CSPI02G27710 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI02G27710
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Aminoacyl-tRNA hydrolase
Location	Chr2: 23714551 .. 23724152 (-)
RNA-Seq Expression	CSPI02G27710
Synteny	CSPI02G27710

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGAAAGAGTTTTTTAAAATTTGAAAAGAAAGATTGATCCAAAAAAAGAAAGAGATTTCTCCACCCCCATCTCCTCTTTTTCCTTCATCTCCCATCTGTGTCGCAGCCGCAGATCGCCACCCACCCCATAAACCCAACGCTTCTCTCCCTCACTCCCTGCGGCAGCCACACCCACGCCTATTTCTCTCTTTCTTCTTCACCGTTGCCATTGCCGATTCTCAGCACGCCCCTGCACTCAGTTTCTCTCCCCTTCTCTTCTCTCACTCTCTACTGCGATCTCACGCCGAAATGCTACTATCTCGAGGTCTATCGTCCCCATCAAAGTTCTATTTTCCATTCTCTTTCTTTAGCTGCTCTCTGTTTCGACCAAATTTTGGAATCATTGCAATTTCTATTATTCCGACATTTTAGTCGGACAATGTTTGGATCAAAACAAGATTTCAAATCATTTTGATTACTAACTTCTATGTTTCTATTCATTCAAATCCCCATAAATGATTTGAAGTTCATTCTGATTTAAAATCGTAGTTCCAAACGGTGGTAAATGCAATTCAAAACGTTTTTAGCGTTTTCTGAAAAGCATAAGAAAAAGTTTTTTTTTTTTTTTTTTTTTTTTTGTGTTTTTCATAATCCTGAATTTGAGTAAAAATAGCTGCTATTTCATTCATTTTTATCTTTATCTTTGTTTCTTTCAATTGGTCTTTTAAAAAAAAATTTTTTTTTTTTTTTTTTTTTTTTGTGTTTTTCATAATCCTGAATTTGAGTAAAAATAGCTGCTATTTCATTCATTTTTATCTTTATCTTTGTTTCTTTCAATTGGTCTTTTCTCTTTGTATTTACTGTTTGCGAGTTTTAATTTTGAGCTTTTCATGTTCTATGTAGGAGTTCTATTGCTAGAATTAGAATTTGGTATCTGGTCCAGGATTATTCTTGCTGGACTTCAGTAGTGGAGAAGTGCATTTTATAGACTATAATTGGATGGATCTGGCATGGTTGAGTGCCATTGTAGTTGGGGCCGGCTGCCTTGTTTTGGGATACTATATTGGTTCAAAGTATCCTCCTCGGGTCTTTGTCAAAGCTAAATTAGCCAAAAGCAATGAATCAAGCAGAAATGGGAAGAAGAAGGATAAGACTAAAGAGCCACTGGAGGTCGAAAATTTGGCTGACATTCTGGATGACTTCAAGATGGTATGCTTCTGAGTGTCTCTGTCTATCTCTGTTTCTATCGTGCTATCTATTAGAAAATCATTCTCAATAACTTTAATGATCTTTTTTTCTAACAAATAGTAACAACTTTTAACCGTGTCTCTACAGGTTTTAGTTGTGAGAAATGATTTGAAAATGGGAAAAGGAAAAATCGCAGCCCAATGCAGGTATTTTATTAACACCTTTTTGTTGCTCTTTCATTACTTGCTATTTTAAATGCTAATTGCTAACAATGAAAGAAAATTTAAATTTTATTGCTGCTCGTGTAGTGTGAAAGCTGGAGTTGTTTTCGTTAGCATCGTCGTCCTTGTCCTCCCAAGAATTGGACATATGGAGTGCTTAGAAGTTTAGGTTAACAATCCACTGCTCACCTGATATAGTAGAATACTCACAATGACCATAATAAATTTAACAAAAGTTTATGAACGACTATAATAACATGAGACATTTAGGATGATGATAGGGTTCAAGTAAAAGTTATCACAATGCAGAATTTTGGAAGATAATAGTGCTACTATTCTTTTGAAATATTGCACTGTCAAAATTAAGAAAGTTGTTGATGAATGCAATCTACAAAACTGCAGCAAAAGAGCTAATGGAAAGAATTAGGAAAATCCCTGTAAATATAATTTCAGAAGATCAGCAAACTCGGACAAAATCTTGCATTTATATTGCAAATGAGACTAGAAAAGTGATAGAAAGTTTTTGGATAAAGTATGGGAAGTAATTTTTAAAGCAGTGTAGGTCAGAAAATGAGAAAGGTGAAGAAGAGAGTGCATTATCTAGGTGGCCACCTAATAGTGGGTTCAATCTAATAGTGGCCACTTACTTAAGAATTAATTTTCATGAGTTTCCTTGACACTCAAATGTTGTAGGGTTAGATGGGTTGTCCTGTGAGATTAGTTCGAGGTGTTCGTAAGCTGGTTTGGACACTAATGGATATATATAAAAAAAGATTAGTTTATTTTATAAGGAAGATTCTCTCATTCTTCATTATCTAGGTGTTCAGGTTTGGTGGATCTCTCAACTGCTTTCTCGTTATCTGTTTTGGAGATTTATTGTCTGGATTCTTTGCTTTGTTGGTGATAGTTAAATAATAGATAGAAGTCATAAGGAATATAGTATTAAGTTTTTTTCTTTTTCTTTTAATATGTAAATTATTGTTAAATGTTCAGATGAAGGGTACTATATTCTCAGATAGATTTCTTGTTCATTATCATGTAATCCTCTGTTTATGATAGAAACCGACAGTTCAAAAATTTTTAGGTGAAAATTATGGCACACAATCTATGGGCTTTTTGTTTGTATTGTTTCCTATCCTTTCATATTAAGTGTTAGGGACAACCAACCTCCAAATCTCTCCACCATGTTATGATGTTGTTCACCTTGGACGTATATTCTCTGACTTTGTTTTTGGTTTCACCTAAAAAATCCTCATTCTATTAGTGATAGTTGTCCTCCTTTATAAGTCCATGATCATCTCCTTATTTAACAGATGTTGAACTTTGATCGTATTTCCAGCATTAAGGTCTACAAATACCTTTCAATCGTCATGGTGGATTTTCATGAAACTCAATATTATGTGCATAACTGTTGGCCATGCATAAGTAGTGTAAGCTTAGGATTGCTTGTTCCTTCAAAACTACATTCAAACAATATGACAAAGTAAGGGGCAAATAAGAAAGACTATTGAAATCCCTATCCTTGTTGGCAAAAATATGATGATTCCTCTCATTCCAAATGGACTACAGAAAGGCCCTAATAAAGTAAATTACTTGGTTGTATGATAGAAAAAAAAAAAAAACGCACAAAAGTTCTTATCGAGATCAGCAACATGAAACTTTTGAAGAATACAAAATCCATATTCTAGTAATGCTCGGAAATATAGTTTTTAATATTACATAGTTTGGCTCATGCTATGAGTCAAAACCAAACATTTGTTCCGTCTGAAAAAACCCATATTACATTATTGCAATTATCAGCTAACTTTGTGGCTGATAGTAACTGAAAGAATTACCGATCCTACACAAATATTTTATGTTACTACTACTTGAGAGACCGAAATTTCATATAATTTTAGGTACCGCCTTATTACTTGTTTAATAGTTAAATTCTGAGAATTGATTCTAGTGATCCAAATTTCTAAAACCTTTGCATAGAATTCCCAGTTTCCCAGTTTCCCACTATTGTAAATTGGATTTGGAATCGTTCTTAATCTACTTTACTTGCTTTTATTAGTCATGCAACTTTGGGTCTCTATAAGAAGCTCCATTATCGTGCACCAAAAGCCTTGAACAGGTATGTATCAACAAAAATGTCCTCCCTATATTAATATTGGGGATATTTTGTATACTTCGTTCTATGTACAGTTGTTTGATTTTATTTACATGTAGGTGGGAGATGTGTGCGCAACCCAAGGTGGTTCTGAAGATAGAAAGTGAGGAAGACATGCTAGTTTTGCAAGTAACAATTCCACTCTGATATTTTTTTCTCCACTCTGACTTTATGCTATCTAGCTATTTTTTTTGTGTATGTCAAAATAATATCGCATCTGCATTTAGTTGATGTTTGCTAGTTTCCTATTCTGTTGTATGTTTGAATATATCTTTAAGCAATTGACCTGCCCTTTTTTCTTTTCCTTTGTTGAGAAATAAAATGAAAGAATACAAGTGCACAAAAAACCAAGTCTACAAAAAGCTTTTACTGAAGGAAGGGTTTCCAACTAGTTAAGATATTGCCTAGGAAATAATTACAAAAAGCTTTCAAAACCGAAGCCAAAAGAAAAAAGCATTAAACTTCATCAAAGACCAAATCTTGCGAGGGTGCCTCTCCACACCATTGAATGCTTTATTGTTCCTCTCCCCCCATAGACCAAGAAATCAACCTTTCTCTTTGAAAGGCGGATGGAGGAGGAAGTTCCCAATCATCAACTGAACATCCCTGTAACAAGCAGTCAAAAAACCAAACTCTTGCAAGAAACCGCCATTGACAGATCTTGCAAATGTACATTCCCAAAGAAGCTGATCTAGGTTATTTCTTGCTGAAACCAATTTTTTCTCCCAACCGACTATTTGTTTTATTTGACTGAACTAGTCGACTATTGTTCTTCAAAACAGCCGAACTATTAATCAAGACATCTGTTCCTTTTAGCAGCACCCTGGTATAACACCCTTCATTATTGTTAATATGGTGCAGCCTCTTTTCGTTTCAGTAATCTTATTTCTCTTACCAACTTTACCACAGTGCCAGAAAATTTCGTAGAGCATATTATACAATTGGTGATGGTCTTCTTAAATAATCTTTATTCCTTTTCTTCCCAGTTGATTTTGGATAATTTGCAACTTGCTCTTTTCTGTCTCATCTATTCTTTGAGGCCTTTGAGTAATTTCTTTCATTCTTTCTGAATTTTATTGTACATCAGGAGAGGGCAAAATCATTGAAGCTACCAACTCATATTACTATTGATGCCGGAAGAACTCAGATTGCACCCAGTAAGCTTATATGAAATTCACTTAAGTAGATCGATTTATTCATAGAAACTTTATCAATTTCACTGATTTTCACTTTATTGTTTTTTCAGATTCGAGAACGGTGATGGCAATTCTTGGTAAGTAGATTTTTCCGTGCAACTTTTAAAAATTAAAGAGTTCATTGCTGCCATGGGCATTTAATTTAAGCATTCCTTTTGTAGCAAAATTCCTCAAATGGGAAGAATGCTCACTCTAACGTATTTTGAGATAAAATGTTGACTTCGACTACTTTTAAGACCTTGCCATGGGTTTCTATCTCTGTTCTACTAACTTGGCAAATTTCCTACATTTTTCACTCTTTTGTTCAACTCGATTTTTGGTTAGCTAGCTCAACTGGTCGATCTATGTATCAATTTCATATGGTGTGGTGCTAAATAAAATTATTACAAACTAGTTGAAAGATAAGTTATACAAACTTTTCTCTCAAAATGTGATTGTTTTGAGATGGAAAAATTCACGATAGGTAGAAAGGAGTTTAGGGTCGGAACTGTAGGGATTGATAGGAAGATTTATATTGAGGAAAGGAATGGAGACAATTTGGTAAGCTGGAGTTGGATCGGGGAACTGCAGCTTGGGTAAGGGACTATTTGAAGGCAGCCGTGGATGCCAGTTGGTCCACTGGTTTTTAGCAAAGAAGAAGTTTGGTCTTTGCCATTCTCTTTTTTCAGATGCTGGAGAACAGTATAGGAAGATTTGCTATTCTATCCCTTGAATCTTTTAAAGGAAGGAAAATAAGGATATTCATCCTGGAAGGAAGTAGAGGTAGTGATTAGTACTCATTAGCACAGAAATCTCGGTGTATCTTTCAGGCTCAAATATAGGTTCTCAGAAGTCTAGTAATGAAATCCAAAAATCAAAGGACTCATCTTGGAAAGAAAAAGATGGCTCCCAGGTGCCAGTTGCCAATGTGTAGATTAACAAAATGAATGGAGGGCAACCATACACAAAAAACTTGGAGAGAGATGCGCAAGAGGTCAAAGTGGTAACAGGGGAAAGAGATAAGATGGACTTTGCATTTGAATGCCAGACTATGATTACTATCAAGAAATTCAAGGCCTTGACAGATTGGGGAGTCTTGAAGCAACTTTTTGAAATGCCCCATATATTTGTTGTGGCTTCAAGATCTTTTGGGCAAATTTGGCAGTGGGGTTTTGCAACTCAGGTTCAGAGGTGAAGGAACTGATATGGATTGGGACGTTGTTTCAAAGCCAAGATTTTACGTTTCGACAGTGGAATTTTCGTGTGATTGAAGAGAAGAGAAAGTAGGTATTCAGGGGAGGGTGGGTCATGGCGCTGGACGTCCCTCCTTTCTTGAGAACTAAGGAGTTCTTGATTCCCTTGCATCCTAGTGTGGTGGCCTTGCCAATAAGGAAGTGTATTTGCTGGCGTGCAACTGGCTTAAGGAAGTGAGTTTTAGGGAAAATGGCAAAGAAGATGGTTATATTCAGATGGGGTGCATTGTTAACCACCAAGAATTTTCCTTTCTGGTGAGATACAAAACTAGCGGTCGATTGGTCTTTTAGTCTGTCTTTGGGTTAGAAGAGGAAGGATAAGGGAAGTCACGGGAACTGTTTGTATTCCACGAAGTGTGATGAGCCGGGGGAGAAAAAAGCCCACAGTGGGCTTGAGAATTGTAAGGTTAAGCCTATGGAATATGCTGGAAGGTGGGAAGGGTGTGATGTGTGATGGGCCGGTGGAAATGAGGTTGGGCCGGGATGAAGAGGACAATATTTCTTTGTGCCAGCTTAAGAACTCTGTGCTGTGCAAAGGAAATAACATTAAAAGTGGGCTGCCAAAATATATATGTGAGGTCCAAGTGGATCGTATAGATCTTTTGTGTTTGGAAAATGGGGTCTGTACTAGAGATAGGGAGGAAATTGAGCGGGAAGTTTTTCTATAACCTCTATAGCCCTGTGGTGTTGGAGAAGCCATTTGGTCTTGACTGGAGCCCTATTTTCCCTAGGGAGGATGAGGAGTTAGTCGCTCCTTTTACGATTGAAGAGATCAGGAATGTTTTTCAGTTGTGATGGCAACAAGGCTCCTAGTGCTGAGGGGTTTTCTATAGCTTTCTTTCCGGAGAATTGGGATCATCAAAGGTGACTTGGAGGGAGTTCTTAAGGAATTTTTTGAAAGAGGTATCTTGAACAGATTGGTGGTCGAAAGCTTTGTTTGTTTGATTCCTAAAAAGGATAATGCAAATAGGGTGAAAGGAGTTTCTACCTATCAACCTCATTACTAGTATTTATAAGATTTTGGCCAAGGCTTTTACCAATTGTTTAAGGAAAGTGCTGCCATTGACAAATTCTGAAACATAGGGAGCCTTTTTTTCTGGAAGACAGATTCTAGACCAAGCCTTTATTGCTAATGAAGCTATTGAGGAGTATAGGTCAAAGAATTTGGAGGGTGTTATGTTAAAGCTTGACTTTGAGAAAGCGTTCGACCATGTGGACTCAGACTTTTGGGACTTTCTGGATAGAGTAATGATGAAGAAAGACTTTGGGTATAAATGGAGAATGTGGATGTGGGGGTGTGTTAGAAATGTTTATTATATTCTCATCAGTGGAGTACCAAAAGGGGCGATTCAAGCTTCCAGGGGTCTTAGACATGGTGATCTTGTCTCTGTTTTTGTTCTTACTGGTTGTGGAAGTCGGTTGATAAGTAAAGGTGTTGATGGTAACATTATTGAGTTTTTTAAGATTGGTAGAGATGAAGTGGCCTTATCACACCTTCAGTTTGCTGATGATATGGTCGAATTCTTTCCACACCCTCAATCATATAGTCGAATTCTTTGAAGAGATGTCGGGCCTGGAAATCAATAGAAACAAGTGCACTATCTATGGTATTAATTCTGATTAGGTTAAGTTGCTAAGATGGGTGGAAGCGTTTGATTCTGAGATTGACTCTTTCCCTTCTTGCTACCTTGGTCTCTCGTTGGGGGTTAAGACAAGAGCTGTGTCTTTTTGGAATCCTGTTTGTGAGAAAATTCATAAGAGATTGGCGACATGGAAGAAAGGATCTTTTTCTAAAGTTGGTAGACTTACTTTGATTAAATCGATGTTGAGTGGAATTCTGGTGTATTATCTTTCTTTGTTTAGGGCCTCTAGTATGGTGTCAAGTGTCATGTGTGTAAGAGTATTGAAAAGTACATGAGAGACTTTCTGTGGGAGTGGGTGGACGAGGGTCACAACTCCCATTTGGTTAGTTGGGAGGTGGTGCAGCGCTCTGTGAGTCAAGGGGGATTAGAGATTGGTAATCTTAGAATTCGTAACAGAGGTATGATGGCAAAGTGGCTTTGGCGCTTCCATCTTGAGCGTGGTTCTCTTTGGCATAAGATCATTTTGAGCAAGCATGGTTCCCATCCTTTTGAGTGGACTATGAGAGACGTCAAAGACACTCTTCAAAATCCTTGGAACGATATTTCGTTCGAGCTTCCTACTTTTTATCGGTTTGTTTCTTGTTTTGTGGGGGATGGTAAGGACATTTTTCTGGGAGGATGAGATGGGTAGGTGAGAATTCCCTTTGTACTGTTTTTTCACATCGGTATATCTTTCCTCGTTCAAAAACTGTTCTATCTTGAATGTTTTGGTGAGATCTGAGAATTCTGTCTTTCTCTTTTGGGTTTCGTCGTAACTTGACCAATAGAGAAATGACAGAGGTGACCTCTCTTCTTTCCTTACTCGAGGGGTGCACTGTTTGAGAGGGGAGGAAAGATGCTTGTGTTTTGAATCCTAATTCTATTTGGGGTTTTGCCTGTAAATCATTGTTTTTTTGTTGTTGGATCCTACTCTCCTAAGGAGTCGGTCTTTGATATGGTGTGGTGGACTAAGGTTCCTAAGAAAGTTATGTTTTTTATCTTGCAAGTCTTGCTTGGTTGGGTTAACAGTGTTGATAGGCTTCTTGTTAGGAGGACTTCACTTGTCGGGCCTTTCTGTTATATGCTGTGTTGGATGGCAGAGTAAGATCTAAATCACCTTTCTTGAGATTGCCAATTTGCAAGAGCCATGTGGTGCTTCTTTCTTCAGGTGTTGGGTGTTAGCTTTGTCGATTTGAGGTGTGTTAGAATGACGATCGAAGAATTCCTTCTCCATCCACCCTTCACTGATAAGGGAGGCTTTTTATGGCATGCTGAGGTGTACACGGTTATTTGGGATATTTGGGGTGAGGAATGCTAGGGTGGTTTAGGAGGTAGAGGGAGGGGGTGGCATTTGGTCTTTGGTTAGATTTCACGTCTCTTTGGACTTCGGTTTTGAAGAACTTTTGTAACTATCCTATAGGCAACATTTTTCTTAGTTGGAACCCCCTTCCTTTAAAAGAGGGGTTTTGTGGGCTGGTTTTTTTTGTATCTCCTTGTACAAATTCTTTTTCATTCTTTCTCCATGAAACTTGTTTTCATAAGGGAAATAGAAAAATAAAAAATAAAATAAAATTATTATGAACTAATTTGGTTCGTATGAATATAATAGTATACATTTCTTACTTCCCAAATTGCAGGTCCTGTTGAAGTGGTTGATGATGTAACTGGTGGGTTGAAACTTTTGTAGTTTCTAATTCATGCCTGTTATCTCTCTAAATCTCTTGAAGACTTCAGTTCTCAGAAGACTCTACTCTGCAAAATCCATCCATGCTTGGACCAACTACACGGTATGAAACCGATCTATGTGGAGCTGAGCTATTGACACTCTACTATTTCCAATTTCTGATAACGATAATGTTAACAACGATAATCTAAGTTGACCTATTTATTATGAAATTTAGTATGATTTGAACAGTTGGAAAGTTGGATTACCTTGTTTGCGTAGGTTCAAACCTATTTAAAGATTTTGTTTCACGAACTGTTCTCTATTAATGTGTTTCTTTTAATTTATG

