CSPI02G26520 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI02G26520
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr2: 22537455 .. 22538456 (-)
RNA-Seq ExpressionCSPI02G26520
SyntenyCSPI02G26520
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTCATTTCAATTTTCTTCAATAGTAACAACAATCCAATGGGGAATATCTGCTTTAAAAGCAACAAAGTTATGGCTCAAGACGACTCTTATGATGATTTTCCTCCTCATCACTTGATTGAACCTAAGAAAGTCCAGCAACAACCGCTTCCTGGATCCGCGATGGCCAAGCCAAAGAACGGAACCGGGGGTGCGGCTGGTAAGAAGGTAGTGAGGTTTAATTTACAAGAAGAAGAAAAAGACGAAGAGGAGAGAAATTCCGGGGACTCTGGACCCGGAGTGTTGAGGATTAAAGTGGTGATATCTCAGAAAGAGTTAAAACAGATATTGAAGAATAGAGAGAATAATTCGTGTTCATTGGAGGAATTGATTGAGGAGTTGAAGGTGAAAGGCAGAGCGACGACGGTTTCTGCAGATGAAACTGGAAGCTGGAAGCCGGCTTTGGAATGTATTCCAGAAGGTGAATCTACATTAATGAATTGAAAGTTCTCTTGATCTGATCATCTCTTTAGTCGTTTTTGTTAGTAAATCTGTGAAATATTAGTGTAATTATTGTCTTGGTGTGTTATTTAATCACCAAAACTGTTACTGAATATCTGTGTGCATGTGATTCTTAGAAGGTGGAGTTGTGTGTTTCTTGAATAACAATATATAGGTGATAATGTATACTTAAGTAATTTTTGTAACAATCGTAGCTACAATTTTGAGATTGGAATAACAACTTGATATATGTTTATGGTTTTTTCCACCTTCGTCCATTAAAATATTTGACTACTACTCATACTCCCAATCTCCAAATTGGTATCACCGACACATTTTTTAGTATAGGCCTACGGCTTCAGTCTCCTTTACCTTCTCAACCTTATGTTATTGAAATAATAAATAGCTTTGATAAAATTATCTTTCAAACACTCTTTAGACCCAACTTCAAGCCACACCCTTTATGCAACAAAATTTTTGGATCTTCCATTCATTGTTATTATATTCTCTTCTCTTCTCCACGT

mRNA sequence

ATTCATTTCAATTTTCTTCAATAGTAACAACAATCCAATGGGGAATATCTGCTTTAAAAGCAACAAAGTTATGGCTCAAGACGACTCTTATGATGATTTTCCTCCTCATCACTTGATTGAACCTAAGAAAGTCCAGCAACAACCGCTTCCTGGATCCGCGATGGCCAAGCCAAAGAACGGAACCGGGGGTGCGGCTGGTAAGAAGGTAGTGAGGTTTAATTTACAAGAAGAAGAAAAAGACGAAGAGGAGAGAAATTCCGGGGACTCTGGACCCGGAGTGTTGAGGATTAAAGTGGTGATATCTCAGAAAGAGTTAAAACAGATATTGAAGAATAGAGAGAATAATTCGTGTTCATTGGAGGAATTGATTGAGGAGTTGAAGGTGAAAGGCAGAGCGACGACGGTTTCTGCAGATGAAACTGGAAGCTGGAAGCCGGCTTTGGAATGTATTCCAGAAGGTGAATCTACATTAATGAATTGAAAGTTCTCTTGATCTGATCATCTCTTTAGTCGTTTTTGTTAGTAAATCTGTGAAATATTAGTGTAATTATTGTCTTGGTGTGTTATTTAATCACCAAAACTGTTACTGAATATCTGTGTGCATGTGATTCTTAGAAGGTGGAGTTGTGTGTTTCTTGAATAACAATATATAGGTGATAATGTATACTTAAGTAATTTTTGTAACAATCGTAGCTACAATTTTGAGATTGGAATAACAACTTGATATATGTTTATGGTTTTTTCCACCTTCGTCCATTAAAATATTTGACTACTACTCATACTCCCAATCTCCAAATTGGTATCACCGACACATTTTTTAGTATAGGCCTACGGCTTCAGTCTCCTTTACCTTCTCAACCTTATGTTATTGAAATAATAAATAGCTTTGATAAAATTATCTTTCAAACACTCTTTAGACCCAACTTCAAGCCACACCCTTTATGCAACAAAATTTTTGGATCTTCCATTCATTGTTATTATATTCTCTTCTCTTCTCCACGT

Coding sequence (CDS)

