CSPI02G20930 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI02G20930
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr2: 18461200 .. 18461415 (-)
RNA-Seq ExpressionCSPI02G20930
SyntenyCSPI02G20930
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCTTTGACCTACGTGTGCCAATCATAAAGCATCCATTTCAAAATAATACAAACGACGTGGCAGCACATCAGCCGCCACAACTTCAACGCAGATCCATGTGCTCCGCCGCGGGAGCACCGGAAACCCCCGCCGGAAACTTGAAAGGGTGTCAAAACGTATCACAGAAAGGAGAAAAAAGATATATGTTTAATTACAACAATGAAGATAAGTAA

mRNA sequence

ATGGCCTTTGACCTACGTGTGCCAATCATAAAGCATCCATTTCAAAATAATACAAACGACGTGGCAGCACATCAGCCGCCACAACTTCAACGCAGATCCATGTGCTCCGCCGCGGGAGCACCGGAAACCCCCGCCGGAAACTTGAAAGGGTGTCAAAACGTATCACAGAAAGGAGAAAAAAGATATATGTTTAATTACAACAATGAAGATAAGTAA

Coding sequence (CDS)

ATGGCCTTTGACCTACGTGTGCCAATCATAAAGCATCCATTTCAAAATAATACAAACGACGTGGCAGCACATCAGCCGCCACAACTTCAACGCAGATCCATGTGCTCCGCCGCGGGAGCACCGGAAACCCCCGCCGGAAACTTGAAAGGGTGTCAAAACGTATCACAGAAAGGAGAAAAAAGATATATGTTTAATTACAACAATGAAGATAAGTAA

Protein sequence

MAFDLRVPIIKHPFQNNTNDVAAHQPPQLQRRSMCSAAGAPETPAGNLKGCQNVSQKGEKRYMFNYNNEDK*
Homology
[Close]
BLAST of CSPI02G20930 vs. NCBI nr
Match: KAE8652129.1 (hypothetical protein Csa_022533, partial [Cucumis sativus])

HSP 1 Score: 107.1 bits (266), Expect = 6.6e-20
Identity = 50/53 (94.34%), Postives = 52/53 (98.11%), Query Frame = 0 

Query: 1  MAFDLRVPIIKHPFQNNTNDVAAHQPPQLQRRSMCSAAGAPETPAGNLKGCQN 54
          MAFDLRVPIIKHPFQNNTNDVAA+QPPQLQRRSMCSAAGAP+TPAGNLK CQN
Sbjct: 1  MAFDLRVPIIKHPFQNNTNDVAANQPPQLQRRSMCSAAGAPQTPAGNLKRCQN 53

The following BLAST results are available for this feature:
BLAST of CSPI02G20930 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI02G20930 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI02G20930 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8652129.16.6e-2094.34hypothetical protein Csa_022533, partial [Cucumis sativus][more]
BLAST of CSPI02G20930 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI02G20930.1CSPI02G20930.1mRNA