CSPI02G19220 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI02G19220
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	zinc transporter 7-like
Location	Chr2: 17527746 .. 17528713 (+)
RNA-Seq Expression	CSPI02G19220
Synteny	CSPI02G19220

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATCATAACACAGTTTTTTTGCATAGGCTACACTCATCTCTACCTTATTATTAGAAGGTAACCTGGTTATCATTGAGCATGTGAAAGGTAAATAATGTATTTAATATAAAAATCAAGATCTCTCTAATTTTTCTTCGACGTGATATTCTTTAACCCTAGTTAGTGGGGTACGCTAAGAAAATGTAGTATAAATACACAAAACCACGACCACCAAAGCTCACAAAACAAAACCCCCATTCCTCCTGAACCTCCTTCTCCAAAGAAAAAAGAAAAAAAGAAAAAAGAATGGCGTTCCGTTCAGTGAACAATCTTCAATTCTGGAAGGATGACATGAGGAGAGCTTACAGAGAGAAAGTTGGGAGTTCAAGAAGAAGGCGTATCAAAATCCGCGACATCATCGACGTCTTAGAAATCGTCGGACCCATCATCCCTCATTTCTTCGGTAGTAACTCTCTCAGTGCCGGTCCCGACAACTACAGTAATTATGGTAATAACCACATGAATGGTAGTTATGGTCGTCGTGACGATGACATGCATTCTTTCCACTGTGGCGGCGGCGGTGGTGGCCGGTTCGGTCTTGACATGGGTTCTGGTGATTATGGGAATGAAAGCAGGCACTCCGGTGGACGTGGAAATGGTAACAGTCAGTACGGGATGAGGATGGCTCTTCCTGAAGACTATTATGATCGTGAAATCACCGAGGAAGAGTTTGAGAGGCTTCTTGACTTTGCTGAGCAGAGCCATAACAATAATTCCAGAATGTACTGATCAAAATATAATATAAAAATTATATGTGTGGGACAAAATATAATAACATCAACCCCTTCCTTCTTGAAATCTACACCACTTCTACTCTATTATCCTTCTAATAAAATTTAAAAAAGTAATAATGGACTGCCTTGCTACTCCTTTTTCTTTCTTTTTCATAATAAAAAAAAAGTTACTTGAGGTTTTTCTTTCGATAAA

mRNA sequence

ATGATCATAACACAGTTTTTTTGCATAGGCTACACTCATCTCTACCTTATTATTAGAAGGTAACCTGGTTATCATTGAGCATGTGAAAGGTAAATAATGTATTTAATATAAAAATCAAGATCTCTCTAATTTTTCTTCGACGTGATATTCTTTAACCCTAGTTAGTGGGGTACGCTAAGAAAATGTAGTATAAATACACAAAACCACGACCACCAAAGCTCACAAAACAAAACCCCCATTCCTCCTGAACCTCCTTCTCCAAAGAAAAAAGAAAAAAAGAAAAAAGAATGGCGTTCCGTTCAGTGAACAATCTTCAATTCTGGAAGGATGACATGAGGAGAGCTTACAGAGAGAAAGTTGGGAGTTCAAGAAGAAGGCGTATCAAAATCCGCGACATCATCGACGTCTTAGAAATCGTCGGACCCATCATCCCTCATTTCTTCGGTAGTAACTCTCTCAGTGCCGGTCCCGACAACTACAGTAATTATGGTAATAACCACATGAATGGTAGTTATGGTCGTCGTGACGATGACATGCATTCTTTCCACTGTGGCGGCGGCGGTGGTGGCCGGTTCGGTCTTGACATGGGTTCTGGTGATTATGGGAATGAAAGCAGGCACTCCGGTGGACGTGGAAATGGTAACAGTCAGTACGGGATGAGGATGGCTCTTCCTGAAGACTATTATGATCGTGAAATCACCGAGGAAGAGTTTGAGAGGCTTCTTGACTTTGCTGAGCAGAGCCATAACAATAATTCCAGAATGTACTGATCAAAATATAATATAAAAATTATATGTGTGGGACAAAATATAATAACATCAACCCCTTCCTTCTTGAAATCTACACCACTTCTACTCTATTATCCTTCTAATAAAATTTAAAAAAGTAATAATGGACTGCCTTGCTACTCCTTTTTCTTTCTTTTTCATAATAAAAAAAAAGTTACTTGAGGTTTTTCTTTCGATAAA

Coding sequence (CDS)

