CSPI02G26260 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI02G26260
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Integrase
Location	Chr2: 22318674 .. 22323241 (-)
RNA-Seq Expression	CSPI02G26260
Synteny	CSPI02G26260

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAATTGGGTTTAAAGTTAAGTAAGCATGATGTTAGTGAAGCTTTTGATGCCACCATTTATAGAAGTTTGGTTGGAAGTTTAATGTATTTAACTACAACTAGACCTGATATTATGTTCTTGGTCAGTTTATTGAGTAGATTTATTACATCACCAAAGAGAAGTCATTGCGAAGTTGGAAAGAGAGTTCTTAGATACATTCTTGGAACTGTTGATCATGGAATCCACTATAAAAGGAATGTGGATAATGTTCTTGTTGGCTACAGTGATAGTGATTGGGGAGGAAATATTGATGATTTCAAAAGTACTTCTGAGTATGTATTTAATATTGGTTCTGAAGCAGTTTAATGGGCATCAAAGAAGCAAGATGTTGTAGCATTGTCAACAACATAAGTTGAATACATTTCTTTGTCTGTTGCTAGTTGCCAAGCACTTTGGCTAAGAAATGTACTACATGAATTGAAGTGTCCTCAAGAGAAAGAGACCATCATGTTCTGTGACAATCAATCATCTATTTCACTTTCGAAGAATTCCGTTTTTTCATGGAAGAAGCAAACACATAAAGATCAAGTATCATTTCATTAAAGAATTGATCAAAGATGGAGAAGTATATACCAAGTACTGGAAGACCCAAGATCAAGTTGCAGACATATTCACAAAAGCATTAAAGACACATTCATTCTCGAAAATGAAAGAGAAGCTCAGAGTTTGGGAAGTCTAGCTTAAGGGGGCATGTTAGAAATTAATAAGCTAGATACATTATGGATAACACATTAATAGATACATTTCTAATTTCAAGTTATATATGCATTTCTAGATACATGTAATTATTCAAGTACATGAATGATATGTATACATGTACTTCATTTATTTTGTGTCTTTCACGAAGTGTCTCTTGAGTACTATATATAGAGATCCTTTCCTTCATTTGTATGCAAGATAAATGAATCAAATCAATAGAAGCAAATTAGGTTTTAGAAATTAAGTGAGTTTCAAGAGAACAATATTCTTTTCTTGCGTGTCATTGAGTTTTCCGAGAGAATAAGTTTCTTCTCCTCTTAAAAGTTTGTGAGATTTAGAGTAAATTTAGAGTGGGCTCGTTAACACCTCCAACGCTTTCACTATCTCAAGGACTAATATTGAGCATTATAGAATTCTCAGTAACAAAAGTGTTAAATTTTGAAACATATAAACTAAACACAAATTAAACTAAAACTTAAAAGAGCTAAAAGAGTATTAATTTTCTCTTCTATATAGCAAGTTTAAGTCCCAAAAACTAAATTTTTATAAGTTTAATGTTTTTGAAATTTATGTTTGTGAAGGTTGTATTTATGGCAAGCAAGAAAGAGTTTTCCAAAATAATATTCTTCAAGAGCAAGGAACAAATCAAAAGAATGCTGCAAAAATACAATTCTAATGTGCCTTGAAACAATTCCTTAAATTCTTAACCTTTTCCTAGGTTGATTTTTCTCACTAAACACTTCCATGGGATGAGATGACCTAGAGCTACTACCTTAGCTTAGAGGAACTTTTGTTCTTAAGGATACTGACTTGAAAATTTGAGAAGATGCTCGAGGAAAATGATGAAAGTAGAAGAGTTGTTTTACTTGAGAATGTACCAAATTACATAGTACAAACATGCACTTTGTAACATGAATCCGTAATAAACATGGAATATATTAATCTATAGATATTAAAAAATAGAAGAAGTTAAATGATATTTTTATCAGATAAGATAATAAACATGGGTTGAATTAACAATTAGAAGAGTAACCCCTTTATTTTATTAAAATTGCGGGGTCATATCATCTTTCCAACATGAGATTCTACACATATTTAATATAGTTTTAGAGAAATAAGAAATACACATCTCACGTAGTATATTATTCTCTCTAAAAAAATTCCAGTCCAAAAAAAGGGTTAAAGTATAGATATAACTAAAACTACTTTTATTTGAAGATTTAACCAACAAACCTAACTTTTTTTTATTGCATATGCAGATGAAAGAGAGAGCAATCTTCATCCCTATTTTCCTGTTCATCCTTTACAACTTTCAACAACTGTTACAATACAAAGAAACAGGTCAATCATTAAGAGCTTGGTGGAATAACCAAAAAATGGGAAGAGTAAACACCATATGTGCATGGTTGTTCGGAGTAAGGAATGTGGTTCTAAACTTTTTAGGTGGAAAAGAAACTGTGTTCGAAGTAACAAAGAAAGAGACGTGTTGTGAGGTAAATTTAGGGCATTTTACCTTTGATGAGTCTCCCATGTATGTGCCAGGGACGACCATTATGTTGCTCCAATTTATTGCTTTATTCATGAGCTTCATAAGGCTAGAGAGACCAAGAAGTGCAGTGCTCGAGGTGGTTTGTAGCATATGGTTACTTTTATGCTTTTGGCCATTCTTAAAGGGAATCTTTATGTTTGGTAAAGGAAGATGTGGACTTTCTTTTTCCACCATATACAAATCAGTCGCGTTAGCACTATTGTTTGTGCTTTTATGCCAAACAACAACCATGAATTAACTTAGACAACTTGATGATTGTGTTGTTTTTATTAATAAGCTCTGATATAAGGTATGCTCATTAAGTTTGTCTTGAAGTCTACTATTGTAGTGAATTAACTCATAAATAAATATTCTTTTAAGCTTGCAAATTATTTGTTGTTTACCTTGTTTTTCGAATCCCTACACTACTACAAAACTGGTAATACTTGACGCTTTTTACCTGTCAAGTATTTATTTATTTGATGTTTTTCAATGCGTCAAGTAATCTAGTGTCAAGAATAAGGAAAGTTTACCTGACAGATTTTAAGTGTCAAGTATAATTGTATACTTGACAGGTAAAAAACGTTAAGTATATTAGATTACTTGATGTTTTTTACACGTCAAGTAATCCAGTGTCAAGAATAAGGAGACTTTTTGTTTGACAGTTTATAGACGTCAAGAATTTGTTTATTCTTGACACGTTTTGCATGTCAATATTTTTTTTTTTCTTTCAAATAAAAAATTGTACAATTTGAATCTATATAATTATATTGCACCTGTTTTGAAGTCCACTCACACACATATAAGTAGAGCATTTGAGATTACACAAAGTTATTAAACTACGCATATTAATTAAACAATTGAATCAATCCAAACTTTCCATCAGAGAACTACAAATTGCATATATGACTTAATCATACACATAGTCATTACATACTTAATTATAATGGCCCAAACTTCTACCATATGAAGATATTGTTGTACCTAGCTCCAAGTCTAATACGAAAAAGCTTAAAGTCTCTGTAAAATGTAAATATGAGAAAAAAGCTAACATTTGGTCAAAGTAGCTCTGGATTCTTTCGTAGCATATCCTTAATGTAAATAAGTGTTTTCGTAGCATATCATATACGTAGAAAAAATCACGAGTTTCAACACTAGACTGCACACGACAACTAACTAAGCTAAGCATGAGTATGTTTATTCTCAATTGCATATTAGTGTTTACTCACTAAAACTAAGTAAACCATACAAAGAAAGAAGCCATTCAAGGAACAAGTTATCCAAAATCACTACAGAAATAAGCTAAGCAAAAGCATAGAAAACTTGAAAGAAAAGAAGAAAAAAAAGAACCACTTGAAGTTCATATTTAAGTTTTTCCCTATGAGATATGGTACGAAAAACTAACTAAAATGATGAAAGAAAACAAGTCCAACATACTATTTTCTCCATTGCAGAAAGGTAGCTTATTTATTTTAAGAACTCAAGAAAAGTAGGAACTCAATTTAACCCCCTTCACCATATTCAAACATTCAAATCATTCAAATATTAATACGGTAAAATTACATCTAGACTTTAAAAAAAACTAAAGCTAATGATTTTGTATAAGAGGCATGGGGATGGGTTGGAATTTTAAAAAAAGTCTCAACTGTTTTCAAAACAAAGATTCAGTGGAGAACTTTTCAAATAACCATACAATTACTTAACTTCCTATTATTGTTAGTTGTGTTAATAGCACAACTCATGTTCTTCTTCCTATAATTATGGATATATGTACAGTTTTTTAACTGCACTAAAACCATGACAACTTTTTTCATATGGCACTAAACACTTTCTTATTTGAAATCAATGTATATGATATGGATGACTTATATATTACGACTTATATGACCGATATGACTAATAATTTTATGACTGATAAGAATATGTTATGATGCATGAAATATTAATCACATGATAAGGACGTTATGACTGATATTCATGTCAGATTTATGATGTTTATGATATGTTACATGCTATGGATAGGTGTTCTGCTAACTTTGTCTGTTACGGTCGTACCTATATGAGTGTCCCTCGGGATCACTACCTTTTTATGACTGATGTGAGTTCGACGAGACCACTAGTCTATCATGTTATATTTTATGAGTGGCCTGATGGGGTCACTTACACCCCGATTCTCTTAGGTGTTTCCTTTGGATTTATCGAGAGCCCAGATGTGTCCCTACGTGATCAATGGATAGCGTGTGTTCGAAACCATGATAGTTTTGGAGAATTTCCTTACGAAACCCTAATGGGAAGTTAA

