CSPI02G26080 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI02G26080
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	LOB domain-containing protein 2
Location	Chr2: 22146405 .. 22147214 (-)
RNA-Seq Expression	CSPI02G26080
Synteny	CSPI02G26080

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CTATGCATATTCATATATGCTTCTTTCCCCAACAACAAGAACACCAAATTTTCATCTTTGTTTCTTTTTCTCTCAAAGATGCAAAAGCACAATAACGGAGTTTTGCAGGGAACGCCCGCTTGTGCAGCCTGCAAACACCAGAGGAAGAAATGCCACGAGACGTGTCCGTTGGCACCTTACTTTCCTGCAGAACGGAACAGGGAATTCCAAGCCGTTCACAAGGTGTTTGGAGTGAGCAATGTGACCAAAATGGTGAAAAACGTGAGAGAAGAAGACAAGAGAAAGGCTGTGGATTCTTTGATTTGGGAAGCTGTTTGTAGGCAAAACGACCCCGTTTTAGGGCCCTATGGTGAATACAAAAGGGTTTTGGAAGAGGTAAAAGTGTGTAAATTATTGACTCAAAACCAAAGCATTATGAATGGAGGGCAAGTGGGATTGGGTTATAAACCAATAATACCATGTTTGGGAGCGTGGAACAATAATAATAGTAATGATAATAATAATAATAATAATAATAATAATAATAATAGTAGTAGTAATAATGGAAATGGAAATGGTAATTTGATTAATAATGGAAATGGGATTATGGGGATAATCAATGGAGGAGTTAATAGCAGTCATTTACTTAATTACTTTCATGATAATTATGTAAGTGCTATAGTTGATTCAAGTCCTTACAGCAATTCTTCCGCTTATAATTTACAAAGTCATGAGAAATTGATGAGATTGCAACAAGATAAAGAGATTAGTTCAAACATGGTTGTGCCACTTCAGCAGCAGCAGCATCCAACCTTTCACCATTGTTTTTAA

mRNA sequence

CTATGCATATTCATATATGCTTCTTTCCCCAACAACAAGAACACCAAATTTTCATCTTTGTTTCTTTTTCTCTCAAAGATGCAAAAGCACAATAACGGAGTTTTGCAGGGAACGCCCGCTTGTGCAGCCTGCAAACACCAGAGGAAGAAATGCCACGAGACGTGTCCGTTGGCACCTTACTTTCCTGCAGAACGGAACAGGGAATTCCAAGCCGTTCACAAGGTGTTTGGAGTGAGCAATGTGACCAAAATGGTGAAAAACGTGAGAGAAGAAGACAAGAGAAAGGCTGTGGATTCTTTGATTTGGGAAGCTGTTTGTAGGCAAAACGACCCCGTTTTAGGGCCCTATGGTGAATACAAAAGGGTTTTGGAAGAGGTAAAAGTGTGTAAATTATTGACTCAAAACCAAAGCATTATGAATGGAGGGCAAGTGGGATTGGGTTATAAACCAATAATACCATGTTTGGGAGCGTGGAACAATAATAATAGTAATGATAATAATAATAATAATAATAATAATAATAATAATAGTAGTAGTAATAATGGAAATGGAAATGGTAATTTGATTAATAATGGAAATGGGATTATGGGGATAATCAATGGAGGAGTTAATAGCAGTCATTTACTTAATTACTTTCATGATAATTATGTAAGTGCTATAGTTGATTCAAGTCCTTACAGCAATTCTTCCGCTTATAATTTACAAAGTCATGAGAAATTGATGAGATTGCAACAAGATAAAGAGATTAGTTCAAACATGGTTGTGCCACTTCAGCAGCAGCAGCATCCAACCTTTCACCATTGTTTTTAA

Coding sequence (CDS)

ATGCAAAAGCACAATAACGGAGTTTTGCAGGGAACGCCCGCTTGTGCAGCCTGCAAACACCAGAGGAAGAAATGCCACGAGACGTGTCCGTTGGCACCTTACTTTCCTGCAGAACGGAACAGGGAATTCCAAGCCGTTCACAAGGTGTTTGGAGTGAGCAATGTGACCAAAATGGTGAAAAACGTGAGAGAAGAAGACAAGAGAAAGGCTGTGGATTCTTTGATTTGGGAAGCTGTTTGTAGGCAAAACGACCCCGTTTTAGGGCCCTATGGTGAATACAAAAGGGTTTTGGAAGAGGTAAAAGTGTGTAAATTATTGACTCAAAACCAAAGCATTATGAATGGAGGGCAAGTGGGATTGGGTTATAAACCAATAATACCATGTTTGGGAGCGTGGAACAATAATAATAGTAATGATAATAATAATAATAATAATAATAATAATAATAATAGTAGTAGTAATAATGGAAATGGAAATGGTAATTTGATTAATAATGGAAATGGGATTATGGGGATAATCAATGGAGGAGTTAATAGCAGTCATTTACTTAATTACTTTCATGATAATTATGTAAGTGCTATAGTTGATTCAAGTCCTTACAGCAATTCTTCCGCTTATAATTTACAAAGTCATGAGAAATTGATGAGATTGCAACAAGATAAAGAGATTAGTTCAAACATGGTTGTGCCACTTCAGCAGCAGCAGCATCCAACCTTTCACCATTGTTTTTAA

