCCAGCTGGTTGCAGTTCGATAGAGGTAGATAGGATCCATCATGTGTTTGGGAAGAAGGATGAAACTCATCCCCTCACGGAAGAGATTTTTGACACATTAGAGAAGCTAGAAAGAATAATGGAGGAAGATTTTGAACCTATTTAA

Protein sequence

MNGLCRRTWQALTFRNQPFFRLLRSFFSEWSFGKYHRDSYGFIKLLGHCRSIRSVQELHAQILVEGLDQNGFVAAKLIGKYVEHDEGEVKMGTARKVFDTLVRRDVFVWNVVIQGYASLGPFVEALNLFDEMRVSGEPTNRYTFPFVLKACGAMKNSDKGEIVHGHVVKCGLDLDLFVGNALIAFYSKCQDVETARKVFDDMSLRDIVSWNSMIVGYTLNGKEDEAIMFFHAMLHNQADCTPDSATLVAILPACATKSASQVGFWVHSYVIKTGIEVGAPLGSCLICMYGNCGHVNIARDVFDRIDDKNVIVWSAIIRCYGMHGFADEAFNMFRRLEEAGVKPDGLIFLNLLSACSHAGLVAKGREIYEKMEAYGLERKDNHYACMVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLGACRIHNNLELAKEVGEKLFILDPEKASRYVTLATMYEDAGQWEDAAKLRKLLRDRNIRKPAGCSSIEVDRIHHVFGKKDETHPLTEEIFDTLEKLERIMEEDFEPI*
Homology
[Close]
BLAST of CSPI03G00460 vs. ExPASy Swiss-Prot
Match: Q9STF3 (Pentatricopeptide repeat-containing protein At3g46790, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CRR2 PE=2 SV=1)

HSP 1 Score: 364.8 bits (935), Expect = 1.7e-99
Identity = 182/480 (37.92%), Postives = 289/480 (60.21%), Query Frame = 0 

Query: 47  GHCRSIRSVQELHAQILVEGLDQNGFVAAKLIGKYVEHDEGEVKMGTARKVFDTLVRRDV 106
           GH  S+     +H  IL  G DQ+ F+A KLIG Y   D G V    ARKVFD   +R +
Sbjct: 88  GHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMY--SDLGSVDY--ARKVFDKTRKRTI 147

Query: 107 FVWNVVIQGYASLGPFVEALNLFDEMRVSGEPTNRYTFPFVLKACGA----MKNSDKGEI 166
           +VWN + +     G   E L L+ +M   G  ++R+T+ +VLKAC A    + +  KG+ 
Sbjct: 148 YVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKE 207

Query: 167 VHGHVVKCGLDLDLFVGNALIAFYSKCQDVETARKVFDDMSLRDIVSWNSMIVGYTLNGK 226
           +H H+ + G    +++   L+  Y++   V+ A  VF  M +R++VSW++MI  Y  NGK
Sbjct: 208 IHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGK 267

Query: 227 EDEAIMFFHAMLHNQADCTPDSATLVAILPACATKSASQVGFWVHSYVIKTGIEVGAPLG 286
             EA+  F  M+    D +P+S T+V++L ACA+ +A + G  +H Y+++ G++   P+ 
Sbjct: 268 AFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVI 327

Query: 287 SCLICMYGNCGHVNIARDVFDRIDDKNVIVWSAIIRCYGMHGFADEAFNMFRRLEEAGVK 346
           S L+ MYG CG + + + VFDR+ D++V+ W+++I  YG+HG+  +A  +F  +   G  
Sbjct: 328 SALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGAS 387

Query: 347 PDGLIFLNLLSACSHAGLVAKGREIYEKM-EAYGLERKDNHYACMVDLLGRAGFLEQAVE 406
           P  + F+++L ACSH GLV +G+ ++E M   +G++ +  HYACMVDLLGRA  L++A +
Sbjct: 388 PTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAK 447

Query: 407 FIEGMPVQAGKDVYGALLGACRIHNNLELAKEVGEKLFILDPEKASRYVTLATMYEDAGQ 466
            ++ M  + G  V+G+LLG+CRIH N+ELA+    +LF L+P+ A  YV LA +Y +A  
Sbjct: 448 MVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQM 507

Query: 467 WEDAAKLRKLLRDRNIRKPAGCSSIEVDRIHHVFGKKDETHPLTEEIFDTLEKLERIMEE 522
           W++  +++KLL  R ++K  G   +EV R  + F   DE +PL E+I   L KL   M+E
Sbjct: 508 WDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKE 563

[Close]
BLAST of CSPI03G00460 vs. ExPASy Swiss-Prot
Match: O82380 (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H33 PE=2 SV=1)

HSP 1 Score: 357.1 bits (915), Expect = 3.5e-97
Identity = 188/516 (36.43%), Postives = 293/516 (56.78%), Query Frame = 0 

Query: 43  IKLLGHCRSIRSVQELHAQILVEGLDQNGFVAAKLIGKYVEHDEGEVKMGTARKVFDTLV 102
           IK      S+   Q LH   +   +  + FVA  LI  Y    +    + +A KVF T+ 
Sbjct: 138 IKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGD----LDSACKVFTTIK 197

Query: 103 RRDVFVWNVVIQGYASLGPFVEALNLFDEMRVSGEPTNRYTFPFVLKACGAMKNSDKGEI 162
            +DV  WN +I G+   G   +AL LF +M       +  T   VL AC  ++N + G  
Sbjct: 198 EKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQ 257

Query: 163 VHGHVVKCGLDLDLFVGNALIAFYSKC-------------------------------QD 222
           V  ++ +  ++++L + NA++  Y+KC                               +D
Sbjct: 258 VCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISED 317

Query: 223 VETARKVFDDMSLRDIVSWNSMIVGYTLNGKEDEAIMFFHAMLHNQADCTPDSATLVAIL 282
            E AR+V + M  +DIV+WN++I  Y  NGK +EA++ FH  L  Q +   +  TLV+ L
Sbjct: 318 YEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHE-LQLQKNMKLNQITLVSTL 377

Query: 283 PACATKSASQVGFWVHSYVIKTGIEVGAPLGSCLICMYGNCGHVNIARDVFDRIDDKNVI 342
            ACA   A ++G W+HSY+ K GI +   + S LI MY  CG +  +R+VF+ ++ ++V 
Sbjct: 378 SACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVF 437

Query: 343 VWSAIIRCYGMHGFADEAFNMFRRLEEAGVKPDGLIFLNLLSACSHAGLVAKGREIYEKM 402
           VWSA+I    MHG  +EA +MF +++EA VKP+G+ F N+  ACSH GLV +   ++ +M
Sbjct: 438 VWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQM 497

Query: 403 EA-YGLERKDNHYACMVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLGACRIHNNLEL 462
           E+ YG+  ++ HYAC+VD+LGR+G+LE+AV+FIE MP+     V+GALLGAC+IH NL L
Sbjct: 498 ESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNL 557

Query: 463 AKEVGEKLFILDPEKASRYVTLATMYEDAGQWEDAAKLRKLLRDRNIRKPAGCSSIEVDR 522
           A+    +L  L+P     +V L+ +Y   G+WE+ ++LRK +R   ++K  GCSSIE+D 
Sbjct: 558 AEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDG 617

Query: 523 IHHVFGKKDETHPLTEEIFDTL-EKLERIMEEDFEP 526
           + H F   D  HP++E+++  L E +E++    +EP
Sbjct: 618 MIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEP 648

[Close]
BLAST of CSPI03G00460 vs. ExPASy Swiss-Prot
Match: Q7Y211 (Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H81 PE=2 SV=2)

HSP 1 Score: 351.3 bits (900), Expect = 1.9e-95
Identity = 191/492 (38.82%), Postives = 284/492 (57.72%), Query Frame = 0 

Query: 48  HCRSIRSVQELHAQILVEG-LDQNGFVAAKLIGKYVEHDEGEVKMGTARKVFDTLVRRDV 107
           H   +R+ +ELHA  L  G LD+N FV + L+  Y    +    + + R+VFD +  R +
Sbjct: 314 HLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQ----VLSGRRVFDGMFDRKI 373

Query: 108 FVWNVVIQGYASLGPFVEALNLFDEMRVS-GEPTNRYTFPFVLKACGAMKNSDKGEIVHG 167
            +WN +I GY+      EAL LF  M  S G   N  T   V+ AC       + E +HG
Sbjct: 374 GLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHG 433

Query: 168 HVVKCGLDLDLFVGNALIAFYSKCQDVETARKVFDDMSLRDIVSWNSMIVGYTLNGKEDE 227
            VVK GLD D FV N L+  YS+   ++ A ++F  M  RD+V+WN+MI GY  +   ++
Sbjct: 434 FVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHED 493

Query: 228 AIMFFHAMLH---------NQADCTPDSATLVAILPACATKSASQVGFWVHSYVIKTGIE 287
           A++  H M +         ++    P+S TL+ ILP+CA  SA   G  +H+Y IK  + 
Sbjct: 494 ALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLA 553

Query: 288 VGAPLGSCLICMYGNCGHVNIARDVFDRIDDKNVIVWSAIIRCYGMHGFADEAFNMFRRL 347
               +GS L+ MY  CG + ++R VFD+I  KNVI W+ II  YGMHG   EA ++ R +
Sbjct: 554 TDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMM 613

Query: 348 EEAGVKPDGLIFLNLLSACSHAGLVAKGREIYEKMEA-YGLERKDNHYACMVDLLGRAGF 407
              GVKP+ + F+++ +ACSH+G+V +G  I+  M+  YG+E   +HYAC+VDLLGRAG 
Sbjct: 614 MVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGR 673