mRNA sequence

ATGGAATTGGGTTTAAAGTTAAGTAAGCATGATGTTAGTGAAGCTTTTGATGCCACCATTTATAGAAGTTTGGTTGGAAGTTTAATGTATTTAACTACAACTAGACCTGATATTATGTTCTTGGTCAGTTTATTGAGTAGATTTATTACATCACCAAAGAGAAGTCATTGCGAAGTTGGAAAGAGAGTTCTTAGATACATTCTTGGAACTGTTGATCATGGAATCCACTATAAAAGGAATGTGGATAATGTTCTTGTTGGCTACAGTGATAGTGATTGGGGAGGAAATATTGATGATTTCAAAAGTACTTCTGATTGCCAAGCACTTTGGCTAAGAAATGTACTACATGAATTGAAGTGTCCTCAAGAGAAAGAGACCATCATGTTCTGTGACAATCAATCATCTATTTCACTTTCGAAGAATTCCGTTTTTTCATGGAAGAAGCAAACACATAAAGATCAAATGAAAGAGAGAGCAATCTTCATCCCTATTTTCCTGTTCATCCTTTACAACTTTCAACAACTGTTACAATACAAAGAAACAGGTCAATCATTAAGAGCTTGGTGGAATAACCAAAAAATGGGAAGAGTAAACACCATATGTGCATGGTTGTTCGGAGTAAGGAATGTGGTTCTAAACTTTTTAGGTGGAAAAGAAACTGTGTTCGAAGTAACAAAGAAAGAGACGTGTTGTGAGGTAAATTTAGGGCATTTTACCTTTGATGAGTCTCCCATGTATGTGCCAGGGACGACCATTATGTTGCTCCAATTTATTGCTTTATTCATGAGCTTCATAAGGCTAGAGAGACCAAGAAGTGCAGTGCTCGAGGTGATTTATGATGTTTATGATATGTTACATGCTATGGATAGGTGTTCTGCTAACTTTGTCTGTTACGGTCGTACCTATATGAGTGTCCCTCGGGATCACTACCTTTTTATGACTGATGTGAGTTCGACGAGACCACTAGTCTATCATGTTATATTTTATGAGTGGCCTGATGGGGTCACTTACACCCCGATTCTCTTAGGTGTTTCCTTTGGATTTATCGAGAGCCCAGATGTGTCCCTACGTGATCAATGGATAGCGTGTGTTCGAAACCATGATAGTTTTGGAGAATTTCCTTACGAAACCCTAATGGGAAGTTAA