ATGGCGTTCCGTTCAGTGAACAATCTTCAATTCTGGAAGGATGACATGAGGAGAGCTTACAGAGAGAAAGTTGGGAGTTCAAGAAGAAGGCGTATCAAAATCCGCGACATCATCGACGTCTTAGAAATCGTCGGACCCATCATCCCTCATTTCTTCGGTAGTAACTCTCTCAGTGCCGGTCCCGACAACTACAGTAATTATGGTAATAACCACATGAATGGTAGTTATGGTCGTCGTGACGATGACATGCATTCTTTCCACTGTGGCGGCGGCGGTGGTGGCCGGTTCGGTCTTGACATGGGTTCTGGTGATTATGGGAATGAAAGCAGGCACTCCGGTGGACGTGGAAATGGTAACAGTCAGTACGGGATGAGGATGGCTCTTCCTGAAGACTATTATGATCGTGAAATCACCGAGGAAGAGTTTGAGAGGCTTCTTGACTTTGCTGAGCAGAGCCATAACAATAATTCCAGAATGTACTGA

Protein sequence

MAFRSVNNLQFWKDDMRRAYREKVGSSRRRRIKIRDIIDVLEIVGPIIPHFFGSNSLSAGPDNYSNYGNNHMNGSYGRRDDDMHSFHCGGGGGGRFGLDMGSGDYGNESRHSGGRGNGNSQYGMRMALPEDYYDREITEEEFERLLDFAEQSHNNNSRMY*

Homology

[Close]

BLAST of CSPI02G19220 vs. ExPASy TrEMBL
Match: A0A0A0LKW7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G359890 PE=4 SV=1)

HSP 1 Score: 317.8 bits (813), Expect = 2.7e-83
Identity = 158/160 (98.75%), Postives = 158/160 (98.75%), Query Frame = 0


Query: 1   MAFRSVNNLQFWKDDMRRAYREKVGSSRRRRIKIRDIIDVLEIVGPIIPHFFGSNSLSAG 60
           MAFRSVNNLQFWKDDMRRAYREKVGSSRRRRIKIRDIIDVLEIVGPIIPHFFGSNSLSAG
Sbjct: 1   MAFRSVNNLQFWKDDMRRAYREKVGSSRRRRIKIRDIIDVLEIVGPIIPHFFGSNSLSAG 60

Query: 61  PDNYSNYGNNHMNGSYGRRDDDMHSFHCGGGGGGRFGLDMGSGDYGNESRHSGGRGNGNS 120
           PDNYSNYGNNHMNGSYGRRDDDMHSFHCGGGGGGRFGLDMGSGDYGNESRH GGRGNGNS
Sbjct: 61  PDNYSNYGNNHMNGSYGRRDDDMHSFHCGGGGGGRFGLDMGSGDYGNESRHYGGRGNGNS 120

Query: 121 QYGMRMALPEDYYDREITEEEFERLLDFAEQSHNNNSRMY 161
           QYGMRMAL EDYYDREITEEEFERLLDFAEQSHNNNSRMY
Sbjct: 121 QYGMRMALAEDYYDREITEEEFERLLDFAEQSHNNNSRMY 160

[Close]

BLAST of CSPI02G19220 vs. ExPASy TrEMBL
Match: A0A6J1HD14 (zinc transporter 7-like OS=Cucurbita moschata OX=3662 GN=LOC111462856 PE=4 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 1.4e-23
Identity = 81/167 (48.50%), Postives = 101/167 (60.48%), Query Frame = 0


Query: 1   MAFRSVNNLQFWKDDMRRAYREKVGSSRRRRIKIRDIIDVLEIVGPIIPHFFGSNSLSAG 60
           MA RSV+NL+  +DD+   YR     SRR R+KIRDII+++EI+GPIIPHFF  +    G
Sbjct: 1   MACRSVDNLR-CRDDLMNVYRANASRSRRGRVKIRDIIEIIEILGPIIPHFFKKH---GG 60

Query: 61  PDNYSNYGNNHMNGSYGRRDDDMHSFHCGGGGGGRFGLDMGSGDYGNESRHSG---GRG- 120
            +N+S+ G+      Y R  DDM         G RFG  M SG+YGN S H G   G G 
Sbjct: 61  ANNFSSCGSM----GYARDQDDM---------GSRFGFGMASGEYGNGSGHYGHSHGHGH 120