Query: 408 LEQAVEFIEGMPVQAGK-DVYGALLGACRIHNNLELAKEVGEKLFILDPEKASRYVTLAT 467
           +++A + +  MP    K   + +LLGA RIHNNLE+ +   + L  L+P  AS YV LA 
Sbjct: 674 IKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLAN 733

Query: 468 MYEDAGQWEDAAKLRKLLRDRNIRKPAGCSSIEVDRIHHVFGKKDETHPLTEEIFDTLEK 526
           +Y  AG W+ A ++R+ ++++ +RK  GCS IE     H F   D +HP +E++   LE 
Sbjct: 734 IYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLET 793

[Close]
BLAST of CSPI03G00460 vs. ExPASy Swiss-Prot
Match: Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)

HSP 1 Score: 345.5 bits (885), Expect = 1.1e-93
Identity = 184/517 (35.59%), Postives = 288/517 (55.71%), Query Frame = 0 

Query: 38  DSYGFIKLLGHC---RSIRSVQELHAQILVEGLDQNGFVAAKLIGKYVEHD--------- 97
           +SY F  +L  C   ++ +  Q++H  +L  G D + +V   LI  YV++          
Sbjct: 133 NSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVF 192

Query: 98  ---------------EGEVKMG---TARKVFDTLVRRDVFVWNVVIQGYASLGPFVEALN 157
                          +G    G    A+K+FD +  +DV  WN +I GYA  G + EAL 
Sbjct: 193 DKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALE 252

Query: 158 LFDEMRVSGEPTNRYTFPFVLKACGAMKNSDKGEIVHGHVVKCGLDLDLFVGNALIAFYS 217
           LF +M  +    +  T   V+ AC    + + G  VH  +   G   +L + NALI  YS
Sbjct: 253 LFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYS 312

Query: 218 KCQDVETARKVFDDMSLRDIVSWNSMIVGYTLNGKEDEAIMFFHAMLHNQADCTPDSATL 277
           KC ++ETA  +F+ +  +D++SWN++I GYT      EA++ F  ML +    TP+  T+
Sbjct: 313 KCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGE--TPNDVTM 372

Query: 278 VAILPACATKSASQVGFWVHSYVIK--TGIEVGAPLGSCLICMYGNCGHVNIARDVFDRI 337
           ++ILPACA   A  +G W+H Y+ K   G+   + L + LI MY  CG +  A  VF+ I
Sbjct: 373 LSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSI 432

Query: 338 DDKNVIVWSAIIRCYGMHGFADEAFNMFRRLEEAGVKPDGLIFLNLLSACSHAGLVAKGR 397
             K++  W+A+I  + MHG AD +F++F R+ + G++PD + F+ LLSACSH+G++  GR
Sbjct: 433 LHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGR 492

Query: 398 EIYEKM-EAYGLERKDNHYACMVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLGACRI 457
            I+  M + Y +  K  HY CM+DLLG +G  ++A E I  M ++    ++ +LL AC++
Sbjct: 493 HIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKM 552

Query: 458 HNNLELAKEVGEKLFILDPEKASRYVTLATMYEDAGQWEDAAKLRKLLRDRNIRKPAGCS 517
           H N+EL +   E L  ++PE    YV L+ +Y  AG+W + AK R LL D+ ++K  GCS
Sbjct: 553 HGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCS 612

Query: 518 SIEVDRIHHVFGKKDETHPLTEEIFDTLEKLERIMEE 522
           SIE+D + H F   D+ HP   EI+  LE++E ++E+
Sbjct: 613 SIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEK 647

[Close]
BLAST of CSPI03G00460 vs. ExPASy Swiss-Prot
Match: Q9FI80 (Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H38 PE=2 SV=1)

HSP 1 Score: 339.3 bits (869), Expect = 7.5e-92
Identity = 184/532 (34.59%), Postives = 291/532 (54.70%), Query Frame = 0 

Query: 46  LGHCRSIRSVQELHAQILVEGLDQNGFVAAKLIGKYVEHDEGEVKMGTARKVFDTLVRRD 105
           + +CR+IR + ++HA  +  G  ++   AA+++      D     +  A K+F+ + +R+
Sbjct: 30  INNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRN 89

Query: 106 VFVWNVVIQGYASL--GPFVEALNLFDEMRVSGE--PTNRYTFPFVLKACGAMKNSDKGE 165
            F WN +I+G++       + A+ LF EM +S E    NR+TFP VLKAC       +G+
Sbjct: 90  CFSWNTIIRGFSESDEDKALIAITLFYEM-MSDEFVEPNRFTFPSVLKACAKTGKIQEGK 149

Query: 166 IVHGHVVKCGLDLDLFVGNALIAFYSKC-------------------------------- 225
            +HG  +K G   D FV + L+  Y  C                                
Sbjct: 150 QIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEI 209

Query: 226 -------------QDVETARKVFDDMSLRDIVSWNSMIVGYTLNGKEDEAIMFFHAMLHN 285
                         D + AR +FD M  R +VSWN+MI GY+LNG   +A+  F  M   
Sbjct: 210 VLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREM--K 269

Query: 286 QADCTPDSATLVAILPACATKSASQVGFWVHSYVIKTGIEVGAPLGSCLICMYGNCGHVN 345
           + D  P+  TLV++LPA +   + ++G W+H Y   +GI +   LGS LI MY  CG + 
Sbjct: 270 KGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIE 329

Query: 346 IARDVFDRIDDKNVIVWSAIIRCYGMHGFADEAFNMFRRLEEAGVKPDGLIFLNLLSACS 405
            A  VF+R+  +NVI WSA+I  + +HG A +A + F ++ +AGV+P  + ++NLL+ACS
Sbjct: 330 KAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACS 389

Query: 406 HAGLVAKGREIYEKMEAY-GLERKDNHYACMVDLLGRAGFLEQAVEFIEGMPVQAGKDVY 465
           H GLV +GR  + +M +  GLE +  HY CMVDLLGR+G L++A EFI  MP++    ++
Sbjct: 390 HGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIW 449

Query: 466 GALLGACRIHNNLELAKEVGEKLFILDPEKASRYVTLATMYEDAGQWEDAAKLRKLLRDR 525
            ALLGACR+  N+E+ K V   L  + P  +  YV L+ MY   G W + +++R  ++++
Sbjct: 450 KALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEK 509

Query: 526 NIRKPAGCSSIEVDRIHHVFGKKDETHPLTEEIFDTLEKL-ERIMEEDFEPI 527
           +IRK  GCS I++D + H F  +D++HP  +EI   L ++ +++    + PI
Sbjct: 510 DIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPI 558

[Close]
BLAST of CSPI03G00460 vs. ExPASy TrEMBL
Match: A0A0A0L101 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G002500 PE=4 SV=1)

HSP 1 Score: 1065.8 bits (2755), Expect = 5.6e-308
Identity = 518/526 (98.48%), Postives = 518/526 (98.48%), Query Frame = 0 

Query: 1   MNGLCRRTWQALTFRNQPFFRLLRSFFSEWSFGKYHRDSYGFIKLLGHCRSIRSVQELHA 60
           MNGLCRRTWQALTFRNQP       FFSEWSFGKYHRDSYGFIKLLGHCRSIRSVQELHA
Sbjct: 1   MNGLCRRTWQALTFRNQP-------FFSEWSFGKYHRDSYGFIKLLGHCRSIRSVQELHA 60

Query: 61  QILVEGLDQNGFVAAKLIGKYVEHDEGEVKMGTARKVFDTLVRRDVFVWNVVIQGYASLG 120
           QILVEGLDQNGFVAAKLIGKYVEHDEGEVKMGTARKVFDTLVRRDVFVWNVVIQGYASLG
Sbjct: 61  QILVEGLDQNGFVAAKLIGKYVEHDEGEVKMGTARKVFDTLVRRDVFVWNVVIQGYASLG 120

Query: 121 PFVEALNLFDEMRVSGEPTNRYTFPFVLKACGAMKNSDKGEIVHGHVVKCGLDLDLFVGN 180
           PFVEALNLFDEMRVSGEPTNRYTFPFVLKACGAMKNSDKGEIVHGHVVKCGLDLDLFVGN
Sbjct: 121 PFVEALNLFDEMRVSGEPTNRYTFPFVLKACGAMKNSDKGEIVHGHVVKCGLDLDLFVGN 180

Query: 181 ALIAFYSKCQDVETARKVFDDMSLRDIVSWNSMIVGYTLNGKEDEAIMFFHAMLHNQADC 240
           ALIAFYSKCQDVETARKVFDDMSLRDIVSWNSMIVGYTLNGKEDEAIMFFHAMLHNQADC
Sbjct: 181 ALIAFYSKCQDVETARKVFDDMSLRDIVSWNSMIVGYTLNGKEDEAIMFFHAMLHNQADC 240

Query: 241 TPDSATLVAILPACATKSASQVGFWVHSYVIKTGIEVGAPLGSCLICMYGNCGHVNIARD 300
           TPDSATLVAILPACATKSASQVGFWVHSYVIKTGIEVGAPLGSCLICMYGNCGHVNIARD
Sbjct: 241 TPDSATLVAILPACATKSASQVGFWVHSYVIKTGIEVGAPLGSCLICMYGNCGHVNIARD 300