mRNA sequence

TTGAAAGAGTTTTTTAAAATTTGAAAAGAAAGATTGATCCAAAAAAAGAAAGAGATTTCTCCACCCCCATCTCCTCTTTTTCCTTCATCTCCCATCTGTGTCGCAGCCGCAGATCGCCACCCACCCCATAAACCCAACGCTTCTCTCCCTCACTCCCTGCGGCAGCCACACCCACGCCTATTTCTCTCTTTCTTCTTCACCGTTGCCATTGCCGATTCTCAGCACGCCCCTGCACTCAGTTTCTCTCCCCTTCTCTTCTCTCACTCTCTACTGCGATCTCACGCCGAAATGCTACTATCTCGAGGAGTTCTATTGCTAGAATTAGAATTTGGTATCTGGTCCAGGATTATTCTTGCTGGACTTCAGTAGTGGAGAAGTGCATTTTATAGACTATAATTGGATGGATCTGGCATGGTTGAGTGCCATTGTAGTTGGGGCCGGCTGCCTTGTTTTGGGATACTATATTGGTTCAAAGTATCCTCCTCGGGTCTTTGTCAAAGCTAAATTAGCCAAAAGCAATGAATCAAGCAGAAATGGGAAGAAGAAGGATAAGACTAAAGAGCCACTGGAGGTCGAAAATTTGGCTGACATTCTGGATGACTTCAAGATGGTTTTAGTTGTGAGAAATGATTTGAAAATGGGAAAAGGAAAAATCGCAGCCCAATGCAGTCATGCAACTTTGGGTCTCTATAAGAAGCTCCATTATCGTGCACCAAAAGCCTTGAACAGGTGGGAGATGTGTGCGCAACCCAAGGTGGTTCTGAAGATAGAAAGTGAGGAAGACATGCTAGTTTTGCAAGAGAGGGCAAAATCATTGAAGCTACCAACTCATATTACTATTGATGCCGGAAGAACTCAGATTGCACCCAATTCGAGAACGGTGATGGCAATTCTTGGTCCTGTTGAAGTGGTTGATGATGTAACTGGTGGGTTGAAACTTTTGTAGTTTCTAATTCATGCCTGTTATCTCTCTAAATCTCTTGAAGACTTCAGTTCTCAGAAGACTCTACTCTGCAAAATCCATCCATGCTTGGACCAACTACACGGTATGAAACCGATCTATGTGGAGCTGAGCTATTGACACTCTACTATTTCCAATTTCTGATAACGATAATGTTAACAACGATAATCTAAGTTGACCTATTTATTATGAAATTTAGTATGATTTGAACAGTTGGAAAGTTGGATTACCTTGTTTGCGTAGGTTCAAACCTATTTAAAGATTTTGTTTCACGAACTGTTCTCTATTAATGTGTTTCTTTTAATTTATG

