CSPI02G18480 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI02G18480
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	GATA type zinc finger transcription factor family protein
Location	Chr2: 17109890 .. 17111453 (-)
RNA-Seq Expression	CSPI02G18480
Synteny	CSPI02G18480

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCTCTTTAATTAATTTTTTTAGTGATTTGATTTCAAGACAGCTACGGGTTGAGACATTTTATCAAAGAAACAAGTTGTTGAGTCTGCTCCCAAGATCCAACGAAATCATTGCTTGCTTCCCCACTGACATTCATCATCTATATATCCTCTGCTTCATCTCTCCATTCTTCTAAATTAAAGCTCACTTCTTCCACAGGCAAGAATAGATCTTCGTTCTTGTAGTGAACAACACTCCAAAGCCATGGCTTTTGCAGGCACAACCCAGAAATGTATGGCTTGTGAAAAAACCGTGTATCTCGTCGACAAGCTGACTGCTGATAACCGCATCTACCACAAAGCCTGTTTCAGATGCCACCATTGCAAAGGCACTCTGAAGGTGAAACCAATGGTTCCACCCCCACTATTTTTTTGTTTGTGATTGATGAGGGAAATGGAACTTTGAAACTGATGTTGTTGATCTGTTTTCAGCTCAGCAACTACAATTCCTTTGAGGGAGTGCTTTACTGTAGGCCACACTTTGATCAGATTTTTAAGAGGACTGGCAGTCTTGATAAAAGCTTTGAAGGTACAAATCATAAGTTCTGTTGGATGGATGGATCTGATTTCTCAGATTTTTCATTTTCATTCTGTTGATAACTGATCCATTTTGGTTTCTTTTTCTTGATTTCTTTTTTGTGTGTTTTTAGGAACGCCGAAGATCGTAAAACCAGAGAAACCAATTGATAGCGAGGTAATTCCCTGTTTGCTTATACTTGAGCTTGTTACAGCCGATGTAATTCTTCTATTTCTACCATTGATCTTGAAAATACATCAACAGAGACCGACAGCGAACAAGGTTGCTAGCAAGTTTGGAGGAACCAGAGATAAATGTCTTGGTTGTGACAACACTGTTTATCCTACAGAAAAGGTAACAACAGTATACAAAAGTTTTCTTTTCTTCTTCCTGGATTTCATTTATTAACTGAACGAGCAAATCCAAACTCTGTAAATGGTCTTCGTTTCAAGGTTACTGTGAATGGAACTCCATACCATAAAAGTTGTTTCAAATGCTGCCATGGAGGATGCACGATCAGCCCTTCAAACTATATCGCTCATGAGGGGCGACTTTACTGCAAGCACCACCATATCCAACTGATCAAGGAGAAAGGAAACTTGAGTCAGCTTGAGGGAGACCATGAAAAGATAACAGCAAAGGAGAAAATCAATGGCGGAGAGGTGGTGGCTTCAGAAGCCTGATTTTGCAGAATCAACCTTTATGGGAATCTGTTTTTCCTTTCAGGCAAAATATCTTAGTTTCCTCCTTTCCAACCCTTGTCCTTTTAAGGCTGTACACTAAAAGAAGTACTGGCATCCATTGCGTTTCGTGTTAAAAGTGTGTTTTTGGCCTGTCTGTTTCTCAAATATTCAAATAACATGCTCTAACAGATGCCAAGATCTGTTTGATTTTCACCATCTTTCGTCTCAAAGAAGTGTGGCATGTTTGTAGATTTGAATCAAATTCCTATCAATTCCAATGGATGCTTATTATTATAAGTACTTTTGTCATTTCTATAATCAGTATAC