Coding sequence (CDS)

ATGGAATTGGGTTTAAAGTTAAGTAAGCATGATGTTAGTGAAGCTTTTGATGCCACCATTTATAGAAGTTTGGTTGGAAGTTTAATGTATTTAACTACAACTAGACCTGATATTATGTTCTTGGTCAGTTTATTGAGTAGATTTATTACATCACCAAAGAGAAGTCATTGCGAAGTTGGAAAGAGAGTTCTTAGATACATTCTTGGAACTGTTGATCATGGAATCCACTATAAAAGGAATGTGGATAATGTTCTTGTTGGCTACAGTGATAGTGATTGGGGAGGAAATATTGATGATTTCAAAAGTACTTCTGATTGCCAAGCACTTTGGCTAAGAAATGTACTACATGAATTGAAGTGTCCTCAAGAGAAAGAGACCATCATGTTCTGTGACAATCAATCATCTATTTCACTTTCGAAGAATTCCGTTTTTTCATGGAAGAAGCAAACACATAAAGATCAAATGAAAGAGAGAGCAATCTTCATCCCTATTTTCCTGTTCATCCTTTACAACTTTCAACAACTGTTACAATACAAAGAAACAGGTCAATCATTAAGAGCTTGGTGGAATAACCAAAAAATGGGAAGAGTAAACACCATATGTGCATGGTTGTTCGGAGTAAGGAATGTGGTTCTAAACTTTTTAGGTGGAAAAGAAACTGTGTTCGAAGTAACAAAGAAAGAGACGTGTTGTGAGGTAAATTTAGGGCATTTTACCTTTGATGAGTCTCCCATGTATGTGCCAGGGACGACCATTATGTTGCTCCAATTTATTGCTTTATTCATGAGCTTCATAAGGCTAGAGAGACCAAGAAGTGCAGTGCTCGAGGTGATTTATGATGTTTATGATATGTTACATGCTATGGATAGGTGTTCTGCTAACTTTGTCTGTTACGGTCGTACCTATATGAGTGTCCCTCGGGATCACTACCTTTTTATGACTGATGTGAGTTCGACGAGACCACTAGTCTATCATGTTATATTTTATGAGTGGCCTGATGGGGTCACTTACACCCCGATTCTCTTAGGTGTTTCCTTTGGATTTATCGAGAGCCCAGATGTGTCCCTACGTGATCAATGGATAGCGTGTGTTCGAAACCATGATAGTTTTGGAGAATTTCCTTACGAAACCCTAATGGGAAGTTAA

Protein sequence

MELGLKLSKHDVSEAFDATIYRSLVGSLMYLTTTRPDIMFLVSLLSRFITSPKRSHCEVGKRVLRYILGTVDHGIHYKRNVDNVLVGYSDSDWGGNIDDFKSTSDCQALWLRNVLHELKCPQEKETIMFCDNQSSISLSKNSVFSWKKQTHKDQMKERAIFIPIFLFILYNFQQLLQYKETGQSLRAWWNNQKMGRVNTICAWLFGVRNVVLNFLGGKETVFEVTKKETCCEVNLGHFTFDESPMYVPGTTIMLLQFIALFMSFIRLERPRSAVLEVIYDVYDMLHAMDRCSANFVCYGRTYMSVPRDHYLFMTDVSSTRPLVYHVIFYEWPDGVTYTPILLGVSFGFIESPDVSLRDQWIACVRNHDSFGEFPYETLMGS*

Homology

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BLAST of CSPI02G26260 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 8.9e-18
Identity = 46/99 (46.46%), Postives = 63/99 (63.64%), Query Frame = 0


Query: 6    KLSKHDVSEAFDATIYRSLVGSLMYLTTTRPDIMFLVSLLSRFITSPKRSHCEVGKRVLR 65
            KLS +  ++  D T YR +VGSL YL  TRPDI + V+ LS+F+  P   H +  KR+LR
Sbjct: 1230 KLSLYSGTKLTDPTEYRGIVGSLQYLAFTRPDISYAVNRLSQFMHMPTEEHLQALKRILR 1289

Query: 66   YILGTVDHGIHYKRNVDNVLVGYSDSDWGGNIDDFKSTS 105
            Y+ GT +HGI  K+     L  YSD+DW G+ DD+ ST+
Sbjct: 1290 YLAGTPNHGIFLKKGNTLSLHAYSDADWAGDKDDYVSTN 1328

[Close]