Coding sequence (CDS)

ATGGATCTGGCATGGTTGAGTGCCATTGTAGTTGGGGCCGGCTGCCTTGTTTTGGGATACTATATTGGTTCAAAGTATCCTCCTCGGGTCTTTGTCAAAGCTAAATTAGCCAAAAGCAATGAATCAAGCAGAAATGGGAAGAAGAAGGATAAGACTAAAGAGCCACTGGAGGTCGAAAATTTGGCTGACATTCTGGATGACTTCAAGATGGTTTTAGTTGTGAGAAATGATTTGAAAATGGGAAAAGGAAAAATCGCAGCCCAATGCAGTCATGCAACTTTGGGTCTCTATAAGAAGCTCCATTATCGTGCACCAAAAGCCTTGAACAGGTGGGAGATGTGTGCGCAACCCAAGGTGGTTCTGAAGATAGAAAGTGAGGAAGACATGCTAGTTTTGCAAGAGAGGGCAAAATCATTGAAGCTACCAACTCATATTACTATTGATGCCGGAAGAACTCAGATTGCACCCAATTCGAGAACGGTGATGGCAATTCTTGGTCCTGTTGAAGTGGTTGATGATGTAACTGGTGGGTTGAAACTTTTGTAG

Protein sequence

MDLAWLSAIVVGAGCLVLGYYIGSKYPPRVFVKAKLAKSNESSRNGKKKDKTKEPLEVENLADILDDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHYRAPKALNRWEMCAQPKVVLKIESEEDMLVLQERAKSLKLPTHITIDAGRTQIAPNSRTVMAILGPVEVVDDVTGGLKLL*

Homology

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BLAST of CSPI02G27710 vs. ExPASy Swiss-Prot
Match: Q9Y3E5 (Peptidyl-tRNA hydrolase 2, mitochondrial OS=Homo sapiens OX=9606 GN=PTRH2 PE=1 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 2.2e-30
Identity = 72/137 (52.55%), Postives = 92/137 (67.15%), Query Frame = 0


Query: 48  KKDKTKEPLEVENLADILDD---FKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHYRA 107
           K   +K   + E+ A IL D   +KM+LVVRNDLKMGKGK+AAQCSHA +  YK++  R 
Sbjct: 42  KSKTSKTHTDTESEASILGDSGEYKMILVVRNDLKMGKGKVAAQCSHAAVSAYKQIQRRN 101

Query: 108 PKALNRWEMCAQPKVVLKIESEEDMLVLQERAKSLKLPTHITIDAGRTQIAPNSRTVMAI 167
           P+ L +WE C QPKVV+K   EE ++ L   AK L L   +  DAGRTQIAP S+TV+ I
Sbjct: 102 PEMLKQWEYCGQPKVVVKAPDEETLIALLAHAKMLGLTVSLIQDAGRTQIAPGSQTVLGI 161

Query: 168 -LGPVEVVDDVTGGLKL 181
             GP +++D VTG LKL
Sbjct: 162 GPGPADLIDKVTGHLKL 178

[Close]

BLAST of CSPI02G27710 vs. ExPASy Swiss-Prot
Match: Q8R2Y8 (Peptidyl-tRNA hydrolase 2, mitochondrial OS=Mus musculus OX=10090 GN=Ptrh2 PE=1 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.1e-29
Identity = 65/115 (56.52%), Postives = 83/115 (72.17%), Query Frame = 0


Query: 67  DFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHYRAPKALNRWEMCAQPKVVLKIESE 126
           ++KM+LVVR DLKMGKGK+AAQCSHA +  YK+   R+P+ L  WE C QPKVV+K   E
Sbjct: 66  EYKMILVVRTDLKMGKGKVAAQCSHAAVSAYKQTQRRSPQVLKEWEYCGQPKVVVKAPDE 125

Query: 127 EDMLVLQERAKSLKLPTHITIDAGRTQIAPNSRTVMAI-LGPVEVVDDVTGGLKL 181
           + ++ L   AK+L L   +  DAGRTQI P SRTV+ I  GPVE++D+VTG LKL
Sbjct: 126 DTLIQLLTHAKTLGLTVSLIQDAGRTQIEPGSRTVLGIGPGPVELIDEVTGHLKL 180

[Close]

BLAST of CSPI02G27710 vs. ExPASy Swiss-Prot
Match: Q3ZBL5 (Peptidyl-tRNA hydrolase 2, mitochondrial OS=Bos taurus OX=9913 GN=PTRH2 PE=2 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 1.4e-29
Identity = 70/128 (54.69%), Postives = 87/128 (67.97%), Query Frame = 0


Query: 57  EVENLADIL---DDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHYRAPKALNRWEM 116
           + E  A IL    ++KM+LVVRNDLKMGKGK+AAQCSHA +  YK++  R P+ L  WE 
Sbjct: 51  DTETEASILGESGEYKMILVVRNDLKMGKGKVAAQCSHAAVSAYKQIQRRNPELLKEWEY 110

Query: 117 CAQPKVVLKIESEEDMLVLQERAKSLKLPTHITIDAGRTQIAPNSRTVMAI-LGPVEVVD 176
           C QPKVV+K   EE ++ L   AK L L   +  DAGRTQIAP SRTV+ I  GP +++D
Sbjct: 111 CGQPKVVVKAPDEETLVELLTHAKVLGLTVSLIQDAGRTQIAPGSRTVLGIGPGPADLID 170

Query: 177 DVTGGLKL 181
            VTG LKL
Sbjct: 171 KVTGHLKL 178

[Close]

BLAST of CSPI02G27710 vs. ExPASy Swiss-Prot
Match: O97067 (Probable peptidyl-tRNA hydrolase 2 OS=Drosophila melanogaster OX=7227 GN=CG1307 PE=2 SV=2)

HSP 1 Score: 117.1 bits (292), Expect = 2.1e-25
Identity = 70/181 (38.67%), Postives = 106/181 (58.56%), Query Frame = 0


Query: 10  VVGAGCLVLGYYIGSKYPPR-------VFVKAKLAKSNESSRNGKKKDKTKEPLEVENLA 69
           ++    ++L +++G +Y  +       V   A    S ESS +   +    +    +   
Sbjct: 11  IINGLAVMLSFFVGYRYALKRGDAKDSVTEGAATPFSQESSVSSGSEASVSD----KGYG 70

Query: 70  DILDDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHYRAPKALNRWEMCAQPKVVLK 129
            + D+FKMVLVVRNDLKMGKGKIAAQC H  +G Y++   R P+ L  WE C   K+ ++
Sbjct: 71  GLNDNFKMVLVVRNDLKMGKGKIAAQCGHGAVGAYQRAVVRTPRLLRSWENCGCAKIAVR 130