Protein sequence

MQKHNNGVLQGTPACAACKHQRKKCHETCPLAPYFPAERNREFQAVHKVFGVSNVTKMVKNVREEDKRKAVDSLIWEAVCRQNDPVLGPYGEYKRVLEEVKVCKLLTQNQSIMNGGQVGLGYKPIIPCLGAWNNNNSNDNNNNNNNNNNNSSSNNGNGNGNLINNGNGIMGIINGGVNSSHLLNYFHDNYVSAIVDSSPYSNSSAYNLQSHEKLMRLQQDKEISSNMVVPLQQQQHPTFHHCF*

Homology

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BLAST of CSPI02G26080 vs. ExPASy Swiss-Prot
Match: Q9LNB9 (LOB domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=LBD2 PE=2 SV=2)

HSP 1 Score: 138.3 bits (347), Expect = 1.2e-31
Identity = 88/170 (51.76%), Postives = 114/170 (67.06%), Query Frame = 0


Query: 14  ACAACKHQRKKCHETCPLAPYFPAERNREFQAVHKVFGVSNVTKMVKNVREEDKRKAVDS 73
           ACA+CKHQRKKC+  C L+PYFPA + +EFQAVHKVFGVSNV KMV+ VREED+ K  DS
Sbjct: 24  ACASCKHQRKKCNNECILSPYFPARKTKEFQAVHKVFGVSNVQKMVRTVREEDRTKLSDS 83

Query: 74  LIWEAVCRQNDPVLGPYGEYKRVLEEVKVCKLLTQNQSIMNGGQVGLGYKPIIPCLGAWN 133
           L WEA+ RQ DPVLG YGEY+R+ EE+K+ K L  NQ                P +G W+
Sbjct: 84  LTWEALWRQKDPVLGSYGEYRRICEELKLYKSLVHNQ----------------PLIG-WD 143

Query: 134 NNNSNDNNNNNNNNNNNSSSNNGNGNGNLINNGNGI-MGIINGGVNSSHL 183
           NN    NNN+NN N    ++++G+G  ++ NNG G+   I+NGG  S ++
Sbjct: 144 NNQRVFNNNSNNKNGLAMTNSSGSGGFSVNNNGVGVNREIVNGGYASRNV 176

[Close]

BLAST of CSPI02G26080 vs. ExPASy Swiss-Prot
Match: Q9LRW1 (LOB domain-containing protein 22 OS=Arabidopsis thaliana OX=3702 GN=LBD22 PE=2 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 8.8e-19
Identity = 44/98 (44.90%), Postives = 69/98 (70.41%), Query Frame = 0


Query: 4   HNNGVLQGTPACAACKHQRKKCHETCPLAPYFPAERNREFQAVHKVFGVSNVTKMVKNVR 63
           +NN   Q   ACAACK+QR+KC   C LAPYFP +R+R+F   HK+FGVSN+TK++K++ 
Sbjct: 29  NNNSTNQ---ACAACKYQRRKCAPDCLLAPYFPHDRHRQFLNAHKLFGVSNITKIIKSLT 88

Query: 64  EEDKRKAVDSLIWEAVCRQNDPVLGPYGEYKRVLEEVK 102
             +K  A+ ++++++  R NDPV G YG  K++  +++
Sbjct: 89  PPEKDAAMHTIMFQSDARANDPVDGCYGIIKKLQYQIE 123

[Close]

BLAST of CSPI02G26080 vs. ExPASy Swiss-Prot
Match: Q9SSM9 (LOB domain-containing protein 7 OS=Arabidopsis thaliana OX=3702 GN=LBD7 PE=2 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 7.4e-18
Identity = 47/113 (41.59%), Postives = 64/113 (56.64%), Query Frame = 0


Query: 12  TPACAACKHQRKKCHETCPLAPYFPAERNREFQAVHKVFGVSNVTKMVKNVREEDKRKAV 71
           T ACAACKHQRKKC + C LA YFP +   +F   HK+FGVSN+TKM+K + E  +  A+
Sbjct: 11  TTACAACKHQRKKCKKNCILARYFPQDGTNKFLNAHKLFGVSNITKMLKRIEESQRDIAM 70

Query: 72  DSLIWEAVCRQNDPVLGPY--------------GEYKRVLEEVKVCKLLTQNQ 111
           ++LI+ A  R  DPV G Y               E     +++ +C+ L Q Q
Sbjct: 71  ENLIYHANARALDPVGGVYRTICDLKCKIEFVQTELNLTRQQIDMCRSLAQEQ 123

[Close]

BLAST of CSPI02G26080 vs. ExPASy Swiss-Prot
Match: Q9SCS4 (LOB domain-containing protein 28 OS=Arabidopsis thaliana OX=3702 GN=LBD28 PE=2 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 2.4e-16
Identity = 39/87 (44.83%), Postives = 56/87 (64.37%), Query Frame = 0


Query: 15  CAACKHQRKKCHETCPLAPYFPAERNREFQAVHKVFGVSNVTKMVKNVREEDKRKAVDSL 74
           CAACKH R+KC E C  APYFP+ +   ++AVHKVFG S+V  ++ ++    +  A+D+L
Sbjct: 13  CAACKHLRRKCTEDCVFAPYFPSTKLDNYEAVHKVFGASHVATLINSLHPCQREFAMDTL 72

Query: 75  IWEAVCRQNDPVLGPYGEYKRVLEEVK 102
            WEA  + NDPV G  G    +L ++K
Sbjct: 73  AWEAQVQANDPVNGCLGIIYNLLSQIK 99

[Close]

BLAST of CSPI02G26080 vs. ExPASy Swiss-Prot
Match: Q8LBW3 (LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 SV=2)

HSP 1 Score: 69.3 bits (168), Expect = 6.7e-11
Identity = 56/163 (34.36%), Postives = 84/163 (51.53%), Query Frame = 0


