CSPI02G19010 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI02G19010
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	transcription factor HEC3-like
Location	Chr2: 17398632 .. 17399645 (+)
RNA-Seq Expression	CSPI02G19010
Synteny	CSPI02G19010

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AATTAATTGAGAGAGGGATTTAGTGATGGATATTGAGGAGATGGGAAAGTTTGGAGAGAATTTTGAATGTAATGAAATTGCAACTAGTTTGGATTTTGGTTTTGGTAGTTCCAATATTACTTCCACTTCACATCCTATTTTTCCGTCTTTTAATAATATCCCACCAACCACTCTTTCTATGAATAACGCCACTCACGCTGTTGCACCGCCGTCTTTTCCGCCCTATTCCGCCGCTGCCCGGTGGAGATCCCATTTTCCAGCCACCCGAAATTCCCGCATGGTATGTATCATATATAACTCTTGTATACTTTGAGTACTTTTTAATCACTTTTGGTACTGTATAACTAAATAACCTAATATTCCATGGAGTGAGGATTTGTTTGATTTTTAGTTCTTTGTTTTTCACGTTTATGTTAAAAGTCTTAGCATTTCTAATTAAATTTTAACGACAAAACATATAGAAGTAAGTGTAGTATTTTGTAAAATGAAGGTAGAAATTTAAAAAATAGGAGTGAGGGTTAGTGGCCGATTTATGAAAATGTTTTTAAGAAGGCAGGGGAGGAGGAAGTGGAAGGATCAGAATCAGAATCAATGGGGGGAGGGATGAGAGAGATGATATACAGAATAGCAGCAATGCAGCCAATAGAGATAGACCCAGAAGCAGTGAAGGCACCAAAGCGACGGAATGTTAAGATTTCAAAAGATCCACAGAGCGTAGCGGCAAGGCATAGACGAGAGAGAATTAGCGAAAGAATCAGAATTCTTCAAAGAATAGTCCCAGGTGGCACCAAAATGGACACCGCTTCCATGTTAGACGAAGCCATTCATTACCTTAAGTTTTTGAAAAACCAACTCCATTCACTCCAAATCGCCGCCGCGTCCTCCTCCTCCTCCTCCTCATCCTCCGCCTACGCCTTTCCCACCATCGCTCATTATAATAATAAACAACAACACTTGATCCACTTTCCTCAATTGCCAACCCATCCACATCACCACCTGAACCAAGATGCCTGA

mRNA sequence

AATTAATTGAGAGAGGGATTTAGTGATGGATATTGAGGAGATGGGAAAGTTTGGAGAGAATTTTGAATGTAATGAAATTGCAACTAGTTTGGATTTTGGTTTTGGTAGTTCCAATATTACTTCCACTTCACATCCTATTTTTCCGTCTTTTAATAATATCCCACCAACCACTCTTTCTATGAATAACGCCACTCACGCTGTTGCACCGCCGTCTTTTCCGCCCTATTCCGCCGCTGCCCGGTGGAGATCCCATTTTCCAGCCACCCGAAATTCCCGCATGAAGGCAGGGGAGGAGGAAGTGGAAGGATCAGAATCAGAATCAATGGGGGGAGGGATGAGAGAGATGATATACAGAATAGCAGCAATGCAGCCAATAGAGATAGACCCAGAAGCAGTGAAGGCACCAAAGCGACGGAATGTTAAGATTTCAAAAGATCCACAGAGCGTAGCGGCAAGGCATAGACGAGAGAGAATTAGCGAAAGAATCAGAATTCTTCAAAGAATAGTCCCAGGTGGCACCAAAATGGACACCGCTTCCATGTTAGACGAAGCCATTCATTACCTTAAGTTTTTGAAAAACCAACTCCATTCACTCCAAATCGCCGCCGCGTCCTCCTCCTCCTCCTCCTCATCCTCCGCCTACGCCTTTCCCACCATCGCTCATTATAATAATAAACAACAACACTTGATCCACTTTCCTCAATTGCCAACCCATCCACATCACCACCTGAACCAAGATGCCTGA

Coding sequence (CDS)

ATGGATATTGAGGAGATGGGAAAGTTTGGAGAGAATTTTGAATGTAATGAAATTGCAACTAGTTTGGATTTTGGTTTTGGTAGTTCCAATATTACTTCCACTTCACATCCTATTTTTCCGTCTTTTAATAATATCCCACCAACCACTCTTTCTATGAATAACGCCACTCACGCTGTTGCACCGCCGTCTTTTCCGCCCTATTCCGCCGCTGCCCGGTGGAGATCCCATTTTCCAGCCACCCGAAATTCCCGCATGAAGGCAGGGGAGGAGGAAGTGGAAGGATCAGAATCAGAATCAATGGGGGGAGGGATGAGAGAGATGATATACAGAATAGCAGCAATGCAGCCAATAGAGATAGACCCAGAAGCAGTGAAGGCACCAAAGCGACGGAATGTTAAGATTTCAAAAGATCCACAGAGCGTAGCGGCAAGGCATAGACGAGAGAGAATTAGCGAAAGAATCAGAATTCTTCAAAGAATAGTCCCAGGTGGCACCAAAATGGACACCGCTTCCATGTTAGACGAAGCCATTCATTACCTTAAGTTTTTGAAAAACCAACTCCATTCACTCCAAATCGCCGCCGCGTCCTCCTCCTCCTCCTCCTCATCCTCCGCCTACGCCTTTCCCACCATCGCTCATTATAATAATAAACAACAACACTTGATCCACTTTCCTCAATTGCCAACCCATCCACATCACCACCTGAACCAAGATGCCTGA