Query: 301 VFDRIDDKNVIVWSAIIRCYGMHGFADEAFNMFRRLEEAGVKPDGLIFLNLLSACSHAGL 360
           VFDRIDDKNVIVWSAIIRCYGMHGFADEAFNMFRRLEEAGVKPDGLIFLNLLSACSHAGL
Sbjct: 301 VFDRIDDKNVIVWSAIIRCYGMHGFADEAFNMFRRLEEAGVKPDGLIFLNLLSACSHAGL 360

Query: 361 VAKGREIYEKMEAYGLERKDNHYACMVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLG 420
           VAKG EIYEKMEAYGLERKDNHYACMVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLG
Sbjct: 361 VAKGHEIYEKMEAYGLERKDNHYACMVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLG 420

Query: 421 ACRIHNNLELAKEVGEKLFILDPEKASRYVTLATMYEDAGQWEDAAKLRKLLRDRNIRKP 480
           ACRIHNNLELAKEVGEKLFILDPEKASRYVTLATMYEDAGQWEDAAKLRKLLRDRNIRKP
Sbjct: 421 ACRIHNNLELAKEVGEKLFILDPEKASRYVTLATMYEDAGQWEDAAKLRKLLRDRNIRKP 480

Query: 481 AGCSSIEVDRIHHVFGKKDETHPLTEEIFDTLEKLERIMEEDFEPI 527
           AGCSSIEVDRIHHVFGKKDETHPLTEEIFDTLEKLERIMEEDFEPI
Sbjct: 481 AGCSSIEVDRIHHVFGKKDETHPLTEEIFDTLEKLERIMEEDFEPI 519

[Close]
BLAST of CSPI03G00460 vs. ExPASy TrEMBL
Match: A0A5A7UCB1 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G00430 PE=4 SV=1)

HSP 1 Score: 961.4 bits (2484), Expect = 1.5e-276
Identity = 464/526 (88.21%), Postives = 488/526 (92.78%), Query Frame = 0 

Query: 1   MNGLCRRTWQALTFRNQPFFRLLRSFFSEWSFGKYHRDSYGFIKLLGHCRSIRSVQELHA 60
           MNGL RRTWQALTFR+QP       FFSE   GKYHRDSY F+KLLGHCR+IRSVQELHA
Sbjct: 1   MNGLYRRTWQALTFRSQP-------FFSERRSGKYHRDSYDFMKLLGHCRTIRSVQELHA 60

Query: 61  QILVEGLDQNGFVAAKLIGKYVEHDEGEVKMGTARKVFDTLVRRDVFVWNVVIQGYASLG 120
           QILVEGLDQNGF+A KLIGKYVE  EGE KMGTARKVFD L++RDVF+WNVVIQGYAS G
Sbjct: 61  QILVEGLDQNGFLATKLIGKYVELGEGESKMGTARKVFDRLLQRDVFLWNVVIQGYASFG 120

Query: 121 PFVEALNLFDEMRVSGEPTNRYTFPFVLKACGAMKNSDKGEIVHGHVVKCGLDLDLFVGN 180
           PFVEALNLFDEMRVSGEPTNRYTFPFVLKACGA+KNSDKGEIVHG+VVKCGLDLDLFVGN
Sbjct: 121 PFVEALNLFDEMRVSGEPTNRYTFPFVLKACGALKNSDKGEIVHGYVVKCGLDLDLFVGN 180

Query: 181 ALIAFYSKCQDVETARKVFDDMSLRDIVSWNSMIVGYTLNGKEDEAIMFFHAMLHNQADC 240
           ALI+ YSKCQDVETARKVFDDMSLRD VSWNSMIVGYTLN +ED+AIMFFHAMLHNQADC
Sbjct: 181 ALISCYSKCQDVETARKVFDDMSLRDTVSWNSMIVGYTLNEREDDAIMFFHAMLHNQADC 240

Query: 241 TPDSATLVAILPACATKSASQVGFWVHSYVIKTGIEVGAPLGSCLICMYGNCGHVNIARD 300
            PD ATLVAILPACATKSASQVGFWVHSY+IKTG+EVGA LGSCLI MYGNCGH+NIARD
Sbjct: 241 LPDDATLVAILPACATKSASQVGFWVHSYIIKTGMEVGASLGSCLISMYGNCGHINIARD 300

Query: 301 VFDRIDDKNVIVWSAIIRCYGMHGFADEAFNMFRRLEEAGVKPDGLIFLNLLSACSHAGL 360
           VF+RID+KNVIVWSAIIRCYGMHG ADEA NMFRRLEE GVKPDGLIFLNLLSACSHAGL
Sbjct: 301 VFNRIDNKNVIVWSAIIRCYGMHGLADEALNMFRRLEEVGVKPDGLIFLNLLSACSHAGL 360

Query: 361 VAKGREIYEKMEAYGLERKDNHYACMVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLG 420
           VAKGREIY+KMEAYGLER D HYACMVDLL RAGFLEQA EFIE MPVQAGKDVYGAL G
Sbjct: 361 VAKGREIYKKMEAYGLERNDKHYACMVDLLARAGFLEQAAEFIEAMPVQAGKDVYGALFG 420

Query: 421 ACRIHNNLELAKEVGEKLFILDPEKASRYVTLATMYEDAGQWEDAAKLRKLLRDRNIRKP 480
           ACRIHNNLELAKEVGEKLFILDPE A RY+ LA+MYEDAGQWEDAAK+RKLLRDRNI+KP
Sbjct: 421 ACRIHNNLELAKEVGEKLFILDPENAGRYMILASMYEDAGQWEDAAKVRKLLRDRNIKKP 480

Query: 481 AGCSSIEVDRIHHVFGKKDETHPLTEEIFDTLEKLERIMEEDFEPI 527
           AGCSSIEVDRIHHVFGKKDETHP TEEIFDT+EKLER+MEEDFEPI
Sbjct: 481 AGCSSIEVDRIHHVFGKKDETHPFTEEIFDTIEKLERLMEEDFEPI 519

[Close]
BLAST of CSPI03G00460 vs. ExPASy TrEMBL
Match: A0A1S3BMB7 (pentatricopeptide repeat-containing protein At2g29760, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103491107 PE=4 SV=1)

HSP 1 Score: 961.4 bits (2484), Expect = 1.5e-276
Identity = 464/526 (88.21%), Postives = 488/526 (92.78%), Query Frame = 0 

Query: 1   MNGLCRRTWQALTFRNQPFFRLLRSFFSEWSFGKYHRDSYGFIKLLGHCRSIRSVQELHA 60
           MNGL RRTWQALTFR+QP       FFSE   GKYHRDSY F+KLLGHCR+IRSVQELHA
Sbjct: 1   MNGLYRRTWQALTFRSQP-------FFSERRSGKYHRDSYDFMKLLGHCRTIRSVQELHA 60

Query: 61  QILVEGLDQNGFVAAKLIGKYVEHDEGEVKMGTARKVFDTLVRRDVFVWNVVIQGYASLG 120
           QILVEGLDQNGF+A KLIGKYVE  EGE KMGTARKVFD L++RDVF+WNVVIQGYAS G
Sbjct: 61  QILVEGLDQNGFLATKLIGKYVELGEGESKMGTARKVFDRLLQRDVFLWNVVIQGYASFG 120

Query: 121 PFVEALNLFDEMRVSGEPTNRYTFPFVLKACGAMKNSDKGEIVHGHVVKCGLDLDLFVGN 180
           PFVEALNLFDEMRVSGEPTNRYTFPFVLKACGA+KNSDKGEIVHG+VVKCGLDLDLFVGN
Sbjct: 121 PFVEALNLFDEMRVSGEPTNRYTFPFVLKACGALKNSDKGEIVHGYVVKCGLDLDLFVGN 180

Query: 181 ALIAFYSKCQDVETARKVFDDMSLRDIVSWNSMIVGYTLNGKEDEAIMFFHAMLHNQADC 240
           ALI+ YSKCQDVETARKVFDDMSLRD VSWNSMIVGYTLN +ED+AIMFFHAMLHNQADC
Sbjct: 181 ALISCYSKCQDVETARKVFDDMSLRDTVSWNSMIVGYTLNEREDDAIMFFHAMLHNQADC 240

Query: 241 TPDSATLVAILPACATKSASQVGFWVHSYVIKTGIEVGAPLGSCLICMYGNCGHVNIARD 300
            PD ATLVAILPACATKSASQVGFWVHSY+IKTG+EVGA LGSCLI MYGNCGH+NIARD
Sbjct: 241 LPDDATLVAILPACATKSASQVGFWVHSYIIKTGMEVGASLGSCLISMYGNCGHINIARD 300

Query: 301 VFDRIDDKNVIVWSAIIRCYGMHGFADEAFNMFRRLEEAGVKPDGLIFLNLLSACSHAGL 360
           VF+RID+KNVIVWSAIIRCYGMHG ADEA NMFRRLEE GVKPDGLIFLNLLSACSHAGL
Sbjct: 301 VFNRIDNKNVIVWSAIIRCYGMHGLADEALNMFRRLEEVGVKPDGLIFLNLLSACSHAGL 360

Query: 361 VAKGREIYEKMEAYGLERKDNHYACMVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLG 420
           VAKGREIY+KMEAYGLER D HYACMVDLL RAGFLEQA EFIE MPVQAGKDVYGAL G
Sbjct: 361 VAKGREIYKKMEAYGLERNDKHYACMVDLLARAGFLEQAAEFIEAMPVQAGKDVYGALFG 420

Query: 421 ACRIHNNLELAKEVGEKLFILDPEKASRYVTLATMYEDAGQWEDAAKLRKLLRDRNIRKP 480
           ACRIHNNLELAKEVGEKLFILDPE A RY+ LA+MYEDAGQWEDAAK+RKLLRDRNI+KP
Sbjct: 421 ACRIHNNLELAKEVGEKLFILDPENAGRYMILASMYEDAGQWEDAAKVRKLLRDRNIKKP 480