Query: 11  GTPACAACKHQRKKCHETCPLAPYFPAERNREFQAVHKVFGVSNVTKMVKNVREEDKRKA 70
           G+  CA+CK  R++C + C  APYFP +   +F  VHKVFG SNV+KM++ +    +  A
Sbjct: 5   GSSPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADA 64

Query: 71  VDSLIWEAVCRQNDPVLGPYG------------EYKRVLEEVKVCKLLTQNQSIMNGGQV 130
           V+SL++EA  R  DPV G  G            + +  + + ++  +  QN+  +     
Sbjct: 65  VNSLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQNEPTLQSHHQ 124

Query: 131 GLGYKPIIPCLGAWNNNNSNDNNNNNNNNNNNSSSNNGNGNGN 162
            L        L   NNNN N+ N NNNNNN   + ++G  N N
Sbjct: 125 VLELDQDHKAL-LLNNNNINNCNTNNNNNNFGYAMSSGQFNSN 166

[Close]

BLAST of CSPI02G26080 vs. ExPASy TrEMBL
Match: A0A5D3CE97 (LOB domain-containing protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold757G00180 PE=3 SV=1)

HSP 1 Score: 423.3 bits (1087), Expect = 6.8e-115
Identity = 216/246 (87.80%), Postives = 227/246 (92.28%), Query Frame = 0


Query: 1   MQKHNNGVLQGTPACAACKHQRKKCHETCPLAPYFPAERNREFQAVHKVFGVSNVTKMVK 60
           MQ+HNNG+LQ TPACAACKHQRKKCHETCPLAPYFPA+RNREFQAVHKVFGVSNVTKMVK
Sbjct: 1   MQRHNNGLLQATPACAACKHQRKKCHETCPLAPYFPADRNREFQAVHKVFGVSNVTKMVK 60

Query: 61  NVREEDKRKAVDSLIWEAVCRQNDPVLGPYGEYKRVLEEVKVCKLLTQNQSIMNGGQVGL 120
           NVREEDKRKAVDSLIWEAVCRQNDPVLGPYGEYKRVLEEVKVCKLLTQNQSIMNGGQVGL
Sbjct: 61  NVREEDKRKAVDSLIWEAVCRQNDPVLGPYGEYKRVLEEVKVCKLLTQNQSIMNGGQVGL 120

Query: 121 GYKPIIPCLGAWNNNNSNDNNNNNNNNNNNSSSNNGNGNGNLINNGNGIMGIINGGVNSS 180
           GYKPI+PCLG WNNNN+N++NNN NNNNNN        NGNLINNGNGIMGIINGGVNS+
Sbjct: 121 GYKPIMPCLGPWNNNNNNNSNNNTNNNNNN--------NGNLINNGNGIMGIINGGVNSN 180

Query: 181 HLLNYFHDNYVSAIVDSSPYSNSSAYNLQSHEKLMRLQQDKEISSNMVVPL---QQQQHP 240
           HL NY HDNYVSAI+DSSPYSNSS YNLQS EKLMRLQQDKEI+S+MV PL   QQQQHP
Sbjct: 181 HLFNYLHDNYVSAIIDSSPYSNSSTYNLQSPEKLMRLQQDKEITSSMVGPLQQQQQQQHP 238

Query: 241 TFHHCF 244
           TFHHCF
Sbjct: 241 TFHHCF 238

[Close]

BLAST of CSPI02G26080 vs. ExPASy TrEMBL
Match: A0A1S4E1K1 (LOB domain-containing protein 2 OS=Cucumis melo OX=3656 GN=LOC103495999 PE=3 SV=1)

HSP 1 Score: 423.3 bits (1087), Expect = 6.8e-115
Identity = 216/246 (87.80%), Postives = 227/246 (92.28%), Query Frame = 0


Query: 1   MQKHNNGVLQGTPACAACKHQRKKCHETCPLAPYFPAERNREFQAVHKVFGVSNVTKMVK 60
           MQ+HNNG+LQ TPACAACKHQRKKCHETCPLAPYFPA+RNREFQAVHKVFGVSNVTKMVK
Sbjct: 1   MQRHNNGLLQATPACAACKHQRKKCHETCPLAPYFPADRNREFQAVHKVFGVSNVTKMVK 60

Query: 61  NVREEDKRKAVDSLIWEAVCRQNDPVLGPYGEYKRVLEEVKVCKLLTQNQSIMNGGQVGL 120
           NVREEDKRKAVDSLIWEAVCRQNDPVLGPYGEYKRVLEEVKVCKLLTQNQSIMNGGQVGL
Sbjct: 61  NVREEDKRKAVDSLIWEAVCRQNDPVLGPYGEYKRVLEEVKVCKLLTQNQSIMNGGQVGL 120

Query: 121 GYKPIIPCLGAWNNNNSNDNNNNNNNNNNNSSSNNGNGNGNLINNGNGIMGIINGGVNSS 180
           GYKPI+PCLG WNNNN+N++NNN NNNNNN        NGNLINNGNGIMGIINGGVNS+
Sbjct: 121 GYKPIMPCLGPWNNNNNNNSNNNTNNNNNN--------NGNLINNGNGIMGIINGGVNSN 180

Query: 181 HLLNYFHDNYVSAIVDSSPYSNSSAYNLQSHEKLMRLQQDKEISSNMVVPL---QQQQHP 240
           HL NY HDNYVSAI+DSSPYSNSS YNLQS EKLMRLQQDKEI+S+MV PL   QQQQHP
Sbjct: 181 HLFNYLHDNYVSAIIDSSPYSNSSTYNLQSPEKLMRLQQDKEITSSMVGPLQQQQQQQHP 238