ATGGGGAATATCTGCTTTAAAAGCAACAAAGTTATGGCTCAAGACGACTCTTATGATGATTTTCCTCCTCATCACTTGATTGAACCTAAGAAAGTCCAGCAACAACCGCTTCCTGGATCCGCGATGGCCAAGCCAAAGAACGGAACCGGGGGTGCGGCTGGTAAGAAGGTAGTGAGGTTTAATTTACAAGAAGAAGAAAAAGACGAAGAGGAGAGAAATTCCGGGGACTCTGGACCCGGAGTGTTGAGGATTAAAGTGGTGATATCTCAGAAAGAGTTAAAACAGATATTGAAGAATAGAGAGAATAATTCGTGTTCATTGGAGGAATTGATTGAGGAGTTGAAGGTGAAAGGCAGAGCGACGACGGTTTCTGCAGATGAAACTGGAAGCTGGAAGCCGGCTTTGGAATGTATTCCAGAAGGTGAATCTACATTAATGAATTGA

Protein sequence

MGNICFKSNKVMAQDDSYDDFPPHHLIEPKKVQQQPLPGSAMAKPKNGTGGAAGKKVVRFNLQEEEKDEEERNSGDSGPGVLRIKVVISQKELKQILKNRENNSCSLEELIEELKVKGRATTVSADETGSWKPALECIPEGESTLMN*
Homology
BLAST of CSPI02G26520 vs. ExPASy TrEMBL
Match: A0A0A0LQE9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G418890 PE=4 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 8.4e-76
Identity = 145/147 (98.64%), Postives = 146/147 (99.32%), Query Frame = 0

Query: 1   MGNICFKSNKVMAQDDSYDDFPPHHLIEPKKVQQQPLPGSAMAKPKNGTGGAAGKKVVRF 60
           MGNICFKSNKVMAQDDSYDDFPPHHLIEPKKVQQQPLPGSAMAKPKNGTGGAAGKKVVRF
Sbjct: 1   MGNICFKSNKVMAQDDSYDDFPPHHLIEPKKVQQQPLPGSAMAKPKNGTGGAAGKKVVRF 60

Query: 61  NLQEEEKDEEERNSGDSGPGVLRIKVVISQKELKQILKNRENNSCSLEELIEELKVKGRA 120
           NLQEEEKDEE RNSGDSGPGVLRIKVVISQKELKQILK+RENNSCSLEELIEELKVKGRA
Sbjct: 61  NLQEEEKDEEGRNSGDSGPGVLRIKVVISQKELKQILKSRENNSCSLEELIEELKVKGRA 120

Query: 121 TTVSADETGSWKPALECIPEGESTLMN 148
           TTVSADETGSWKPALECIPEGESTLMN
Sbjct: 121 TTVSADETGSWKPALECIPEGESTLMN 147

BLAST of CSPI02G26520 vs. ExPASy TrEMBL
Match: A0A5D3DKZ8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold27G00200 PE=4 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 2.2e-60
Identity = 125/147 (85.03%), Postives = 135/147 (91.84%), Query Frame = 0

Query: 1   MGNICFKSNKVMAQDDSYDDFPPHHLIEPKKVQQQPL-PGSAMAKPKNGTGGAAGKKVVR 60
           MGNICF++NKVMAQDDSYD+ PP   IE +KV++QPL PGSAMAKPKNGTGGAAGKKVVR
Sbjct: 1   MGNICFRTNKVMAQDDSYDNLPPDQFIEAEKVEEQPLRPGSAMAKPKNGTGGAAGKKVVR 60

Query: 61  FNLQEEEKDEEERNSG-DSGPGVLRIKVVISQKELKQILKNRENNSCSLEELIEELKVKG 120
           FNLQEEE+D+E+RNSG DSG GVLRIKVVISQKELK+ILKNRENNSCSLEELIEELKVKG
Sbjct: 61  FNLQEEEEDQEDRNSGDDSGAGVLRIKVVISQKELKEILKNRENNSCSLEELIEELKVKG 120

Query: 121 RATTVSADETGSWKPALECIPEGESTL 146
           RATTVS DE GSWKPALECIPEGE  L
Sbjct: 121 RATTVS-DEIGSWKPALECIPEGEGDL 146

BLAST of CSPI02G26520 vs. ExPASy TrEMBL
Match: A0A6J1CG85 (uncharacterized protein LOC111011249 OS=Momordica charantia OX=3673 GN=LOC111011249 PE=4 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 1.2e-24
Identity = 76/148 (51.35%), Postives = 96/148 (64.86%), Query Frame = 0

