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CSPI02G18950 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTGATGGGTTTCTGTAAAGTATAAAAAGAAAGAGAAAAAAGGAAACGACAAAAAGATTAAGGCGGGAGGGGTGGGATTAAGAAGGAAGACGATAAGTTGAACCTCGGGACGCAGACCAGAAGTCAGCAACTTCACAAAAACACCATTAATGACAATCCTTAATCCTTGTTTTTGCTTTCTACCCAACAAAACTAATCATCCAACGCTAAAAGATAAGACGGAATCCAAGAAAAAGTACACACAAACTCAGACCAATACCATACAAATACATAATTCCTTCCACCCCAAACCGTTTCTGCACACACAGCCAACATACGCAACGTAATCCTTCATTTTTCATCCTTACTTTCAACCCCTTTTGATCCTCAATCATGGCGGATCTCTACGGAACTTCCCCTTCTTCCGATGTTGTGGGTTTGCCCCATGACCCTGAAGATTTCTCTTCTTTCATCAATCACCACCTTCAAACCACTACTTCTTCTGCTTCTTCCCCTTCTTGCGTTTCCTTCAAGAACAAGTTCATGCCCTTGTTGCATTCTCAACCTCCTTGGCACTCTTCGCCGATGTTTTCTCGCCGGCCCGATTCCACCTCTGTTCCCGGTATGTCCTGCATGCTCGATTTTCCCGAGGATCGGCTTCAGTCCAGTCGTGTTTTGAACCACGCTTTGTCGGATTGTAATGTTAGGGATGTGAGATTTGCTGATGCTTCGTATTTGGCTGTGAACTCAACTTGCGGCGGCGTGAAATTGTCGGATCCTGGTGACTTTCTCAAAGAAAGTTCCGACAACGCCTTTTCTTCCTCCGGCGCTGTTGATTCCGATACGAATGCACCGTTGAAGAGAAGGGGTCTTTCGTCTGAAAATGATCTTGGGGATTTCAGTTGCGATAGCGAGGTAACTTCCTGTTTCCTCAAATTTCACCGTTTGAAACTTTTGCTTATCTTGAGTTAATTCGATTCTCTCAGGGTGGGGATTTGCCTGAAGTTCCATCTAGTACTAATCTGCCTCGAAATTCATCGAAGAGAAGTAGAAGCGCTGAGGTCCATAATATGTCGGAGAAGGTCAGTTTCATATTGGGTCCCCGATTTCTAAGCATTCTTGTCTTTAAGTTTAGACTAAGAGCGATTGATTGCTGATATTTTTGCTAATGGTTTCGGTGAGTGGGCCAGAGACGAAGAAGGAGGATCAATGAGAAAATGAAAGCTCTTCAGAACTTAATTCCCAATTCAAACAAGGTATATTTGTCAAATTCAAGACTATGGCGGTTTTGATTACTTTTTAAGTATTTAGAGTTACAATCAGATTGTGGTTTGACAGACGGACAAAGCTTCAATGTTGGATGAAGCAATTGAGTATTTGAAGCAGCTTCAACTTCAAGTCCAGGTGGGTGTCCTTTTTTTTTTGTTTTGTTTTGTTTTGTATGGTTATGTGCCTGAGAATTTGATCACGTTTTTTCACTTTTGTTTGCTATGGAATTATCTCTCTTTATACGTGTACTCGTTCATTTTTATTGGTTTCTAATTACAAATAGTCCATGAATTTGGGCCACAGAATCTTATGTGCTGATATATCAAAAAGTAATGTTCCTTTTGTCCTCATGATATGAGTCAAACGTGCCTGCACTTCGATTTCTGGTTGCATTTCAATCAGAGAACTTTGAATATTCAAACAGTTTCATCCTAATTTTATTTCTGGCCAAACCTTACTAGAGAAAAGCCAATTGATAATGAAATTTTTTGAGTCTTGAGTGTTGATTATTTTTCAAACCCATGGTTCTGTAGGAGTTCTGTTACTCATTCTGAGAATTATTGGGACATTTTCAGCTGAAAAAGGCTGAAGATCTCCTCCACCTACCGCCGATTAACACTGTGTGTTTGATTACTTTTCACTCTATCACTATAAGATTATGCTTCGTTTGAGCTTTTCCTAACATAACCAAAATTTTACTTCTTAAGAGAAGATGGTTCACGAAATAGAGGTTTTTTCTTAGCTAACTTACGTTTGAGACAATGATGTCAAAATAATAGATTTCTAGGACCTCATATTCTTTCTTATCACGAATTTGATGGGTGCTTATGAGGAGCAGGAATAATACCTCTCTTGATCATTGTTTTGTCGAAAATTTTCCCTGTTTTAGTTGCTCTTTTTGGGCTATACTAAATTTGATATTGAACTATAAACGAAAACGAAATTACAAGATAATTCAAGAGTCCAAGGTACTTGGACCCTCCGAATCTTGGCAGTACTCTCAGGCCGTAGTAGACTTCACCAAATATTGCCTATCTCCCATCTTCTCCACTCGCTTTATTTACTTAAAACATTCATAACAATCCCTTAATACTCTAATTATTTCCTTAAAACGTTCATAACAATCCCTTAATACTCTAATTATTTACTTAAAACATTCATTTCAAATAATGAGGTTTGGAGCAACTAACAGCTTGTTCCATTTTTTTCTCTCTAGTTGACAGAAATGGTCATAGTTTGATGAACATATTTAAACTTGTTATCAATGACGTTTGGCTTTGCAGATGTTATCAATGAGAAATGGCTTGAGTTTGCAACCAATGTGCTTGCCAGGAATGCTGCAGCCAATTCAACTACCTCAGATGGGGTTGGACTACGATGTAGGAAATGCATTTCTAACATCCCGAAGAGGAATAGATACATCGTCTACTAGGAACGAAGGATGTCCCATGCAATCTACATTCAATCTTACCAACAAATGTAACCTTTCAGATCAGTCAATTGCCATCCCTTCTGTACCAAACACCACAACCTCAGAAACTGCATTCGGTTTTGAACCCACAATTCAGGGTTATGATGGGGAGTTTAACCTGTCCTCCGATTTCAAGGTAACAAACAATATTAACCAGCTTCTTTCTAGGTTAGTGAAATTGGGACCAAATATTTTCTTGGAAATATGCAGGATGGGGAACCAGCCGCACAGTTAGATTGCGCTCAGACGGGGAACGAGTCAACAGACGCTTCTTAGCTGTAGTCCTTTGCAGGATGCTGCTCACTAGAGTATGGCCTTTTTAATGAAGCAATTTCTTTACTTTCCTTGTGGATTTTCAACAACAAACATTATAGAAACTACAAAAAGTTCTATTTTCACACTTACCAGAAAATCTATTGTAGAATAGGTTAACAACATAATCTTGATATTTATGCCTTTGACTCTATGTTTTTAAGAAAAAAAACTTCAAGTATTAGTTAGGCAAACATAGAAATGCAGAAATCTACCTGATCTGCTTTGTTTGAAAAGAAAGAGGATAGAAGCTGCCAAATGTTTTTGGGGAGAAGCAAGAAAAAGAAAAAGAAAAAGAATACGGTGGTCCTTCCTTACCTTTACCAATTAGATGCTCTCTATCTGGACTCATTGATGTGAAGTAGATCAATTATTTTGCCTTGTAATGCTGTCAAGAAATGAAAACAAAAAATATGTTGTCTCTTTGCAGGATATTTTTGAGATAAATACCCATTCATAATATACGATAATATCAATTTAACTTTGTTCATATGCTGTTTGATTTTGGTTTAGATTGAAAACTGACCCAAAATAGGGACAAATTGGGCCAAGTTGATATGAAGCCATTTGGCAGAGGGAATATGTCTCATATGATATAATAACAAATCATATGAAATGATTAAAGATGAATTCGAAAGAAAAAGAAGGGAAAAGAAAAGTTTGGGGGTGCCCTTAAAAAAAGGGGAGGGTCTGAAACT CTGATGGGTTTCTGTAAAGTATAAAAAGAAAGAGAAAAAAGGAAACGACAAAAAGATTAAGGCGGGAGGGGTGGGATTAAGAAGGAAGACGATAAGTTGAACCTCGGGACGCAGACCAGAAGTCAGCAACTTCACAAAAACACCATTAATGACAATCCTTAATCCTTGTTTTTGCTTTCTACCCAACAAAACTAATCATCCAACGCTAAAAGATAAGACGGAATCCAAGAAAAAGTACACACAAACTCAGACCAATACCATACAAATACATAATTCCTTCCACCCCAAACCGTTTCTGCACACACAGCCAACATACGCAACGTAATCCTTCATTTTTCATCCTTACTTTCAACCCCTTTTGATCCTCAATCATGGCGGATCTCTACGGAACTTCCCCTTCTTCCGATGTTGTGGGTTTGCCCCATGACCCTGAAGATTTCTCTTCTTTCATCAATCACCACCTTCAAACCACTACTTCTTCTGCTTCTTCCCCTTCTTGCGTTTCCTTCAAGAACAAGTTCATGCCCTTGTTGCATTCTCAACCTCCTTGGCACTCTTCGCCGATGTTTTCTCGCCGGCCCGATTCCACCTCTGTTCCCGGTATGTCCTGCATGCTCGATTTTCCCGAGGATCGGCTTCAGTCCAGTCGTGTTTTGAACCACGCTTTGTCGGATTGTAATGTTAGGGATGTGAGATTTGCTGATGCTTCGTATTTGGCTGTGAACTCAACTTGCGGCGGCGTGAAATTGTCGGATCCTGGTGACTTTCTCAAAGAAAGTTCCGACAACGCCTTTTCTTCCTCCGGCGCTGTTGATTCCGATACGAATGCACCGTTGAAGAGAAGGGGTCTTTCGTCTGAAAATGATCTTGGGGATTTCAGTTGCGATAGCGAGGGTGGGGATTTGCCTGAAGTTCCATCTAGTACTAATCTGCCTCGAAATTCATCGAAGAGAAGTAGAAGCGCTGAGGTCCATAATATGTCGGAGAAGAGACGAAGAAGGAGGATCAATGAGAAAATGAAAGCTCTTCAGAACTTAATTCCCAATTCAAACAAGACGGACAAAGCTTCAATGTTGGATGAAGCAATTGAGTATTTGAAGCAGCTTCAACTTCAAGTCCAGATGTTATCAATGAGAAATGGCTTGAGTTTGCAACCAATGTGCTTGCCAGGAATGCTGCAGCCAATTCAACTACCTCAGATGGGGTTGGACTACGATGTAGGAAATGCATTTCTAACATCCCGAAGAGGAATAGATACATCGTCTACTAGGAACGAAGGATGTCCCATGCAATCTACATTCAATCTTACCAACAAATGTAACCTTTCAGATCAGTCAATTGCCATCCCTTCTGTACCAAACACCACAACCTCAGAAACTGCATTCGGTTTTGAACCCACAATTCAGGGTTATGATGGGGAGTTTAACCTGTCCTCCGATTTCAAGGATGGGGAACCAGCCGCACAGTTAGATTGCGCTCAGACGGGGAACGAGTCAACAGACGCTTCTTAGCTGTAGTCCTTTGCAGGATGCTGCTCACTAGAGTATGGCCTTTTTAATGAAGCAATTTCTTTACTTTCCTTGTGGATTTTCAACAACAAACATTATAGAAACTACAAAAAGTTCTATTTTCACACTTACCAGAAAATCTATTGTAGAATAGGTTAACAACATAATCTTGATATTTATGCCTTTGACTCTATGTTTTTAAGAAAAAAAACTTCAAGTATTAGTTAGGCAAACATAGAAATGCAGAAATCTACCTGATCTGCTTTGTTTGAAAAGAAAGAGGATAGAAGCTGCCAAATGTTTTTGGGGAGAAGCAAGAAAAAGAAAAAGAAAAAGAATACGGTGGTCCTTCCTTACCTTTACCAATTAGATGCTCTCTATCTGGACTCATTGATGTGAAGTAGATCAATTATTTTGCCTTGTAATGCTGTCAAGAAATGAAAACAAAAAATATGTTGTCTCTTTGCAGGATATTTTTGAGATAAATACCCATTCATAATATACGATAATATCAATTTAACTTTGTTCATATGCTGTTTGATTTTGGTTTAGATTGAAAACTGACCCAAAATAGGGACAAATTGGGCCAAGTTGATATGAAGCCATTTGGCAGAGGGAATATGTCTCATATGATATAATAACAAATCATATGAAATGATTAAAGATGAATTCGAAAGAAAAAGAAGGGAAAAGAAAAGTTTGGGGGTGCCCTTAAAAAAAGGGGAGGGTCTGAAACT