Query: 241 TFHHCF 244
           TFHHCF
Sbjct: 241 TFHHCF 238

[Close]

BLAST of CSPI02G26080 vs. ExPASy TrEMBL
Match: A0A6J1CHJ9 (LOB domain-containing protein 2 OS=Momordica charantia OX=3673 GN=LOC111011230 PE=3 SV=1)

HSP 1 Score: 330.1 bits (845), Expect = 7.8e-87
Identity = 175/248 (70.56%), Postives = 193/248 (77.82%), Query Frame = 0


Query: 1   MQKHNNGVLQGTPACAACKHQRKKCHETCPLAPYFPAERNREFQAVHKVFGVSNVTKMVK 60
           MQ+HNN  LQ   ACAACKHQRKKCH+TCPLAPYFPA+RNREFQAVHKVFGVSNVTKMVK
Sbjct: 1   MQRHNNAALQPAAACAACKHQRKKCHDTCPLAPYFPADRNREFQAVHKVFGVSNVTKMVK 60

Query: 61  NVREEDKRKAVDSLIWEAVCRQNDPVLGPYGEYKRVLEEVKVCKLLTQNQSIMNGGQVGL 120
           NVREED+RKAVDSLIWEAVCRQNDPVLGPYGEY+RVLEE+KVCKLL+QNQS   G     
Sbjct: 61  NVREEDRRKAVDSLIWEAVCRQNDPVLGPYGEYRRVLEELKVCKLLSQNQS--QGQNPFA 120

Query: 121 GYKPIIPCLGAWNNNNSNDNNNNNNNNNNNSSSNNGNGNGNLINNGNGIMGI-INGGVNS 180
           GYKPI+PC G WNN  ++ N                       NNGNGIMGI INGGVNS
Sbjct: 121 GYKPIMPCFGGWNNGTNSTN-----------------------NNGNGIMGININGGVNS 180

Query: 181 SHLLNYFHDNYVSAIVDSSPYSNSSAYNLQSHEKLMRLQQDKEISSNMVVPL----QQQQ 240
           S+L NY HDN +SAI+DSS YSNSS YNLQS EKL+RLQQDKEI+S++VVPL    QQQQ
Sbjct: 181 SNLFNYLHDN-LSAIIDSSHYSNSSTYNLQSPEKLIRLQQDKEITSSVVVPLQQQVQQQQ 222

Query: 241 HPTFHHCF 244
           HP FH  +
Sbjct: 241 HPNFHQLY 222

[Close]

BLAST of CSPI02G26080 vs. ExPASy TrEMBL
Match: A0A6J1G604 (LOB domain-containing protein 2 OS=Cucurbita moschata OX=3662 GN=LOC111451117 PE=3 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 3.2e-80
Identity = 168/258 (65.12%), Postives = 185/258 (71.71%), Query Frame = 0


Query: 1   MQKHNNGVLQGTPACAACKHQRKKCHETCPLAPYFPAERNREFQAVHKVFGVSNVTKMVK 60
           MQ+HN G LQ  PACAACKHQRKKCHETCPLAPYFPA++NREFQAVHKVFGVSNVTKMVK
Sbjct: 1   MQRHNLGALQPAPACAACKHQRKKCHETCPLAPYFPADQNREFQAVHKVFGVSNVTKMVK 60

Query: 61  NVREEDKRKAVDSLIWEAVCRQNDPVLGPYGEYKRVLEEVKVCKLLTQNQSIMNG---GQ 120
           NVREED+RKAV+SL+WEAVCRQNDPVLGP+GEYKRVLEE+KVCK + QNQS  +    GQ
Sbjct: 61  NVREEDRRKAVESLVWEAVCRQNDPVLGPFGEYKRVLEELKVCK-MGQNQSQSSNPFVGQ 120

Query: 121 VGLGYKPIIPCLGAWNNNNSNDNNNNNNNNNNNSSSNNGNGNGNLINNGNGIMGIINGGV 180
           VGL      PC G                             G + NNGNGI+G+INGGV
Sbjct: 121 VGL------PCFG-----------------------------GTISNNGNGIVGLINGGV 180

Query: 181 NSSHLLNYFHDNYVSAIVDSSPYSNSSAYNLQSHEKLMRLQQD-KEISSNMVVPL----- 240
           N SHL NY HDN +SAI+DSSPY+NSS YNLQS EKLMRL QD KEISS +VVP      
Sbjct: 181 NGSHLFNYLHDN-LSAIIDSSPYTNSSTYNLQSPEKLMRLHQDHKEISSTIVVPFQPPPP 221

Query: 241 ------QQQQHPTFHHCF 244
                 Q QQHP FHHCF
Sbjct: 241 PQQQQHQHQQHPNFHHCF 221

[Close]

BLAST of CSPI02G26080 vs. ExPASy TrEMBL
Match: A0A6J1I7L7 (LOB domain-containing protein 2 OS=Cucurbita maxima OX=3661 GN=LOC111469870 PE=3 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 4.2e-80
Identity = 168/256 (65.62%), Postives = 185/256 (72.27%), Query Frame = 0


Query: 1   MQKHNNGVLQGTPACAACKHQRKKCHETCPLAPYFPAERNREFQAVHKVFGVSNVTKMVK 60
           MQ+HN G LQ  PACAACKHQRKKCHETCPLAPYFPA++NREFQAVHKVFGVSNVTKMVK
Sbjct: 1   MQRHNLGALQPAPACAACKHQRKKCHETCPLAPYFPADQNREFQAVHKVFGVSNVTKMVK 60