Query: 1   MGNICFKSNKVMAQDDSYDDFPPHHLIEPK-KVQQQPLPGSAMAKPKNGTG--GAAGKKV 60
           MGN C ++N+VMAQD++    P   L E   KV+ +P  GSA+A+PK       A  KKV
Sbjct: 43  MGN-CLRNNRVMAQDEACSPSPNSSLTETNYKVEDKPAAGSALARPKTEEARIAARRKKV 102

Query: 61  VRFNLQEEEKDEEERNSGDSGPGVLRIKVVISQKELKQILKNRENNSCSLEELIEELKVK 120
           VRF  +E+E           G GVLRIKVV+SQKELKQILK+RE+NS +LEEL+ ELK+K
Sbjct: 103 VRFQQREDE-------ISGGGGGVLRIKVVVSQKELKQILKDRESNSSTLEELLAELKMK 162

Query: 121 GRATTVS-----ADETGSWKPALECIPE 141
           GR  + +      DE GSW+PALE IPE
Sbjct: 163 GRTISDARADNEEDENGSWRPALESIPE 182

BLAST of CSPI02G26520 vs. ExPASy TrEMBL
Match: A0A5D2LY71 (Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_D02G169500v1 PE=4 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 1.7e-12
Identity = 59/153 (38.56%), Postives = 87/153 (56.86%), Query Frame = 0

Query: 1   MGNICFKSNKVMAQDDSYDDF---PPHHLIEPK-KVQQQPLPGSAMAKPKNG------TG 60
           MGN CF SNK++A++D         P+ LI+    V      G+A     N       T 
Sbjct: 1   MGN-CFTSNKILAENDDLQGCSCNQPNQLIKDMGDVTVSKSEGAADGVKTNNNNMEKKTN 60

Query: 61  GAAGKKVVRFNLQEEEK-DEEERNSGDSGPGVLRIKVVISQKELKQILKNREN-NSCSLE 120
               KKVVRFNL EE   D+     G+S  GV+RI++V++Q+ELKQIL ++++    S+E
Sbjct: 61  KKKKKKVVRFNLNEENSGDDRSGKQGESKNGVVRIRLVVTQEELKQILSSKKDLRQSSME 120

Query: 121 ELIEELKVKG-RATTVSADETGSWKPALECIPE 141
           +LI+ +K++G R +       G+W+PALE IPE
Sbjct: 121 QLIKAVKLRGVRVSEDGRTSDGAWRPALESIPE 152

BLAST of CSPI02G26520 vs. ExPASy TrEMBL
Match: A0A1U8MTK4 (uncharacterized protein LOC107939982 OS=Gossypium hirsutum OX=3635 GN=LOC107939982 PE=4 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 1.7e-12
Identity = 59/153 (38.56%), Postives = 87/153 (56.86%), Query Frame = 0

Query: 1   MGNICFKSNKVMAQDDSYDDF---PPHHLIEPK-KVQQQPLPGSAMAKPKNG------TG 60
           MGN CF SNK++A++D         P+ LI+    V      G+A     N       T 
Sbjct: 1   MGN-CFTSNKILAENDDLQGCSCNQPNQLIKDMGDVTVSKSEGAADGVKTNNNNMEKKTN 60

Query: 61  GAAGKKVVRFNLQEEEK-DEEERNSGDSGPGVLRIKVVISQKELKQILKNREN-NSCSLE 120
               KKVVRFNL EE   D+     G+S  GV+RI++V++Q+ELKQIL ++++    S+E
Sbjct: 61  KKKKKKVVRFNLNEENSGDDRSGKQGESKNGVVRIRLVVTQEELKQILSSKKDLRQSSME 120

Query: 121 ELIEELKVKG-RATTVSADETGSWKPALECIPE 141
           +LI+ +K++G R +       G+W+PALE IPE
Sbjct: 121 QLIKAVKLRGVRVSEDGRTSDGAWRPALESIPE 152

BLAST of CSPI02G26520 vs. NCBI nr
Match: KGN63254.1 (hypothetical protein Csa_022493 [Cucumis sativus])

HSP 1 Score: 292.7 bits (748), Expect = 1.7e-75
Identity = 145/147 (98.64%), Postives = 146/147 (99.32%), Query Frame = 0

Query: 1   MGNICFKSNKVMAQDDSYDDFPPHHLIEPKKVQQQPLPGSAMAKPKNGTGGAAGKKVVRF 60
           MGNICFKSNKVMAQDDSYDDFPPHHLIEPKKVQQQPLPGSAMAKPKNGTGGAAGKKVVRF
Sbjct: 1   MGNICFKSNKVMAQDDSYDDFPPHHLIEPKKVQQQPLPGSAMAKPKNGTGGAAGKKVVRF 60