ATGGCGGATCTCTACGGAACTTCCCCTTCTTCCGATGTTGTGGGTTTGCCCCATGACCCTGAAGATTTCTCTTCTTTCATCAATCACCACCTTCAAACCACTACTTCTTCTGCTTCTTCCCCTTCTTGCGTTTCCTTCAAGAACAAGTTCATGCCCTTGTTGCATTCTCAACCTCCTTGGCACTCTTCGCCGATGTTTTCTCGCCGGCCCGATTCCACCTCTGTTCCCGGTATGTCCTGCATGCTCGATTTTCCCGAGGATCGGCTTCAGTCCAGTCGTGTTTTGAACCACGCTTTGTCGGATTGTAATGTTAGGGATGTGAGATTTGCTGATGCTTCGTATTTGGCTGTGAACTCAACTTGCGGCGGCGTGAAATTGTCGGATCCTGGTGACTTTCTCAAAGAAAGTTCCGACAACGCCTTTTCTTCCTCCGGCGCTGTTGATTCCGATACGAATGCACCGTTGAAGAGAAGGGGTCTTTCGTCTGAAAATGATCTTGGGGATTTCAGTTGCGATAGCGAGGGTGGGGATTTGCCTGAAGTTCCATCTAGTACTAATCTGCCTCGAAATTCATCGAAGAGAAGTAGAAGCGCTGAGGTCCATAATATGTCGGAGAAGAGACGAAGAAGGAGGATCAATGAGAAAATGAAAGCTCTTCAGAACTTAATTCCCAATTCAAACAAGACGGACAAAGCTTCAATGTTGGATGAAGCAATTGAGTATTTGAAGCAGCTTCAACTTCAAGTCCAGATGTTATCAATGAGAAATGGCTTGAGTTTGCAACCAATGTGCTTGCCAGGAATGCTGCAGCCAATTCAACTACCTCAGATGGGGTTGGACTACGATGTAGGAAATGCATTTCTAACATCCCGAAGAGGAATAGATACATCGTCTACTAGGAACGAAGGATGTCCCATGCAATCTACATTCAATCTTACCAACAAATGTAACCTTTCAGATCAGTCAATTGCCATCCCTTCTGTACCAAACACCACAACCTCAGAAACTGCATTCGGTTTTGAACCCACAATTCAGGGTTATGATGGGGAGTTTAACCTGTCCTCCGATTTCAAGGATGGGGAACCAGCCGCACAGTTAGATTGCGCTCAGACGGGGAACGAGTCAACAGACGCTTCTTAG MADLYGTSPSSDVVGLPHDPEDFSSFINHHLQTTTSSASSPSCVSFKNKFMPLLHSQPPWHSSPMFSRRPDSTSVPGMSCMLDFPEDRLQSSRVLNHALSDCNVRDVRFADASYLAVNSTCGGVKLSDPGDFLKESSDNAFSSSGAVDSDTNAPLKRRGLSSENDLGDFSCDSEGGDLPEVPSSTNLPRNSSKRSRSAEVHNMSEKRRRRRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSMRNGLSLQPMCLPGMLQPIQLPQMGLDYDVGNAFLTSRRGIDTSSTRNEGCPMQSTFNLTNKCNLSDQSIAIPSVPNTTTSETAFGFEPTIQGYDGEFNLSSDFKDGEPAAQLDCAQTGNESTDAS* Homology
BLAST of CSPI02G18950 vs. ExPASy Swiss-Prot
Match: Q9FUA4 (Transcription factor SPATULA OS=Arabidopsis thaliana OX=3702 GN=SPT PE=1 SV=1) HSP 1 Score: 142.5 bits (358), Expect = 9.8e-33 Identity = 127/338 (37.57%), Postives = 171/338 (50.59%), Query Frame = 0
BLAST of CSPI02G18950 vs. ExPASy Swiss-Prot
Match: Q0JNI9 (Transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 15 OS=Oryza sativa subsp. japonica OX=39947 GN=PIL15 PE=1 SV=2) HSP 1 Score: 115.5 bits (288), Expect = 1.3e-24 Identity = 71/121 (58.68%), Postives = 84/121 (69.42%), Query Frame = 0
BLAST of CSPI02G18950 vs. ExPASy Swiss-Prot
Match: Q9FHA2 (Transcription factor ALC OS=Arabidopsis thaliana OX=3702 GN=ALC PE=2 SV=1) HSP 1 Score: 108.6 bits (270), Expect = 1.6e-22 Identity = 61/83 (73.49%), Postives = 69/83 (83.13%), Query Frame = 0
BLAST of CSPI02G18950 vs. ExPASy Swiss-Prot