Query: 481 AGCSSIEVDRIHHVFGKKDETHPLTEEIFDTLEKLERIMEEDFEPI 527
           AGCSSIEVDRIHHVFGKKDETHP TEEIFDT+EKLER+MEEDFEPI
Sbjct: 481 AGCSSIEVDRIHHVFGKKDETHPFTEEIFDTIEKLERLMEEDFEPI 519

[Close]
BLAST of CSPI03G00460 vs. ExPASy TrEMBL
Match: A0A6J1I919 (pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111470278 PE=4 SV=1)

HSP 1 Score: 924.5 bits (2388), Expect = 2.0e-265
Identity = 443/526 (84.22%), Postives = 477/526 (90.68%), Query Frame = 0 

Query: 1   MNGLCRRTWQALTFRNQPFFRLLRSFFSEWSFGKYHRDSYGFIKLLGHCRSIRSVQELHA 60
           MNGL RR  +AL  R QPFFR LRS F++WS  +YHRDSY + KLL HCRSIRSVQELHA
Sbjct: 1   MNGLYRRYSRALVSRKQPFFRFLRSIFNDWSRREYHRDSYDYTKLLQHCRSIRSVQELHA 60

Query: 61  QILVEGLDQNGFVAAKLIGKYVEHDEGEVKMGTARKVFDTLVRRDVFVWNVVIQGYASLG 120
           QI+VEG DQNGF+A KLIGKY E+  GE KMG ARKVFD L+ +DVFVWNVVIQGYA+ G
Sbjct: 61  QIVVEGHDQNGFLATKLIGKYAEY--GEEKMGIARKVFDRLLEKDVFVWNVVIQGYANWG 120

Query: 121 PFVEALNLFDEMRVSGEPTNRYTFPFVLKACGAMKNSDKGEIVHGHVVKCGLDLDLFVGN 180
           PF EALNL+DEMRV GEPTNRYTFPFVLKACGAMKNS+KG+IVHGHV+KCGLDLDLFVGN
Sbjct: 121 PFAEALNLYDEMRVGGEPTNRYTFPFVLKACGAMKNSEKGKIVHGHVLKCGLDLDLFVGN 180

Query: 181 ALIAFYSKCQDVETARKVFDDMSLRDIVSWNSMIVGYTLNGKEDEAIMFFHAMLHNQADC 240
           ALIAFYSKCQDVETARKVFD+MSLRDIVSWNSMI GYTLNGK DEAIM FHAMLHNQ  C
Sbjct: 181 ALIAFYSKCQDVETARKVFDEMSLRDIVSWNSMIAGYTLNGKVDEAIMLFHAMLHNQTAC 240

Query: 241 TPDSATLVAILPACATKSASQVGFWVHSYVIKTGIEVGAPLGSCLICMYGNCGHVNIARD 300
           +PD+ATLV ILPAC TKSASQVGFWVHSYVIKTG+EVGAPLGSCLI MY NCGHVNIARD
Sbjct: 241 SPDNATLVGILPACVTKSASQVGFWVHSYVIKTGMEVGAPLGSCLISMYANCGHVNIARD 300

Query: 301 VFDRIDDKNVIVWSAIIRCYGMHGFADEAFNMFRRLEEAGVKPDGLIFLNLLSACSHAGL 360
           VFDRI DKNVIVWSAIIR YGMHGFADEA NMF  LEE G+KPDG+IFLNLLS CSHAGL
Sbjct: 301 VFDRIKDKNVIVWSAIIRSYGMHGFADEALNMFTSLEEVGLKPDGVIFLNLLSTCSHAGL 360

Query: 361 VAKGREIYEKMEAYGLERKDNHYACMVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLG 420
           V KGREIYEKMEAYG ERK+ HYACMVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLG
Sbjct: 361 VEKGREIYEKMEAYGAERKEEHYACMVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLG 420

Query: 421 ACRIHNNLELAKEVGEKLFILDPEKASRYVTLATMYEDAGQWEDAAKLRKLLRDRNIRKP 480
           ACRIHNN+ELAKEVG+KLF+LDPE A RYV LA+MYEDAGQWEDAAKLRKLLRDRNIRKP
Sbjct: 421 ACRIHNNIELAKEVGDKLFVLDPENAGRYVILASMYEDAGQWEDAAKLRKLLRDRNIRKP 480

Query: 481 AGCSSIEVDRIHHVFGKKDETHPLTEEIFDTLEKLERIMEEDFEPI 527
            GCSSIE+DRI+HVFGK+DE+HP TE+IFDTLEKLER+M+E+FEPI
Sbjct: 481 VGCSSIEIDRINHVFGKEDESHPFTEQIFDTLEKLERVMDENFEPI 524

[Close]
BLAST of CSPI03G00460 vs. ExPASy TrEMBL
Match: A0A6J1FMZ9 (pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111447289 PE=4 SV=1)

HSP 1 Score: 921.8 bits (2381), Expect = 1.3e-264
Identity = 440/526 (83.65%), Postives = 478/526 (90.87%), Query Frame = 0 

Query: 1   MNGLCRRTWQALTFRNQPFFRLLRSFFSEWSFGKYHRDSYGFIKLLGHCRSIRSVQELHA 60
           MNGL RR+ +AL  RN+PFFR LRS F++WS  +YHRDSY + KLL HCRSIRSV+ELHA
Sbjct: 1   MNGLYRRSSRALVSRNRPFFRFLRSIFNDWSRREYHRDSYDYTKLLQHCRSIRSVEELHA 60

Query: 61  QILVEGLDQNGFVAAKLIGKYVEHDEGEVKMGTARKVFDTLVRRDVFVWNVVIQGYASLG 120
           QI+VEG DQNGF+A KLIGKY E+  GE KM  ARKVFD L+ +DVFVWNVVIQGYA+ G
Sbjct: 61  QIVVEGHDQNGFLATKLIGKYAEY--GEEKMEIARKVFDRLLEKDVFVWNVVIQGYANWG 120

Query: 121 PFVEALNLFDEMRVSGEPTNRYTFPFVLKACGAMKNSDKGEIVHGHVVKCGLDLDLFVGN 180
           PF EALNL+DEMRV GEPTNRYTFPFVLKACGAMKN DKG+IVHGHV+KCGLDLDLFVGN
Sbjct: 121 PFAEALNLYDEMRVGGEPTNRYTFPFVLKACGAMKNGDKGKIVHGHVLKCGLDLDLFVGN 180

Query: 181 ALIAFYSKCQDVETARKVFDDMSLRDIVSWNSMIVGYTLNGKEDEAIMFFHAMLHNQADC 240
           ALIAFYSKCQDVETARKVFD+MSLRDIVSWNSMI GYTLNGK DEAIM FHAMLHNQ  C
Sbjct: 181 ALIAFYSKCQDVETARKVFDEMSLRDIVSWNSMIAGYTLNGKVDEAIMLFHAMLHNQTAC 240

Query: 241 TPDSATLVAILPACATKSASQVGFWVHSYVIKTGIEVGAPLGSCLICMYGNCGHVNIARD 300
           +PD+ATLV ILPAC TKSASQVGFWVHSYVIKTG+EVGAPLGSCLI MY NCGHVN+ARD
Sbjct: 241 SPDNATLVGILPACVTKSASQVGFWVHSYVIKTGMEVGAPLGSCLISMYANCGHVNVARD 300

Query: 301 VFDRIDDKNVIVWSAIIRCYGMHGFADEAFNMFRRLEEAGVKPDGLIFLNLLSACSHAGL 360
           VFDRI DKNVIVWSAIIR YGMHGFADEA NMF  LEEAG+KPDG+IFLNLLS CSHAGL
Sbjct: 301 VFDRIKDKNVIVWSAIIRSYGMHGFADEALNMFTSLEEAGLKPDGVIFLNLLSTCSHAGL 360

Query: 361 VAKGREIYEKMEAYGLERKDNHYACMVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLG 420
           V KGREIYEKMEAYG ERK+ HYACMVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLG
Sbjct: 361 VEKGREIYEKMEAYGAERKEEHYACMVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLG 420

Query: 421 ACRIHNNLELAKEVGEKLFILDPEKASRYVTLATMYEDAGQWEDAAKLRKLLRDRNIRKP 480
           ACRIHNN+ELAK+VG+KLF+LDPE A RYV LA+MYEDAGQWEDAAKLRKLLRDRNIRKP
Sbjct: 421 ACRIHNNIELAKKVGDKLFVLDPENAGRYVILASMYEDAGQWEDAAKLRKLLRDRNIRKP 480

Query: 481 AGCSSIEVDRIHHVFGKKDETHPLTEEIFDTLEKLERIMEEDFEPI 527
            GCSSIE+DRI+HVFGK+DE+HP TE+IFDTLEKLER+M+E+FEPI
Sbjct: 481 VGCSSIEIDRINHVFGKEDESHPFTEQIFDTLEKLERVMDENFEPI 524

[Close]
BLAST of CSPI03G00460 vs. NCBI nr
Match: XP_011650274.1 (pentatricopeptide repeat-containing protein At3g46790, chloroplastic [Cucumis sativus] >KGN55630.1 hypothetical protein Csa_011363 [Cucumis sativus])

HSP 1 Score: 1065.8 bits (2755), Expect = 1.2e-307
Identity = 518/526 (98.48%), Postives = 518/526 (98.48%), Query Frame = 0 

