CSPI02G26520 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTCATTTCAATTTTCTTCAATAGTAACAACAATCCAATGGGGAATATCTGCTTTAAAAGCAACAAAGTTATGGCTCAAGACGACTCTTATGATGATTTTCCTCCTCATCACTTGATTGAACCTAAGAAAGTCCAGCAACAACCGCTTCCTGGATCCGCGATGGCCAAGCCAAAGAACGGAACCGGGGGTGCGGCTGGTAAGAAGGTAGTGAGGTTTAATTTACAAGAAGAAGAAAAAGACGAAGAGGAGAGAAATTCCGGGGACTCTGGACCCGGAGTGTTGAGGATTAAAGTGGTGATATCTCAGAAAGAGTTAAAACAGATATTGAAGAATAGAGAGAATAATTCGTGTTCATTGGAGGAATTGATTGAGGAGTTGAAGGTGAAAGGCAGAGCGACGACGGTTTCTGCAGATGAAACTGGAAGCTGGAAGCCGGCTTTGGAATGTATTCCAGAAGGTGAATCTACATTAATGAATTGAAAGTTCTCTTGATCTGATCATCTCTTTAGTCGTTTTTGTTAGTAAATCTGTGAAATATTAGTGTAATTATTGTCTTGGTGTGTTATTTAATCACCAAAACTGTTACTGAATATCTGTGTGCATGTGATTCTTAGAAGGTGGAGTTGTGTGTTTCTTGAATAACAATATATAGGTGATAATGTATACTTAAGTAATTTTTGTAACAATCGTAGCTACAATTTTGAGATTGGAATAACAACTTGATATATGTTTATGGTTTTTTCCACCTTCGTCCATTAAAATATTTGACTACTACTCATACTCCCAATCTCCAAATTGGTATCACCGACACATTTTTTAGTATAGGCCTACGGCTTCAGTCTCCTTTACCTTCTCAACCTTATGTTATTGAAATAATAAATAGCTTTGATAAAATTATCTTTCAAACACTCTTTAGACCCAACTTCAAGCCACACCCTTTATGCAACAAAATTTTTGGATCTTCCATTCATTGTTATTATATTCTCTTCTCTTCTCCACGT ATTCATTTCAATTTTCTTCAATAGTAACAACAATCCAATGGGGAATATCTGCTTTAAAAGCAACAAAGTTATGGCTCAAGACGACTCTTATGATGATTTTCCTCCTCATCACTTGATTGAACCTAAGAAAGTCCAGCAACAACCGCTTCCTGGATCCGCGATGGCCAAGCCAAAGAACGGAACCGGGGGTGCGGCTGGTAAGAAGGTAGTGAGGTTTAATTTACAAGAAGAAGAAAAAGACGAAGAGGAGAGAAATTCCGGGGACTCTGGACCCGGAGTGTTGAGGATTAAAGTGGTGATATCTCAGAAAGAGTTAAAACAGATATTGAAGAATAGAGAGAATAATTCGTGTTCATTGGAGGAATTGATTGAGGAGTTGAAGGTGAAAGGCAGAGCGACGACGGTTTCTGCAGATGAAACTGGAAGCTGGAAGCCGGCTTTGGAATGTATTCCAGAAGGTGAATCTACATTAATGAATTGAAAGTTCTCTTGATCTGATCATCTCTTTAGTCGTTTTTGTTAGTAAATCTGTGAAATATTAGTGTAATTATTGTCTTGGTGTGTTATTTAATCACCAAAACTGTTACTGAATATCTGTGTGCATGTGATTCTTAGAAGGTGGAGTTGTGTGTTTCTTGAATAACAATATATAGGTGATAATGTATACTTAAGTAATTTTTGTAACAATCGTAGCTACAATTTTGAGATTGGAATAACAACTTGATATATGTTTATGGTTTTTTCCACCTTCGTCCATTAAAATATTTGACTACTACTCATACTCCCAATCTCCAAATTGGTATCACCGACACATTTTTTAGTATAGGCCTACGGCTTCAGTCTCCTTTACCTTCTCAACCTTATGTTATTGAAATAATAAATAGCTTTGATAAAATTATCTTTCAAACACTCTTTAGACCCAACTTCAAGCCACACCCTTTATGCAACAAAATTTTTGGATCTTCCATTCATTGTTATTATATTCTCTTCTCTTCTCCACGT ATGGGGAATATCTGCTTTAAAAGCAACAAAGTTATGGCTCAAGACGACTCTTATGATGATTTTCCTCCTCATCACTTGATTGAACCTAAGAAAGTCCAGCAACAACCGCTTCCTGGATCCGCGATGGCCAAGCCAAAGAACGGAACCGGGGGTGCGGCTGGTAAGAAGGTAGTGAGGTTTAATTTACAAGAAGAAGAAAAAGACGAAGAGGAGAGAAATTCCGGGGACTCTGGACCCGGAGTGTTGAGGATTAAAGTGGTGATATCTCAGAAAGAGTTAAAACAGATATTGAAGAATAGAGAGAATAATTCGTGTTCATTGGAGGAATTGATTGAGGAGTTGAAGGTGAAAGGCAGAGCGACGACGGTTTCTGCAGATGAAACTGGAAGCTGGAAGCCGGCTTTGGAATGTATTCCAGAAGGTGAATCTACATTAATGAATTGA MGNICFKSNKVMAQDDSYDDFPPHHLIEPKKVQQQPLPGSAMAKPKNGTGGAAGKKVVRFNLQEEEKDEEERNSGDSGPGVLRIKVVISQKELKQILKNRENNSCSLEELIEELKVKGRATTVSADETGSWKPALECIPEGESTLMN* Homology
BLAST of CSPI02G26520 vs. ExPASy TrEMBL