BLAST of CSPI02G26260 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 1.2e-17
Identity = 46/99 (46.46%), Postives = 62/99 (62.63%), Query Frame = 0


Query: 6    KLSKHDVSEAFDATIYRSLVGSLMYLTTTRPDIMFLVSLLSRFITSPKRSHCEVGKRVLR 65
            KL+ H  ++  D T YR +VGSL YL  TRPD+ + V+ LS+++  P   H    KRVLR
Sbjct: 1213 KLTLHSGTKLPDPTEYRGIVGSLQYLAFTRPDLSYAVNRLSQYMHMPTDDHWNALKRVLR 1272

Query: 66   YILGTVDHGIHYKRNVDNVLVGYSDSDWGGNIDDFKSTS 105
            Y+ GT DHGI  K+     L  YSD+DW G+ DD+ ST+
Sbjct: 1273 YLAGTPDHGIFLKKGNTLSLHAYSDADWAGDTDDYVSTN 1311

[Close]

BLAST of CSPI02G26260 vs. ExPASy Swiss-Prot
Match: Q7XUU0 (Putative cellulose synthase-like protein H3 OS=Oryza sativa subsp. japonica OX=39947 GN=CSLH3 PE=3 SV=3)

HSP 1 Score: 90.5 bits (223), Expect = 4.4e-17
Identity = 46/120 (38.33%), Postives = 67/120 (55.83%), Query Frame = 0


Query: 149 QTHKDQMKERAIFIPIFLFILYNFQQLLQYKETGQSLRAWWNNQKMGRVNTICAWLFGVR 208
           Q+   +  E    I + LF+ YN    ++Y E G S+RAWWNN +M R+ +  AWL    
Sbjct: 602 QSFLSKASENCFNITLALFLTYNTYNFVEYMECGLSVRAWWNNHRMQRIISASAWLLAFF 661

Query: 209 NVVLNFLGGKETVFEVTKKETCC--------EVNLGHFTFDESPMYVPGTTIMLLQFIAL 261
            V+L  +G  ETVFEVT+KE           EV+   FTFD SP+++P T + +L  +A+
Sbjct: 662 TVLLKTIGLSETVFEVTRKEKSTSDGNGQNDEVDPERFTFDASPVFIPVTALTMLNIVAI 721

[Close]

BLAST of CSPI02G26260 vs. ExPASy Swiss-Prot
Match: Q339N5 (Cellulose synthase-like protein H1 OS=Oryza sativa subsp. japonica OX=39947 GN=CSLH1 PE=2 SV=2)

HSP 1 Score: 89.4 bits (220), Expect = 9.9e-17
Identity = 47/120 (39.17%), Postives = 66/120 (55.00%), Query Frame = 0


Query: 149 QTHKDQMKERAIFIPIFLFILYNFQQLLQYKETGQSLRAWWNNQKMGRVNTICAWLFGVR 208
           Q+   +  E   +I + LFI YN    +++ E GQS RA WNN +M R+ +  AWL    
Sbjct: 560 QSFLPKTSEDGFYIALALFIAYNTYMFMEFIECGQSARACWNNHRMQRITSASAWLLAFL 619

Query: 209 NVVLNFLGGKETVFEVTKKETCC--------EVNLGHFTFDESPMYVPGTTIMLLQFIAL 261
            V+L  LG  ETVFEVT+K+           E   G FTFDES +++P T + +L  IA+
Sbjct: 620 TVILKTLGFSETVFEVTRKDKSTSDGDSNTDEPEPGRFTFDESTVFIPVTALAMLSVIAI 679

[Close]

BLAST of CSPI02G26260 vs. ExPASy Swiss-Prot
Match: Q7PC71 (Cellulose synthase-like protein H2 OS=Oryza sativa subsp. indica OX=39946 GN=CSLH2 PE=3 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 1.1e-15
Identity = 44/127 (34.65%), Postives = 66/127 (51.97%), Query Frame = 0


Query: 149 QTHKDQMKERAIFIPIFLFILYNFQQLLQYKETGQSLRAWWNNQKMGRVNTICAWLFGVR 208
           Q+   +  E    +P+ LFI YN    ++Y   G S RAWWNN +M R+ ++ AW     
Sbjct: 571 QSFLPKASEDGFSVPLALFISYNTYNFMEYMACGLSARAWWNNHRMQRIISVSAWTLAFL 630

Query: 209 NVVLNFLGGKETVFEVTKKETCCE--------VNLGHFTFDESPMYVPGTTIMLLQFIAL 268
            V+L  LG  ETVFEVT K+             + G FTFD  P+++P T + +L  +A+
Sbjct: 631 TVLLKSLGLSETVFEVTGKDKSMSDDDDNTDGADPGRFTFDSLPVFIPVTALAMLNIVAV 690

[Close]

BLAST of CSPI02G26260 vs. ExPASy TrEMBL
Match: A0A1S3C389 (cellulose synthase-like protein H1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495979 PE=4 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 1.5e-52
Identity = 105/131 (80.15%), Postives = 118/131 (90.08%), Query Frame = 0


Query: 155 MKERAIFIPIFLFILYNFQQLLQYKETGQSLRAWWNNQKMGRVNTICAWLFGVRNVVLNF 214
           +KERAIFIPIFLFI+YNFQQLLQYKETGQS+RAWWNNQKMGRVNT+CAWLFGV +VVL F
Sbjct: 579 VKERAIFIPIFLFIIYNFQQLLQYKETGQSIRAWWNNQKMGRVNTMCAWLFGVWDVVLKF 638