Query: 61  NVREEDKRKAVDSLIWEAVCRQNDPVLGPYGEYKRVLEEVKVCKLLTQNQSIMNG---GQ 120
           NVREED+RKAV+SL+WEAVCRQNDPVLGP+GEYKRVLEE+KVCK + QNQS  +    GQ
Sbjct: 61  NVREEDRRKAVESLVWEAVCRQNDPVLGPFGEYKRVLEELKVCK-MGQNQSQSSNPFVGQ 120

Query: 121 VGLGYKPIIPCLGAWNNNNSNDNNNNNNNNNNNSSSNNGNGNGNLINNGNGIMGIINGGV 180
           VGL      PC G                             G++ NNGNGIMG+INGGV
Sbjct: 121 VGL------PCFG-----------------------------GSISNNGNGIMGLINGGV 180

Query: 181 NSSHLLNYFHDNYVSAIVDSSPYSNSSAYNLQSHEKLMRLQQD-KEISSNMVVPL----- 240
           N SHL NY HDN +SAI+DSSPY+NSS YNLQS EKLMRL QD KEISS +VVP      
Sbjct: 181 NGSHLFNYLHDN-LSAIIDSSPYTNSSTYNLQSPEKLMRLHQDHKEISSTIVVPFQPPPP 219

Query: 241 ----QQQQHPTFHHCF 244
               Q QQH  FHHCF
Sbjct: 241 QQQQQHQQHSNFHHCF 219

[Close]

BLAST of CSPI02G26080 vs. NCBI nr
Match: XP_031737200.1 (LOB domain-containing protein 2 [Cucumis sativus] >KAE8652276.1 hypothetical protein Csa_022532 [Cucumis sativus])

HSP 1 Score: 456.1 bits (1172), Expect = 2.0e-124
Identity = 231/243 (95.06%), Postives = 235/243 (96.71%), Query Frame = 0


Query: 1   MQKHNNGVLQGTPACAACKHQRKKCHETCPLAPYFPAERNREFQAVHKVFGVSNVTKMVK 60
           MQKHNNGVLQGTPACAACKHQRKKCHETCPLAPYFPAERNREFQAVHKVFGVSNVTKMVK
Sbjct: 1   MQKHNNGVLQGTPACAACKHQRKKCHETCPLAPYFPAERNREFQAVHKVFGVSNVTKMVK 60

Query: 61  NVREEDKRKAVDSLIWEAVCRQNDPVLGPYGEYKRVLEEVKVCKLLTQNQSIMNGGQVGL 120
           NVREEDKRKAVDSLIWEAVCRQNDPVLGPYGEYKRVLEEVKVCKLLTQNQSIMNGGQVGL
Sbjct: 61  NVREEDKRKAVDSLIWEAVCRQNDPVLGPYGEYKRVLEEVKVCKLLTQNQSIMNGGQVGL 120

Query: 121 GYKPIIPCLGAWNNNNSNDNNNNNNNNNNNSSSNNGNGNGNLINNGNGIMGIINGGVNSS 180
           GYKPIIPCLGAWNNNN+N++N+NNN        NNGNGNGNLINNGNGIMGIINGGVNSS
Sbjct: 121 GYKPIIPCLGAWNNNNNNNSNDNNN--------NNGNGNGNLINNGNGIMGIINGGVNSS 180

Query: 181 HLLNYFHDNYVSAIVDSSPYSNSSAYNLQSHEKLMRLQQDKEISSNMVVPLQQQQHPTFH 240
           HLLNYFHDNYVSAIVDSSPYSNSSAYNLQSHEKLMRLQQDKEISSNMVVPLQQQQHPTFH
Sbjct: 181 HLLNYFHDNYVSAIVDSSPYSNSSAYNLQSHEKLMRLQQDKEISSNMVVPLQQQQHPTFH 235

Query: 241 HCF 244
           HCF
Sbjct: 241 HCF 235

[Close]

BLAST of CSPI02G26080 vs. NCBI nr
Match: XP_016901865.1 (PREDICTED: LOB domain-containing protein 2 [Cucumis melo] >TYK09538.1 LOB domain-containing protein 2 [Cucumis melo var. makuwa])

HSP 1 Score: 423.3 bits (1087), Expect = 1.4e-114
Identity = 216/246 (87.80%), Postives = 227/246 (92.28%), Query Frame = 0


Query: 1   MQKHNNGVLQGTPACAACKHQRKKCHETCPLAPYFPAERNREFQAVHKVFGVSNVTKMVK 60
           MQ+HNNG+LQ TPACAACKHQRKKCHETCPLAPYFPA+RNREFQAVHKVFGVSNVTKMVK
Sbjct: 1   MQRHNNGLLQATPACAACKHQRKKCHETCPLAPYFPADRNREFQAVHKVFGVSNVTKMVK 60

Query: 61  NVREEDKRKAVDSLIWEAVCRQNDPVLGPYGEYKRVLEEVKVCKLLTQNQSIMNGGQVGL 120
           NVREEDKRKAVDSLIWEAVCRQNDPVLGPYGEYKRVLEEVKVCKLLTQNQSIMNGGQVGL
Sbjct: 61  NVREEDKRKAVDSLIWEAVCRQNDPVLGPYGEYKRVLEEVKVCKLLTQNQSIMNGGQVGL 120

Query: 121 GYKPIIPCLGAWNNNNSNDNNNNNNNNNNNSSSNNGNGNGNLINNGNGIMGIINGGVNSS 180
           GYKPI+PCLG WNNNN+N++NNN NNNNNN        NGNLINNGNGIMGIINGGVNS+
Sbjct: 121 GYKPIMPCLGPWNNNNNNNSNNNTNNNNNN--------NGNLINNGNGIMGIINGGVNSN 180