Protein sequence

MDIEEMGKFGENFECNEIATSLDFGFGSSNITSTSHPIFPSFNNIPPTTLSMNNATHAVAPPSFPPYSAAARWRSHFPATRNSRMKAGEEEVEGSESESMGGGMREMIYRIAAMQPIEIDPEAVKAPKRRNVKISKDPQSVAARHRRERISERIRILQRIVPGGTKMDTASMLDEAIHYLKFLKNQLHSLQIAAASSSSSSSSSAYAFPTIAHYNNKQQHLIHFPQLPTHPHHHLNQDA*

Homology

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BLAST of CSPI02G19010 vs. ExPASy Swiss-Prot
Match: Q9FHA7 (Transcription factor HEC1 OS=Arabidopsis thaliana OX=3702 GN=HEC1 PE=1 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 6.0e-36
Identity = 77/88 (87.50%), Postives = 83/88 (94.32%), Query Frame = 0


Query: 104 MREMIYRIAAMQPIEIDPEAVKAPKRRNVKISKDPQSVAARHRRERISERIRILQRIVPG 163
           MREMI+RIA MQPI IDPEAVK PKRRNV+ISKDPQSVAARHRRERISERIRILQR+VPG
Sbjct: 98  MREMIFRIAVMQPIHIDPEAVKPPKRRNVRISKDPQSVAARHRRERISERIRILQRLVPG 157

Query: 164 GTKMDTASMLDEAIHYLKFLKNQLHSLQ 192
           GTKMDTASMLDEAIHY+KFLK Q+ SL+
Sbjct: 158 GTKMDTASMLDEAIHYVKFLKKQVQSLE 185

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BLAST of CSPI02G19010 vs. ExPASy Swiss-Prot
Match: Q9LXD8 (Transcription factor HEC3 OS=Arabidopsis thaliana OX=3702 GN=HEC3 PE=1 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 1.2e-33
Identity = 82/133 (61.65%), Postives = 100/133 (75.19%), Query Frame = 0


Query: 64  FPPYSAAARWRSHFPATRNS----RMKAGEEEVEGSESESMG--GGMREMIYRIAAMQPI 123
           F P+S+     SHFP   +S     + +G++E +  E E +   G M+EM+Y+IAAMQ +
Sbjct: 54  FNPFSS-----SHFPPLSSSLTTTTLLSGDQEDDEDEEEPLEELGAMKEMMYKIAAMQSV 113

Query: 124 EIDPEAVKAPKRRNVKISKDPQSVAARHRRERISERIRILQRIVPGGTKMDTASMLDEAI 183
           +IDP  VK PKRRNV+IS DPQSVAARHRRERISERIRILQR+VPGGTKMDTASMLDEAI
Sbjct: 114 DIDPATVKKPKRRNVRISDDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAI 173

Query: 184 HYLKFLKNQLHSL 191
            Y+KFLK Q+  L
Sbjct: 174 RYVKFLKRQIRLL 181

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BLAST of CSPI02G19010 vs. ExPASy Swiss-Prot
Match: Q9SND4 (Transcription factor HEC2 OS=Arabidopsis thaliana OX=3702 GN=HEC2 PE=1 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 1.4e-32
Identity = 95/183 (51.91%), Postives = 117/183 (63.93%), Query Frame = 0


Query: 26  FGSSNITSTSHPIFP-SFNNIPPTTLSMNNATHAVAP--PSFPPYSAAARWRSHFPATRN 85
           F +SN     H I   S +N  P      N TH+  P   + P +     +R + P+  +
Sbjct: 22  FSNSNPNPNPHNIMMLSESNTHPFFF---NPTHSHLPFDQTMPHHQPGLNFR-YAPSPSS 81

Query: 86  SRMKAGEEEVEGSESESMGGGMREMIYRIAAMQPIEIDPEAVKAPKRRNVKISKDPQSVA 145
           S      E+  G    +    MREMI+RIA MQPI IDPE+VK PKR+NV+ISKDPQSVA
Sbjct: 82  SL----PEKRGGCSDNANMAAMREMIFRIAVMQPIHIDPESVKPPKRKNVRISKDPQSVA 141

Query: 146 ARHRRERISERIRILQRIVPGGTKMDTASMLDEAIHYLKFLKNQLHSLQIAAASSSSSSS 205
           ARHRRERISERIRILQR+VPGGTKMDTASMLDEAIHY+KFLK Q+ SL+  A  +    +
Sbjct: 142 ARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQSLEEHAVVNGGGMT 196

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BLAST of CSPI02G19010 vs. ExPASy Swiss-Prot
Match: O81313 (Transcription factor IND OS=Arabidopsis thaliana OX=3702 GN=IND PE=1 SV=3)

HSP 1 Score: 119.0 bits (297), Expect = 7.3e-26
Identity = 69/126 (54.76%), Postives = 85/126 (67.46%), Query Frame = 0