Query: 215 LGGKETVFEVTKKETCCEVNLGHFTFDESPMYVPGTTIMLLQFIALFMSFIRLERPRSAV 274
           LG +ET FEVTKKETC E+NLGHFTFDESPM+VPGTTI+LLQ IAL   FIRLERP SAV
Sbjct: 639 LGERETAFEVTKKETCSEINLGHFTFDESPMFVPGTTILLLQLIAL---FIRLERPGSAV 698

Query: 275 LEVIYDVYDML 286
           LEV+  ++ +L
Sbjct: 699 LEVVCSIWLLL 706

[Close]

BLAST of CSPI02G26260 vs. ExPASy TrEMBL
Match: A0A1S4E0S9 (cellulose synthase-like protein H2 OS=Cucumis melo OX=3656 GN=LOC107991432 PE=4 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 4.4e-52
Identity = 104/131 (79.39%), Postives = 118/131 (90.08%), Query Frame = 0


Query: 155 MKERAIFIPIFLFILYNFQQLLQYKETGQSLRAWWNNQKMGRVNTICAWLFGVRNVVLNF 214
           M+ERAIFIPI LFI+YNFQQLLQYKETGQS+RAWWNNQ+MGR+NTICAWLFGV NVVL F
Sbjct: 1   MEERAIFIPISLFIIYNFQQLLQYKETGQSVRAWWNNQRMGRINTICAWLFGVGNVVLKF 60

Query: 215 LGGKETVFEVTKKETCCEVNLGHFTFDESPMYVPGTTIMLLQFIALFMSFIRLERPRSAV 274
           LG +ETVFEVTKKETC EV+LGHFTFDESPM+V GTTI+LLQ +AL MSFIRLE+  SAV
Sbjct: 61  LGVRETVFEVTKKETCSEVDLGHFTFDESPMFVTGTTILLLQLVALLMSFIRLEKSGSAV 120

Query: 275 LEVIYDVYDML 286
           LEVI  ++ +L
Sbjct: 121 LEVICSLWLLL 131

[Close]

BLAST of CSPI02G26260 vs. ExPASy TrEMBL
Match: A0A0A0LQD3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G416240 PE=4 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 3.2e-50
Identity = 102/128 (79.69%), Postives = 113/128 (88.28%), Query Frame = 0


Query: 155 MKERAIFIPIFLFILYNFQQLLQYKETGQSLRAWWNNQKMGRVNTICAWLFGVRNVVLNF 214
           M+ERAIFIPI LFI+YNFQQLLQYKETGQS+RAWWNNQ+MGR+NTICAWLFGV N VL  
Sbjct: 569 MEERAIFIPISLFIVYNFQQLLQYKETGQSVRAWWNNQRMGRINTICAWLFGVGNAVLKL 628

Query: 215 LGGKETVFEVTKKETCCEVNLGHFTFDESPMYVPGTTIMLLQFIALFMSFIRLERPRSAV 274
           LG +ETVFEVTKKET CEV+LGHFTFDESPM+V GTTI+LLQ IAL  SFIRL R RSAV
Sbjct: 629 LGVRETVFEVTKKETYCEVDLGHFTFDESPMFVTGTTILLLQLIALLTSFIRLGRSRSAV 688

Query: 275 LEVIYDVY 283
           LEVI  ++
Sbjct: 689 LEVICSLW 696

[Close]

BLAST of CSPI02G26260 vs. ExPASy TrEMBL
Match: A0A1S3C244 (cellulose synthase-like protein H2 OS=Cucumis melo OX=3656 GN=LOC103495982 PE=4 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 5.2e-45
Identity = 95/132 (71.97%), Postives = 111/132 (84.09%), Query Frame = 0


Query: 155 MKERAIFIPIFLFILYNFQQLLQYKETGQSLRAWWNNQKMGRVNTICAWLFGVRNVVLNF 214
           M+ER+I IPIFLFI+YNFQQLL YKETGQS+RAWWNNQ+MGRVNT+CAWLFG+ NVVL F
Sbjct: 273 MEERSISIPIFLFIIYNFQQLLLYKETGQSIRAWWNNQRMGRVNTMCAWLFGLGNVVLKF 332

Query: 215 LGGKETVFEVTKKETCCEVNLGHFTFDESPMYVPGTTIMLLQFIALFMSFIR-LERPRSA 274
           LG +E VFEVTKKET CE +LGHF FDES M+VP T+++LLQ IAL MSFIR   R R+ 
Sbjct: 333 LGVREVVFEVTKKETYCEADLGHFMFDESAMFVPATSLLLLQLIALLMSFIRQAGRMRNT 392

Query: 275 VLEVIYDVYDML 286
           VLEVI  V+ +L
Sbjct: 393 VLEVICSVWLVL 404

[Close]

BLAST of CSPI02G26260 vs. ExPASy TrEMBL
Match: A0A5A7V774 (Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold616G001160 PE=4 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 1.5e-44
Identity = 98/180 (54.44%), Postives = 121/180 (67.22%), Query Frame = 0


Query: 1   MELGLKLSKHDVSEAFDATIYRSLVGSLMYLTTTRPDIMFLVSLLSRFITSPKRSHCEVG 60
           M+  LKL K D+ EA D ++YRSLVGSLMYLT TRPDI+F+VS+LSRF+T+PKRSH E G
Sbjct: 1   MDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFVVSMLSRFMTNPKRSHWEAG 60

Query: 61  KRVLRYILGTVDHGIHYKRNVDNVLVGYSDSDWGGNIDDFKSTS---------------- 120
           KRVLRYILGT++ GI+YK+  ++VL G+ DSDWGGN+DD KSTS                
Sbjct: 61  KRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGGNVDDHKSTSGYVFSMGSGVFSWTSK 120

