CSPI02G19700 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI02G19700
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Unknown protein
Location	Chr2: 17758447 .. 17759100 (+)
RNA-Seq Expression	CSPI02G19700
Synteny	CSPI02G19700

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACAAGGCCGGTTCGCATCGAGCCGGGCCCACGGTTTCCCCTTTCCACTCCAATGCAGAAGGCTCACCGGACCCGGGTGTAAATCTCGGCACAGTCCCCGGAAATTGTCACCGCCTAGTCCGTGCTGGTTCCATCGGTGGTCTACGGGAACAATGTTTCCAGCGAAAACGAGCATGAACGGCGGAAGAGATCCGAGCTCGTAGATCCTCATTCGTTTTTGAAGCTCCATCCATTCCTCGATTTTAGAGGTGAAGTCGCCGAGACGCCACCGGGAGAGGTCGATGACCATGACGCCGGTATTGAAGTAACAGGGGTTGCGATTGGCGAAGGTGAGAGACAGAGAGGGATTGGACCAGAAAGTGGGAGTGAAATAGGAAGTGAAATTGGCGTTGCAGTACTCCGGTGCTGCGAGTACAGCGTCGTTTAATTGGGTATTTGCGAGATTAGAGATATCGTCAACGAGGATTAGATCCGAATCGAGATAGACAACACGACGGACGCAGAGAGGGAGGAGGTCGGCCAAGTAGCTACGTGCGTAGTTCAATGGACAATCCAGAGCGGAGCGAATTGAGGTGGAGATCAGACGGGAGACAGCTCCATCATCGAATGGGTAGATTTGAAATTTCAGGTATGGGAAGGAGGAGGAAATGG

mRNA sequence

ATGGACAAGGCCGGTTCGCATCGAGCCGGGCCCACGGTTTCCCCTTTCCACTCCAATGCAGAAGGCTCACCGGACCCGGGTTCCGTGCTGGTTCCATCGGTGGTCTACGGGAACAATGTTTCCAGCGAAAACGAGCATGAACGGCGGAAGAGATCCGAGCTCGTAGATCCTCATTCGTTTTTGAAGCTCCATCCATTCCTCGATTTTAGAGGTGAAGTCGCCGAGACGCCACCGGGAGAGGTCGATGACCATGACGCCGGTATTGAAGTAACAGGGGTTGCGATTGGCGAAGGTGAGAGACAGAGAGGGATTGGACCAGAAAGTGGGAGTGAAATAGGAAGTGAAATTGGCGTTGCAGTACTCCGGTGCTGCGAGTACAGCGTCAGATATCGTCAACGAGGATTAGATCCGAATCGAGATAGACAACACGACGGACGCAGAGAGGGAGGAGGTCGGCCAAGTAGCTACGTGCGTAGTTCAATGGACAATCCAGAGCGGAGCGAATTGAGGTGGAGATCAGACGGGAGACAGCTCCATCATCGAATGGGTAGATTTGAAATTTCAGGTATGGGAAGGAGGAGGAAATGG

Coding sequence (CDS)

ATGGACAAGGCCGGTTCGCATCGAGCCGGGCCCACGGTTTCCCCTTTCCACTCCAATGCAGAAGGCTCACCGGACCCGGGTTCCGTGCTGGTTCCATCGGTGGTCTACGGGAACAATGTTTCCAGCGAAAACGAGCATGAACGGCGGAAGAGATCCGAGCTCGTAGATCCTCATTCGTTTTTGAAGCTCCATCCATTCCTCGATTTTAGAGGTGAAGTCGCCGAGACGCCACCGGGAGAGGTCGATGACCATGACGCCGGTATTGAAGTAACAGGGGTTGCGATTGGCGAAGGTGAGAGACAGAGAGGGATTGGACCAGAAAGTGGGAGTGAAATAGGAAGTGAAATTGGCGTTGCAGTACTCCGGTGCTGCGAGTACAGCGTCAGATATCGTCAACGAGGATTAGATCCGAATCGAGATAGACAACACGACGGACGCAGAGAGGGAGGAGGTCGGCCAAGTAGCTACGTGCGTAGTTCAATGGACAATCCAGAGCGGAGCGAATTGAGGTGGAGATCAGACGGGAGACAGCTCCATCATCGAATGGGTAGATTTGAAATTTCAGGTATGGGAAGGAGGAGGAAATGG