Query: 93  EGSESESMGGGMREMIYRIAAMQPIEIDPEAVKAPKRRNVKISKDPQSVAARHRRERISE 152
           E  E +     M+EM Y IA MQP++IDP  V  P RRNV+IS DPQ+V AR RRERISE
Sbjct: 77  EDEEYDEDMDAMKEMQYMIAVMQPVDIDPATVPKPNRRNVRISDDPQTVVARRRRERISE 136

Query: 153 RIRILQRIVPGGTKMDTASMLDEAIHYLKFLKNQLHSLQIAAASSSSSSSSSAYAFPTIA 212
           +IRIL+RIVPGG KMDTASMLDEAI Y KFLK Q+  LQ  +   +  ++ S      + 
Sbjct: 137 KIRILKRIVPGGAKMDTASMLDEAIRYTKFLKRQVRILQPHSQIGAPMANPS-----YLC 196

Query: 213 HYNNKQ 219
           +Y+N Q
Sbjct: 197 YYHNSQ 197

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BLAST of CSPI02G19010 vs. ExPASy Swiss-Prot
Match: Q8S3D2 (Transcription factor bHLH87 OS=Arabidopsis thaliana OX=3702 GN=BHLH87 PE=1 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 4.7e-25
Identity = 70/130 (53.85%), Postives = 88/130 (67.69%), Query Frame = 0


Query: 104 MREMIYRIAAMQPIEIDPEAVKAPKRRNVKISKDPQSVAARHRRERISERIRILQRIVPG 163
           M+EMIYR AA +P+    E V+ PKR+NVKIS DPQ+VAAR RRERISE+IR+LQ +VPG
Sbjct: 245 MKEMIYRAAAFRPVNFGLEIVEKPKRKNVKISTDPQTVAARQRRERISEKIRVLQTLVPG 304

Query: 164 GTKMDTASMLDEAIHYLKFLKNQLHSLQ-------IAAASSSSSSSSSAYAFPTIAHYNN 223
           GTKMDTASMLDEA +YLKFL+ Q+ +L+           S SS+ +S     P+     N
Sbjct: 305 GTKMDTASMLDEAANYLKFLRAQVKALENLRPKLDQTNLSFSSAPTSFPLFHPSFLPLQN 364

Query: 224 KQQHLIHFPQ 227
             Q  IH P+
Sbjct: 365 PNQ--IHHPE 372

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BLAST of CSPI02G19010 vs. ExPASy TrEMBL
Match: A0A0A0LRA8 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G357190 PE=4 SV=1)

HSP 1 Score: 459.9 bits (1182), Expect = 6.4e-126
Identity = 239/240 (99.58%), Postives = 239/240 (99.58%), Query Frame = 0


Query: 1   MDIEEMGKFGENFECNEIATSLDFGFGSSNITSTSHPIFPSFNNIPPTTLSMNNATHAVA 60
           MDIEEMGKFGENFECNEIATSLDFGFGSSNITSTSHPIFPSFNNIPPTTLSMNNATHAVA
Sbjct: 1   MDIEEMGKFGENFECNEIATSLDFGFGSSNITSTSHPIFPSFNNIPPTTLSMNNATHAVA 60

Query: 61  PPSFPPYSAAARWRSHFPATRNSRMKAGEEEVEGSESESMGGGMREMIYRIAAMQPIEID 120
           PPSFPPYSAAARWRSHFPATRNSRMKAGEEEVEGSESESMGGGMREMIYRIAAMQPIEID
Sbjct: 61  PPSFPPYSAAARWRSHFPATRNSRMKAGEEEVEGSESESMGGGMREMIYRIAAMQPIEID 120

Query: 121 PEAVKAPKRRNVKISKDPQSVAARHRRERISERIRILQRIVPGGTKMDTASMLDEAIHYL 180
           PEAVKAPKRRNVKISKDPQSVAARHRRERISERIRILQRIVPGGTKMDTASMLDEAIHYL
Sbjct: 121 PEAVKAPKRRNVKISKDPQSVAARHRRERISERIRILQRIVPGGTKMDTASMLDEAIHYL 180

Query: 181 KFLKNQLHSLQIAAA-SSSSSSSSSAYAFPTIAHYNNKQQHLIHFPQLPTHPHHHLNQDA 240
           KFLKNQLHSLQIAAA SSSSSSSSSAYAFPTIAHYNNKQQHLIHFPQLPTHPHHHLNQDA
Sbjct: 181 KFLKNQLHSLQIAAASSSSSSSSSSAYAFPTIAHYNNKQQHLIHFPQLPTHPHHHLNQDA 240

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BLAST of CSPI02G19010 vs. ExPASy TrEMBL
Match: A0A1S3BA85 (transcription factor HEC3-like OS=Cucumis melo OX=3656 GN=LOC103487880 PE=4 SV=1)

HSP 1 Score: 415.6 bits (1067), Expect = 1.4e-112
Identity = 221/239 (92.47%), Postives = 224/239 (93.72%), Query Frame = 0


Query: 1   MDIEEMGKFGENFECNEIATSLDFGFGSSNITSTSHPIFPSFNNIPPTTLSMNNATHAVA 60
           MDIEEMGKFGENFE NEIAT+LDFGFGSSNI STSH IFPSFNNIPPTTLSMNNATH VA
Sbjct: 1   MDIEEMGKFGENFEYNEIATTLDFGFGSSNIASTSHLIFPSFNNIPPTTLSMNNATHPVA 60