Query: 130 IESEEDMLVLQERAKSLKLPTHITIDAGRTQIAPNSRTVMAILGPVEV--VDDVTGGLKL 182
           +ESE +++ +++ A+  +L T +  DAGRTQI  NS+TV+A+ GP     +D VTG LKL
Sbjct: 131 VESEAELMAIKKEAERQQLNTCLIRDAGRTQIEANSKTVLAV-GPAAAADIDRVTGHLKL 186

[Close]

BLAST of CSPI02G27710 vs. ExPASy Swiss-Prot
Match: O13830 (Probable peptidyl-tRNA hydrolase 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC19A8.14 PE=1 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 2.8e-22
Identity = 75/193 (38.86%), Postives = 104/193 (53.89%), Query Frame = 0


Query: 7   SAIVVGAGCLVLGYYIGSKYPPRVFVKAKLAKSNESSRNGKKKD--KTKEPLEVENLADI 66
           +A++VGA   V+G+ IG KY      +   +K+   + N +K+         + E+  ++
Sbjct: 15  AAVLVGA---VVGFMIGRKYSVADASRGYSSKNANKASNPEKESPVSVSNDEDSESETEL 74

Query: 67  LD----------------DFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHYRAPKAL 126
           LD                  KMVLVVR DL M KGKIAAQC+HA L  YK      P  +
Sbjct: 75  LDMLKGNSSLAALALAEGQTKMVLVVRTDLGMTKGKIAAQCAHAALACYKIASAVDPDLV 134

Query: 127 NRWEMCAQPKVVLKIESEEDMLVLQERAKSLKLPTHITIDAGRTQIAPNSRTVMAI-LGP 181
             WE   Q K+ L+ ++EE + +LQ +A SL L   +  DAGRTQIA  S TV+ I  GP
Sbjct: 135 RIWENAGQAKITLQAQTEETLELLQAQAMSLGLCARVIHDAGRTQIASGSATVLGIGPGP 194

[Close]

BLAST of CSPI02G27710 vs. ExPASy TrEMBL
Match: A0A5A7TI30 (Aminoacyl-tRNA hydrolase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold75G00570 PE=4 SV=1)

HSP 1 Score: 354.4 bits (908), Expect = 2.9e-94
Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 0


Query: 1   MDLAWLSAIVVGAGCLVLGYYIGSKYPPRVFVKAKLAKSNESSRNGKKKDKTKEPLEVEN 60
           MDLAWLSAIVVGAGCLVLGYYIGSKYPPRVFVKAKLAKSNESSRNGKKKDKTKEPLEVEN
Sbjct: 1   MDLAWLSAIVVGAGCLVLGYYIGSKYPPRVFVKAKLAKSNESSRNGKKKDKTKEPLEVEN 60

Query: 61  LADILDDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHYRAPKALNRWEMCAQPKVV 120
           LADILDDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHYRAPKALNRWEMCAQPKVV
Sbjct: 61  LADILDDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHYRAPKALNRWEMCAQPKVV 120

Query: 121 LKIESEEDMLVLQERAKSLKLPTHITIDAGRTQIAPNSRTVMAILGPVEVVDDVTGGLKL 180
           LKIESEEDMLVLQERAKSLKLPTHITIDAGRTQIAPNSRTVMAILGPVEVVDDVTGGLKL
Sbjct: 121 LKIESEEDMLVLQERAKSLKLPTHITIDAGRTQIAPNSRTVMAILGPVEVVDDVTGGLKL 180

Query: 181 L 182
           L
Sbjct: 181 L 181

[Close]

BLAST of CSPI02G27710 vs. ExPASy TrEMBL
Match: A0A0A0LTR6 (Aminoacyl-tRNA hydrolase OS=Cucumis sativus OX=3659 GN=Csa_2G437060 PE=4 SV=1)

HSP 1 Score: 354.4 bits (908), Expect = 2.9e-94
Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 0


Query: 1   MDLAWLSAIVVGAGCLVLGYYIGSKYPPRVFVKAKLAKSNESSRNGKKKDKTKEPLEVEN 60
           MDLAWLSAIVVGAGCLVLGYYIGSKYPPRVFVKAKLAKSNESSRNGKKKDKTKEPLEVEN
Sbjct: 1   MDLAWLSAIVVGAGCLVLGYYIGSKYPPRVFVKAKLAKSNESSRNGKKKDKTKEPLEVEN 60

Query: 61  LADILDDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHYRAPKALNRWEMCAQPKVV 120
           LADILDDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHYRAPKALNRWEMCAQPKVV
Sbjct: 61  LADILDDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHYRAPKALNRWEMCAQPKVV 120

Query: 121 LKIESEEDMLVLQERAKSLKLPTHITIDAGRTQIAPNSRTVMAILGPVEVVDDVTGGLKL 180
           LKIESEEDMLVLQERAKSLKLPTHITIDAGRTQIAPNSRTVMAILGPVEVVDDVTGGLKL
Sbjct: 121 LKIESEEDMLVLQERAKSLKLPTHITIDAGRTQIAPNSRTVMAILGPVEVVDDVTGGLKL 180

Query: 181 L 182
           L
Sbjct: 181 L 181

[Close]

BLAST of CSPI02G27710 vs. ExPASy TrEMBL
Match: A0A1S3C945 (Aminoacyl-tRNA hydrolase OS=Cucumis melo OX=3656 GN=LOC103498393 PE=4 SV=1)

HSP 1 Score: 354.4 bits (908), Expect = 2.9e-94
Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 0


Query: 1   MDLAWLSAIVVGAGCLVLGYYIGSKYPPRVFVKAKLAKSNESSRNGKKKDKTKEPLEVEN 60
           MDLAWLSAIVVGAGCLVLGYYIGSKYPPRVFVKAKLAKSNESSRNGKKKDKTKEPLEVEN
Sbjct: 1   MDLAWLSAIVVGAGCLVLGYYIGSKYPPRVFVKAKLAKSNESSRNGKKKDKTKEPLEVEN 60

Query: 61  LADILDDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHYRAPKALNRWEMCAQPKVV 120
           LADILDDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHYRAPKALNRWEMCAQPKVV
Sbjct: 61  LADILDDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHYRAPKALNRWEMCAQPKVV 120

Query: 121 LKIESEEDMLVLQERAKSLKLPTHITIDAGRTQIAPNSRTVMAILGPVEVVDDVTGGLKL 180
           LKIESEEDMLVLQERAKSLKLPTHITIDAGRTQIAPNSRTVMAILGPVEVVDDVTGGLKL
Sbjct: 121 LKIESEEDMLVLQERAKSLKLPTHITIDAGRTQIAPNSRTVMAILGPVEVVDDVTGGLKL 180

Query: 181 L 182
           L
Sbjct: 181 L 181

[Close]

BLAST of CSPI02G27710 vs. ExPASy TrEMBL
Match: A0A6J1G686 (Aminoacyl-tRNA hydrolase OS=Cucurbita moschata OX=3662 GN=LOC111451148 PE=4 SV=1)

HSP 1 Score: 333.6 bits (854), Expect = 5.3e-88
Identity = 172/181 (95.03%), Postives = 175/181 (96.69%), Query Frame = 0


Query: 1   MDLAWLSAIVVGAGCLVLGYYIGSKYPPRVFVKAKLAKSNESSRNGKKKDKTKEPLEVEN 60
           MDL WLSAIVVGAGCLVLGY IGSKYPPR+F+KAKLAKSNESSR G KK K KEPLEVEN
Sbjct: 1   MDLTWLSAIVVGAGCLVLGYCIGSKYPPRIFIKAKLAKSNESSRTG-KKGKPKEPLEVEN 60