Protein sequence

MDKAGSHRAGPTVSPFHSNAEGSPDPGSVLVPSVVYGNNVSSENEHERRKRSELVDPHSFLKLHPFLDFRGEVAETPPGEVDDHDAGIEVTGVAIGEGERQRGIGPESGSEIGSEIGVAVLRCCEYSVRYRQRGLDPNRDRQHDGRREGGGRPSSYVRSSMDNPERSELRWRSDGRQLHHRMGRFEISGMGRRRKW

Homology

[Close]

BLAST of CSPI02G19700 vs. ExPASy TrEMBL
Match: A0A444Z9U7 (Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_B05g079443 PE=4 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 3.5e-21
Identity = 58/107 (54.21%), Postives = 72/107 (67.29%), Query Frame = 0


Query: 28  SVLVPSVVYGNNVSSENEHERRKRSELVDPHSFLKLHPFLDFRGEVAETPPGEVDDHDAG 87
           +VLVP +++   V  EN+ +RR+R ELVDPH  LKLHP LD  G VA TPP E+DDHDA 
Sbjct: 15  TVLVPPMIHRAYVPGENQKKRRQRPELVDPHPLLKLHPLLDLGGVVAGTPPLEIDDHDAS 74

Query: 88  IEVTGVAIGEGERQRGIGPESGSEIGSEIGVAVLRCCEYSVRYRQRG 135
           +EV G + GE ERQ  +GPE  SE+ +E+ V VLRC E  V    RG
Sbjct: 75  VEVAGPSGGECERQGRVGPERWSEVCAEVCVTVLRCGEDGVVREWRG 121

[Close]

BLAST of CSPI02G19700 vs. ExPASy TrEMBL
Match: A0A2P5AIS9 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_328190 PE=4 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 3.1e-17
Identity = 50/107 (46.73%), Postives = 69/107 (64.49%), Query Frame = 0


Query: 28  SVLVPSVVYGNNVSSENEHERRKRSELVDPHSFLKLHPFLDFRGEVAETPPGEVDDHDAG 87
           +VLVP+VV  ++V  E + ERR+R++LVDPH  L+LHP LD    V   P  ++D H  G
Sbjct: 23  AVLVPAVVDRSDVPGEYQQERRERAQLVDPHPLLELHPLLDLARVVPTPPAVQIDHHHPG 82

Query: 88  IEVTGVAIGEGERQRGIGPESGSEIGSEIGVAVLRCCEYSVRYRQRG 135
           +EV G+   EG+ +R + PE G E+GSE+GVAVLR  E+      RG
Sbjct: 83  VEVAGLPAREGQGERRVRPECGGEVGSEVGVAVLRRGEHGRLAELRG 129

[Close]

BLAST of CSPI02G19700 vs. ExPASy TrEMBL
Match: A0A2P5FZG0 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_012350 PE=4 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 5.3e-17
Identity = 49/107 (45.79%), Postives = 69/107 (64.49%), Query Frame = 0


Query: 28  SVLVPSVVYGNNVSSENEHERRKRSELVDPHSFLKLHPFLDFRGEVAETPPGEVDDHDAG 87
           +VLVP+VV  ++V  E++ ERR+R++LVDPH  L+LHP LD    V   P  ++D H  G
Sbjct: 23  AVLVPAVVDRSDVPGEHQQERRERAQLVDPHPLLELHPVLDLARVVPTPPAVQIDHHHPG 82

Query: 88  IEVTGVAIGEGERQRGIGPESGSEIGSEIGVAVLRCCEYSVRYRQRG 135
           +EV G+   EG+ +R + PE G E+G E+GVAVLR  E+      RG
Sbjct: 83  VEVAGLPAREGQGERRVRPERGGEVGGEVGVAVLRRGEHGRLAELRG 129

[Close]

BLAST of CSPI02G19700 vs. ExPASy TrEMBL
Match: A0A445EJC8 (Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_A02g010094 PE=4 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 1.9e-14
Identity = 44/98 (44.90%), Postives = 66/98 (67.35%), Query Frame = 0


Query: 28  SVLVPSVVYGNNVSSENEHERRKRSELVDPHSFLKLHPFLDFRGEVAETPPGEVDDHDAG 87
           ++LVP +++G+N+SSEN+ +R +R++LVDP   L LHP LD    +   PP ++D HD  
Sbjct: 23  TMLVPPMIHGSNISSENKKKRWQRTKLVDPRPLLHLHPLLDLPRVIPMAPPIQIDHHDPC 82

