CSPI02G27800 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGCTTATCTTTCTATGTGCATTCAACCACAGAAAATTCAAGAAGATGTTGGGTAAACTCCAGCACGAGGCAGTTATTGACGTCCCGGCCAACGTGACATGGCAGCTCTTCGGCAGCCTTGAACTTGGACGAATTGTGGGAGAACAACTTCCGAATCTTTTTGAGAAAATCGAATTAGTTGAAGGTGATGGAGGAGAAGGAACTGTTCTTAATCTCATTTTTGCTCCAGGTAACAATTTGTAGTAATCTCTTCCATTGTTTCTTCTTCCCATTCTAAATTTTCGAGAAATTTTTATTGAAAGTCGTTTTATGTGCGATACTCAGTAACAACTCAGACTACACATCTATCTCTGTTCATTCCCTTCAATTACAAGGATAATTTAGACCATCCATTAGGTTTTTTTTTTTAATAACATTAAGATTTAAGATTTTTTTTTGTCAGAGTAGGGTTAATAAATTTAAGATTAGACCATAGAGAATATATATAGTAAAAACCAGAACATTTATTTTTAAAAAAATTTACTACGAATTCAACTTTCTTGAGTAAGAAAGAAGCAAATAGTTAATTTAGAGTATAGGTTCATGTTGAGTATAATTTAATCTAAACGAGCACAATTCACCTACTTTTGATCTTTAACATGCTGAGTCTTGACTTCTGAGACAAACGTGAAAATGTGTGGACATTAATGCAGGTTTAGGTACCTCAAGTTATAAAGAGAAATTTACAAAAATAGATAATGAGAATCGTATAAAAGAGACAGAGATAGTGGAAGGAGGATTCTTGAACATTGGATTTACTCTCTATAGGGTTCGTTTCAAGATAATTGAGAATGGTGAAGATAAGTGTATTGTTGAAACGACAATTGAATATGAAATCATGGAAGAAGCTGCTGCAAATGCTTCACTTGTTACTCTACAACCTCTCATTGAGATTGTTCAACTTGCAAATAACTATCTCCTTCACAACAAAAACCCTAAATAGAGATGCATTAAATCATATGATGAAATCTATTGTCATCCTTTGGAGTTGTTTTCCCCCTATCTACAATAATAATAGCATCATAAAAGGTTCTGAGTACTTGAGTTATACTCAATTTATTTGAGTTTAATTTCTTGTGTAATCTTTTATATCTTGATATCAGTGTGTGGGAAACTTTTTCTAACTTCTTTTTCATATGAAACATTGTG GGCTTATCTTTCTATGTGCATTCAACCACAGAAAATTCAAGAAGATGTTGGGTAAACTCCAGCACGAGGCAGTTATTGACGTCCCGGCCAACGTGACATGGCAGCTCTTCGGCAGCCTTGAACTTGGACGAATTGTGGGAGAACAACTTCCGAATCTTTTTGAGAAAATCGAATTAGTTGAAGGTGATGGAGGAGAAGGAACTGTTCTTAATCTCATTTTTGCTCCAGGTTTAGGTACCTCAAGTTATAAAGAGAAATTTACAAAAATAGATAATGAGAATCGTATAAAAGAGACAGAGATAGTGGAAGGAGGATTCTTGAACATTGGATTTACTCTCTATAGGGTTCGTTTCAAGATAATTGAGAATGGTGAAGATAAGTGTATTGTTGAAACGACAATTGAATATGAAATCATGGAAGAAGCTGCTGCAAATGCTTCACTTGTTACTCTACAACCTCTCATTGAGATTGTTCAACTTGCAAATAACTATCTCCTTCACAACAAAAACCCTAAATAGAGATGCATTAAATCATATGATGAAATCTATTGTCATCCTTTGGAGTTGTTTTCCCCCTATCTACAATAATAATAGCATCATAAAAGGTTCTGAGTACTTGAGTTATACTCAATTTATTTGAGTTTAATTTCTTGTGTAATCTTTTATATCTTGATATCAGTGTGTGGGAAACTTTTTCTAACTTCTTTTTCATATGAAACATTGTG ATGTTGGGTAAACTCCAGCACGAGGCAGTTATTGACGTCCCGGCCAACGTGACATGGCAGCTCTTCGGCAGCCTTGAACTTGGACGAATTGTGGGAGAACAACTTCCGAATCTTTTTGAGAAAATCGAATTAGTTGAAGGTGATGGAGGAGAAGGAACTGTTCTTAATCTCATTTTTGCTCCAGGTTTAGGTACCTCAAGTTATAAAGAGAAATTTACAAAAATAGATAATGAGAATCGTATAAAAGAGACAGAGATAGTGGAAGGAGGATTCTTGAACATTGGATTTACTCTCTATAGGGTTCGTTTCAAGATAATTGAGAATGGTGAAGATAAGTGTATTGTTGAAACGACAATTGAATATGAAATCATGGAAGAAGCTGCTGCAAATGCTTCACTTGTTACTCTACAACCTCTCATTGAGATTGTTCAACTTGCAAATAACTATCTCCTTCACAACAAAAACCCTAAATAG MLGKLQHEAVIDVPANVTWQLFGSLELGRIVGEQLPNLFEKIELVEGDGGEGTVLNLIFAPGLGTSSYKEKFTKIDNENRIKETEIVEGGFLNIGFTLYRVRFKIIENGEDKCIVETTIEYEIMEEAAANASLVTLQPLIEIVQLANNYLLHNKNPK* Homology
BLAST of CSPI02G27800 vs. ExPASy Swiss-Prot
Match: A0A3G5BB24 (Norbelladine synthase OS=Narcissus pseudonarcissus OX=39639 GN=NBS PE=1 SV=1) HSP 1 Score: 140.6 bits (353), Expect = 1.5e-32 Identity = 66/156 (42.31%), Postives = 102/156 (65.38%), Query Frame = 0
BLAST of CSPI02G27800 vs. ExPASy Swiss-Prot
Match: Q4QTJ1 (S-norcoclaurine synthase 2 OS=Papaver somniferum OX=3469 GN=NCS2 PE=1 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 2.8e-26 Identity = 54/153 (35.29%), Postives = 100/153 (65.36%), Query Frame = 0
BLAST of CSPI02G27800 vs. ExPASy Swiss-Prot
Match: Q4QTJ2 (S-norcoclaurine synthase 1 OS=Papaver somniferum OX=3469 GN=NCS1 PE=1 SV=1) HSP 1 Score: 116.7 bits (291), Expect = 2.4e-25 Identity = 55/153 (35.95%), Postives = 97/153 (63.40%), Query Frame = 0