Query: 61  NLQEEEKDEEERNSGDSGPGVLRIKVVISQKELKQILKNRENNSCSLEELIEELKVKGRA 120
           NLQEEEKDEE RNSGDSGPGVLRIKVVISQKELKQILK+RENNSCSLEELIEELKVKGRA
Sbjct: 61  NLQEEEKDEEGRNSGDSGPGVLRIKVVISQKELKQILKSRENNSCSLEELIEELKVKGRA 120

Query: 121 TTVSADETGSWKPALECIPEGESTLMN 148
           TTVSADETGSWKPALECIPEGESTLMN
Sbjct: 121 TTVSADETGSWKPALECIPEGESTLMN 147

BLAST of CSPI02G26520 vs. NCBI nr
Match: TYK24218.1 (hypothetical protein E5676_scaffold27G00200 [Cucumis melo var. makuwa])

HSP 1 Score: 241.5 bits (615), Expect = 4.6e-60
Identity = 125/147 (85.03%), Postives = 135/147 (91.84%), Query Frame = 0

Query: 1   MGNICFKSNKVMAQDDSYDDFPPHHLIEPKKVQQQPL-PGSAMAKPKNGTGGAAGKKVVR 60
           MGNICF++NKVMAQDDSYD+ PP   IE +KV++QPL PGSAMAKPKNGTGGAAGKKVVR
Sbjct: 1   MGNICFRTNKVMAQDDSYDNLPPDQFIEAEKVEEQPLRPGSAMAKPKNGTGGAAGKKVVR 60

Query: 61  FNLQEEEKDEEERNSG-DSGPGVLRIKVVISQKELKQILKNRENNSCSLEELIEELKVKG 120
           FNLQEEE+D+E+RNSG DSG GVLRIKVVISQKELK+ILKNRENNSCSLEELIEELKVKG
Sbjct: 61  FNLQEEEEDQEDRNSGDDSGAGVLRIKVVISQKELKEILKNRENNSCSLEELIEELKVKG 120

Query: 121 RATTVSADETGSWKPALECIPEGESTL 146
           RATTVS DE GSWKPALECIPEGE  L
Sbjct: 121 RATTVS-DEIGSWKPALECIPEGEGDL 146

BLAST of CSPI02G26520 vs. NCBI nr
Match: XP_038902397.1 (uncharacterized protein LOC120089037 [Benincasa hispida])

HSP 1 Score: 166.8 bits (421), Expect = 1.4e-37
Identity = 100/150 (66.67%), Postives = 110/150 (73.33%), Query Frame = 0

Query: 1   MGNICFKSNKVMAQDDSYDDFPPHHLIEPKKVQQQPLPGSAMAKPKNGTG--GAAGKKVV 60
           MGN CFKSNKVMAQD+  D  PP   IE KKV+++P PGSAMAKPK      G A KKVV
Sbjct: 1   MGNNCFKSNKVMAQDEPEDLLPP---IEAKKVEEKPRPGSAMAKPKTAEARTGGASKKVV 60

Query: 61  RFNLQEEEKDEEERNSGDSGPGVLRIKVVISQKELKQILKNRENNSCSLEELIEELKVKG 120
           RF LQE    EEE+NSGD   GVLRIKVV+SQKELKQ+LK+RENNSC+LEELI ELKVKG
Sbjct: 61  RFKLQE----EEEKNSGDG--GVLRIKVVMSQKELKQMLKDRENNSCTLEELITELKVKG 120

Query: 121 RATTVS-------ADETGSWKPALECIPEG 142
           R TT+S        DE G WKP LE IPEG
Sbjct: 121 R-TTISDGRIDAVEDENGRWKPDLEGIPEG 140

BLAST of CSPI02G26520 vs. NCBI nr
Match: KAG6570883.1 (hypothetical protein SDJN03_29798, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 155.6 bits (392), Expect = 3.3e-34
Identity = 96/155 (61.94%), Postives = 108/155 (69.68%), Query Frame = 0

Query: 1   MGNICFKSNKVMAQDDS---YDDFPPHHLIEPKKVQQQPLPGSAMAKPKNG---TGGAAG 60
           MGN CFKSNKVMAQD+S     + PP   +E KKV+++P+ GSAMAKPK     +G AAG
Sbjct: 1   MGNSCFKSNKVMAQDESCLALSNSPP---VEAKKVEEKPVAGSAMAKPKTAEERSGAAAG 60