Query: 61  PPSFPPYSAAARWRSHFPATRNSRMKAGEEEVEGSESESMGGGMREMIYRIAAMQPIEID 120
           PPSFPPYSAAARWRSHFPATRNS    GEEEVEGSESESMGGGMREMIYRIAAMQPIEID
Sbjct: 61  PPSFPPYSAAARWRSHFPATRNSG-TTGEEEVEGSESESMGGGMREMIYRIAAMQPIEID 120

Query: 121 PEAVKAPKRRNVKISKDPQSVAARHRRERISERIRILQRIVPGGTKMDTASMLDEAIHYL 180
           PEAVKAPKRRNVKISKDPQSVAARHRRERISERIRILQRIVPGGTKMDTASMLDEAIHYL
Sbjct: 121 PEAVKAPKRRNVKISKDPQSVAARHRRERISERIRILQRIVPGGTKMDTASMLDEAIHYL 180

Query: 181 KFLKNQLHSLQIAAASSSSSSSSSAYAFPTIAHYNNKQQHLIHFPQLPTHPHHHLNQDA 240
           KFLKNQLHSLQIAAA    SSSSSAY FPT+AHYNNK QHLIHFPQ PTHPHHHL+QDA
Sbjct: 181 KFLKNQLHSLQIAAA----SSSSSAYVFPTVAHYNNK-QHLIHFPQFPTHPHHHLDQDA 233

[Close]

BLAST of CSPI02G19010 vs. ExPASy TrEMBL
Match: A0A5A7V0Q5 (Transcription factor HEC3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G00430 PE=4 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 5.0e-70
Identity = 152/178 (85.39%), Postives = 156/178 (87.64%), Query Frame = 0


Query: 62  PSFPPYSAAARWRSHFPATRNSRMKAGEEEVEGSESESMGGGMREMIYRIAAMQPIEIDP 121
           P F P +  AR  +  P       K GEEEVEGSESESMGGGMREMIYRIAAMQPIEIDP
Sbjct: 23  PIFQPPAIPARISNLRPIYEYVLEKTGEEEVEGSESESMGGGMREMIYRIAAMQPIEIDP 82

Query: 122 EAVKAPKRRNVKISKDPQSVAARHRRERISERIRILQRIVPGGTKMDTASMLDEAIHYLK 181
           EAVKAPKRRNVKISKDPQSVAARHRRERISERIRILQRIVPGGTKMDTASMLDEAIHYLK
Sbjct: 83  EAVKAPKRRNVKISKDPQSVAARHRRERISERIRILQRIVPGGTKMDTASMLDEAIHYLK 142

Query: 182 FLKNQLHSLQIAAASSSSSSSSSAYAFPTIAHYNNKQQHLIHFPQLPTHPHHHLNQDA 240
           FLKNQLHSLQIAAA  SSSSSSSAY FPT+AHYNNK QHLIHFPQ PTHPHHHL+QDA
Sbjct: 143 FLKNQLHSLQIAAA--SSSSSSSAYVFPTVAHYNNK-QHLIHFPQFPTHPHHHLDQDA 197

[Close]

BLAST of CSPI02G19010 vs. ExPASy TrEMBL
Match: A0A6J1KA10 (transcription factor HEC2-like OS=Cucurbita maxima OX=3661 GN=LOC111492009 PE=4 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 2.0e-50
Identity = 135/230 (58.70%), Postives = 153/230 (66.52%), Query Frame = 0


Query: 3   IEEMGKFGENFECNEIATSLDFGFGSSNITSTS------HPIFPSFNNIPPTTLSMNNAT 62
           + +M  F E FE  ++  S  F FGSSNI +TS       PI PS+     +T SMNNAT
Sbjct: 4   LTQMENFSEYFEFTKLPAS-PFSFGSSNIGATSIRFQNPTPILPSY--ALSSTASMNNAT 63

Query: 63  HAVAPPSFPPYSAAARWRSHFPATRNSRMKAGEEEVEGSESESMGGGMREMIYRIAAMQP 122
           H +APP  PP+S+A        AT NS  K         + +SM G MREMIYRIAAMQP
Sbjct: 64  HPLAPPCLPPHSSA--------ATPNSHTK--------QQQDSM-GAMREMIYRIAAMQP 123

Query: 123 IEIDPEAVKAPKRRNVKISKDPQSVAARHRRERISERIRILQRIVPGGTKMDTASMLDEA 182
           I+IDPEAVK PKRRNVKISKDPQSVAARHRRERISERIRILQRIVPGGTKMDTASMLDEA
Sbjct: 124 IQIDPEAVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRIVPGGTKMDTASMLDEA 183

Query: 183 IHYLKFLKNQLHSLQIAAASSSSSSSSSAYAFPTIAHYNNKQQHLIHFPQ 227
           IHY+KFLKNQ+  LQIAA    ++  SSA+ FP             HF Q
Sbjct: 184 IHYVKFLKNQVQCLQIAA----NNRPSSAFGFPAAMSAGGSNYKQFHFAQ 209

[Close]

BLAST of CSPI02G19010 vs. ExPASy TrEMBL
Match: A0A6J1HET7 (transcription factor HEC2-like OS=Cucurbita moschata OX=3662 GN=LOC111462825 PE=4 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 1.1e-45
Identity = 126/224 (56.25%), Postives = 145/224 (64.73%), Query Frame = 0