Query: 121 ---NGNSQYGMRMALPEDYYDREITEEEFERLLDFAEQSHNNNSRMY 161
              +G S YGM M   +DY D EI+EEEFE+LLD+AEQ    N RMY
Sbjct: 121 SHSHGESHYGMSMGHVDDYADHEISEEEFEKLLDYAEQC---NVRMY 147

[Close]

BLAST of CSPI02G19220 vs. NCBI nr
Match: KGN62520.1 (hypothetical protein Csa_022281 [Cucumis sativus])

HSP 1 Score: 317.8 bits (813), Expect = 5.5e-83
Identity = 158/160 (98.75%), Postives = 158/160 (98.75%), Query Frame = 0


Query: 1   MAFRSVNNLQFWKDDMRRAYREKVGSSRRRRIKIRDIIDVLEIVGPIIPHFFGSNSLSAG 60
           MAFRSVNNLQFWKDDMRRAYREKVGSSRRRRIKIRDIIDVLEIVGPIIPHFFGSNSLSAG
Sbjct: 1   MAFRSVNNLQFWKDDMRRAYREKVGSSRRRRIKIRDIIDVLEIVGPIIPHFFGSNSLSAG 60

Query: 61  PDNYSNYGNNHMNGSYGRRDDDMHSFHCGGGGGGRFGLDMGSGDYGNESRHSGGRGNGNS 120
           PDNYSNYGNNHMNGSYGRRDDDMHSFHCGGGGGGRFGLDMGSGDYGNESRH GGRGNGNS
Sbjct: 61  PDNYSNYGNNHMNGSYGRRDDDMHSFHCGGGGGGRFGLDMGSGDYGNESRHYGGRGNGNS 120

Query: 121 QYGMRMALPEDYYDREITEEEFERLLDFAEQSHNNNSRMY 161
           QYGMRMAL EDYYDREITEEEFERLLDFAEQSHNNNSRMY
Sbjct: 121 QYGMRMALAEDYYDREITEEEFERLLDFAEQSHNNNSRMY 160

[Close]

BLAST of CSPI02G19220 vs. NCBI nr
Match: XP_022962401.1 (zinc transporter 7-like [Cucurbita moschata])

HSP 1 Score: 119.4 bits (298), Expect = 2.9e-23
Identity = 81/167 (48.50%), Postives = 101/167 (60.48%), Query Frame = 0


Query: 1   MAFRSVNNLQFWKDDMRRAYREKVGSSRRRRIKIRDIIDVLEIVGPIIPHFFGSNSLSAG 60
           MA RSV+NL+  +DD+   YR     SRR R+KIRDII+++EI+GPIIPHFF  +    G
Sbjct: 1   MACRSVDNLR-CRDDLMNVYRANASRSRRGRVKIRDIIEIIEILGPIIPHFFKKH---GG 60

Query: 61  PDNYSNYGNNHMNGSYGRRDDDMHSFHCGGGGGGRFGLDMGSGDYGNESRHSG---GRG- 120
            +N+S+ G+      Y R  DDM         G RFG  M SG+YGN S H G   G G 
Sbjct: 61  ANNFSSCGSM----GYARDQDDM---------GSRFGFGMASGEYGNGSGHYGHSHGHGH 120

Query: 121 ---NGNSQYGMRMALPEDYYDREITEEEFERLLDFAEQSHNNNSRMY 161
              +G S YGM M   +DY D EI+EEEFE+LLD+AEQ    N RMY
Sbjct: 121 SHSHGESHYGMSMGHVDDYADHEISEEEFEKLLDYAEQC---NVRMY 147

[Close]

BLAST of CSPI02G19220 vs. NCBI nr
Match: KAG6598377.1 (hypothetical protein SDJN03_08155, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 114.8 bits (286), Expect = 7.0e-22
Identity = 80/167 (47.90%), Postives = 100/167 (59.88%), Query Frame = 0


Query: 1   MAFRSVNNLQFWKDDMRRAYREKVGSSRRRRIKIRDIIDVLEIVGPIIPHFFGSNSLSAG 60
           MA RSV+NL+  +DD+   YR     SRR R+KIRDII+++EI+GPIIP FF  +    G
Sbjct: 1   MACRSVDNLR-CRDDLMNVYRANARRSRRGRVKIRDIIEIIEILGPIIPPFFQKH---GG 60

Query: 61  PDNYSNYGNNHMNGSYGRRDDDMHSFHCGGGGGGRFGLDMGSGDYGNESRHSG---GRG- 120
            +N+S+ G+      Y R  DDM         G RFG  M SG+YGN S H G   G G 
Sbjct: 61  ANNFSSCGSM----GYARDQDDM---------GSRFGFGMASGEYGNGSGHYGHSHGHGH 120