Query: 181 HLLNYFHDNYVSAIVDSSPYSNSSAYNLQSHEKLMRLQQDKEISSNMVVPL---QQQQHP 240
           HL NY HDNYVSAI+DSSPYSNSS YNLQS EKLMRLQQDKEI+S+MV PL   QQQQHP
Sbjct: 181 HLFNYLHDNYVSAIIDSSPYSNSSTYNLQSPEKLMRLQQDKEITSSMVGPLQQQQQQQHP 238

Query: 241 TFHHCF 244
           TFHHCF
Sbjct: 241 TFHHCF 238

[Close]

BLAST of CSPI02G26080 vs. NCBI nr
Match: XP_038900978.1 (LOB domain-containing protein 2 [Benincasa hispida])

HSP 1 Score: 404.1 bits (1037), Expect = 8.8e-109
Identity = 209/246 (84.96%), Postives = 219/246 (89.02%), Query Frame = 0


Query: 1   MQKHNNGVLQGTPACAACKHQRKKCHETCPLAPYFPAERNREFQAVHKVFGVSNVTKMVK 60
           MQ+HNNGVLQ TPACAACKHQRKKCHETCPLAPYFPA RNREFQAVHKVFGVSNVTKMVK
Sbjct: 1   MQRHNNGVLQVTPACAACKHQRKKCHETCPLAPYFPANRNREFQAVHKVFGVSNVTKMVK 60

Query: 61  NVREEDKRKAVDSLIWEAVCRQNDPVLGPYGEYKRVLEEVKVCKLLTQNQSIMNGGQVGL 120
           NVREEDKRKAVDSL+WEAVCRQNDPVLGPYGEYKRVLEE+KVCKLLTQNQSIMNGGQV L
Sbjct: 61  NVREEDKRKAVDSLVWEAVCRQNDPVLGPYGEYKRVLEELKVCKLLTQNQSIMNGGQVEL 120

Query: 121 GYKPIIPCLGAWNNNNSNDNNNNNNNNNNNSSSNNGNGNGNLINNGNGIMGIINGGVNSS 180
           GYKPI+PCLG WN      NNNNN N NNN+S        NLINNGNGIMGIINGGVNS+
Sbjct: 121 GYKPIMPCLGGWN------NNNNNKNINNNASE-------NLINNGNGIMGIINGGVNSN 180

Query: 181 HLLNYFHDNYVSAIVDSSPYSNSSAYNLQSHEKLMRLQQDKEISSNMVVPL---QQQQHP 240
           HL +Y HDNYVSAI+DSSPYSNSS YNLQS EKLMRLQQDKEISS++VVPL   QQQQHP
Sbjct: 181 HLFSYLHDNYVSAIIDSSPYSNSSTYNLQSPEKLMRLQQDKEISSSIVVPLQQQQQQQHP 233

Query: 241 TFHHCF 244
           TFHHCF
Sbjct: 241 TFHHCF 233

[Close]

BLAST of CSPI02G26080 vs. NCBI nr
Match: XP_022140622.1 (LOB domain-containing protein 2 [Momordica charantia])

HSP 1 Score: 330.1 bits (845), Expect = 1.6e-86
Identity = 175/248 (70.56%), Postives = 193/248 (77.82%), Query Frame = 0


Query: 1   MQKHNNGVLQGTPACAACKHQRKKCHETCPLAPYFPAERNREFQAVHKVFGVSNVTKMVK 60
           MQ+HNN  LQ   ACAACKHQRKKCH+TCPLAPYFPA+RNREFQAVHKVFGVSNVTKMVK
Sbjct: 1   MQRHNNAALQPAAACAACKHQRKKCHDTCPLAPYFPADRNREFQAVHKVFGVSNVTKMVK 60

Query: 61  NVREEDKRKAVDSLIWEAVCRQNDPVLGPYGEYKRVLEEVKVCKLLTQNQSIMNGGQVGL 120
           NVREED+RKAVDSLIWEAVCRQNDPVLGPYGEY+RVLEE+KVCKLL+QNQS   G     
Sbjct: 61  NVREEDRRKAVDSLIWEAVCRQNDPVLGPYGEYRRVLEELKVCKLLSQNQS--QGQNPFA 120

Query: 121 GYKPIIPCLGAWNNNNSNDNNNNNNNNNNNSSSNNGNGNGNLINNGNGIMGI-INGGVNS 180
           GYKPI+PC G WNN  ++ N                       NNGNGIMGI INGGVNS
Sbjct: 121 GYKPIMPCFGGWNNGTNSTN-----------------------NNGNGIMGININGGVNS 180

Query: 181 SHLLNYFHDNYVSAIVDSSPYSNSSAYNLQSHEKLMRLQQDKEISSNMVVPL----QQQQ 240
           S+L NY HDN +SAI+DSS YSNSS YNLQS EKL+RLQQDKEI+S++VVPL    QQQQ
Sbjct: 181 SNLFNYLHDN-LSAIIDSSHYSNSSTYNLQSPEKLIRLQQDKEITSSVVVPLQQQVQQQQ 222

Query: 241 HPTFHHCF 244
           HP FH  +
Sbjct: 241 HPNFHQLY 222

[Close]

BLAST of CSPI02G26080 vs. NCBI nr
Match: XP_023533791.1 (LOB domain-containing protein 2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 310.1 bits (793), Expect = 1.7e-80
Identity = 169/260 (65.00%), Postives = 187/260 (71.92%), Query Frame = 0