Query: 3   IEEMGKFGENFECNEIATSLDFGFGSSNITSTSHPIFPSFNNIPPTTLSMNNATHAVAPP 62
           + +M  F E FE  +  +S      S    + + PI PS+     +T SMNNATH +APP
Sbjct: 4   LTQMENFSEFFEFTDFGSST-----SHRFQNPTPPILPSY--ALSSTASMNNATHPLAPP 63

Query: 63  SFPPYSAAARWRSHFPATRNSRMKAGEEEVEGSESESMGGGMREMIYRIAAMQPIEIDPE 122
             PP+S A        AT NS  K         + +SM G MREMIYRIAAMQPI+IDPE
Sbjct: 64  CPPPHSPA--------ATPNSHTK--------QQQDSM-GAMREMIYRIAAMQPIQIDPE 123

Query: 123 AVKAPKRRNVKISKDPQSVAARHRRERISERIRILQRIVPGGTKMDTASMLDEAIHYLKF 182
           AVK PKRRNVKISKDPQSVAARHRRERISERIRILQRIVPGGTKMDTASMLDEAIHY+KF
Sbjct: 124 AVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRIVPGGTKMDTASMLDEAIHYVKF 183

Query: 183 LKNQLHSLQIAAASSSSSSSSSAYAFPTIAHYNNKQQHLIHFPQ 227
           LK+Q+ SLQIAA    ++  SSA+ FP              F Q
Sbjct: 184 LKSQVQSLQIAA----NNRPSSAFRFPAAMSAGGSNYKQFQFAQ 199

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BLAST of CSPI02G19010 vs. NCBI nr
Match: XP_011650182.1 (transcription factor HEC3 [Cucumis sativus] >KAE8652076.1 hypothetical protein Csa_018561 [Cucumis sativus])

HSP 1 Score: 453.4 bits (1165), Expect = 1.2e-123
Identity = 238/240 (99.17%), Postives = 238/240 (99.17%), Query Frame = 0


Query: 1   MDIEEMGKFGENFECNEIATSLDFGFGSSNITSTSHPIFPSFNNIPPTTLSMNNATHAVA 60
           MDIEEMGKFGENFECNEIATSLDFGFGSSNITSTSHPIFPSFNNIPPTTLSMNNATHAVA
Sbjct: 1   MDIEEMGKFGENFECNEIATSLDFGFGSSNITSTSHPIFPSFNNIPPTTLSMNNATHAVA 60

Query: 61  PPSFPPYSAAARWRSHFPATRNSRMKAGEEEVEGSESESMGGGMREMIYRIAAMQPIEID 120
           PPSFPPYSAAARWRSHFPATRNSRM AGEEEVEGSESESMGGGMREMIYRIAAMQPIEID
Sbjct: 61  PPSFPPYSAAARWRSHFPATRNSRM-AGEEEVEGSESESMGGGMREMIYRIAAMQPIEID 120

Query: 121 PEAVKAPKRRNVKISKDPQSVAARHRRERISERIRILQRIVPGGTKMDTASMLDEAIHYL 180
           PEAVKAPKRRNVKISKDPQSVAARHRRERISERIRILQRIVPGGTKMDTASMLDEAIHYL
Sbjct: 121 PEAVKAPKRRNVKISKDPQSVAARHRRERISERIRILQRIVPGGTKMDTASMLDEAIHYL 180

Query: 181 KFLKNQLHSLQIAAA-SSSSSSSSSAYAFPTIAHYNNKQQHLIHFPQLPTHPHHHLNQDA 240
           KFLKNQLHSLQIAAA SSSSSSSSSAYAFPTIAHYNNKQQHLIHFPQLPTHPHHHLNQDA
Sbjct: 181 KFLKNQLHSLQIAAASSSSSSSSSSAYAFPTIAHYNNKQQHLIHFPQLPTHPHHHLNQDA 239

[Close]

BLAST of CSPI02G19010 vs. NCBI nr
Match: XP_008444609.1 (PREDICTED: transcription factor HEC3-like [Cucumis melo])

HSP 1 Score: 415.6 bits (1067), Expect = 2.9e-112
Identity = 221/239 (92.47%), Postives = 224/239 (93.72%), Query Frame = 0


Query: 1   MDIEEMGKFGENFECNEIATSLDFGFGSSNITSTSHPIFPSFNNIPPTTLSMNNATHAVA 60
           MDIEEMGKFGENFE NEIAT+LDFGFGSSNI STSH IFPSFNNIPPTTLSMNNATH VA
Sbjct: 1   MDIEEMGKFGENFEYNEIATTLDFGFGSSNIASTSHLIFPSFNNIPPTTLSMNNATHPVA 60

Query: 61  PPSFPPYSAAARWRSHFPATRNSRMKAGEEEVEGSESESMGGGMREMIYRIAAMQPIEID 120
           PPSFPPYSAAARWRSHFPATRNS    GEEEVEGSESESMGGGMREMIYRIAAMQPIEID
Sbjct: 61  PPSFPPYSAAARWRSHFPATRNSG-TTGEEEVEGSESESMGGGMREMIYRIAAMQPIEID 120