BLAST of CSPI02G27800 vs. ExPASy Swiss-Prot
Match: Q67A25 (S-norcoclaurine synthase OS=Thalictrum flavum subsp. glaucum OX=150095 PE=1 SV=1) HSP 1 Score: 107.8 bits (268), Expect = 1.1e-22 Identity = 50/152 (32.89%), Postives = 89/152 (58.55%), Query Frame = 0
BLAST of CSPI02G27800 vs. ExPASy Swiss-Prot
Match: A2A1A1 (S-norcoclaurine synthase 2 OS=Coptis japonica OX=3442 GN=PR10A PE=2 SV=2) HSP 1 Score: 100.5 bits (249), Expect = 1.8e-20 Identity = 53/143 (37.06%), Postives = 82/143 (57.34%), Query Frame = 0
BLAST of CSPI02G27800 vs. ExPASy TrEMBL
Match: A0A0A0LNC6 (Bet_v_1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G439140 PE=3 SV=1) HSP 1 Score: 313.5 bits (802), Expect = 4.9e-82 Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 0
BLAST of CSPI02G27800 vs. ExPASy TrEMBL
Match: A0A5A7THT1 (S-norcoclaurine synthase 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold75G00340 PE=3 SV=1) HSP 1 Score: 290.4 bits (742), Expect = 4.4e-75 Identity = 142/157 (90.45%), Postives = 150/157 (95.54%), Query Frame = 0
BLAST of CSPI02G27800 vs. ExPASy TrEMBL
Match: A0A1S3CA50 (S-norcoclaurine synthase 2-like OS=Cucumis melo OX=3656 GN=LOC103498383 PE=3 SV=1) HSP 1 Score: 290.0 bits (741), Expect = 5.8e-75 Identity = 141/157 (89.81%), Postives = 150/157 (95.54%), Query Frame = 0
BLAST of CSPI02G27800 vs. ExPASy TrEMBL
Match: A0A5A7TFG6 (S-norcoclaurine synthase 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold234G00780 PE=3 SV=1) HSP 1 Score: 280.0 bits (715), Expect = 6.0e-72 Identity = 137/157 (87.26%), Postives = 150/157 (95.54%), Query Frame = 0
BLAST of CSPI02G27800 vs. ExPASy TrEMBL
Match: A0A6J1J835 (S-norcoclaurine synthase 2-like OS=Cucurbita maxima OX=3661 GN=LOC111484311 PE=3 SV=1) HSP 1 Score: 242.3 bits (617), Expect = 1.4e-60 Identity = 121/158 (76.58%), Postives = 135/158 (85.44%), Query Frame = 0
BLAST of CSPI02G27800 vs. NCBI nr
Match: XP_004148085.1 (S-norcoclaurine synthase 2 [Cucumis sativus] >KGN63405.1 hypothetical protein Csa_021802 [Cucumis sativus]) HSP 1 Score: 313.5 bits (802), Expect = 1.0e-81 Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 0
BLAST of CSPI02G27800 vs. NCBI nr
Match: KAA0042962.1 (S-norcoclaurine synthase 2-like [Cucumis melo var. makuwa]) HSP 1 Score: 290.4 bits (742), Expect = 9.2e-75 Identity = 142/157 (90.45%), Postives = 150/157 (95.54%), Query Frame = 0
BLAST of CSPI02G27800 vs. NCBI nr
Match: XP_008459186.1 (PREDICTED: S-norcoclaurine synthase 2-like [Cucumis melo]) HSP 1 Score: 290.0 bits (741), Expect = 1.2e-74 Identity = 141/157 (89.81%), Postives = 150/157 (95.54%), Query Frame = 0
BLAST of CSPI02G27800 vs. NCBI nr
Match: KAA0041658.1 (S-norcoclaurine synthase 2-like [Cucumis melo var. makuwa] >TYJ97970.1 S-norcoclaurine synthase 2-like [Cucumis melo var. makuwa]) HSP 1 Score: 280.0 bits (715), Expect = 1.2e-71 Identity = 137/157 (87.26%), Postives = 150/157 (95.54%), Query Frame = 0
BLAST of CSPI02G27800 vs. NCBI nr
Match: XP_038901967.1 (norbelladine synthase-like [Benincasa hispida]) HSP 1 Score: 259.2 bits (661), Expect = 2.3e-65 Identity = 128/157 (81.53%), Postives = 140/157 (89.17%), Query Frame = 0
BLAST of CSPI02G27800 vs. TAIR 10
Match: AT5G45860.1 (PYR1-like 11 ) HSP 1 Score: 44.7 bits (104), Expect = 8.2e-05 Identity = 28/110 (25.45%), Postives = 48/110 (43.64%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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