Query: 121 ---NGNSQYGMRMALPEDYYDREITEEEFERLLDFAEQSHNNNSRMY 161
              +G S YGM M   +DY D EI+EEEFE+LLD+AEQ    N RMY
Sbjct: 121 SHSHGESHYGMSMGHVDDYADHEISEEEFEKLLDYAEQC---NVRMY 147

[Close]

BLAST of CSPI02G19220 vs. NCBI nr
Match: XP_023545419.1 (zinc transporter 7-A-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023545420.1 zinc transporter 7-A-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 112.1 bits (279), Expect = 4.6e-21
Identity = 80/171 (46.78%), Postives = 100/171 (58.48%), Query Frame = 0


Query: 1   MAFRSVNNLQFWKDDMRRAYREKVGSSRRRRIKIRDIIDVLEIVGPIIPHFFGSNSLSAG 60
           MA RSV+NL+  +DD+   YR     SRR R+KIRDII+++EI+GPIIP FF  +    G
Sbjct: 1   MACRSVDNLR-CRDDLMNVYRANARRSRRGRVKIRDIIEIIEILGPIIPPFFQKH---GG 60

Query: 61  PDNYSNYGNNHMNGSYGRRDDDMHSFHCGGGGGGRFGLDMGSGDYGNESRHSG-----GR 120
            +N+S+ G+      Y R  DDM         G R G  M SGDYGN S H G     G 
Sbjct: 61  ANNFSSCGSM----GYARDQDDM---------GSRCGFGMSSGDYGNGSGHYGHSHGHGH 120

Query: 121 GNGN------SQYGMRMALPEDYYDREITEEEFERLLDFAEQSHNNNSRMY 161
           G+G+      S YGM M   +DY D EI+EEEFE+LLD+AEQ    N RMY
Sbjct: 121 GHGHSHSHGESHYGMSMGHVDDYADHEISEEEFEKLLDYAEQC---NVRMY 151

[Close]

BLAST of CSPI02G19220 vs. NCBI nr
Match: KAG6598378.1 (hypothetical protein SDJN03_08156, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 63.2 bits (152), Expect = 2.4e-06
Identity = 60/162 (37.04%), Postives = 82/162 (50.62%), Query Frame = 0


Query: 1   MAFRSVNNLQFWKDDMRRAYREKVGSSRRRRIKIRDIIDVLEIVGPIIPHFFGSNSLSAG 60
           MA RSV+NL+  +DD+   YR     SRR  +KIRDII +++I+GP++PHFF        
Sbjct: 1   MACRSVDNLR-CRDDLMNVYRANAHRSRRGSVKIRDIIGIIKILGPVVPHFFERR----- 60

Query: 61  PDNYSNYGNNHMNGSYGRRDDDMHSFHCGGGGGGRFGLDMGSGDYGNESRHSGG--RGNG 120
             N +N     +  ++      M      G       + M +        H  G    +G
Sbjct: 61  --NGANV-TLVVVAAWVMLVTRMTWVPALGLVWLLVIMAMVAATMATAHGHGHGHSHSHG 120

Query: 121 NSQYGMRMALPEDYYDREITEEEFERLLDFAEQSHNNNSRMY 161
            S YGM M   +DY D EI+EEEFERLLD+AEQ    N +MY
Sbjct: 121 ESHYGMSMGHVDDYADHEISEEEFERLLDYAEQC---NVKMY 150

The following BLAST results are available for this feature:

BLAST of CSPI02G19220 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI02G19220 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LKW7	2.7e-83	98.75	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G359890 PE=4 SV=1	[more]
A0A6J1HD14	1.4e-23	48.50	zinc transporter 7-like OS=Cucurbita moschata OX=3662 GN=LOC111462856 PE=4 SV=1	[more]

BLAST of CSPI02G19220 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN62520.1	5.5e-83	98.75	hypothetical protein Csa_022281 [Cucumis sativus]	[more]
XP_022962401.1	2.9e-23	48.50	zinc transporter 7-like [Cucurbita moschata]	[more]
KAG6598377.1	7.0e-22	47.90	hypothetical protein SDJN03_08155, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023545419.1	4.6e-21	46.78	zinc transporter 7-A-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023545420....	[more]
KAG6598378.1	2.4e-06	37.04	hypothetical protein SDJN03_08156, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of CSPI02G19220 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 103..123

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI02G19220.1	CSPI02G19220.1	mRNA