Query: 121 PEAVKAPKRRNVKISKDPQSVAARHRRERISERIRILQRIVPGGTKMDTASMLDEAIHYL 180
           PEAVKAPKRRNVKISKDPQSVAARHRRERISERIRILQRIVPGGTKMDTASMLDEAIHYL
Sbjct: 121 PEAVKAPKRRNVKISKDPQSVAARHRRERISERIRILQRIVPGGTKMDTASMLDEAIHYL 180

Query: 181 KFLKNQLHSLQIAAASSSSSSSSSAYAFPTIAHYNNKQQHLIHFPQLPTHPHHHLNQDA 240
           KFLKNQLHSLQIAAA    SSSSSAY FPT+AHYNNK QHLIHFPQ PTHPHHHL+QDA
Sbjct: 181 KFLKNQLHSLQIAAA----SSSSSAYVFPTVAHYNNK-QHLIHFPQFPTHPHHHLDQDA 233

[Close]

BLAST of CSPI02G19010 vs. NCBI nr
Match: KAA0060910.1 (transcription factor HEC3-like [Cucumis melo var. makuwa])

HSP 1 Score: 274.2 bits (700), Expect = 1.0e-69
Identity = 152/178 (85.39%), Postives = 156/178 (87.64%), Query Frame = 0


Query: 62  PSFPPYSAAARWRSHFPATRNSRMKAGEEEVEGSESESMGGGMREMIYRIAAMQPIEIDP 121
           P F P +  AR  +  P       K GEEEVEGSESESMGGGMREMIYRIAAMQPIEIDP
Sbjct: 23  PIFQPPAIPARISNLRPIYEYVLEKTGEEEVEGSESESMGGGMREMIYRIAAMQPIEIDP 82

Query: 122 EAVKAPKRRNVKISKDPQSVAARHRRERISERIRILQRIVPGGTKMDTASMLDEAIHYLK 181
           EAVKAPKRRNVKISKDPQSVAARHRRERISERIRILQRIVPGGTKMDTASMLDEAIHYLK
Sbjct: 83  EAVKAPKRRNVKISKDPQSVAARHRRERISERIRILQRIVPGGTKMDTASMLDEAIHYLK 142

Query: 182 FLKNQLHSLQIAAASSSSSSSSSAYAFPTIAHYNNKQQHLIHFPQLPTHPHHHLNQDA 240
           FLKNQLHSLQIAAA  SSSSSSSAY FPT+AHYNNK QHLIHFPQ PTHPHHHL+QDA
Sbjct: 143 FLKNQLHSLQIAAA--SSSSSSSAYVFPTVAHYNNK-QHLIHFPQFPTHPHHHLDQDA 197

[Close]

BLAST of CSPI02G19010 vs. NCBI nr
Match: XP_038886669.1 (transcription factor HEC2-like [Benincasa hispida])

HSP 1 Score: 270.0 bits (689), Expect = 2.0e-68
Identity = 170/244 (69.67%), Postives = 184/244 (75.41%), Query Frame = 0


Query: 1   MDIE-EMGKF--GENFECNEIATSLDFGFGSSNI-----TSTSHPIFPSFNNI-PPTTLS 60
           M+IE +MG+F   EN E +E+   L F FGSSNI     TSTS+PIF SFNN+ PP+T S
Sbjct: 1   MNIEDDMGEFAVAENLELSEVG-GLAFAFGSSNIGVSSSTSTSYPIFSSFNNLPPPSTFS 60

Query: 61  MNNATHAVAPPSFPPYSAAARW-RSHFPATRNSRMKAGEEEVEGSESESMGGGMREMIYR 120
           MNN T  VAPPSFPPYS+A RW  SH PAT  S MK GEEE    ESESM GGMREMIYR
Sbjct: 61  MNNPTQPVAPPSFPPYSSAPRWTSSHLPATPISAMK-GEEE----ESESM-GGMREMIYR 120

Query: 121 IAAMQPIEIDPEAVKAPKRRNVKISKDPQSVAARHRRERISERIRILQRIVPGGTKMDTA 180
           +AAMQPIEIDPE VK PKRRNVKISKDPQSVAARHRRERISERIRILQRIVPGGTKMDTA
Sbjct: 121 MAAMQPIEIDPETVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRIVPGGTKMDTA 180

Query: 181 SMLDEAIHYLKFLKNQLHSLQIAAASSSSSSSSSAYAFPTI--AHYNNKQQHLIHFPQLP 233
           SMLDEAIHYLKFLKNQLHSLQIAAA++        Y FPT   +      +HL HFPQ  
Sbjct: 181 SMLDEAIHYLKFLKNQLHSLQIAAATT--------YPFPTAMSSGGTTNYKHLFHFPQPS 229

[Close]

BLAST of CSPI02G19010 vs. NCBI nr
Match: XP_022996919.1 (transcription factor HEC2-like [Cucurbita maxima])

HSP 1 Score: 209.1 bits (531), Expect = 4.1e-50
Identity = 135/230 (58.70%), Postives = 153/230 (66.52%), Query Frame = 0


Query: 3   IEEMGKFGENFECNEIATSLDFGFGSSNITSTS------HPIFPSFNNIPPTTLSMNNAT 62
           + +M  F E FE  ++  S  F FGSSNI +TS       PI PS+     +T SMNNAT
Sbjct: 4   LTQMENFSEYFEFTKLPAS-PFSFGSSNIGATSIRFQNPTPILPSY--ALSSTASMNNAT 63