Match: A0A0A0LQE9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G418890 PE=4 SV=1) HSP 1 Score: 292.7 bits (748), Expect = 8.4e-76 Identity = 145/147 (98.64%), Postives = 146/147 (99.32%), Query Frame = 0
BLAST of CSPI02G26520 vs. ExPASy TrEMBL
Match: A0A5D3DKZ8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold27G00200 PE=4 SV=1) HSP 1 Score: 241.5 bits (615), Expect = 2.2e-60 Identity = 125/147 (85.03%), Postives = 135/147 (91.84%), Query Frame = 0
BLAST of CSPI02G26520 vs. ExPASy TrEMBL
Match: A0A6J1CG85 (uncharacterized protein LOC111011249 OS=Momordica charantia OX=3673 GN=LOC111011249 PE=4 SV=1) HSP 1 Score: 122.9 bits (307), Expect = 1.2e-24 Identity = 76/148 (51.35%), Postives = 96/148 (64.86%), Query Frame = 0
BLAST of CSPI02G26520 vs. ExPASy TrEMBL
Match: A0A5D2LY71 (Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_D02G169500v1 PE=4 SV=1) HSP 1 Score: 82.4 bits (202), Expect = 1.7e-12 Identity = 59/153 (38.56%), Postives = 87/153 (56.86%), Query Frame = 0
BLAST of CSPI02G26520 vs. ExPASy TrEMBL
Match: A0A1U8MTK4 (uncharacterized protein LOC107939982 OS=Gossypium hirsutum OX=3635 GN=LOC107939982 PE=4 SV=1) HSP 1 Score: 82.4 bits (202), Expect = 1.7e-12 Identity = 59/153 (38.56%), Postives = 87/153 (56.86%), Query Frame = 0
BLAST of CSPI02G26520 vs. NCBI nr
Match: KGN63254.1 (hypothetical protein Csa_022493 [Cucumis sativus]) HSP 1 Score: 292.7 bits (748), Expect = 1.7e-75 Identity = 145/147 (98.64%), Postives = 146/147 (99.32%), Query Frame = 0
BLAST of CSPI02G26520 vs. NCBI nr
Match: TYK24218.1 (hypothetical protein E5676_scaffold27G00200 [Cucumis melo var. makuwa]) HSP 1 Score: 241.5 bits (615), Expect = 4.6e-60 Identity = 125/147 (85.03%), Postives = 135/147 (91.84%), Query Frame = 0
BLAST of CSPI02G26520 vs. NCBI nr
Match: XP_038902397.1 (uncharacterized protein LOC120089037 [Benincasa hispida]) HSP 1 Score: 166.8 bits (421), Expect = 1.4e-37 Identity = 100/150 (66.67%), Postives = 110/150 (73.33%), Query Frame = 0
BLAST of CSPI02G26520 vs. NCBI nr
Match: KAG6570883.1 (hypothetical protein SDJN03_29798, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 155.6 bits (392), Expect = 3.3e-34 Identity = 96/155 (61.94%), Postives = 108/155 (69.68%), Query Frame = 0
BLAST of CSPI02G26520 vs. NCBI nr
Match: XP_022140639.1 (uncharacterized protein LOC111011249 [Momordica charantia]) HSP 1 Score: 122.9 bits (307), Expect = 2.4e-24 Identity = 76/148 (51.35%), Postives = 96/148 (64.86%), Query Frame = 0
BLAST of CSPI02G26520 vs. TAIR 10
Match: AT3G21680.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: root, flower, stamen; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; Has 34 Blast hits to 34 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 50.4 bits (119), Expect = 1.4e-06 Identity = 30/80 (37.50%), Postives = 48/80 (60.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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