Query: 61  LADILDDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHYRAPKALNRWEMCAQPKVV 120
           LADIL+DFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHYRAPKALNRWEMCAQPKVV
Sbjct: 61  LADILEDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHYRAPKALNRWEMCAQPKVV 120

Query: 121 LKIESEEDMLVLQERAKSLKLPTHITIDAGRTQIAPNSRTVMAILGPVEVVDDVTGGLKL 180
           LKIESEEDMLVLQERAKSLKLPTHITIDAGRTQIAPNSRTVMAILGPVEVVDDVTGGLKL
Sbjct: 121 LKIESEEDMLVLQERAKSLKLPTHITIDAGRTQIAPNSRTVMAILGPVEVVDDVTGGLKL 180

Query: 181 L 182
           L
Sbjct: 181 L 180

[Close]

BLAST of CSPI02G27710 vs. ExPASy TrEMBL
Match: A0A6J1D5N0 (Aminoacyl-tRNA hydrolase OS=Momordica charantia OX=3673 GN=LOC111017259 PE=4 SV=1)

HSP 1 Score: 332.4 bits (851), Expect = 1.2e-87
Identity = 170/181 (93.92%), Postives = 176/181 (97.24%), Query Frame = 0


Query: 1   MDLAWLSAIVVGAGCLVLGYYIGSKYPPRVFVKAKLAKSNESSRNGKKKDKTKEPLEVEN 60
           MDL WLSAIVVGAGCLVLGYYIGSKYPPR+F KAKLAKSNESSR+G KKDK KE LE+E+
Sbjct: 1   MDLTWLSAIVVGAGCLVLGYYIGSKYPPRIFFKAKLAKSNESSRSG-KKDKPKEALEIES 60

Query: 61  LADILDDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHYRAPKALNRWEMCAQPKVV 120
           LADILDDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLH+RAPKALNRWEMCAQPKVV
Sbjct: 61  LADILDDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHHRAPKALNRWEMCAQPKVV 120

Query: 121 LKIESEEDMLVLQERAKSLKLPTHITIDAGRTQIAPNSRTVMAILGPVEVVDDVTGGLKL 180
           LKIESEEDMLVLQERAKSLKLPTHITIDAGRTQIAPNSRTVMA+LGPVEVVDDVTGGLKL
Sbjct: 121 LKIESEEDMLVLQERAKSLKLPTHITIDAGRTQIAPNSRTVMAVLGPVEVVDDVTGGLKL 180

Query: 181 L 182
           L
Sbjct: 181 L 180

[Close]

BLAST of CSPI02G27710 vs. NCBI nr
Match: XP_004148093.1 (peptidyl-tRNA hydrolase 2, mitochondrial [Cucumis sativus] >XP_008459200.1 PREDICTED: peptidyl-tRNA hydrolase 2, mitochondrial-like [Cucumis melo] >KAA0042983.1 peptidyl-tRNA hydrolase 2 [Cucumis melo var. makuwa] >KGN63396.1 hypothetical protein Csa_022142 [Cucumis sativus])

HSP 1 Score: 354.4 bits (908), Expect = 6.0e-94
Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 0


Query: 1   MDLAWLSAIVVGAGCLVLGYYIGSKYPPRVFVKAKLAKSNESSRNGKKKDKTKEPLEVEN 60
           MDLAWLSAIVVGAGCLVLGYYIGSKYPPRVFVKAKLAKSNESSRNGKKKDKTKEPLEVEN
Sbjct: 1   MDLAWLSAIVVGAGCLVLGYYIGSKYPPRVFVKAKLAKSNESSRNGKKKDKTKEPLEVEN 60

Query: 61  LADILDDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHYRAPKALNRWEMCAQPKVV 120
           LADILDDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHYRAPKALNRWEMCAQPKVV
Sbjct: 61  LADILDDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHYRAPKALNRWEMCAQPKVV 120

Query: 121 LKIESEEDMLVLQERAKSLKLPTHITIDAGRTQIAPNSRTVMAILGPVEVVDDVTGGLKL 180
           LKIESEEDMLVLQERAKSLKLPTHITIDAGRTQIAPNSRTVMAILGPVEVVDDVTGGLKL
Sbjct: 121 LKIESEEDMLVLQERAKSLKLPTHITIDAGRTQIAPNSRTVMAILGPVEVVDDVTGGLKL 180

Query: 181 L 182
           L
Sbjct: 181 L 181

[Close]

BLAST of CSPI02G27710 vs. NCBI nr
Match: XP_038901927.1 (peptidyl-tRNA hydrolase 2, mitochondrial-like [Benincasa hispida])

HSP 1 Score: 349.0 bits (894), Expect = 2.5e-92
Identity = 177/181 (97.79%), Postives = 179/181 (98.90%), Query Frame = 0


Query: 1   MDLAWLSAIVVGAGCLVLGYYIGSKYPPRVFVKAKLAKSNESSRNGKKKDKTKEPLEVEN 60
           MDLAWLSAIVVGAGCLVLGYYIGSKYPPR+FV+AKLAKSNES RNGKKKDK KEPLEVEN
Sbjct: 1   MDLAWLSAIVVGAGCLVLGYYIGSKYPPRIFVRAKLAKSNESGRNGKKKDKPKEPLEVEN 60

Query: 61  LADILDDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHYRAPKALNRWEMCAQPKVV 120
           LADILDDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHYRAPKALNRWEMCAQPKVV
Sbjct: 61  LADILDDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHYRAPKALNRWEMCAQPKVV 120

Query: 121 LKIESEEDMLVLQERAKSLKLPTHITIDAGRTQIAPNSRTVMAILGPVEVVDDVTGGLKL 180
           LKIESEEDMLVLQERAKSLKLPTHITIDAGRTQIAPNSRTVMAILGPVEVVDDVTGGLKL
Sbjct: 121 LKIESEEDMLVLQERAKSLKLPTHITIDAGRTQIAPNSRTVMAILGPVEVVDDVTGGLKL 180

Query: 181 L 182
           L
Sbjct: 181 L 181

[Close]

BLAST of CSPI02G27710 vs. NCBI nr
Match: XP_023533748.1 (peptidyl-tRNA hydrolase 2, mitochondrial-like [Cucurbita pepo subsp. pepo] >XP_023533749.1 peptidyl-tRNA hydrolase 2, mitochondrial-like [Cucurbita pepo subsp. pepo] >XP_023533750.1 peptidyl-tRNA hydrolase 2, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 334.3 bits (856), Expect = 6.4e-88
Identity = 172/181 (95.03%), Postives = 176/181 (97.24%), Query Frame = 0


Query: 1   MDLAWLSAIVVGAGCLVLGYYIGSKYPPRVFVKAKLAKSNESSRNGKKKDKTKEPLEVEN 60
           MDL WLSAIVVGAGCLVLGY IGSKYPPR+F+KAKLAKSNESSR+G KK K KEPLEVEN
Sbjct: 1   MDLTWLSAIVVGAGCLVLGYCIGSKYPPRIFIKAKLAKSNESSRSG-KKGKAKEPLEVEN 60

Query: 61  LADILDDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHYRAPKALNRWEMCAQPKVV 120
           LADIL+DFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHYRAPKALNRWEMCAQPKVV
Sbjct: 61  LADILEDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHYRAPKALNRWEMCAQPKVV 120