Match: O80536 (Transcription factor PIF3 OS=Arabidopsis thaliana OX=3702 GN=PIF3 PE=1 SV=1) HSP 1 Score: 106.7 bits (265), Expect = 5.9e-22 Identity = 98/277 (35.38%), Postives = 141/277 (50.90%), Query Frame = 0
BLAST of CSPI02G18950 vs. ExPASy Swiss-Prot
Match: Q6AT90 (Transcription factor APG OS=Oryza sativa subsp. japonica OX=39947 GN=APG PE=1 SV=1) HSP 1 Score: 104.0 bits (258), Expect = 3.8e-21 Identity = 66/126 (52.38%), Postives = 82/126 (65.08%), Query Frame = 0
BLAST of CSPI02G18950 vs. ExPASy TrEMBL
Match: A0A0A0LKR9 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G356640 PE=4 SV=1) HSP 1 Score: 744.6 bits (1921), Expect = 2.1e-211 Identity = 379/379 (100.00%), Postives = 379/379 (100.00%), Query Frame = 0
BLAST of CSPI02G18950 vs. ExPASy TrEMBL
Match: A0A1S3BA80 (transcription factor SPATULA-like OS=Cucumis melo OX=3656 GN=LOC103487874 PE=4 SV=1) HSP 1 Score: 722.2 bits (1863), Expect = 1.1e-204 Identity = 367/379 (96.83%), Postives = 374/379 (98.68%), Query Frame = 0
BLAST of CSPI02G18950 vs. ExPASy TrEMBL
Match: A0A5A7V331 (Transcription factor SPATULA-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G00490 PE=4 SV=1) HSP 1 Score: 720.7 bits (1859), Expect = 3.2e-204 Identity = 366/379 (96.57%), Postives = 373/379 (98.42%), Query Frame = 0
BLAST of CSPI02G18950 vs. ExPASy TrEMBL
Match: E5GB79 (Serine/threonine-protein kinase OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1) HSP 1 Score: 690.3 bits (1780), Expect = 4.6e-195 Identity = 350/358 (97.77%), Postives = 356/358 (99.44%), Query Frame = 0
BLAST of CSPI02G18950 vs. ExPASy TrEMBL
Match: A0A6J1HCX3 (transcription factor PIF3-like OS=Cucurbita moschata OX=3662 GN=LOC111462930 PE=4 SV=1) HSP 1 Score: 628.6 bits (1620), Expect = 1.7e-176 Identity = 326/376 (86.70%), Postives = 343/376 (91.22%), Query Frame = 0
BLAST of CSPI02G18950 vs. NCBI nr
Match: XP_011649579.1 (transcription factor SPATULA [Cucumis sativus] >KGN62490.1 hypothetical protein Csa_018607 [Cucumis sativus]) HSP 1 Score: 744.6 bits (1921), Expect = 4.3e-211 Identity = 379/379 (100.00%), Postives = 379/379 (100.00%), Query Frame = 0