Query: 88  IEVTGVAIGEGERQRGIGPESGSEIGSEIGVAVLRCCE 126
           +EV  +++ E +RQR I PE   E+  EI VAVLR C+
Sbjct: 83  VEVARLSVRECKRQRRIRPECLCEVRCEIRVAVLRRCK 120

[Close]

BLAST of CSPI02G19700 vs. ExPASy TrEMBL
Match: A0A2P2P5X9 (Uncharacterized protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 1.6e-13
Identity = 44/106 (41.51%), Postives = 67/106 (63.21%), Query Frame = 0


Query: 29  VLVPSVVYGNNVSSENEHERRKRSELVDPHSFLKLHPFLDFRGEVAETPPGEVDDHDAGI 88
           +LVP+V+    V  +N+ +RR R+ELVDP+  L+LHPF D    +A +P  +++DH  G+
Sbjct: 24  MLVPTVIDRGYVPCKNKQDRRLRAELVDPNPLLQLHPFDDLLRVIALSPSFQINDHYPGV 83

Query: 89  EVTGVAIGEGERQRGIGPESGSEIGSEIGVAVLRCCEYSVRYRQRG 135
           EV  +A  +  RQR IGPE   E+  E+G+A+L C +  V  + RG
Sbjct: 84  EVAWIASRKCRRQRRIGPERRREVRCEVGIAILGCSQDRVVAQGRG 129

[Close]

BLAST of CSPI02G19700 vs. NCBI nr
Match: RYR10955.1 (hypothetical protein Ahy_B05g079443 [Arachis hypogaea])

HSP 1 Score: 111.7 bits (278), Expect = 7.3e-21
Identity = 58/107 (54.21%), Postives = 72/107 (67.29%), Query Frame = 0


Query: 28  SVLVPSVVYGNNVSSENEHERRKRSELVDPHSFLKLHPFLDFRGEVAETPPGEVDDHDAG 87
           +VLVP +++   V  EN+ +RR+R ELVDPH  LKLHP LD  G VA TPP E+DDHDA 
Sbjct: 15  TVLVPPMIHRAYVPGENQKKRRQRPELVDPHPLLKLHPLLDLGGVVAGTPPLEIDDHDAS 74

Query: 88  IEVTGVAIGEGERQRGIGPESGSEIGSEIGVAVLRCCEYSVRYRQRG 135
           +EV G + GE ERQ  +GPE  SE+ +E+ V VLRC E  V    RG
Sbjct: 75  VEVAGPSGGECERQGRVGPERWSEVCAEVCVTVLRCGEDGVVREWRG 121

[Close]

BLAST of CSPI02G19700 vs. NCBI nr
Match: PON36456.1 (hypothetical protein PanWU01x14_328190 [Parasponia andersonii])

HSP 1 Score: 98.6 bits (244), Expect = 6.4e-17
Identity = 50/107 (46.73%), Postives = 69/107 (64.49%), Query Frame = 0


Query: 28  SVLVPSVVYGNNVSSENEHERRKRSELVDPHSFLKLHPFLDFRGEVAETPPGEVDDHDAG 87
           +VLVP+VV  ++V  E + ERR+R++LVDPH  L+LHP LD    V   P  ++D H  G
Sbjct: 23  AVLVPAVVDRSDVPGEYQQERRERAQLVDPHPLLELHPLLDLARVVPTPPAVQIDHHHPG 82

Query: 88  IEVTGVAIGEGERQRGIGPESGSEIGSEIGVAVLRCCEYSVRYRQRG 135
           +EV G+   EG+ +R + PE G E+GSE+GVAVLR  E+      RG
Sbjct: 83  VEVAGLPAREGQGERRVRPECGGEVGSEVGVAVLRRGEHGRLAELRG 129

[Close]

BLAST of CSPI02G19700 vs. NCBI nr
Match: POO03174.1 (hypothetical protein TorRG33x02_012350 [Trema orientale])

HSP 1 Score: 97.8 bits (242), Expect = 1.1e-16
Identity = 49/107 (45.79%), Postives = 69/107 (64.49%), Query Frame = 0


Query: 28  SVLVPSVVYGNNVSSENEHERRKRSELVDPHSFLKLHPFLDFRGEVAETPPGEVDDHDAG 87
           +VLVP+VV  ++V  E++ ERR+R++LVDPH  L+LHP LD    V   P  ++D H  G
Sbjct: 23  AVLVPAVVDRSDVPGEHQQERRERAQLVDPHPLLELHPVLDLARVVPTPPAVQIDHHHPG 82