Query: 1   MNGLCRRTWQALTFRNQPFFRLLRSFFSEWSFGKYHRDSYGFIKLLGHCRSIRSVQELHA 60
           MNGLCRRTWQALTFRNQP       FFSEWSFGKYHRDSYGFIKLLGHCRSIRSVQELHA
Sbjct: 1   MNGLCRRTWQALTFRNQP-------FFSEWSFGKYHRDSYGFIKLLGHCRSIRSVQELHA 60

Query: 61  QILVEGLDQNGFVAAKLIGKYVEHDEGEVKMGTARKVFDTLVRRDVFVWNVVIQGYASLG 120
           QILVEGLDQNGFVAAKLIGKYVEHDEGEVKMGTARKVFDTLVRRDVFVWNVVIQGYASLG
Sbjct: 61  QILVEGLDQNGFVAAKLIGKYVEHDEGEVKMGTARKVFDTLVRRDVFVWNVVIQGYASLG 120

Query: 121 PFVEALNLFDEMRVSGEPTNRYTFPFVLKACGAMKNSDKGEIVHGHVVKCGLDLDLFVGN 180
           PFVEALNLFDEMRVSGEPTNRYTFPFVLKACGAMKNSDKGEIVHGHVVKCGLDLDLFVGN
Sbjct: 121 PFVEALNLFDEMRVSGEPTNRYTFPFVLKACGAMKNSDKGEIVHGHVVKCGLDLDLFVGN 180

Query: 181 ALIAFYSKCQDVETARKVFDDMSLRDIVSWNSMIVGYTLNGKEDEAIMFFHAMLHNQADC 240
           ALIAFYSKCQDVETARKVFDDMSLRDIVSWNSMIVGYTLNGKEDEAIMFFHAMLHNQADC
Sbjct: 181 ALIAFYSKCQDVETARKVFDDMSLRDIVSWNSMIVGYTLNGKEDEAIMFFHAMLHNQADC 240

Query: 241 TPDSATLVAILPACATKSASQVGFWVHSYVIKTGIEVGAPLGSCLICMYGNCGHVNIARD 300
           TPDSATLVAILPACATKSASQVGFWVHSYVIKTGIEVGAPLGSCLICMYGNCGHVNIARD
Sbjct: 241 TPDSATLVAILPACATKSASQVGFWVHSYVIKTGIEVGAPLGSCLICMYGNCGHVNIARD 300

Query: 301 VFDRIDDKNVIVWSAIIRCYGMHGFADEAFNMFRRLEEAGVKPDGLIFLNLLSACSHAGL 360
           VFDRIDDKNVIVWSAIIRCYGMHGFADEAFNMFRRLEEAGVKPDGLIFLNLLSACSHAGL
Sbjct: 301 VFDRIDDKNVIVWSAIIRCYGMHGFADEAFNMFRRLEEAGVKPDGLIFLNLLSACSHAGL 360

Query: 361 VAKGREIYEKMEAYGLERKDNHYACMVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLG 420
           VAKG EIYEKMEAYGLERKDNHYACMVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLG
Sbjct: 361 VAKGHEIYEKMEAYGLERKDNHYACMVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLG 420

Query: 421 ACRIHNNLELAKEVGEKLFILDPEKASRYVTLATMYEDAGQWEDAAKLRKLLRDRNIRKP 480
           ACRIHNNLELAKEVGEKLFILDPEKASRYVTLATMYEDAGQWEDAAKLRKLLRDRNIRKP
Sbjct: 421 ACRIHNNLELAKEVGEKLFILDPEKASRYVTLATMYEDAGQWEDAAKLRKLLRDRNIRKP 480

Query: 481 AGCSSIEVDRIHHVFGKKDETHPLTEEIFDTLEKLERIMEEDFEPI 527
           AGCSSIEVDRIHHVFGKKDETHPLTEEIFDTLEKLERIMEEDFEPI
Sbjct: 481 AGCSSIEVDRIHHVFGKKDETHPLTEEIFDTLEKLERIMEEDFEPI 519

[Close]
BLAST of CSPI03G00460 vs. NCBI nr
Match: XP_008449159.1 (PREDICTED: pentatricopeptide repeat-containing protein At2g29760, chloroplastic-like [Cucumis melo] >KAA0052934.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK11391.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 961.4 bits (2484), Expect = 3.1e-276
Identity = 464/526 (88.21%), Postives = 488/526 (92.78%), Query Frame = 0 

Query: 1   MNGLCRRTWQALTFRNQPFFRLLRSFFSEWSFGKYHRDSYGFIKLLGHCRSIRSVQELHA 60
           MNGL RRTWQALTFR+QP       FFSE   GKYHRDSY F+KLLGHCR+IRSVQELHA
Sbjct: 1   MNGLYRRTWQALTFRSQP-------FFSERRSGKYHRDSYDFMKLLGHCRTIRSVQELHA 60

Query: 61  QILVEGLDQNGFVAAKLIGKYVEHDEGEVKMGTARKVFDTLVRRDVFVWNVVIQGYASLG 120
           QILVEGLDQNGF+A KLIGKYVE  EGE KMGTARKVFD L++RDVF+WNVVIQGYAS G
Sbjct: 61  QILVEGLDQNGFLATKLIGKYVELGEGESKMGTARKVFDRLLQRDVFLWNVVIQGYASFG 120

Query: 121 PFVEALNLFDEMRVSGEPTNRYTFPFVLKACGAMKNSDKGEIVHGHVVKCGLDLDLFVGN 180
           PFVEALNLFDEMRVSGEPTNRYTFPFVLKACGA+KNSDKGEIVHG+VVKCGLDLDLFVGN
Sbjct: 121 PFVEALNLFDEMRVSGEPTNRYTFPFVLKACGALKNSDKGEIVHGYVVKCGLDLDLFVGN 180

Query: 181 ALIAFYSKCQDVETARKVFDDMSLRDIVSWNSMIVGYTLNGKEDEAIMFFHAMLHNQADC 240
           ALI+ YSKCQDVETARKVFDDMSLRD VSWNSMIVGYTLN +ED+AIMFFHAMLHNQADC
Sbjct: 181 ALISCYSKCQDVETARKVFDDMSLRDTVSWNSMIVGYTLNEREDDAIMFFHAMLHNQADC 240

Query: 241 TPDSATLVAILPACATKSASQVGFWVHSYVIKTGIEVGAPLGSCLICMYGNCGHVNIARD 300
            PD ATLVAILPACATKSASQVGFWVHSY+IKTG+EVGA LGSCLI MYGNCGH+NIARD
Sbjct: 241 LPDDATLVAILPACATKSASQVGFWVHSYIIKTGMEVGASLGSCLISMYGNCGHINIARD 300

Query: 301 VFDRIDDKNVIVWSAIIRCYGMHGFADEAFNMFRRLEEAGVKPDGLIFLNLLSACSHAGL 360
           VF+RID+KNVIVWSAIIRCYGMHG ADEA NMFRRLEE GVKPDGLIFLNLLSACSHAGL
Sbjct: 301 VFNRIDNKNVIVWSAIIRCYGMHGLADEALNMFRRLEEVGVKPDGLIFLNLLSACSHAGL 360

Query: 361 VAKGREIYEKMEAYGLERKDNHYACMVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLG 420
           VAKGREIY+KMEAYGLER D HYACMVDLL RAGFLEQA EFIE MPVQAGKDVYGAL G
Sbjct: 361 VAKGREIYKKMEAYGLERNDKHYACMVDLLARAGFLEQAAEFIEAMPVQAGKDVYGALFG 420

Query: 421 ACRIHNNLELAKEVGEKLFILDPEKASRYVTLATMYEDAGQWEDAAKLRKLLRDRNIRKP 480
           ACRIHNNLELAKEVGEKLFILDPE A RY+ LA+MYEDAGQWEDAAK+RKLLRDRNI+KP
Sbjct: 421 ACRIHNNLELAKEVGEKLFILDPENAGRYMILASMYEDAGQWEDAAKVRKLLRDRNIKKP 480

Query: 481 AGCSSIEVDRIHHVFGKKDETHPLTEEIFDTLEKLERIMEEDFEPI 527
           AGCSSIEVDRIHHVFGKKDETHP TEEIFDT+EKLER+MEEDFEPI
Sbjct: 481 AGCSSIEVDRIHHVFGKKDETHPFTEEIFDTIEKLERLMEEDFEPI 519

[Close]
BLAST of CSPI03G00460 vs. NCBI nr
Match: XP_038905146.1 (pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 931.4 bits (2406), Expect = 3.4e-267
Identity = 447/526 (84.98%), Postives = 481/526 (91.44%), Query Frame = 0 

Query: 1   MNGLCRRTWQALTFRNQPFFRLLRSFFSEWSFGKYHRDSYGFIKLLGHCRSIRSVQELHA 60
           MN LCRRT QAL  RNQP FRLLRSFFS+ S GKYHRDSY + KLL HCR+IRSVQ LHA
Sbjct: 1   MNELCRRTPQALASRNQPCFRLLRSFFSDRSSGKYHRDSYDYTKLLDHCRTIRSVQGLHA 60

Query: 61  QILVEGLDQNGFVAAKLIGKYVEHDEGEVKMGTARKVFDTLVRRDVFVWNVVIQGYASLG 120
           QI+VEG DQNGF+A KLIGKYVEH  GE KMG ARKVFD L++RDVFVWNVVIQGYA+LG
Sbjct: 61  QIIVEGQDQNGFLATKLIGKYVEH--GESKMGIARKVFDKLLQRDVFVWNVVIQGYANLG 120