BLAST of CSPI02G18950 vs. NCBI nr
Match: XP_008444604.1 (PREDICTED: transcription factor SPATULA-like [Cucumis melo]) HSP 1 Score: 722.2 bits (1863), Expect = 2.3e-204 Identity = 367/379 (96.83%), Postives = 374/379 (98.68%), Query Frame = 0
BLAST of CSPI02G18950 vs. NCBI nr
Match: KAA0060916.1 (transcription factor SPATULA-like [Cucumis melo var. makuwa]) HSP 1 Score: 720.7 bits (1859), Expect = 6.6e-204 Identity = 366/379 (96.57%), Postives = 373/379 (98.42%), Query Frame = 0
BLAST of CSPI02G18950 vs. NCBI nr
Match: XP_038884958.1 (transcription factor SPATULA-like [Benincasa hispida]) HSP 1 Score: 694.9 bits (1792), Expect = 3.9e-196 Identity = 350/379 (92.35%), Postives = 367/379 (96.83%), Query Frame = 0
BLAST of CSPI02G18950 vs. NCBI nr
Match: ADN33721.1 (serine/threonine-protein kinase [Cucumis melo subsp. melo]) HSP 1 Score: 690.3 bits (1780), Expect = 9.6e-195 Identity = 350/358 (97.77%), Postives = 356/358 (99.44%), Query Frame = 0
BLAST of CSPI02G18950 vs. TAIR 10
Match: AT4G36930.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein ) HSP 1 Score: 142.5 bits (358), Expect = 6.9e-34 Identity = 127/338 (37.57%), Postives = 171/338 (50.59%), Query Frame = 0
BLAST of CSPI02G18950 vs. TAIR 10
Match: AT5G67110.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein ) HSP 1 Score: 108.6 bits (270), Expect = 1.1e-23 Identity = 61/83 (73.49%), Postives = 69/83 (83.13%), Query Frame = 0
BLAST of CSPI02G18950 vs. TAIR 10
Match: AT1G09530.1 (phytochrome interacting factor 3 ) HSP 1 Score: 106.7 bits (265), Expect = 4.2e-23 Identity = 98/277 (35.38%), Postives = 141/277 (50.90%), Query Frame = 0
BLAST of CSPI02G18950 vs. TAIR 10
Match: AT1G09530.2 (phytochrome interacting factor 3 ) HSP 1 Score: 106.7 bits (265), Expect = 4.2e-23 Identity = 98/277 (35.38%), Postives = 141/277 (50.90%), Query Frame = 0
BLAST of CSPI02G18950 vs. TAIR 10
Match: AT2G20180.2 (phytochrome interacting factor 3-like 5 ) HSP 1 Score: 99.0 bits (245), Expect = 8.8e-21 Identity = 71/164 (43.29%), Postives = 94/164 (57.32%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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