Query: 1   MQKHNNGVLQGTPACAACKHQRKKCHETCPLAPYFPAERNREFQAVHKVFGVSNVTKMVK 60
           MQ+HN G LQ  PACAACKHQRKKCHETCPLAPYFPA++NREFQAVHKVFGVSNVTKMVK
Sbjct: 1   MQRHNLGALQPAPACAACKHQRKKCHETCPLAPYFPADQNREFQAVHKVFGVSNVTKMVK 60

Query: 61  NVREEDKRKAVDSLIWEAVCRQNDPVLGPYGEYKRVLEEVKVCKLLTQNQSIMNG---GQ 120
           NVREED+RKAV+SL+WEAVCRQNDPVLGP+GEYKRVLEE+KVCK + QNQS  +    GQ
Sbjct: 61  NVREEDRRKAVESLVWEAVCRQNDPVLGPFGEYKRVLEELKVCK-MGQNQSQSSNPFVGQ 120

Query: 121 VGLGYKPIIPCLGAWNNNNSNDNNNNNNNNNNNSSSNNGNGNGNLINNGNGIMGIINGGV 180
           VGL      PC G                             G++ NNGNGIMG+INGGV
Sbjct: 121 VGL------PCFG-----------------------------GSISNNGNGIMGLINGGV 180

Query: 181 NSSHLLNYFHDNYVSAIVDSSPYSNSSAYNLQSHEKLMRLQQD-KEISSNMVVPL----- 240
           N +HL NY HDN +SAI+DSSPY+NSS YNLQS EKLMRLQQD KEISS +VVP      
Sbjct: 181 NGTHLFNYLHDN-LSAIIDSSPYTNSSTYNLQSPEKLMRLQQDHKEISSTIVVPFQPPPP 223

Query: 241 --------QQQQHPTFHHCF 244
                   Q QQHP FHHCF
Sbjct: 241 QQQQQHQQQHQQHPNFHHCF 223

[Close]

BLAST of CSPI02G26080 vs. TAIR 10
Match: AT1G06280.1 (LOB domain-containing protein 2 )

HSP 1 Score: 138.3 bits (347), Expect = 8.4e-33
Identity = 88/170 (51.76%), Postives = 114/170 (67.06%), Query Frame = 0


Query: 14  ACAACKHQRKKCHETCPLAPYFPAERNREFQAVHKVFGVSNVTKMVKNVREEDKRKAVDS 73
           ACA+CKHQRKKC+  C L+PYFPA + +EFQAVHKVFGVSNV KMV+ VREED+ K  DS
Sbjct: 24  ACASCKHQRKKCNNECILSPYFPARKTKEFQAVHKVFGVSNVQKMVRTVREEDRTKLSDS 83

Query: 74  LIWEAVCRQNDPVLGPYGEYKRVLEEVKVCKLLTQNQSIMNGGQVGLGYKPIIPCLGAWN 133
           L WEA+ RQ DPVLG YGEY+R+ EE+K+ K L  NQ                P +G W+
Sbjct: 84  LTWEALWRQKDPVLGSYGEYRRICEELKLYKSLVHNQ----------------PLIG-WD 143

Query: 134 NNNSNDNNNNNNNNNNNSSSNNGNGNGNLINNGNGI-MGIINGGVNSSHL 183
           NN    NNN+NN N    ++++G+G  ++ NNG G+   I+NGG  S ++
Sbjct: 144 NNQRVFNNNSNNKNGLAMTNSSGSGGFSVNNNGVGVNREIVNGGYASRNV 176

[Close]

BLAST of CSPI02G26080 vs. TAIR 10
Match: AT3G13850.1 (LOB domain-containing protein 22 )

HSP 1 Score: 95.5 bits (236), Expect = 6.2e-20
Identity = 44/98 (44.90%), Postives = 69/98 (70.41%), Query Frame = 0


Query: 4   HNNGVLQGTPACAACKHQRKKCHETCPLAPYFPAERNREFQAVHKVFGVSNVTKMVKNVR 63
           +NN   Q   ACAACK+QR+KC   C LAPYFP +R+R+F   HK+FGVSN+TK++K++ 
Sbjct: 29  NNNSTNQ---ACAACKYQRRKCAPDCLLAPYFPHDRHRQFLNAHKLFGVSNITKIIKSLT 88

Query: 64  EEDKRKAVDSLIWEAVCRQNDPVLGPYGEYKRVLEEVK 102
             +K  A+ ++++++  R NDPV G YG  K++  +++
Sbjct: 89  PPEKDAAMHTIMFQSDARANDPVDGCYGIIKKLQYQIE 123

[Close]

BLAST of CSPI02G26080 vs. TAIR 10
Match: AT1G72980.1 (LOB domain-containing protein 7 )

HSP 1 Score: 92.4 bits (228), Expect = 5.3e-19
Identity = 47/113 (41.59%), Postives = 64/113 (56.64%), Query Frame = 0


Query: 12  TPACAACKHQRKKCHETCPLAPYFPAERNREFQAVHKVFGVSNVTKMVKNVREEDKRKAV 71
           T ACAACKHQRKKC + C LA YFP +   +F   HK+FGVSN+TKM+K + E  +  A+
Sbjct: 11  TTACAACKHQRKKCKKNCILARYFPQDGTNKFLNAHKLFGVSNITKMLKRIEESQRDIAM 70

Query: 72  DSLIWEAVCRQNDPVLGPY--------------GEYKRVLEEVKVCKLLTQNQ 111
           ++LI+ A  R  DPV G Y               E     +++ +C+ L Q Q
Sbjct: 71  ENLIYHANARALDPVGGVYRTICDLKCKIEFVQTELNLTRQQIDMCRSLAQEQ 123

[Close]

