CSPI02G19360 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI02G19360
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr2: 17590416 .. 17590998 (-)
RNA-Seq ExpressionCSPI02G19360
SyntenyCSPI02G19360
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TGGGAAAGTTACCTTTTAATTTGTTCTCCTAGGTAGCGTACTTTTCTTAGACTACTGGGCTATCAGCAATTTCAATCTCTACGAAACACTAAAGACCCAAAGTTGTTCAATTTTAAACTAGCATAATGTTCAACTCAAATCTTCCATAACATAAAAAGTCTCTTGGTTCTATGGTTTTTGGCGAAACTGATAATCAAAATAATGATCTTAAGAATGAACAATCAAAGGAATATCTGAACTCCTTGATTAGGAAAAATCGATTCTCAAATCGAACCGATCTTCCCGTTCGTTTGAGCTTACAGACGTTCTTCCATTGTAAGTATCGAAACTCAAAAGATATATATGTAATATAGAAAATACCTTATACCAACGGAGGGAAGAAGATCGGCAGAGAAGGTTTGCGGTGCTGAGCAAGGTGGAGAACGCGGCGGCGGGATGGTAGGACGCAACGGAAAATGGAGAGGCAGAAGGCGGGGGATTATATATATTTTTTTCTTCTTTTTATTTACTCTTTTAGATCAAGTGCGTTTGGGCCGTTAGATTGGGCAGGCGGGCTGATGAAGGATGGGTTTGGTTATATTGA

mRNA sequence

TGGGAAAGTTACCTTTTAATTTGTTCTCCTAGGTAGCGTACTTTTCTTAGACTACTGGGCTATCAGCAATTTCAATCTCTACGAAACACTAAAGACCCAAAGTTGTTCAATTTTAAACTAGCATAATGTTCAACTCAAATCTTCCATAACATAAAAAGTCTCTTGGTTCTATGGTTTTTGGCGAAACTGATAATCAAAATAATGATCTTAAGAATGAACAATCAAAGGAATATCTGAACTCCTTGATTAGGAAAAATCGATTCTCAAATCGAACCGATCTTCCCGGAAGAAGATCGGCAGAGAAGGTTTGCGGTGCTGAGCAAGGTGGAGAACGCGGCGGCGGGATGATCAAGTGCGTTTGGGCCGTTAGATTGGGCAGGCGGGCTGATGAAGGATGGGTTTGGTTATATTGA

Coding sequence (CDS)

ATGGTTTTTGGCGAAACTGATAATCAAAATAATGATCTTAAGAATGAACAATCAAAGGAATATCTGAACTCCTTGATTAGGAAAAATCGATTCTCAAATCGAACCGATCTTCCCGGAAGAAGATCGGCAGAGAAGGTTTGCGGTGCTGAGCAAGGTGGAGAACGCGGCGGCGGGATGATCAAGTGCGTTTGGGCCGTTAGATTGGGCAGGCGGGCTGATGAAGGATGGGTTTGGTTATATTGA

Protein sequence

MVFGETDNQNNDLKNEQSKEYLNSLIRKNRFSNRTDLPGRRSAEKVCGAEQGGERGGGMIKCVWAVRLGRRADEGWVWLY*
Homology
[Close]
BLAST of CSPI02G19360 vs. ExPASy TrEMBL
Match: A0A0A0LNH2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G360020 PE=4 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 2.2e-38
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 0 

Query: 1  MVFGETDNQNNDLKNEQSKEYLNSLIRKNRFSNRTDLPGRRSAEKVCGAEQGGERGGGMI 60
          MVFGETDNQNNDLKNEQSKEYLNSLIRKNRFSNRTDLPGRRSAEKVCGAEQGGERGGGMI
Sbjct: 1  MVFGETDNQNNDLKNEQSKEYLNSLIRKNRFSNRTDLPGRRSAEKVCGAEQGGERGGGMI 60

Query: 61 KCVWAVRLGRRADEGWVWLY 81
          KCVWAVRLGRRADEGWVWLY
Sbjct: 61 KCVWAVRLGRRADEGWVWLY 80

[Close]
BLAST of CSPI02G19360 vs. NCBI nr
Match: KGN62534.1 (hypothetical protein Csa_022029 [Cucumis sativus])

HSP 1 Score: 167.5 bits (423), Expect = 4.6e-38
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 0 

Query: 1  MVFGETDNQNNDLKNEQSKEYLNSLIRKNRFSNRTDLPGRRSAEKVCGAEQGGERGGGMI 60
          MVFGETDNQNNDLKNEQSKEYLNSLIRKNRFSNRTDLPGRRSAEKVCGAEQGGERGGGMI
Sbjct: 1  MVFGETDNQNNDLKNEQSKEYLNSLIRKNRFSNRTDLPGRRSAEKVCGAEQGGERGGGMI 60

Query: 61 KCVWAVRLGRRADEGWVWLY 81
          KCVWAVRLGRRADEGWVWLY
Sbjct: 61 KCVWAVRLGRRADEGWVWLY 80

The following BLAST results are available for this feature:
BLAST of CSPI02G19360 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI02G19360 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LNH22.2e-38100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G360020 PE=4 SV=1[more]
BLAST of CSPI02G19360 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN62534.14.6e-38100.00hypothetical protein Csa_022029 [Cucumis sativus][more]
BLAST of CSPI02G19360 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI02G19360.1CSPI02G19360.1mRNA