Query: 121 --------------------DCQALWLRNVLHELKCPQEKETIMFCDNQSSISLSKNSVF 145
                                CQALWLR +L ELKC Q+ ET++FCDN S+I+LSKN VF
Sbjct: 121 KQYVVALSTTEAEYISLAAAGCQALWLRWMLKELKCTQKCETVLFCDNGSAIALSKNPVF 180

[Close]

BLAST of CSPI02G26260 vs. NCBI nr
Match: XP_004151937.3 (cellulose synthase-like protein H1 [Cucumis sativus] >KGN63423.2 hypothetical protein Csa_022385 [Cucumis sativus])

HSP 1 Score: 254.6 bits (649), Expect = 1.4e-63
Identity = 122/131 (93.13%), Postives = 128/131 (97.71%), Query Frame = 0


Query: 155 MKERAIFIPIFLFILYNFQQLLQYKETGQSLRAWWNNQKMGRVNTICAWLFGVRNVVLNF 214
           MKERAIFIPIFLFI+YNFQQLLQYKETGQSLRAWWNNQKMGRVNTICAWLFGVRNVVLNF
Sbjct: 569 MKERAIFIPIFLFIIYNFQQLLQYKETGQSLRAWWNNQKMGRVNTICAWLFGVRNVVLNF 628

Query: 215 LGGKETVFEVTKKETCCEVNLGHFTFDESPMYVPGTTIMLLQFIALFMSFIRLERPRSAV 274
           LGGKETVFEVTKKETCCEVNLGHFTFDESPM+VPGTTIMLLQFIALFMSFIRLERPRSAV
Sbjct: 629 LGGKETVFEVTKKETCCEVNLGHFTFDESPMFVPGTTIMLLQFIALFMSFIRLERPRSAV 688

Query: 275 LEVIYDVYDML 286
           LEV+  ++ +L
Sbjct: 689 LEVVCSIWLLL 699

[Close]

BLAST of CSPI02G26260 vs. NCBI nr
Match: XP_008455906.1 (PREDICTED: cellulose synthase-like protein H1 isoform X1 [Cucumis melo])

HSP 1 Score: 216.9 bits (551), Expect = 3.1e-52
Identity = 105/131 (80.15%), Postives = 118/131 (90.08%), Query Frame = 0


Query: 155 MKERAIFIPIFLFILYNFQQLLQYKETGQSLRAWWNNQKMGRVNTICAWLFGVRNVVLNF 214
           +KERAIFIPIFLFI+YNFQQLLQYKETGQS+RAWWNNQKMGRVNT+CAWLFGV +VVL F
Sbjct: 579 VKERAIFIPIFLFIIYNFQQLLQYKETGQSIRAWWNNQKMGRVNTMCAWLFGVWDVVLKF 638

Query: 215 LGGKETVFEVTKKETCCEVNLGHFTFDESPMYVPGTTIMLLQFIALFMSFIRLERPRSAV 274
           LG +ET FEVTKKETC E+NLGHFTFDESPM+VPGTTI+LLQ IAL   FIRLERP SAV
Sbjct: 639 LGERETAFEVTKKETCSEINLGHFTFDESPMFVPGTTILLLQLIAL---FIRLERPGSAV 698

Query: 275 LEVIYDVYDML 286
           LEV+  ++ +L
Sbjct: 699 LEVVCSIWLLL 706

[Close]

BLAST of CSPI02G26260 vs. NCBI nr
Match: XP_016901847.1 (PREDICTED: cellulose synthase-like protein H2 [Cucumis melo])

HSP 1 Score: 215.3 bits (547), Expect = 9.1e-52
Identity = 104/131 (79.39%), Postives = 118/131 (90.08%), Query Frame = 0


Query: 155 MKERAIFIPIFLFILYNFQQLLQYKETGQSLRAWWNNQKMGRVNTICAWLFGVRNVVLNF 214
           M+ERAIFIPI LFI+YNFQQLLQYKETGQS+RAWWNNQ+MGR+NTICAWLFGV NVVL F
Sbjct: 1   MEERAIFIPISLFIIYNFQQLLQYKETGQSVRAWWNNQRMGRINTICAWLFGVGNVVLKF 60

Query: 215 LGGKETVFEVTKKETCCEVNLGHFTFDESPMYVPGTTIMLLQFIALFMSFIRLERPRSAV 274
           LG +ETVFEVTKKETC EV+LGHFTFDESPM+V GTTI+LLQ +AL MSFIRLE+  SAV
Sbjct: 61  LGVRETVFEVTKKETCSEVDLGHFTFDESPMFVTGTTILLLQLVALLMSFIRLEKSGSAV 120

Query: 275 LEVIYDVYDML 286
           LEVI  ++ +L
Sbjct: 121 LEVICSLWLLL 131

[Close]

BLAST of CSPI02G26260 vs. NCBI nr
Match: XP_004151897.1 (cellulose synthase-like protein H1 [Cucumis sativus] >KGN63234.1 hypothetical protein Csa_022325 [Cucumis sativus])

HSP 1 Score: 209.1 bits (531), Expect = 6.5e-50
Identity = 102/128 (79.69%), Postives = 113/128 (88.28%), Query Frame = 0


Query: 155 MKERAIFIPIFLFILYNFQQLLQYKETGQSLRAWWNNQKMGRVNTICAWLFGVRNVVLNF 214
           M+ERAIFIPI LFI+YNFQQLLQYKETGQS+RAWWNNQ+MGR+NTICAWLFGV N VL  
Sbjct: 569 MEERAIFIPISLFIVYNFQQLLQYKETGQSVRAWWNNQRMGRINTICAWLFGVGNAVLKL 628