Query: 121 LKIESEEDMLVLQERAKSLKLPTHITIDAGRTQIAPNSRTVMAILGPVEVVDDVTGGLKL 180
           LKIESEEDMLVLQERAKSLKLPTHITIDAGRTQIAPNSRTVMAILGPVEVVDDVTGGLKL
Sbjct: 121 LKIESEEDMLVLQERAKSLKLPTHITIDAGRTQIAPNSRTVMAILGPVEVVDDVTGGLKL 180

Query: 181 L 182
           L
Sbjct: 181 L 180

[Close]

BLAST of CSPI02G27710 vs. NCBI nr
Match: KAG7035146.1 (Peptidyl-tRNA hydrolase 2, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 334.0 bits (855), Expect = 8.3e-88
Identity = 172/181 (95.03%), Postives = 176/181 (97.24%), Query Frame = 0


Query: 1   MDLAWLSAIVVGAGCLVLGYYIGSKYPPRVFVKAKLAKSNESSRNGKKKDKTKEPLEVEN 60
           MDL WLSAIVVGAGCLVLGY IGSKYPPR+F+KAKLAKSNESSR+G KK K KEPLEVEN
Sbjct: 1   MDLTWLSAIVVGAGCLVLGYCIGSKYPPRIFIKAKLAKSNESSRSG-KKGKPKEPLEVEN 60

Query: 61  LADILDDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHYRAPKALNRWEMCAQPKVV 120
           LADIL+DFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHYRAPKALNRWEMCAQPKVV
Sbjct: 61  LADILEDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHYRAPKALNRWEMCAQPKVV 120

Query: 121 LKIESEEDMLVLQERAKSLKLPTHITIDAGRTQIAPNSRTVMAILGPVEVVDDVTGGLKL 180
           LKIESEEDMLVLQERAKSLKLPTHITIDAGRTQIAPNSRTVMAILGPVEVVDDVTGGLKL
Sbjct: 121 LKIESEEDMLVLQERAKSLKLPTHITIDAGRTQIAPNSRTVMAILGPVEVVDDVTGGLKL 180

Query: 181 L 182
           L
Sbjct: 181 L 180

[Close]

BLAST of CSPI02G27710 vs. NCBI nr
Match: XP_022947215.1 (peptidyl-tRNA hydrolase 2, mitochondrial-like [Cucurbita moschata] >XP_022947216.1 peptidyl-tRNA hydrolase 2, mitochondrial-like [Cucurbita moschata] >XP_022947217.1 peptidyl-tRNA hydrolase 2, mitochondrial-like [Cucurbita moschata])

HSP 1 Score: 333.6 bits (854), Expect = 1.1e-87
Identity = 172/181 (95.03%), Postives = 175/181 (96.69%), Query Frame = 0


Query: 1   MDLAWLSAIVVGAGCLVLGYYIGSKYPPRVFVKAKLAKSNESSRNGKKKDKTKEPLEVEN 60
           MDL WLSAIVVGAGCLVLGY IGSKYPPR+F+KAKLAKSNESSR G KK K KEPLEVEN
Sbjct: 1   MDLTWLSAIVVGAGCLVLGYCIGSKYPPRIFIKAKLAKSNESSRTG-KKGKPKEPLEVEN 60

Query: 61  LADILDDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHYRAPKALNRWEMCAQPKVV 120
           LADIL+DFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHYRAPKALNRWEMCAQPKVV
Sbjct: 61  LADILEDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHYRAPKALNRWEMCAQPKVV 120

Query: 121 LKIESEEDMLVLQERAKSLKLPTHITIDAGRTQIAPNSRTVMAILGPVEVVDDVTGGLKL 180
           LKIESEEDMLVLQERAKSLKLPTHITIDAGRTQIAPNSRTVMAILGPVEVVDDVTGGLKL
Sbjct: 121 LKIESEEDMLVLQERAKSLKLPTHITIDAGRTQIAPNSRTVMAILGPVEVVDDVTGGLKL 180

Query: 181 L 182
           L
Sbjct: 181 L 180

[Close]

BLAST of CSPI02G27710 vs. TAIR 10
Match: AT3G03010.1 (Peptidyl-tRNA hydrolase II (PTH2) family protein )

HSP 1 Score: 246.1 bits (627), Expect = 2.1e-65
Identity = 133/183 (72.68%), Postives = 155/183 (84.70%), Query Frame = 0


Query: 1   MDLAW-LSAIVVGAGCLVLGYYIGS-KYPPRVFVKAKLAKSNESSRNGKKKDKTKEPLEV 60
           MDL W LS ++VGA    LGYYI + +   R+F+ +K + + ++  +G KK K+KEPLE+
Sbjct: 1   MDLVWLLSVLLVGA---ALGYYISTLRQTRRIFLSSK-SVAIDAGSSGNKKTKSKEPLEI 60

Query: 61  ENLADILDDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHYRAPKALNRWEMCAQPK 120
           E LAD   +FKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKL  RAPKALNRWE CAQPK
Sbjct: 61  EKLADFRKNFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLLQRAPKALNRWEYCAQPK 120

Query: 121 VVLKIESEEDMLVLQERAKSLKLPTHITIDAGRTQIAPNSRTVMAILGPVEVVDDVTGGL 180
           VV+KIESEE+MLVLQERAK+LKLPTHITIDAG+TQIAPNSRTVMAILGPV+ VD+VTGGL
Sbjct: 121 VVVKIESEEEMLVLQERAKTLKLPTHITIDAGKTQIAPNSRTVMAILGPVDNVDEVTGGL 179

Query: 181 KLL 182
           KL+
Sbjct: 181 KLM 179

[Close]

BLAST of CSPI02G27710 vs. TAIR 10
Match: AT3G03010.2 (Peptidyl-tRNA hydrolase II (PTH2) family protein )

HSP 1 Score: 246.1 bits (627), Expect = 2.1e-65
Identity = 133/183 (72.68%), Postives = 155/183 (84.70%), Query Frame = 0


Query: 1   MDLAW-LSAIVVGAGCLVLGYYIGS-KYPPRVFVKAKLAKSNESSRNGKKKDKTKEPLEV 60
           MDL W LS ++VGA    LGYYI + +   R+F+ +K + + ++  +G KK K+KEPLE+
Sbjct: 1   MDLVWLLSVLLVGA---ALGYYISTLRQTRRIFLSSK-SVAIDAGSSGNKKTKSKEPLEI 60

Query: 61  ENLADILDDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHYRAPKALNRWEMCAQPK 120
           E LAD   +FKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKL  RAPKALNRWE CAQPK
Sbjct: 61  EKLADFRKNFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLLQRAPKALNRWEYCAQPK 120

Query: 121 VVLKIESEEDMLVLQERAKSLKLPTHITIDAGRTQIAPNSRTVMAILGPVEVVDDVTGGL 180
           VV+KIESEE+MLVLQERAK+LKLPTHITIDAG+TQIAPNSRTVMAILGPV+ VD+VTGGL
Sbjct: 121 VVVKIESEEEMLVLQERAKTLKLPTHITIDAGKTQIAPNSRTVMAILGPVDNVDEVTGGL 179

Query: 181 KLL 182
           KL+
Sbjct: 181 KLM 179

[Close]

BLAST of CSPI02G27710 vs. TAIR 10
Match: AT5G16870.1 (Peptidyl-tRNA hydrolase II (PTH2) family protein )

HSP 1 Score: 242.7 bits (618), Expect = 2.4e-64
Identity = 133/181 (73.48%), Postives = 144/181 (79.56%), Query Frame = 0


Query: 1   MDLAWLSAIVVGAGCLVLGYYIGSKYPPRVFVKAKLAKSNESSRNGKKKDKTKEPLEVEN 60
           MDL WLSA++VGA    LGY IG++    V          +SS         K PLE+E 
Sbjct: 1   MDLTWLSALIVGA---ALGYCIGTRRSKPVVAAVDKDIKTQSS---------KSPLEIEK 60