Query: 121 PFVEALNLFDEMRVSGEPTNRYTFPFVLKACGAMKNSDKGEIVHGHVVKCGLDLDLFVGN 180
           PFVEALNLFDEMRVSG PTNRYTFPFVLKACGAMKNSDKG+IVHGHV+KCGLDLDLFV N
Sbjct: 121 PFVEALNLFDEMRVSGAPTNRYTFPFVLKACGAMKNSDKGKIVHGHVLKCGLDLDLFVSN 180

Query: 181 ALIAFYSKCQDVETARKVFDDMSLRDIVSWNSMIVGYTLNGKEDEAIMFFHAMLHNQADC 240
           ALIAFY+KCQDVETARKVFD+MSLRDIVSWNSMI GYTLN K ++AIM FHAMLHNQ+ C
Sbjct: 181 ALIAFYAKCQDVETARKVFDEMSLRDIVSWNSMIAGYTLNEKVEDAIMLFHAMLHNQSAC 240

Query: 241 TPDSATLVAILPACATKSASQVGFWVHSYVIKTGIEVGAPLGSCLICMYGNCGHVNIARD 300
           +PDSATL+ ILPAC TKSASQVGFWVHSYVIKTG+EVGA LGSCLI +Y NCGHVNIARD
Sbjct: 241 SPDSATLLGILPACVTKSASQVGFWVHSYVIKTGMEVGAQLGSCLISVYANCGHVNIARD 300

Query: 301 VFDRIDDKNVIVWSAIIRCYGMHGFADEAFNMFRRLEEAGVKPDGLIFLNLLSACSHAGL 360
           VF+RIDDKNVIVWSAIIRCYGMHGFADEA NMF RLEEAG+KPDG++FLNLLS CSHAGL
Sbjct: 301 VFNRIDDKNVIVWSAIIRCYGMHGFADEALNMFTRLEEAGLKPDGVLFLNLLSTCSHAGL 360

Query: 361 VAKGREIYEKMEAYGLERKDNHYACMVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLG 420
           +AKG EIYEKME YG+ERK+ HYACMVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLG
Sbjct: 361 IAKGHEIYEKMEGYGVERKEEHYACMVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLG 420

Query: 421 ACRIHNNLELAKEVGEKLFILDPEKASRYVTLATMYEDAGQWEDAAKLRKLLRDRNIRKP 480
           ACRIH N+ELAKE+GEKLFILD + A RY+ LA+MYEDAGQWEDAAKLRKLLRDRN+RKP
Sbjct: 421 ACRIHKNIELAKEIGEKLFILDSQNAGRYMILASMYEDAGQWEDAAKLRKLLRDRNVRKP 480

Query: 481 AGCSSIEVDRIHHVFGKKDETHPLTEEIFDTLEKLERIMEEDFEPI 527
            GCSSIEVDRIHHVFGK+DETHP TE+IFDTLEKLE IME DFEPI
Sbjct: 481 VGCSSIEVDRIHHVFGKEDETHPFTEQIFDTLEKLESIMEADFEPI 524

[Close]
BLAST of CSPI03G00460 vs. NCBI nr
Match: XP_022971604.1 (pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 924.5 bits (2388), Expect = 4.2e-265
Identity = 443/526 (84.22%), Postives = 477/526 (90.68%), Query Frame = 0 

Query: 1   MNGLCRRTWQALTFRNQPFFRLLRSFFSEWSFGKYHRDSYGFIKLLGHCRSIRSVQELHA 60
           MNGL RR  +AL  R QPFFR LRS F++WS  +YHRDSY + KLL HCRSIRSVQELHA
Sbjct: 1   MNGLYRRYSRALVSRKQPFFRFLRSIFNDWSRREYHRDSYDYTKLLQHCRSIRSVQELHA 60

Query: 61  QILVEGLDQNGFVAAKLIGKYVEHDEGEVKMGTARKVFDTLVRRDVFVWNVVIQGYASLG 120
           QI+VEG DQNGF+A KLIGKY E+  GE KMG ARKVFD L+ +DVFVWNVVIQGYA+ G
Sbjct: 61  QIVVEGHDQNGFLATKLIGKYAEY--GEEKMGIARKVFDRLLEKDVFVWNVVIQGYANWG 120

Query: 121 PFVEALNLFDEMRVSGEPTNRYTFPFVLKACGAMKNSDKGEIVHGHVVKCGLDLDLFVGN 180
           PF EALNL+DEMRV GEPTNRYTFPFVLKACGAMKNS+KG+IVHGHV+KCGLDLDLFVGN
Sbjct: 121 PFAEALNLYDEMRVGGEPTNRYTFPFVLKACGAMKNSEKGKIVHGHVLKCGLDLDLFVGN 180

Query: 181 ALIAFYSKCQDVETARKVFDDMSLRDIVSWNSMIVGYTLNGKEDEAIMFFHAMLHNQADC 240
           ALIAFYSKCQDVETARKVFD+MSLRDIVSWNSMI GYTLNGK DEAIM FHAMLHNQ  C
Sbjct: 181 ALIAFYSKCQDVETARKVFDEMSLRDIVSWNSMIAGYTLNGKVDEAIMLFHAMLHNQTAC 240

Query: 241 TPDSATLVAILPACATKSASQVGFWVHSYVIKTGIEVGAPLGSCLICMYGNCGHVNIARD 300
           +PD+ATLV ILPAC TKSASQVGFWVHSYVIKTG+EVGAPLGSCLI MY NCGHVNIARD
Sbjct: 241 SPDNATLVGILPACVTKSASQVGFWVHSYVIKTGMEVGAPLGSCLISMYANCGHVNIARD 300

Query: 301 VFDRIDDKNVIVWSAIIRCYGMHGFADEAFNMFRRLEEAGVKPDGLIFLNLLSACSHAGL 360
           VFDRI DKNVIVWSAIIR YGMHGFADEA NMF  LEE G+KPDG+IFLNLLS CSHAGL
Sbjct: 301 VFDRIKDKNVIVWSAIIRSYGMHGFADEALNMFTSLEEVGLKPDGVIFLNLLSTCSHAGL 360

Query: 361 VAKGREIYEKMEAYGLERKDNHYACMVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLG 420
           V KGREIYEKMEAYG ERK+ HYACMVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLG
Sbjct: 361 VEKGREIYEKMEAYGAERKEEHYACMVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLG 420

Query: 421 ACRIHNNLELAKEVGEKLFILDPEKASRYVTLATMYEDAGQWEDAAKLRKLLRDRNIRKP 480
           ACRIHNN+ELAKEVG+KLF+LDPE A RYV LA+MYEDAGQWEDAAKLRKLLRDRNIRKP
Sbjct: 421 ACRIHNNIELAKEVGDKLFVLDPENAGRYVILASMYEDAGQWEDAAKLRKLLRDRNIRKP 480

Query: 481 AGCSSIEVDRIHHVFGKKDETHPLTEEIFDTLEKLERIMEEDFEPI 527
            GCSSIE+DRI+HVFGK+DE+HP TE+IFDTLEKLER+M+E+FEPI
Sbjct: 481 VGCSSIEIDRINHVFGKEDESHPFTEQIFDTLEKLERVMDENFEPI 524

[Close]
BLAST of CSPI03G00460 vs. NCBI nr
Match: KAG6596261.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 922.9 bits (2384), Expect = 1.2e-264
Identity = 441/526 (83.84%), Postives = 478/526 (90.87%), Query Frame = 0 

Query: 1   MNGLCRRTWQALTFRNQPFFRLLRSFFSEWSFGKYHRDSYGFIKLLGHCRSIRSVQELHA 60
           MNGL RR+ +AL  RN+PFFR LRS F++WS  +YHRDSY + KLL HCRSIRSVQELHA
Sbjct: 1   MNGLYRRSSRALVSRNRPFFRFLRSIFNDWSRREYHRDSYDYTKLLQHCRSIRSVQELHA 60

Query: 61  QILVEGLDQNGFVAAKLIGKYVEHDEGEVKMGTARKVFDTLVRRDVFVWNVVIQGYASLG 120
           QI+VEG DQNGF+A KLIGKY E+  GE KM  ARKVFD L+ +DVFVWNVVIQGYA+ G
Sbjct: 61  QIVVEGHDQNGFLATKLIGKYAEY--GEEKMEIARKVFDRLLEKDVFVWNVVIQGYANWG 120

Query: 121 PFVEALNLFDEMRVSGEPTNRYTFPFVLKACGAMKNSDKGEIVHGHVVKCGLDLDLFVGN 180
           PF EALNL+DEMRV GEPTNRYTFPFVLKACGAMKN DKG+IVHGHV+KCGLDLDLFVGN
Sbjct: 121 PFAEALNLYDEMRVGGEPTNRYTFPFVLKACGAMKNGDKGKIVHGHVLKCGLDLDLFVGN 180

Query: 181 ALIAFYSKCQDVETARKVFDDMSLRDIVSWNSMIVGYTLNGKEDEAIMFFHAMLHNQADC 240
           ALIAFYSKCQDVETARKVFD+MSLRDIVSWNSMI GYTLNGK DEAIM FHAMLHNQ  C
Sbjct: 181 ALIAFYSKCQDVETARKVFDEMSLRDIVSWNSMIAGYTLNGKVDEAIMLFHAMLHNQTAC 240

Query: 241 TPDSATLVAILPACATKSASQVGFWVHSYVIKTGIEVGAPLGSCLICMYGNCGHVNIARD 300
           +PD+ATLV ILPAC TKSASQVGFWVHSYVIKTG+EVGAPLGSCLI MY NCGHVN+ARD
Sbjct: 241 SPDNATLVGILPACVTKSASQVGFWVHSYVIKTGMEVGAPLGSCLISMYANCGHVNVARD 300