Query: 215 LGGKETVFEVTKKETCCEVNLGHFTFDESPMYVPGTTIMLLQFIALFMSFIRLERPRSAV 274
           LG +ETVFEVTKKET CEV+LGHFTFDESPM+V GTTI+LLQ IAL  SFIRL R RSAV
Sbjct: 629 LGVRETVFEVTKKETYCEVDLGHFTFDESPMFVTGTTILLLQLIALLTSFIRLGRSRSAV 688

Query: 275 LEVIYDVY 283
           LEVI  ++
Sbjct: 689 LEVICSLW 696

[Close]

BLAST of CSPI02G26260 vs. NCBI nr
Match: XP_038902791.1 (cellulose synthase-like protein H1 isoform X1 [Benincasa hispida])

HSP 1 Score: 198.4 bits (503), Expect = 1.1e-46
Identity = 100/132 (75.76%), Postives = 114/132 (86.36%), Query Frame = 0


Query: 155 MKERAIFIPIFLFILYNFQQLLQYKETGQSLRAWWNNQKMGRVNTICAWLFGVRNVVLNF 214
           ++ERAI IPI LFI+YN QQLLQYKETGQS+RAWWNNQ+MGRVNT+CAWLFGV NVVL  
Sbjct: 572 VEERAILIPISLFIIYNSQQLLQYKETGQSIRAWWNNQRMGRVNTMCAWLFGVWNVVLKL 631

Query: 215 LGGKETVFEVTKKETCCEVNLGHFTFDESPMYVPGTTIMLLQFIALFMSFIR-LERPRSA 274
           LG +ETVFEVTKKET CE +LGHFTFDESPM+VPGTTI+LLQ IAL MSFIR  +R  S+
Sbjct: 632 LGVRETVFEVTKKETGCEADLGHFTFDESPMFVPGTTILLLQLIALLMSFIRPPKRSGSS 691

Query: 275 VLEVIYDVYDML 286
           VLEVI  V+ +L
Sbjct: 692 VLEVICSVWLVL 703

[Close]

BLAST of CSPI02G26260 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 88.6 bits (218), Expect = 1.2e-17
Identity = 58/200 (29.00%), Postives = 93/200 (46.50%), Query Frame = 0


Query: 1   MELGLKLSKHDVSEAFDATIYRSLVGSLMYLTTTRPDIMFLVSLLSRFITSPKRSHCEVG 60
           M+  +  S H   +  DA  YR L+G LMYL  TR DI F V+ LS+F  +P+ +H +  
Sbjct: 358 MDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAV 417

Query: 61  KRVLRYILGTVDHGIHYKRNVDNVLVGYSDSDWGGNIDDFKSTSD-C------------- 120
            ++L YI GTV  G+ Y    +  L  +SD+ +    D  +ST+  C             
Sbjct: 418 MKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSK 477

Query: 121 ----------------------QALWLRNVLHELKCPQEKETIMFCDNQSSISLSKNSVF 162
                                 + +WL     EL+ P  K T++FCDN ++I ++ N+VF
Sbjct: 478 KQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVF 537

[Close]

BLAST of CSPI02G26260 vs. TAIR 10
Match: AT2G32540.1 (cellulose synthase-like B4 )

HSP 1 Score: 72.0 bits (175), Expect = 1.2e-12
Identity = 56/197 (28.43%), Postives = 88/197 (44.67%), Query Frame = 0


Query: 107 QALWLRNVLHELKCPQEKETIMFCDN-QSSISLSKNSVFSWKKQT--------------- 166
           Q  W   +L  L   Q     MFC   +   SL+   VFSW  ++               
Sbjct: 500 QRRWATGLLEILFNKQSPLIGMFCRKIRFRQSLAYLYVFSWGLRSIPELFYCLLPAYCLL 559

Query: 167 HKDQMKERAIFIPIFLFI--LYNFQQLLQYKETGQSLRAWWNNQKMGRVNTICAWLFGVR 226
           H   +  + +++ I + +  ++    L ++   G S+++W+  Q  GR+ T C+WLF V 
Sbjct: 560 HNSALFPKGVYLGIIITLVGIHCLYTLWEFMNLGFSIQSWYVTQSFGRIKTTCSWLFSVL 619

Query: 227 NVVLNFLGGKETVFEVTKK---ET--------------CCEVNLGHFTFDESPMYVPGTT 269
           +V+L  LG  +TVF VTKK   ET              C   + G F FD S  ++PGT 
Sbjct: 620 DVILKLLGISKTVFIVTKKTMPETKSGSGSKKSQREVDCPNQDSGKFEFDGSLYFLPGTF 679

[Close]

BLAST of CSPI02G26260 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 71.6 bits (174), Expect = 1.5e-12
Identity = 34/88 (38.64%), Postives = 56/88 (63.64%), Query Frame = 0


Query: 17  DATIYRSLVGSLMYLTTTRPDIMFLVSLLSRFITSPKRSHCEVGKRVLRYILGTVDHGIH 76
           D + +RS+VG+L YLT TRPDI + V+++ + +  P  +  ++ KRVLRY+ GT+ HG++
Sbjct: 96  DPSDFRSIVGALQYLTLTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLY 155

Query: 77  YKRNVDNVLVGYSDSDWGGNIDDFKSTS 105
             +N    +  + DSDW G     +ST+
Sbjct: 156 IHKNSKLNVQAFCDSDWAGCTSTRRSTT 183

[Close]

BLAST of CSPI02G26260 vs. TAIR 10
Match: AT2G32530.1 (cellulose synthase-like B3 )

