CSPI02G27400 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAATTGAGCTTGAAACCAGTGAAGAAAAGGTTTTGCCAAAAATCAGAATCATTCTCCGAACTCATATATCTTAAACTCATTGGTTGTGAGGATGATGACATAGTTTGTTTGCCATTGGAAATGAGTGAAGTATTGTACAATATTGAAGAATTTATAATCGAAGATGCTCGTAAGCTGATACAAGTGTTTGAAACTGAAGAATTAAGTAGAAGCAATAATAATGATGTTCAAAGATGTGCAAGGTTGAAGAAGTTGACATTATGGAATCTTCCAAAGCTTATGCATGTGTGGAAAGAAAGTAGCTTTGATAGTTTGGAAAACATTGACATACGGGGATGTGAGAATTTGAAGTGCATATTGGCATCCTCAGTCACATTCCTAAATTTGAAGTATCTGACGGTCGGAGAATGCAGTAAAATGATGAACTTGTTTAGCTCTACGGTGGCAGAAAATCTGGGAAATTTGGAGACTACTAAAATATATGATTGTAGAGAAATGAGATGTATAGTTGCAGCAGAAGAAGGAGAAGAAGAAAATGGTGAAATTGTTTTAAAAAACCTGAAACGTATCTTCTTACATGGCTTACCAAGACTAGCATGCTTTCACAATGGAAAATGTACGATTACGTTTCCATGGTTGGAGGGATTTTACATATATGGATTGTATGAAACGGAGACATTTTCACATGGAATACTAAGCTTCCCCAAATTGAAATCCATGAAGATAGATAAACGTGAATTTAAAATCGCGCCAGGGCAAGACATAAATGCTATTATCCATAAGAGGTACAGAATTATAATTATATAG ATGGAATTGAGCTTGAAACCAGTGAAGAAAAGGTTTTGCCAAAAATCAGAATCATTCTCCGAACTCATATATCTTAAACTCATTGGTTGTGAGGATGATGACATAGTTTGTTTGCCATTGGAAATGAGTGAAGTATTGTACAATATTGAAGAATTTATAATCGAAGATGCTCGTAAGCTGATACAAGTGTTTGAAACTGAAGAATTAAGTAGAAGCAATAATAATGATGTTCAAAGATGTGCAAGGTTGAAGAAGTTGACATTATGGAATCTTCCAAAGCTTATGCATGTGTGGAAAGAAAGTAGCTTTGATAGTTTGGAAAACATTGACATACGGGGATGTGAGAATTTGAAGTGCATATTGGCATCCTCAGTCACATTCCTAAATTTGAAGTATCTGACGGTCGGAGAATGCAGTAAAATGATGAACTTGTTTAGCTCTACGGTGGCAGAAAATCTGGGAAATTTGGAGACTACTAAAATATATGATTGTAGAGAAATGAGATGTATAGTTGCAGCAGAAGAAGGAGAAGAAGAAAATGGTGAAATTGTTTTAAAAAACCTGAAACGTATCTTCTTACATGGCTTACCAAGACTAGCATGCTTTCACAATGGAAAATGTACGATTACGTTTCCATGGTTGGAGGGATTTTACATATATGGATTGTATGAAACGGAGACATTTTCACATGGAATACTAAGCTTCCCCAAATTGAAATCCATGAAGATAGATAAACGTGAATTTAAAATCGCGCCAGGGCAAGACATAAATGCTATTATCCATAAGAGGTACAGAATTATAATTATATAG ATGGAATTGAGCTTGAAACCAGTGAAGAAAAGGTTTTGCCAAAAATCAGAATCATTCTCCGAACTCATATATCTTAAACTCATTGGTTGTGAGGATGATGACATAGTTTGTTTGCCATTGGAAATGAGTGAAGTATTGTACAATATTGAAGAATTTATAATCGAAGATGCTCGTAAGCTGATACAAGTGTTTGAAACTGAAGAATTAAGTAGAAGCAATAATAATGATGTTCAAAGATGTGCAAGGTTGAAGAAGTTGACATTATGGAATCTTCCAAAGCTTATGCATGTGTGGAAAGAAAGTAGCTTTGATAGTTTGGAAAACATTGACATACGGGGATGTGAGAATTTGAAGTGCATATTGGCATCCTCAGTCACATTCCTAAATTTGAAGTATCTGACGGTCGGAGAATGCAGTAAAATGATGAACTTGTTTAGCTCTACGGTGGCAGAAAATCTGGGAAATTTGGAGACTACTAAAATATATGATTGTAGAGAAATGAGATGTATAGTTGCAGCAGAAGAAGGAGAAGAAGAAAATGGTGAAATTGTTTTAAAAAACCTGAAACGTATCTTCTTACATGGCTTACCAAGACTAGCATGCTTTCACAATGGAAAATGTACGATTACGTTTCCATGGTTGGAGGGATTTTACATATATGGATTGTATGAAACGGAGACATTTTCACATGGAATACTAAGCTTCCCCAAATTGAAATCCATGAAGATAGATAAACGTGAATTTAAAATCGCGCCAGGGCAAGACATAAATGCTATTATCCATAAGAGGTACAGAATTATAATTATATAG MELSLKPVKKRFCQKSESFSELIYLKLIGCEDDDIVCLPLEMSEVLYNIEEFIIEDARKLIQVFETEELSRSNNNDVQRCARLKKLTLWNLPKLMHVWKESSFDSLENIDIRGCENLKCILASSVTFLNLKYLTVGECSKMMNLFSSTVAENLGNLETTKIYDCREMRCIVAAEEGEEENGEIVLKNLKRIFLHGLPRLACFHNGKCTITFPWLEGFYIYGLYETETFSHGILSFPKLKSMKIDKREFKIAPGQDINAIIHKRYRIIII* Homology
BLAST of CSPI02G27400 vs. ExPASy TrEMBL
Match: A0A0A0LQT7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G432270 PE=4 SV=1) HSP 1 Score: 204.5 bits (519), Expect = 5.5e-49 Identity = 105/116 (90.52%), Postives = 107/116 (92.24%), Query Frame = 0
BLAST of CSPI02G27400 vs. ExPASy TrEMBL