Query: 61  LADILDDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHYRAPKALNRWEMCAQPKVV 120
           LADILDDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKL  RAPKAL+ WE CAQPKVV
Sbjct: 61  LADILDDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLVRRAPKALDCWEECAQPKVV 120

Query: 121 LKIESEEDMLVLQERAKSLKLPTHITIDAGRTQIAPNSRTVMAILGPVEVVDDVTGGLKL 180
           +KIE E++ML LQERAKSLKLPTHITIDAGRTQIAPNSRTVMAILGPVEVVD+VTGGLKL
Sbjct: 121 VKIEDEDEMLELQERAKSLKLPTHITIDAGRTQIAPNSRTVMAILGPVEVVDEVTGGLKL 169

Query: 181 L 182
           L
Sbjct: 181 L 169

[Close]

BLAST of CSPI02G27710 vs. TAIR 10
Match: AT4G32900.2 (Peptidyl-tRNA hydrolase II (PTH2) family protein )

HSP 1 Score: 112.1 bits (279), Expect = 4.8e-25
Identity = 58/116 (50.00%), Postives = 80/116 (68.97%), Query Frame = 0


Query: 67  DFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHYRAPKALNRWEMCAQPKVVLKIESE 126
           + KMVLVVR DLKM  GKIA+QC+HA  G+Y +L       L RWE   QPK+V+  +++
Sbjct: 78  ELKMVLVVRQDLKMRTGKIASQCAHAATGMYAELMQSDRYLLRRWEENGQPKIVVTCKNQ 137

Query: 127 EDMLVLQERAKSLKLPTHITIDAGRTQIAPNSRTVMAI-LGPVEVVDDVTGGLKLL 182
           ++M  + E A+S+ LPT +  DAGRT++A  SRTV+A+  GP E+VD +TG L LL
Sbjct: 138 QEMNKITEAAESVGLPTFVVADAGRTEVAAGSRTVLAVGPGPKELVDSITGRLALL 193

[Close]

BLAST of CSPI02G27710 vs. TAIR 10
Match: AT4G32900.1 (Peptidyl-tRNA hydrolase II (PTH2) family protein )

HSP 1 Score: 66.2 bits (160), Expect = 3.0e-11
Identity = 31/63 (49.21%), Postives = 43/63 (68.25%), Query Frame = 0


Query: 67  DFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHYRAPKALNRWEMCAQPKVVLKIESE 126
           + KMVLVVR DLKM  GKIA+QC+HA  G+Y +L       L RWE   QPK+V+  +++
Sbjct: 78  ELKMVLVVRQDLKMRTGKIASQCAHAATGMYAELMQSDRYLLRRWEENGQPKIVVTCKNQ 137

Query: 127 EDM 130
           ++M
Sbjct: 138 QEM 140

The following BLAST results are available for this feature:

BLAST of CSPI02G27710 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9Y3E5	2.2e-30	52.55	Peptidyl-tRNA hydrolase 2, mitochondrial OS=Homo sapiens OX=9606 GN=PTRH2 PE=1 S...	[more]
Q8R2Y8	1.1e-29	56.52	Peptidyl-tRNA hydrolase 2, mitochondrial OS=Mus musculus OX=10090 GN=Ptrh2 PE=1 ...	[more]
Q3ZBL5	1.4e-29	54.69	Peptidyl-tRNA hydrolase 2, mitochondrial OS=Bos taurus OX=9913 GN=PTRH2 PE=2 SV=...	[more]
O97067	2.1e-25	38.67	Probable peptidyl-tRNA hydrolase 2 OS=Drosophila melanogaster OX=7227 GN=CG1307 ...	[more]
O13830	2.8e-22	38.86	Probable peptidyl-tRNA hydrolase 2 OS=Schizosaccharomyces pombe (strain 972 / AT...	[more]

BLAST of CSPI02G27710 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TI30	2.9e-94	100.00	Aminoacyl-tRNA hydrolase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol...	[more]
A0A0A0LTR6	2.9e-94	100.00	Aminoacyl-tRNA hydrolase OS=Cucumis sativus OX=3659 GN=Csa_2G437060 PE=4 SV=1	[more]
A0A1S3C945	2.9e-94	100.00	Aminoacyl-tRNA hydrolase OS=Cucumis melo OX=3656 GN=LOC103498393 PE=4 SV=1	[more]
A0A6J1G686	5.3e-88	95.03	Aminoacyl-tRNA hydrolase OS=Cucurbita moschata OX=3662 GN=LOC111451148 PE=4 SV=1	[more]
A0A6J1D5N0	1.2e-87	93.92	Aminoacyl-tRNA hydrolase OS=Momordica charantia OX=3673 GN=LOC111017259 PE=4 SV=...	[more]

BLAST of CSPI02G27710 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004148093.1	6.0e-94	100.00	peptidyl-tRNA hydrolase 2, mitochondrial [Cucumis sativus] >XP_008459200.1 PREDI...	[more]
XP_038901927.1	2.5e-92	97.79	peptidyl-tRNA hydrolase 2, mitochondrial-like [Benincasa hispida]	[more]
XP_023533748.1	6.4e-88	95.03	peptidyl-tRNA hydrolase 2, mitochondrial-like [Cucurbita pepo subsp. pepo] >XP_0...	[more]
KAG7035146.1	8.3e-88	95.03	Peptidyl-tRNA hydrolase 2, mitochondrial [Cucurbita argyrosperma subsp. argyrosp...	[more]
XP_022947215.1	1.1e-87	95.03	peptidyl-tRNA hydrolase 2, mitochondrial-like [Cucurbita moschata] >XP_022947216...	[more]

BLAST of CSPI02G27710 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G03010.1	2.1e-65	72.68	Peptidyl-tRNA hydrolase II (PTH2) family protein	[more]
AT3G03010.2	2.1e-65	72.68	Peptidyl-tRNA hydrolase II (PTH2) family protein	[more]
AT5G16870.1	2.4e-64	73.48	Peptidyl-tRNA hydrolase II (PTH2) family protein	[more]
AT4G32900.2	4.8e-25	50.00	Peptidyl-tRNA hydrolase II (PTH2) family protein	[more]
AT4G32900.1	3.0e-11	49.21	Peptidyl-tRNA hydrolase II (PTH2) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002833	Peptidyl-tRNA hydrolase, PTH2	PFAM	PF01981	PTH2	coord: 69..181 e-value: 2.9E-41 score: 140.5
IPR002833	Peptidyl-tRNA hydrolase, PTH2	TIGRFAM	TIGR00283	TIGR00283	coord: 69..181 e-value: 1.6E-33 score: 113.4
IPR002833	Peptidyl-tRNA hydrolase, PTH2	PANTHER	PTHR12649	PEPTIDYL-TRNA HYDROLASE 2	coord: 3..181
IPR002833	Peptidyl-tRNA hydrolase, PTH2	CDD	cd02430	PTH2	coord: 68..181 e-value: 2.07429E-62 score: 186.575
IPR023476	Peptidyl-tRNA hydrolase II domain superfamily	GENE3D	3.40.1490.10	Bit1	coord: 66..181 e-value: 2.1E-44 score: 152.3
IPR023476	Peptidyl-tRNA hydrolase II domain superfamily	SUPERFAMILY	102462	Peptidyl-tRNA hydrolase II	coord: 66..181
None	No IPR available	PANTHER	PTHR12649:SF19	OSJNBA0060D06.11 PROTEIN	coord: 3..181

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI02G27710.1	CSPI02G27710.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005829	cytosol
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0004045	aminoacyl-tRNA hydrolase activity