Query: 63  HAVAPPSFPPYSAAARWRSHFPATRNSRMKAGEEEVEGSESESMGGGMREMIYRIAAMQP 122
           H +APP  PP+S+A        AT NS  K         + +SM G MREMIYRIAAMQP
Sbjct: 64  HPLAPPCLPPHSSA--------ATPNSHTK--------QQQDSM-GAMREMIYRIAAMQP 123

Query: 123 IEIDPEAVKAPKRRNVKISKDPQSVAARHRRERISERIRILQRIVPGGTKMDTASMLDEA 182
           I+IDPEAVK PKRRNVKISKDPQSVAARHRRERISERIRILQRIVPGGTKMDTASMLDEA
Sbjct: 124 IQIDPEAVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRIVPGGTKMDTASMLDEA 183

Query: 183 IHYLKFLKNQLHSLQIAAASSSSSSSSSAYAFPTIAHYNNKQQHLIHFPQ 227
           IHY+KFLKNQ+  LQIAA    ++  SSA+ FP             HF Q
Sbjct: 184 IHYVKFLKNQVQCLQIAA----NNRPSSAFGFPAAMSAGGSNYKQFHFAQ 209

[Close]

BLAST of CSPI02G19010 vs. TAIR 10
Match: AT5G67060.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 152.5 bits (384), Expect = 4.2e-37
Identity = 77/88 (87.50%), Postives = 83/88 (94.32%), Query Frame = 0


Query: 104 MREMIYRIAAMQPIEIDPEAVKAPKRRNVKISKDPQSVAARHRRERISERIRILQRIVPG 163
           MREMI+RIA MQPI IDPEAVK PKRRNV+ISKDPQSVAARHRRERISERIRILQR+VPG
Sbjct: 98  MREMIFRIAVMQPIHIDPEAVKPPKRRNVRISKDPQSVAARHRRERISERIRILQRLVPG 157

Query: 164 GTKMDTASMLDEAIHYLKFLKNQLHSLQ 192
           GTKMDTASMLDEAIHY+KFLK Q+ SL+
Sbjct: 158 GTKMDTASMLDEAIHYVKFLKKQVQSLE 185

[Close]

BLAST of CSPI02G19010 vs. TAIR 10
Match: AT5G09750.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 144.8 bits (364), Expect = 8.8e-35
Identity = 82/133 (61.65%), Postives = 100/133 (75.19%), Query Frame = 0


Query: 64  FPPYSAAARWRSHFPATRNS----RMKAGEEEVEGSESESMG--GGMREMIYRIAAMQPI 123
           F P+S+     SHFP   +S     + +G++E +  E E +   G M+EM+Y+IAAMQ +
Sbjct: 54  FNPFSS-----SHFPPLSSSLTTTTLLSGDQEDDEDEEEPLEELGAMKEMMYKIAAMQSV 113

Query: 124 EIDPEAVKAPKRRNVKISKDPQSVAARHRRERISERIRILQRIVPGGTKMDTASMLDEAI 183
           +IDP  VK PKRRNV+IS DPQSVAARHRRERISERIRILQR+VPGGTKMDTASMLDEAI
Sbjct: 114 DIDPATVKKPKRRNVRISDDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAI 173

Query: 184 HYLKFLKNQLHSL 191
            Y+KFLK Q+  L
Sbjct: 174 RYVKFLKRQIRLL 181

[Close]

BLAST of CSPI02G19010 vs. TAIR 10
Match: AT3G50330.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 141.4 bits (355), Expect = 9.8e-34
Identity = 95/183 (51.91%), Postives = 117/183 (63.93%), Query Frame = 0


Query: 26  FGSSNITSTSHPIFP-SFNNIPPTTLSMNNATHAVAP--PSFPPYSAAARWRSHFPATRN 85
           F +SN     H I   S +N  P      N TH+  P   + P +     +R + P+  +
Sbjct: 22  FSNSNPNPNPHNIMMLSESNTHPFFF---NPTHSHLPFDQTMPHHQPGLNFR-YAPSPSS 81

Query: 86  SRMKAGEEEVEGSESESMGGGMREMIYRIAAMQPIEIDPEAVKAPKRRNVKISKDPQSVA 145
           S      E+  G    +    MREMI+RIA MQPI IDPE+VK PKR+NV+ISKDPQSVA
Sbjct: 82  SL----PEKRGGCSDNANMAAMREMIFRIAVMQPIHIDPESVKPPKRKNVRISKDPQSVA 141

Query: 146 ARHRRERISERIRILQRIVPGGTKMDTASMLDEAIHYLKFLKNQLHSLQIAAASSSSSSS 205
           ARHRRERISERIRILQR+VPGGTKMDTASMLDEAIHY+KFLK Q+ SL+  A  +    +
Sbjct: 142 ARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQSLEEHAVVNGGGMT 196

[Close]

BLAST of CSPI02G19010 vs. TAIR 10
Match: AT4G00120.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 119.0 bits (297), Expect = 5.2e-27
Identity = 69/126 (54.76%), Postives = 85/126 (67.46%), Query Frame = 0


Query: 93  EGSESESMGGGMREMIYRIAAMQPIEIDPEAVKAPKRRNVKISKDPQSVAARHRRERISE 152
           E  E +     M+EM Y IA MQP++IDP  V  P RRNV+IS DPQ+V AR RRERISE
Sbjct: 77  EDEEYDEDMDAMKEMQYMIAVMQPVDIDPATVPKPNRRNVRISDDPQTVVARRRRERISE 136