Query: 301 VFDRIDDKNVIVWSAIIRCYGMHGFADEAFNMFRRLEEAGVKPDGLIFLNLLSACSHAGL 360
           VFDRI DKNVIVWSAIIR YGMHGFADEA NMF  LEEAG+KPDG+IFLNLLS CSHAGL
Sbjct: 301 VFDRIKDKNVIVWSAIIRSYGMHGFADEALNMFTSLEEAGLKPDGVIFLNLLSTCSHAGL 360

Query: 361 VAKGREIYEKMEAYGLERKDNHYACMVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLG 420
           V KGREIYEKMEAYG ERK+ HYACMVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLG
Sbjct: 361 VEKGREIYEKMEAYGAERKEEHYACMVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLG 420

Query: 421 ACRIHNNLELAKEVGEKLFILDPEKASRYVTLATMYEDAGQWEDAAKLRKLLRDRNIRKP 480
           ACRIHNN+ELAK+VG+KLF+LDPE A RYV LA+MYEDAGQWEDAAKLRKLLRDRNIRKP
Sbjct: 421 ACRIHNNIELAKKVGDKLFVLDPENAGRYVILASMYEDAGQWEDAAKLRKLLRDRNIRKP 480

Query: 481 AGCSSIEVDRIHHVFGKKDETHPLTEEIFDTLEKLERIMEEDFEPI 527
            GCSSIE+DRI+HVFGK+DE+HP TE+IFDTLEKLER+M+E+FEPI
Sbjct: 481 VGCSSIEIDRINHVFGKEDESHPFTEQIFDTLEKLERVMDENFEPI 524

[Close]
BLAST of CSPI03G00460 vs. TAIR 10
Match: AT3G46790.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 364.8 bits (935), Expect = 1.2e-100
Identity = 182/480 (37.92%), Postives = 289/480 (60.21%), Query Frame = 0 

Query: 47  GHCRSIRSVQELHAQILVEGLDQNGFVAAKLIGKYVEHDEGEVKMGTARKVFDTLVRRDV 106
           GH  S+     +H  IL  G DQ+ F+A KLIG Y   D G V    ARKVFD   +R +
Sbjct: 88  GHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMY--SDLGSVDY--ARKVFDKTRKRTI 147

Query: 107 FVWNVVIQGYASLGPFVEALNLFDEMRVSGEPTNRYTFPFVLKACGA----MKNSDKGEI 166
           +VWN + +     G   E L L+ +M   G  ++R+T+ +VLKAC A    + +  KG+ 
Sbjct: 148 YVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKE 207

Query: 167 VHGHVVKCGLDLDLFVGNALIAFYSKCQDVETARKVFDDMSLRDIVSWNSMIVGYTLNGK 226
           +H H+ + G    +++   L+  Y++   V+ A  VF  M +R++VSW++MI  Y  NGK
Sbjct: 208 IHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGK 267

Query: 227 EDEAIMFFHAMLHNQADCTPDSATLVAILPACATKSASQVGFWVHSYVIKTGIEVGAPLG 286
             EA+  F  M+    D +P+S T+V++L ACA+ +A + G  +H Y+++ G++   P+ 
Sbjct: 268 AFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVI 327

Query: 287 SCLICMYGNCGHVNIARDVFDRIDDKNVIVWSAIIRCYGMHGFADEAFNMFRRLEEAGVK 346
           S L+ MYG CG + + + VFDR+ D++V+ W+++I  YG+HG+  +A  +F  +   G  
Sbjct: 328 SALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGAS 387

Query: 347 PDGLIFLNLLSACSHAGLVAKGREIYEKM-EAYGLERKDNHYACMVDLLGRAGFLEQAVE 406
           P  + F+++L ACSH GLV +G+ ++E M   +G++ +  HYACMVDLLGRA  L++A +
Sbjct: 388 PTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAK 447

Query: 407 FIEGMPVQAGKDVYGALLGACRIHNNLELAKEVGEKLFILDPEKASRYVTLATMYEDAGQ 466
            ++ M  + G  V+G+LLG+CRIH N+ELA+    +LF L+P+ A  YV LA +Y +A  
Sbjct: 448 MVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQM 507

Query: 467 WEDAAKLRKLLRDRNIRKPAGCSSIEVDRIHHVFGKKDETHPLTEEIFDTLEKLERIMEE 522
           W++  +++KLL  R ++K  G   +EV R  + F   DE +PL E+I   L KL   M+E
Sbjct: 508 WDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKE 563

[Close]
BLAST of CSPI03G00460 vs. TAIR 10
Match: AT2G29760.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 357.1 bits (915), Expect = 2.5e-98
Identity = 188/516 (36.43%), Postives = 293/516 (56.78%), Query Frame = 0 

Query: 43  IKLLGHCRSIRSVQELHAQILVEGLDQNGFVAAKLIGKYVEHDEGEVKMGTARKVFDTLV 102
           IK      S+   Q LH   +   +  + FVA  LI  Y    +    + +A KVF T+ 
Sbjct: 138 IKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGD----LDSACKVFTTIK 197

Query: 103 RRDVFVWNVVIQGYASLGPFVEALNLFDEMRVSGEPTNRYTFPFVLKACGAMKNSDKGEI 162
            +DV  WN +I G+   G   +AL LF +M       +  T   VL AC  ++N + G  
Sbjct: 198 EKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQ 257

Query: 163 VHGHVVKCGLDLDLFVGNALIAFYSKC-------------------------------QD 222
           V  ++ +  ++++L + NA++  Y+KC                               +D
Sbjct: 258 VCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISED 317

Query: 223 VETARKVFDDMSLRDIVSWNSMIVGYTLNGKEDEAIMFFHAMLHNQADCTPDSATLVAIL 282
            E AR+V + M  +DIV+WN++I  Y  NGK +EA++ FH  L  Q +   +  TLV+ L
Sbjct: 318 YEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHE-LQLQKNMKLNQITLVSTL 377

Query: 283 PACATKSASQVGFWVHSYVIKTGIEVGAPLGSCLICMYGNCGHVNIARDVFDRIDDKNVI 342
            ACA   A ++G W+HSY+ K GI +   + S LI MY  CG +  +R+VF+ ++ ++V 
Sbjct: 378 SACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVF 437

Query: 343 VWSAIIRCYGMHGFADEAFNMFRRLEEAGVKPDGLIFLNLLSACSHAGLVAKGREIYEKM 402
           VWSA+I    MHG  +EA +MF +++EA VKP+G+ F N+  ACSH GLV +   ++ +M
Sbjct: 438 VWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQM 497

Query: 403 EA-YGLERKDNHYACMVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLGACRIHNNLEL 462
           E+ YG+  ++ HYAC+VD+LGR+G+LE+AV+FIE MP+     V+GALLGAC+IH NL L
Sbjct: 498 ESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNL 557

Query: 463 AKEVGEKLFILDPEKASRYVTLATMYEDAGQWEDAAKLRKLLRDRNIRKPAGCSSIEVDR 522
           A+    +L  L+P     +V L+ +Y   G+WE+ ++LRK +R   ++K  GCSSIE+D 
Sbjct: 558 AEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDG 617

Query: 523 IHHVFGKKDETHPLTEEIFDTL-EKLERIMEEDFEP 526
           + H F   D  HP++E+++  L E +E++    +EP
Sbjct: 618 MIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEP 648

[Close]
BLAST of CSPI03G00460 vs. TAIR 10
Match: AT3G57430.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 351.3 bits (900), Expect = 1.4e-96
Identity = 191/492 (38.82%), Postives = 284/492 (57.72%), Query Frame = 0 

Query: 48  HCRSIRSVQELHAQILVEG-LDQNGFVAAKLIGKYVEHDEGEVKMGTARKVFDTLVRRDV 107
           H   +R+ +ELHA  L  G LD+N FV + L+  Y    +    + + R+VFD +  R +
Sbjct: 314 HLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQ----VLSGRRVFDGMFDRKI 373

Query: 108 FVWNVVIQGYASLGPFVEALNLFDEMRVS-GEPTNRYTFPFVLKACGAMKNSDKGEIVHG 167
            +WN +I GY+      EAL LF  M  S G   N  T   V+ AC       + E +HG
Sbjct: 374 GLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHG 433

Query: 168 HVVKCGLDLDLFVGNALIAFYSKCQDVETARKVFDDMSLRDIVSWNSMIVGYTLNGKEDE 227
            VVK GLD D FV N L+  YS+   ++ A ++F  M  RD+V+WN+MI GY  +   ++
Sbjct: 434 FVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHED 493

Query: 228 AIMFFHAMLH---------NQADCTPDSATLVAILPACATKSASQVGFWVHSYVIKTGIE 287
           A++  H M +         ++    P+S TL+ ILP+CA  SA   G  +H+Y IK  + 
Sbjct: 494 ALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLA 553

Query: 288 VGAPLGSCLICMYGNCGHVNIARDVFDRIDDKNVIVWSAIIRCYGMHGFADEAFNMFRRL 347
               +GS L+ MY  CG + ++R VFD+I  KNVI W+ II  YGMHG   EA ++ R +
Sbjct: 554 TDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMM 613

Query: 348 EEAGVKPDGLIFLNLLSACSHAGLVAKGREIYEKMEA-YGLERKDNHYACMVDLLGRAGF 407
              GVKP+ + F+++ +ACSH+G+V +G  I+  M+  YG+E   +HYAC+VDLLGRAG 
Sbjct: 614 MVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGR 673

