CSPI02G25860 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI02G25860
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr2: 21944416 .. 21944964 (+)
RNA-Seq ExpressionCSPI02G25860
SyntenyCSPI02G25860
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATTCGTGGATGCCTAAACCTCTAACGCCTCATCCACCAGCACTTCCCCTTTTCCATGTTTTAAATGTCTATAGCTCGGGGTGGGCTGATTCATCACTTCGTCTCCCACTTATCGTGTTCTTACGTGATCCAAATCACTTAAGTCTCCAAATATTTCTTCGTCCTCCCTCCTCCTCAATTTGCTTGCAAATGCAATTGGAAGTTGGGTTTGTCCCAATGGACACTGTCTTAGGCATATCAAAACGCACAGTAAAAAGGTTTTCAATATGTTTGGGCTTAGTGAATTTTTTTCTCGTAGAGCCCTCAAGTTTGGTGCTCTACAAGGAAGATTGGTTGGATTTCTTAAAAGAGGGGACAAGGGCGGTGAATGGTTGTTTCTGGGTAGCGGTGGATGAGGATTCCTCCTTTCTTTTAAGGAATTTGGATGTCTTGGCGAGTTCAAGGGTGGATTCCTGTTGGTTGGTCATTATGAGTAAGGTTGATGTGATGAGTTTTCTGGCGAGAATGATGAATTTTCTAGTGAGAGCAAGAACGCACAGAGAGTTC

mRNA sequence

ATGAATTCGTGGATGCCTAAACCTCTAACGCCTCATCCACCAGCACTTCCCCTTTTCCATGTTTTAAATGTCTATAGCTCGGGGTGGGCTGATTCATCACTTCGTCTCCCACTTATCGTGTTCTTACGTGATCCAAATCACTTAAGTCTCCAAATATTTCTTCGTCCTCCCTCCTCCTCAATTTGCTTGCAAATGCAATTGGAAGTTGGGTTTGTCCCAATGGACACTGTCTTAGGCATATCAAAACGCACAGTAAAAAGGTTTTCAATATGTTTGGGCTTAGTGAATTTTTTTCTCGTAGAGCCCTCAAGTTTGGTGCTCTACAAGGAAGATTGGTTGGATTTCTTAAAAGAGGGGACAAGGGCGGTGAATGGTTGTTTCTGGGTAGCGGTGGATGAGGATTCCTCCTTTCTTTTAAGGAATTTGGATGTCTTGGCGAGTTCAAGGGTGGATTCCTGTTGGTTGGTCATTATGAGTAAGGTTGATGTGATGAGTTTTCTGGCGAGAATGATGAATTTTCTAGTGAGAGCAAGAACGCACAGAGAGTTC

Coding sequence (CDS)

ATGAATTCGTGGATGCCTAAACCTCTAACGCCTCATCCACCAGCACTTCCCCTTTTCCATGTTTTAAATGTCTATAGCTCGGGGTGGGCTGATTCATCACTTCGTCTCCCACTTATCGTGTTCTTACGTGATCCAAATCACTTAAGTCTCCAAATATTTCTTCGTCCTCCCTCCTCCTCAATTTGCTTGCAAATGCAATTGGAAGTTGGGTTTGTCCCAATGGACACTGTCTTAGGCATATCAAAACGCACAGTAAAAAGGTTTTCAATATGTTTGGGCTTAGTGAATTTTTTTCTCGTAGAGCCCTCAAGTTTGGTGCTCTACAAGGAAGATTGGTTGGATTTCTTAAAAGAGGGGACAAGGGCGGTGAATGGTTGTTTCTGGGTAGCGGTGGATGAGGATTCCTCCTTTCTTTTAAGGAATTTGGATGTCTTGGCGAGTTCAAGGGTGGATTCCTGTTGGTTGGTCATTATGAGTAAGGTTGATGTGATGAGTTTTCTGGCGAGAATGATGAATTTTCTAGTGAGAGCAAGAACGCACAGAGAGTTC

Protein sequence

MNSWMPKPLTPHPPALPLFHVLNVYSSGWADSSLRLPLIVFLRDPNHLSLQIFLRPPSSSICLQMQLEVGFVPMDTVLGISKRTVKRFSICLGLVNFFLVEPSSLVLYKEDWLDFLKEGTRAVNGCFWVAVDEDSSFLLRNLDVLASSRVDSCWLVIMSKVDVMSFLARMMNFLVRARTHREF
Homology
[Close]
BLAST of CSPI02G25860 vs. ExPASy TrEMBL
Match: A0A0A0LQ91 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G408400 PE=4 SV=1)