Match: A0A0A0K5R3 (NB-ARC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G239020 PE=4 SV=1) HSP 1 Score: 184.1 bits (466), Expect = 7.7e-43 Identity = 112/261 (42.91%), Postives = 152/261 (58.24%), Query Frame = 0
BLAST of CSPI02G27400 vs. ExPASy TrEMBL
Match: A0A0A0LNF6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G432260 PE=4 SV=1) HSP 1 Score: 168.7 bits (426), Expect = 3.3e-38 Identity = 82/100 (82.00%), Postives = 88/100 (88.00%), Query Frame = 0
BLAST of CSPI02G27400 vs. ExPASy TrEMBL
Match: A0A1S3CHN4 (disease resistance protein At4g27190-like OS=Cucumis melo OX=3656 GN=LOC103501064 PE=4 SV=1) HSP 1 Score: 154.8 bits (390), Expect = 5.0e-34 Identity = 83/175 (47.43%), Postives = 115/175 (65.71%), Query Frame = 0
BLAST of CSPI02G27400 vs. ExPASy TrEMBL
Match: A0A0A0LTN4 (NB-ARC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G433370 PE=4 SV=1) HSP 1 Score: 146.4 bits (368), Expect = 1.8e-31 Identity = 93/259 (35.91%), Postives = 148/259 (57.14%), Query Frame = 0
BLAST of CSPI02G27400 vs. NCBI nr
Match: KAE8652339.1 (hypothetical protein Csa_022544 [Cucumis sativus]) HSP 1 Score: 383.3 bits (983), Expect = 1.8e-102 Identity = 195/221 (88.24%), Postives = 202/221 (91.40%), Query Frame = 0
BLAST of CSPI02G27400 vs. NCBI nr
Match: XP_011659043.1 (probable disease resistance protein At4g27220 isoform X1 [Cucumis sativus]) HSP 1 Score: 362.1 bits (928), Expect = 4.2e-96 Identity = 189/271 (69.74%), Postives = 211/271 (77.86%), Query Frame = 0
BLAST of CSPI02G27400 vs. NCBI nr
Match: XP_031744707.1 (uncharacterized protein LOC101213664 isoform X3 [Cucumis sativus] >KAE8646109.1 hypothetical protein Csa_016362 [Cucumis sativus]) HSP 1 Score: 362.1 bits (928), Expect = 4.2e-96 Identity = 189/271 (69.74%), Postives = 211/271 (77.86%), Query Frame = 0
BLAST of CSPI02G27400 vs. NCBI nr
Match: XP_031744706.1 (probable disease resistance protein At4g27220 isoform X2 [Cucumis sativus]) HSP 1 Score: 362.1 bits (928), Expect = 4.2e-96 Identity = 189/271 (69.74%), Postives = 211/271 (77.86%), Query Frame = 0
BLAST of CSPI02G27400 vs. NCBI nr
Match: XP_038900321.1 (uncharacterized protein LOC120087577 [Benincasa hispida]) HSP 1 Score: 270.0 bits (689), Expect = 2.2e-68 Identity = 146/266 (54.89%), Postives = 187/266 (70.30%), Query Frame = 0
BLAST of CSPI02G27400 vs. TAIR 10
Match: AT5G46450.1 (Disease resistance protein (TIR-NBS-LRR class) family ) HSP 1 Score: 49.3 bits (116), Expect = 5.7e-06 Identity = 47/150 (31.33%), Postives = 70/150 (46.67%), Query Frame = 0
BLAST of CSPI02G27400 vs. TAIR 10
Match: AT1G69550.1 (disease resistance protein (TIR-NBS-LRR class) ) HSP 1 Score: 45.1 bits (105), Expect = 1.1e-04 Identity = 52/200 (26.00%), Postives = 88/200 (44.00%), Query Frame = 0
BLAST of CSPI02G27400 vs. TAIR 10
Match: AT5G38850.1 (Disease resistance protein (TIR-NBS-LRR class) ) HSP 1 Score: 43.1 bits (100), Expect = 4.1e-04 Identity = 33/95 (34.74%), Postives = 52/95 (54.74%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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