Query: 408 LEQAVEFIEGMPVQAGK-DVYGALLGACRIHNNLELAKEVGEKLFILDPEKASRYVTLAT 467
           +++A + +  MP    K   + +LLGA RIHNNLE+ +   + L  L+P  AS YV LA 
Sbjct: 674 IKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLAN 733

Query: 468 MYEDAGQWEDAAKLRKLLRDRNIRKPAGCSSIEVDRIHHVFGKKDETHPLTEEIFDTLEK 526
           +Y  AG W+ A ++R+ ++++ +RK  GCS IE     H F   D +HP +E++   LE 
Sbjct: 734 IYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLET 793

[Close]
BLAST of CSPI03G00460 vs. TAIR 10
Match: AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 345.5 bits (885), Expect = 7.5e-95
Identity = 184/517 (35.59%), Postives = 288/517 (55.71%), Query Frame = 0 

Query: 38  DSYGFIKLLGHC---RSIRSVQELHAQILVEGLDQNGFVAAKLIGKYVEHD--------- 97
           +SY F  +L  C   ++ +  Q++H  +L  G D + +V   LI  YV++          
Sbjct: 133 NSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVF 192

Query: 98  ---------------EGEVKMG---TARKVFDTLVRRDVFVWNVVIQGYASLGPFVEALN 157
                          +G    G    A+K+FD +  +DV  WN +I GYA  G + EAL 
Sbjct: 193 DKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALE 252

Query: 158 LFDEMRVSGEPTNRYTFPFVLKACGAMKNSDKGEIVHGHVVKCGLDLDLFVGNALIAFYS 217
           LF +M  +    +  T   V+ AC    + + G  VH  +   G   +L + NALI  YS
Sbjct: 253 LFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYS 312

Query: 218 KCQDVETARKVFDDMSLRDIVSWNSMIVGYTLNGKEDEAIMFFHAMLHNQADCTPDSATL 277
           KC ++ETA  +F+ +  +D++SWN++I GYT      EA++ F  ML +    TP+  T+
Sbjct: 313 KCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGE--TPNDVTM 372

Query: 278 VAILPACATKSASQVGFWVHSYVIK--TGIEVGAPLGSCLICMYGNCGHVNIARDVFDRI 337
           ++ILPACA   A  +G W+H Y+ K   G+   + L + LI MY  CG +  A  VF+ I
Sbjct: 373 LSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSI 432

Query: 338 DDKNVIVWSAIIRCYGMHGFADEAFNMFRRLEEAGVKPDGLIFLNLLSACSHAGLVAKGR 397
             K++  W+A+I  + MHG AD +F++F R+ + G++PD + F+ LLSACSH+G++  GR
Sbjct: 433 LHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGR 492

Query: 398 EIYEKM-EAYGLERKDNHYACMVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLGACRI 457
            I+  M + Y +  K  HY CM+DLLG +G  ++A E I  M ++    ++ +LL AC++
Sbjct: 493 HIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKM 552

Query: 458 HNNLELAKEVGEKLFILDPEKASRYVTLATMYEDAGQWEDAAKLRKLLRDRNIRKPAGCS 517
           H N+EL +   E L  ++PE    YV L+ +Y  AG+W + AK R LL D+ ++K  GCS
Sbjct: 553 HGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCS 612

Query: 518 SIEVDRIHHVFGKKDETHPLTEEIFDTLEKLERIMEE 522
           SIE+D + H F   D+ HP   EI+  LE++E ++E+
Sbjct: 613 SIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEK 647

[Close]
BLAST of CSPI03G00460 vs. TAIR 10
Match: AT5G48910.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 339.3 bits (869), Expect = 5.4e-93
Identity = 184/532 (34.59%), Postives = 291/532 (54.70%), Query Frame = 0 

Query: 46  LGHCRSIRSVQELHAQILVEGLDQNGFVAAKLIGKYVEHDEGEVKMGTARKVFDTLVRRD 105
           + +CR+IR + ++HA  +  G  ++   AA+++      D     +  A K+F+ + +R+
Sbjct: 30  INNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRN 89

Query: 106 VFVWNVVIQGYASL--GPFVEALNLFDEMRVSGE--PTNRYTFPFVLKACGAMKNSDKGE 165
            F WN +I+G++       + A+ LF EM +S E    NR+TFP VLKAC       +G+
Sbjct: 90  CFSWNTIIRGFSESDEDKALIAITLFYEM-MSDEFVEPNRFTFPSVLKACAKTGKIQEGK 149

Query: 166 IVHGHVVKCGLDLDLFVGNALIAFYSKC-------------------------------- 225
            +HG  +K G   D FV + L+  Y  C                                
Sbjct: 150 QIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEI 209

Query: 226 -------------QDVETARKVFDDMSLRDIVSWNSMIVGYTLNGKEDEAIMFFHAMLHN 285
                         D + AR +FD M  R +VSWN+MI GY+LNG   +A+  F  M   
Sbjct: 210 VLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREM--K 269

Query: 286 QADCTPDSATLVAILPACATKSASQVGFWVHSYVIKTGIEVGAPLGSCLICMYGNCGHVN 345
           + D  P+  TLV++LPA +   + ++G W+H Y   +GI +   LGS LI MY  CG + 
Sbjct: 270 KGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIE 329

Query: 346 IARDVFDRIDDKNVIVWSAIIRCYGMHGFADEAFNMFRRLEEAGVKPDGLIFLNLLSACS 405
            A  VF+R+  +NVI WSA+I  + +HG A +A + F ++ +AGV+P  + ++NLL+ACS
Sbjct: 330 KAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACS 389

Query: 406 HAGLVAKGREIYEKMEAY-GLERKDNHYACMVDLLGRAGFLEQAVEFIEGMPVQAGKDVY 465
           H GLV +GR  + +M +  GLE +  HY CMVDLLGR+G L++A EFI  MP++    ++
Sbjct: 390 HGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIW 449

Query: 466 GALLGACRIHNNLELAKEVGEKLFILDPEKASRYVTLATMYEDAGQWEDAAKLRKLLRDR 525
            ALLGACR+  N+E+ K V   L  + P  +  YV L+ MY   G W + +++R  ++++
Sbjct: 450 KALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEK 509

Query: 526 NIRKPAGCSSIEVDRIHHVFGKKDETHPLTEEIFDTLEKL-ERIMEEDFEPI 527
           +IRK  GCS I++D + H F  +D++HP  +EI   L ++ +++    + PI
Sbjct: 510 DIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPI 558

The following BLAST results are available for this feature:
BLAST of CSPI03G00460 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9STF31.7e-9937.92Pentatricopeptide repeat-containing protein At3g46790, chloroplastic OS=Arabidop... [more]
O823803.5e-9736.43Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop... [more]
Q7Y2111.9e-9538.82Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidop... [more]
Q9LN011.1e-9335.59Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... [more]
Q9FI807.5e-9234.59Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana OX... [more]
BLAST of CSPI03G00460 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L1015.6e-30898.48Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G002500 PE=4 SV=1[more]
A0A5A7UCB11.5e-27688.21Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S3BMB71.5e-27688.21pentatricopeptide repeat-containing protein At2g29760, chloroplastic-like OS=Cuc... [more]
A0A6J1I9192.0e-26584.22pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like OS=Cuc... [more]
A0A6J1FMZ91.3e-26483.65pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like OS=Cuc... [more]
BLAST of CSPI03G00460 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011650274.11.2e-30798.48pentatricopeptide repeat-containing protein At3g46790, chloroplastic [Cucumis sa... [more]
XP_008449159.13.1e-27688.21PREDICTED: pentatricopeptide repeat-containing protein At2g29760, chloroplastic-... [more]
XP_038905146.13.4e-26784.98pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like [Benin... [more]
XP_022971604.14.2e-26584.22pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like [Cucur... [more]
KAG6596261.11.2e-26483.84Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a... [more]
BLAST of CSPI03G00460 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G46790.11.2e-10037.92Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT2G29760.12.5e-9836.43Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT3G57430.11.4e-9638.82Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G08070.17.5e-9535.59Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT5G48910.15.4e-9334.59Pentatricopeptide repeat (PPR) superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 108..136
e-value: 1.4E-5
score: 23.0
coord: 312..344
e-value: 1.3E-6
score: 26.2
coord: 208..243
e-value: 1.3E-4
score: 19.9
coord: 180..208
e-value: 6.6E-4
score: 17.7
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 208..235
e-value: 2.2E-5
score: 24.4
coord: 180..205
e-value: 0.077
score: 13.3
coord: 312..341
e-value: 2.6E-5
score: 24.2
coord: 350..375
e-value: 0.065
score: 13.5
coord: 383..406
e-value: 1.1
score: 9.6
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 104..151
e-value: 5.0E-9
score: 36.2
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 309..343
score: 11.651919
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 105..139
score: 10.829822
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 206..236
score: 9.174665
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 283..502
e-value: 3.9E-32
score: 113.8
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 15..157
e-value: 3.8E-14
score: 54.4
coord: 158..263
e-value: 4.8E-19
score: 70.4
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 311..481
NoneNo IPR availablePANTHERPTHR24015:SF1933PPR CONTAINING PLANT-LIKE PROTEINcoord: 30..522
NoneNo IPR availablePANTHERPTHR24015OS07G0578800 PROTEIN-RELATEDcoord: 30..522

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI03G00460.1CSPI03G00460.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009451 RNA modification
cellular_component GO:0043231 intracellular membrane-bounded organelle
molecular_function GO:0005515 protein binding
molecular_function GO:0003723 RNA binding