Query: 88  IEVTGVAIGEGERQRGIGPESGSEIGSEIGVAVLRCCEYSVRYRQRG 135
           +EV G+   EG+ +R + PE G E+G E+GVAVLR  E+      RG
Sbjct: 83  VEVAGLPAREGQGERRVRPERGGEVGGEVGVAVLRRGEHGRLAELRG 129

[Close]

BLAST of CSPI02G19700 vs. NCBI nr
Match: RYR75452.1 (hypothetical protein Ahy_A02g010094 [Arachis hypogaea])

HSP 1 Score: 89.4 bits (220), Expect = 3.9e-14
Identity = 44/98 (44.90%), Postives = 66/98 (67.35%), Query Frame = 0


Query: 28  SVLVPSVVYGNNVSSENEHERRKRSELVDPHSFLKLHPFLDFRGEVAETPPGEVDDHDAG 87
           ++LVP +++G+N+SSEN+ +R +R++LVDP   L LHP LD    +   PP ++D HD  
Sbjct: 23  TMLVPPMIHGSNISSENKKKRWQRTKLVDPRPLLHLHPLLDLPRVIPMAPPIQIDHHDPC 82

Query: 88  IEVTGVAIGEGERQRGIGPESGSEIGSEIGVAVLRCCE 126
           +EV  +++ E +RQR I PE   E+  EI VAVLR C+
Sbjct: 83  VEVARLSVRECKRQRRIRPECLCEVRCEIRVAVLRRCK 120

[Close]

BLAST of CSPI02G19700 vs. NCBI nr
Match: CAB3498874.1 (unnamed protein product [Digitaria exilis])

HSP 1 Score: 87.8 bits (216), Expect = 1.1e-13
Identity = 57/134 (42.54%), Postives = 73/134 (54.48%), Query Frame = 0


Query: 29  VLVPSVVYGNNVSSENEHERRKRSELVDPHSFLKLHPFLDFRGEVAETPPGEVDDHDAGI 88
           VLVP VV+  + S E+E ERR+R++LVD H  L+LHP LD R      PP EV+ H A +
Sbjct: 50  VLVPPVVHRRDASGEHEQERRQRAQLVDAHPLLELHPLLDPRRVPRPPPPREVEHHHARV 109

Query: 89  EVTGVAIGEGERQRGIGPESGSEIGSEIGVAVLRCCEYSVR-YRQRGLDPNRDRQH---- 148
           EV   A GEG  +    PE   E+G E+G AVLR     +R  R+RG   +   +H    
Sbjct: 110 EVARAAAGEGRGELRRRPEPRREVGGEVGAAVLRRRHGRLREERRRGEGGDVVGEHDVGV 169

Query: 149 ------DGRREGGG 152
                 D  REGGG
Sbjct: 170 EVDDAADAGREGGG 183

The following BLAST results are available for this feature:

BLAST of CSPI02G19700 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI02G19700 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A444Z9U7	3.5e-21	54.21	Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_B05g079443 PE=4 SV=1	[more]
A0A2P5AIS9	3.1e-17	46.73	Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_328190 PE...	[more]
A0A2P5FZG0	5.3e-17	45.79	Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_012350 PE=4 SV...	[more]
A0A445EJC8	1.9e-14	44.90	Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_A02g010094 PE=4 SV=1	[more]
A0A2P2P5X9	1.6e-13	41.51	Uncharacterized protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1	[more]

BLAST of CSPI02G19700 vs. NCBI nr


Match Name	E-value	Identity	Description
RYR10955.1	7.3e-21	54.21	hypothetical protein Ahy_B05g079443 [Arachis hypogaea]	[more]
PON36456.1	6.4e-17	46.73	hypothetical protein PanWU01x14_328190 [Parasponia andersonii]	[more]
POO03174.1	1.1e-16	45.79	hypothetical protein TorRG33x02_012350 [Trema orientale]	[more]
RYR75452.1	3.9e-14	44.90	hypothetical protein Ahy_A02g010094 [Arachis hypogaea]	[more]
CAB3498874.1	1.1e-13	42.54	unnamed protein product [Digitaria exilis]	[more]

BLAST of CSPI02G19700 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 135..151
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 135..174
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..53

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI02G19700.1	CSPI02G19700.1	mRNA