HSP 1 Score: 67.0 bits (162), Expect = 3.7e-11
Identity = 39/127 (30.71%), Postives = 63/127 (49.61%), Query Frame = 0


Query: 162 IPIFLFILYNFQQLLQYKETGQSLRAWWNNQKMGRVNTICAWLFGVRNVVLNFLGGKETV 221
           I + L  ++    L ++   G S+++W+ +Q   R+ T C+WLF + +++L  LG  +TV
Sbjct: 573 IVVTLVGMHCLYSLWEFMSLGFSVQSWFASQSFWRIKTTCSWLFSIPDIILKLLGISKTV 632

Query: 222 FEVTKKE-----------------TCCEVNLGHFTFDESPMYVPGTTIMLLQFIALFMSF 272
           F VTKK                   C   + G F FD S  ++PGT I+L+   AL    
Sbjct: 633 FIVTKKTMPKTMSGSGSEKSQREVDCPNQDSGKFEFDGSLYFLPGTFILLVNLAALAGCS 692

[Close]

BLAST of CSPI02G26260 vs. TAIR 10
Match: AT4G15290.1 (Cellulose synthase family protein )

HSP 1 Score: 63.9 bits (154), Expect = 3.2e-10
Identity = 34/112 (30.36%), Postives = 58/112 (51.79%), Query Frame = 0


Query: 175 LLQYKETGQSLRAWWNNQKMGRVNTICAWLFGVRNVVLNFLGGKETVFEVTKK------- 234
           L Q+   G S+++W+  Q + R+    +WLF +++++L  LG  +  F + KK       
Sbjct: 584 LWQFMSLGFSVQSWYVVQSLWRIIATSSWLFSIQDIILKLLGISQIGFVIAKKTIPETKS 643

Query: 235 ----------ETCCEVNLGHFTFDESPMYVPGTTIMLLQFIALFMSFIRLER 270
                     +   ++NLG F FD S +++PGT IML+   AL    +RL+R
Sbjct: 644 VYESKPSQGEDDVPKLNLGKFEFDSSGLFIPGTFIMLVNLAALAGYLVRLQR 695

The following BLAST results are available for this feature:

BLAST of CSPI02G26260 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94HW2	8.9e-18	46.46	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
Q9ZT94	1.2e-17	46.46	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
Q7XUU0	4.4e-17	38.33	Putative cellulose synthase-like protein H3 OS=Oryza sativa subsp. japonica OX=3...	[more]
Q339N5	9.9e-17	39.17	Cellulose synthase-like protein H1 OS=Oryza sativa subsp. japonica OX=39947 GN=C...	[more]
Q7PC71	1.1e-15	34.65	Cellulose synthase-like protein H2 OS=Oryza sativa subsp. indica OX=39946 GN=CSL...	[more]

BLAST of CSPI02G26260 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C389	1.5e-52	80.15	cellulose synthase-like protein H1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
A0A1S4E0S9	4.4e-52	79.39	cellulose synthase-like protein H2 OS=Cucumis melo OX=3656 GN=LOC107991432 PE=4 ...	[more]
A0A0A0LQD3	3.2e-50	79.69	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G416240 PE=4 SV=1	[more]
A0A1S3C244	5.2e-45	71.97	cellulose synthase-like protein H2 OS=Cucumis melo OX=3656 GN=LOC103495982 PE=4 ...	[more]
A0A5A7V774	1.5e-44	54.44	Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold616G001160 PE=...	[more]

BLAST of CSPI02G26260 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004151937.3	1.4e-63	93.13	cellulose synthase-like protein H1 [Cucumis sativus] >KGN63423.2 hypothetical pr...	[more]
XP_008455906.1	3.1e-52	80.15	PREDICTED: cellulose synthase-like protein H1 isoform X1 [Cucumis melo]	[more]
XP_016901847.1	9.1e-52	79.39	PREDICTED: cellulose synthase-like protein H2 [Cucumis melo]	[more]
XP_004151897.1	6.5e-50	79.69	cellulose synthase-like protein H1 [Cucumis sativus] >KGN63234.1 hypothetical pr...	[more]
XP_038902791.1	1.1e-46	75.76	cellulose synthase-like protein H1 isoform X1 [Benincasa hispida]	[more]

BLAST of CSPI02G26260 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	1.2e-17	29.00	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
AT2G32540.1	1.2e-12	28.43	cellulose synthase-like B4	[more]
ATMG00810.1	1.5e-12	38.64	DNA/RNA polymerases superfamily protein	[more]
AT2G32530.1	3.7e-11	30.71	cellulose synthase-like B3	[more]
AT4G15290.1	3.2e-10	30.36	Cellulose synthase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005150	Cellulose synthase	PFAM	PF03552	Cellulose_synt	coord: 160..265 e-value: 4.1E-7 score: 28.9
None	No IPR available	PANTHER	PTHR13301	X-BOX TRANSCRIPTION FACTOR-RELATED	coord: 155..285
None	No IPR available	PANTHER	PTHR13301:SF53	CELLULOSE SYNTHASE-LIKE PROTEIN B1-RELATED	coord: 155..285
None	No IPR available	CDD	cd09272	RNase_HI_RT_Ty1	coord: 86..147 e-value: 1.13716E-19 score: 82.5161

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI02G26260.1	CSPI02G26260.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030244	cellulose biosynthetic process
biological_process	GO:0097502	mannosylation
biological_process	GO:0009833	plant-type primary cell wall biogenesis
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0016760	cellulose synthase (UDP-forming) activity
molecular_function	GO:0051753	mannan synthase activity