Query: 153 RIRILQRIVPGGTKMDTASMLDEAIHYLKFLKNQLHSLQIAAASSSSSSSSSAYAFPTIA 212
           +IRIL+RIVPGG KMDTASMLDEAI Y KFLK Q+  LQ  +   +  ++ S      + 
Sbjct: 137 KIRILKRIVPGGAKMDTASMLDEAIRYTKFLKRQVRILQPHSQIGAPMANPS-----YLC 196

Query: 213 HYNNKQ 219
           +Y+N Q
Sbjct: 197 YYHNSQ 197

[Close]

BLAST of CSPI02G19010 vs. TAIR 10
Match: AT3G21330.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 116.3 bits (290), Expect = 3.4e-26
Identity = 70/130 (53.85%), Postives = 88/130 (67.69%), Query Frame = 0


Query: 104 MREMIYRIAAMQPIEIDPEAVKAPKRRNVKISKDPQSVAARHRRERISERIRILQRIVPG 163
           M+EMIYR AA +P+    E V+ PKR+NVKIS DPQ+VAAR RRERISE+IR+LQ +VPG
Sbjct: 245 MKEMIYRAAAFRPVNFGLEIVEKPKRKNVKISTDPQTVAARQRRERISEKIRVLQTLVPG 304

Query: 164 GTKMDTASMLDEAIHYLKFLKNQLHSLQ-------IAAASSSSSSSSSAYAFPTIAHYNN 223
           GTKMDTASMLDEA +YLKFL+ Q+ +L+           S SS+ +S     P+     N
Sbjct: 305 GTKMDTASMLDEAANYLKFLRAQVKALENLRPKLDQTNLSFSSAPTSFPLFHPSFLPLQN 364

Query: 224 KQQHLIHFPQ 227
             Q  IH P+
Sbjct: 365 PNQ--IHHPE 372

The following BLAST results are available for this feature:

BLAST of CSPI02G19010 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FHA7	6.0e-36	87.50	Transcription factor HEC1 OS=Arabidopsis thaliana OX=3702 GN=HEC1 PE=1 SV=1	[more]
Q9LXD8	1.2e-33	61.65	Transcription factor HEC3 OS=Arabidopsis thaliana OX=3702 GN=HEC3 PE=1 SV=1	[more]
Q9SND4	1.4e-32	51.91	Transcription factor HEC2 OS=Arabidopsis thaliana OX=3702 GN=HEC2 PE=1 SV=1	[more]
O81313	7.3e-26	54.76	Transcription factor IND OS=Arabidopsis thaliana OX=3702 GN=IND PE=1 SV=3	[more]
Q8S3D2	4.7e-25	53.85	Transcription factor bHLH87 OS=Arabidopsis thaliana OX=3702 GN=BHLH87 PE=1 SV=1	[more]

BLAST of CSPI02G19010 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LRA8	6.4e-126	99.58	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G357190 PE=4 S...	[more]
A0A1S3BA85	1.4e-112	92.47	transcription factor HEC3-like OS=Cucumis melo OX=3656 GN=LOC103487880 PE=4 SV=1	[more]
A0A5A7V0Q5	5.0e-70	85.39	Transcription factor HEC3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]
A0A6J1KA10	2.0e-50	58.70	transcription factor HEC2-like OS=Cucurbita maxima OX=3661 GN=LOC111492009 PE=4 ...	[more]
A0A6J1HET7	1.1e-45	56.25	transcription factor HEC2-like OS=Cucurbita moschata OX=3662 GN=LOC111462825 PE=...	[more]

BLAST of CSPI02G19010 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011650182.1	1.2e-123	99.17	transcription factor HEC3 [Cucumis sativus] >KAE8652076.1 hypothetical protein C...	[more]
XP_008444609.1	2.9e-112	92.47	PREDICTED: transcription factor HEC3-like [Cucumis melo]	[more]
KAA0060910.1	1.0e-69	85.39	transcription factor HEC3-like [Cucumis melo var. makuwa]	[more]
XP_038886669.1	2.0e-68	69.67	transcription factor HEC2-like [Benincasa hispida]	[more]
XP_022996919.1	4.1e-50	58.70	transcription factor HEC2-like [Cucurbita maxima]	[more]

BLAST of CSPI02G19010 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G67060.1	4.2e-37	87.50	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G09750.1	8.8e-35	61.65	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G50330.1	9.8e-34	51.91	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT4G00120.1	5.2e-27	54.76	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G21330.1	3.4e-26	53.85	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 140..189 e-value: 2.7E-13 score: 60.2
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 144..183 e-value: 9.7E-7 score: 28.7
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 134..183 score: 15.198898
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 133..203 e-value: 4.5E-11 score: 44.7
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 138..192
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 81..101
None	No IPR available	PANTHER	PTHR45914	TRANSCRIPTION FACTOR HEC3-RELATED	coord: 40..217
None	No IPR available	PANTHER	PTHR45914:SF29	BASIC HELIX-LOOP-HELIX (BHLH)-LIKE PROTEIN	coord: 40..217

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI02G19010.1	CSPI02G19010.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046983	protein dimerization activity