BLAST of CSPI02G26080 vs. TAIR 10
Match: AT3G50510.1 (LOB domain-containing protein 28 )

HSP 1 Score: 87.4 bits (215), Expect = 1.7e-17
Identity = 39/87 (44.83%), Postives = 56/87 (64.37%), Query Frame = 0


Query: 15  CAACKHQRKKCHETCPLAPYFPAERNREFQAVHKVFGVSNVTKMVKNVREEDKRKAVDSL 74
           CAACKH R+KC E C  APYFP+ +   ++AVHKVFG S+V  ++ ++    +  A+D+L
Sbjct: 13  CAACKHLRRKCTEDCVFAPYFPSTKLDNYEAVHKVFGASHVATLINSLHPCQREFAMDTL 72

Query: 75  IWEAVCRQNDPVLGPYGEYKRVLEEVK 102
            WEA  + NDPV G  G    +L ++K
Sbjct: 73  AWEAQVQANDPVNGCLGIIYNLLSQIK 99

[Close]

BLAST of CSPI02G26080 vs. TAIR 10
Match: AT2G30130.1 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 69.3 bits (168), Expect = 4.8e-12
Identity = 56/163 (34.36%), Postives = 84/163 (51.53%), Query Frame = 0


Query: 11  GTPACAACKHQRKKCHETCPLAPYFPAERNREFQAVHKVFGVSNVTKMVKNVREEDKRKA 70
           G+  CA+CK  R++C + C  APYFP +   +F  VHKVFG SNV+KM++ +    +  A
Sbjct: 5   GSSPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADA 64

Query: 71  VDSLIWEAVCRQNDPVLGPYG------------EYKRVLEEVKVCKLLTQNQSIMNGGQV 130
           V+SL++EA  R  DPV G  G            + +  + + ++  +  QN+  +     
Sbjct: 65  VNSLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQNEPTLQSHHQ 124

Query: 131 GLGYKPIIPCLGAWNNNNSNDNNNNNNNNNNNSSSNNGNGNGN 162
            L        L   NNNN N+ N NNNNNN   + ++G  N N
Sbjct: 125 VLELDQDHKAL-LLNNNNINNCNTNNNNNNFGYAMSSGQFNSN 166

The following BLAST results are available for this feature:

BLAST of CSPI02G26080 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LNB9	1.2e-31	51.76	LOB domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=LBD2 PE=2 SV=...	[more]
Q9LRW1	8.8e-19	44.90	LOB domain-containing protein 22 OS=Arabidopsis thaliana OX=3702 GN=LBD22 PE=2 S...	[more]
Q9SSM9	7.4e-18	41.59	LOB domain-containing protein 7 OS=Arabidopsis thaliana OX=3702 GN=LBD7 PE=2 SV=...	[more]
Q9SCS4	2.4e-16	44.83	LOB domain-containing protein 28 OS=Arabidopsis thaliana OX=3702 GN=LBD28 PE=2 S...	[more]
Q8LBW3	6.7e-11	34.36	LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 S...	[more]

BLAST of CSPI02G26080 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CE97	6.8e-115	87.80	LOB domain-containing protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A1S4E1K1	6.8e-115	87.80	LOB domain-containing protein 2 OS=Cucumis melo OX=3656 GN=LOC103495999 PE=3 SV=...	[more]
A0A6J1CHJ9	7.8e-87	70.56	LOB domain-containing protein 2 OS=Momordica charantia OX=3673 GN=LOC111011230 P...	[more]
A0A6J1G604	3.2e-80	65.12	LOB domain-containing protein 2 OS=Cucurbita moschata OX=3662 GN=LOC111451117 PE...	[more]
A0A6J1I7L7	4.2e-80	65.63	LOB domain-containing protein 2 OS=Cucurbita maxima OX=3661 GN=LOC111469870 PE=3...	[more]

BLAST of CSPI02G26080 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031737200.1	2.0e-124	95.06	LOB domain-containing protein 2 [Cucumis sativus] >KAE8652276.1 hypothetical pro...	[more]
XP_016901865.1	1.4e-114	87.80	PREDICTED: LOB domain-containing protein 2 [Cucumis melo] >TYK09538.1 LOB domain...	[more]
XP_038900978.1	8.8e-109	84.96	LOB domain-containing protein 2 [Benincasa hispida]	[more]
XP_022140622.1	1.6e-86	70.56	LOB domain-containing protein 2 [Momordica charantia]	[more]
XP_023533791.1	1.7e-80	65.00	LOB domain-containing protein 2 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CSPI02G26080 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G06280.1	8.4e-33	51.76	LOB domain-containing protein 2	[more]
AT3G13850.1	6.2e-20	44.90	LOB domain-containing protein 22	[more]
AT1G72980.1	5.3e-19	41.59	LOB domain-containing protein 7	[more]
AT3G50510.1	1.7e-17	44.83	LOB domain-containing protein 28	[more]
AT2G30130.1	4.8e-12	34.36	Lateral organ boundaries (LOB) domain family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004883	Lateral organ boundaries, LOB	PFAM	PF03195	LOB	coord: 14..103 e-value: 1.8E-32 score: 111.8
IPR004883	Lateral organ boundaries, LOB	PROSITE	PS50891	LOB	coord: 13..113 score: 22.838028
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 137..159
None	No IPR available	PANTHER	PTHR31301:SF135	LOB DOMAIN-CONTAINING PROTEIN 2	coord: 10..236
None	No IPR available	PANTHER	PTHR31301	LOB DOMAIN-CONTAINING PROTEIN 4-RELATED	coord: 10..236

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI02G26080.1	CSPI02G26080.1	mRNA