Query: 61  KKVVRFNLQEEEKDEEERNSGDSG--PGVLRIKVVISQKELKQILKNRENNSCSLEELIE 120
           KKVVRF LQEE  DE    SG  G   GVLRIKVV+SQ+ELKQILK  EN+S SLEELI 
Sbjct: 61  KKVVRFKLQEE--DENSGGSGGDGDRAGVLRIKVVMSQRELKQILKENENSSRSLEELIA 120

Query: 121 ELKVKGRATTVSA------DETGSWKPALECIPEG 142
           E KVKGR T   A      DE GS +PALECIPEG
Sbjct: 121 EFKVKGRTTVSDAITDEVEDENGSRRPALECIPEG 150

BLAST of CSPI02G26520 vs. NCBI nr
Match: XP_022140639.1 (uncharacterized protein LOC111011249 [Momordica charantia])

HSP 1 Score: 122.9 bits (307), Expect = 2.4e-24
Identity = 76/148 (51.35%), Postives = 96/148 (64.86%), Query Frame = 0

Query: 1   MGNICFKSNKVMAQDDSYDDFPPHHLIEPK-KVQQQPLPGSAMAKPKNGTG--GAAGKKV 60
           MGN C ++N+VMAQD++    P   L E   KV+ +P  GSA+A+PK       A  KKV
Sbjct: 43  MGN-CLRNNRVMAQDEACSPSPNSSLTETNYKVEDKPAAGSALARPKTEEARIAARRKKV 102

Query: 61  VRFNLQEEEKDEEERNSGDSGPGVLRIKVVISQKELKQILKNRENNSCSLEELIEELKVK 120
           VRF  +E+E           G GVLRIKVV+SQKELKQILK+RE+NS +LEEL+ ELK+K
Sbjct: 103 VRFQQREDE-------ISGGGGGVLRIKVVVSQKELKQILKDRESNSSTLEELLAELKMK 162

Query: 121 GRATTVS-----ADETGSWKPALECIPE 141
           GR  + +      DE GSW+PALE IPE
Sbjct: 163 GRTISDARADNEEDENGSWRPALESIPE 182

BLAST of CSPI02G26520 vs. TAIR 10
Match: AT3G21680.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: root, flower, stamen; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; Has 34 Blast hits to 34 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 50.4 bits (119), Expect = 1.4e-06
Identity = 30/80 (37.50%), Postives = 48/80 (60.00%), Query Frame = 0

Query: 68  DEEERNSGDSGPGVLRIKVVISQKELKQILKNRENNSCSLEELIEELKVKGRATTVSADE 127
           +EE   S +    V+RIKVV+++KEL+QIL   +N   S+++L+  LK  GR  ++++ E
Sbjct: 38  EEESERSTEEESKVVRIKVVVTKKELRQIL-GHKNGINSIQQLVHVLKDSGRNISMASYE 97

Query: 128 TG-------SWKPALECIPE 141
                    +W+P LE IPE
Sbjct: 98  EDEKEEGDENWRPTLESIPE 116

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0LQE98.4e-7698.64Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G418890 PE=4 SV=1[more]
A0A5D3DKZ82.2e-6085.03Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A6J1CG851.2e-2451.35uncharacterized protein LOC111011249 OS=Momordica charantia OX=3673 GN=LOC111011... [more]
A0A5D2LY711.7e-1238.56Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_D02G169500v1 P... [more]
A0A1U8MTK41.7e-1238.56uncharacterized protein LOC107939982 OS=Gossypium hirsutum OX=3635 GN=LOC1079399... [more]
Match NameE-valueIdentityDescription
KGN63254.11.7e-7598.64hypothetical protein Csa_022493 [Cucumis sativus][more]
TYK24218.14.6e-6085.03hypothetical protein E5676_scaffold27G00200 [Cucumis melo var. makuwa][more]
XP_038902397.11.4e-3766.67uncharacterized protein LOC120089037 [Benincasa hispida][more]
KAG6570883.13.3e-3461.94hypothetical protein SDJN03_29798, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022140639.12.4e-2451.35uncharacterized protein LOC111011249 [Momordica charantia][more]
Match NameE-valueIdentityDescription
AT3G21680.11.4e-0637.50unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 93..113
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 30..56
NoneNo IPR availablePANTHERPTHR33148PLASTID MOVEMENT IMPAIRED PROTEIN-RELATEDcoord: 1..141
NoneNo IPR availablePANTHERPTHR33148:SF55OS01G0219300 PROTEINcoord: 1..141

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI02G26520.1CSPI02G26520.1mRNA