HSP 1 Score: 363.6 bits (932), Expect = 4.8e-97
Identity = 180/183 (98.36%), Postives = 180/183 (98.36%), Query Frame = 0 

Query: 1   MNSWMPKPLTPHPPALPLFHVLNVYSSGWADSSLRLPLIVFLRDPNHLSLQIFLRPPSSS 60
           MNSWMPKPLTPHPPALPLFHVLNVYSSGWADSSLRLPLIVFLRDPNHLSLQIFLRPPSSS
Sbjct: 1   MNSWMPKPLTPHPPALPLFHVLNVYSSGWADSSLRLPLIVFLRDPNHLSLQIFLRPPSSS 60

Query: 61  ICLQMQLEVGFVPMDTVLGISKRTVKRFSICLGLVNFFLVEPSSLVLYKEDWLDFLKEGT 120
           I LQMQLEVGFVPMDTVLGISKRTVKRFSICLGLVNFFLVEPSSLVLYKEDWLDFLKEGT
Sbjct: 61  IRLQMQLEVGFVPMDTVLGISKRTVKRFSICLGLVNFFLVEPSSLVLYKEDWLDFLKEGT 120

Query: 121 RAVNGCFWVAVDEDSSFLLRNLDVLASSRVDSCWLVIMSKVDVMSFLARMMNFLVRARTH 180
           RAVNGCFWVAVDEDSSFLLRNLDVLASSRVD CWLVIMSKVD MSFLARMMNFLVRARTH
Sbjct: 121 RAVNGCFWVAVDEDSSFLLRNLDVLASSRVDFCWLVIMSKVDGMSFLARMMNFLVRARTH 180

Query: 181 REF 184
           REF
Sbjct: 181 REF 183

[Close]
BLAST of CSPI02G25860 vs. NCBI nr
Match: KGN63194.1 (hypothetical protein Csa_021976 [Cucumis sativus])

HSP 1 Score: 363.6 bits (932), Expect = 9.9e-97
Identity = 180/183 (98.36%), Postives = 180/183 (98.36%), Query Frame = 0 

Query: 1   MNSWMPKPLTPHPPALPLFHVLNVYSSGWADSSLRLPLIVFLRDPNHLSLQIFLRPPSSS 60
           MNSWMPKPLTPHPPALPLFHVLNVYSSGWADSSLRLPLIVFLRDPNHLSLQIFLRPPSSS
Sbjct: 1   MNSWMPKPLTPHPPALPLFHVLNVYSSGWADSSLRLPLIVFLRDPNHLSLQIFLRPPSSS 60

Query: 61  ICLQMQLEVGFVPMDTVLGISKRTVKRFSICLGLVNFFLVEPSSLVLYKEDWLDFLKEGT 120
           I LQMQLEVGFVPMDTVLGISKRTVKRFSICLGLVNFFLVEPSSLVLYKEDWLDFLKEGT
Sbjct: 61  IRLQMQLEVGFVPMDTVLGISKRTVKRFSICLGLVNFFLVEPSSLVLYKEDWLDFLKEGT 120

Query: 121 RAVNGCFWVAVDEDSSFLLRNLDVLASSRVDSCWLVIMSKVDVMSFLARMMNFLVRARTH 180
           RAVNGCFWVAVDEDSSFLLRNLDVLASSRVD CWLVIMSKVD MSFLARMMNFLVRARTH
Sbjct: 121 RAVNGCFWVAVDEDSSFLLRNLDVLASSRVDFCWLVIMSKVDGMSFLARMMNFLVRARTH 180

Query: 181 REF 184
           REF
Sbjct: 181 REF 183

The following BLAST results are available for this feature:
BLAST of CSPI02G25860 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI02G25860 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LQ914.8e-9798.36Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G408400 PE=4 SV=1[more]
BLAST of CSPI02G25860 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN63194.19.9e-9798.36hypothetical protein Csa_021976 [Cucumis sativus][more]
BLAST of CSPI02G25860 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI02G25860.1CSPI02G25860.1mRNA