mRNA sequence

TTCTCTTTAATTAATTTTTTTAGTGATTTGATTTCAAGACAGCTACGGGTTGAGACATTTTATCAAAGAAACAAGTTGTTGAGTCTGCTCCCAAGATCCAACGAAATCATTGCTTGCTTCCCCACTGACATTCATCATCTATATATCCTCTGCTTCATCTCTCCATTCTTCTAAATTAAAGCTCACTTCTTCCACAGGCAAGAATAGATCTTCGTTCTTGTAGTGAACAACACTCCAAAGCCATGGCTTTTGCAGGCACAACCCAGAAATGTATGGCTTGTGAAAAAACCGTGTATCTCGTCGACAAGCTGACTGCTGATAACCGCATCTACCACAAAGCCTGTTTCAGATGCCACCATTGCAAAGGCACTCTGAAGCTCAGCAACTACAATTCCTTTGAGGGAGTGCTTTACTGTAGGCCACACTTTGATCAGATTTTTAAGAGGACTGGCAGTCTTGATAAAAGCTTTGAAGGAACGCCGAAGATCGTAAAACCAGAGAAACCAATTGATAGCGAGAGACCGACAGCGAACAAGGTTGCTAGCAAGTTTGGAGGAACCAGAGATAAATGTCTTGGTTGTGACAACACTGTTTATCCTACAGAAAAGGTTACTGTGAATGGAACTCCATACCATAAAAGTTGTTTCAAATGCTGCCATGGAGGATGCACGATCAGCCCTTCAAACTATATCGCTCATGAGGGGCGACTTTACTGCAAGCACCACCATATCCAACTGATCAAGGAGAAAGGAAACTTGAGTCAGCTTGAGGGAGACCATGAAAAGATAACAGCAAAGGAGAAAATCAATGGCGGAGAGGTGGTGGCTTCAGAAGCCTGATTTTGCAGAATCAACCTTTATGGGAATCTGTTTTTCCTTTCAGGCAAAATATCTTAGTTTCCTCCTTTCCAACCCTTGTCCTTTTAAGGCTGTACACTAAAAGAAGTACTGGCATCCATTGCGTTTCGTGTTAAAAGTGTGTTTTTGGCCTGTCTGTTTCTCAAATATTCAAATAACATGCTCTAACAGATGCCAAGATCTGTTTGATTTTCACCATCTTTCGTCTCAAAGAAGTGTGGCATGTTTGTAGATTTGAATCAAATTCCTATCAATTCCAATGGATGCTTATTATTATAAGTACTTTTGTCATTTCTATAATCAGTATAC

Coding sequence (CDS)

ATGGCTTTTGCAGGCACAACCCAGAAATGTATGGCTTGTGAAAAAACCGTGTATCTCGTCGACAAGCTGACTGCTGATAACCGCATCTACCACAAAGCCTGTTTCAGATGCCACCATTGCAAAGGCACTCTGAAGCTCAGCAACTACAATTCCTTTGAGGGAGTGCTTTACTGTAGGCCACACTTTGATCAGATTTTTAAGAGGACTGGCAGTCTTGATAAAAGCTTTGAAGGAACGCCGAAGATCGTAAAACCAGAGAAACCAATTGATAGCGAGAGACCGACAGCGAACAAGGTTGCTAGCAAGTTTGGAGGAACCAGAGATAAATGTCTTGGTTGTGACAACACTGTTTATCCTACAGAAAAGGTTACTGTGAATGGAACTCCATACCATAAAAGTTGTTTCAAATGCTGCCATGGAGGATGCACGATCAGCCCTTCAAACTATATCGCTCATGAGGGGCGACTTTACTGCAAGCACCACCATATCCAACTGATCAAGGAGAAAGGAAACTTGAGTCAGCTTGAGGGAGACCATGAAAAGATAACAGCAAAGGAGAAAATCAATGGCGGAGAGGTGGTGGCTTCAGAAGCCTGA

Protein sequence

MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRPHFDQIFKRTGSLDKSFEGTPKIVKPEKPIDSERPTANKVASKFGGTRDKCLGCDNTVYPTEKVTVNGTPYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQLEGDHEKITAKEKINGGEVVASEA*

Homology

[Close]

BLAST of CSPI02G18480 vs. ExPASy Swiss-Prot
Match: Q94JX5 (LIM domain-containing protein WLIM1 OS=Arabidopsis thaliana OX=3702 GN=WLIM1 PE=1 SV=1)

HSP 1 Score: 348.2 bits (892), Expect = 6.1e-95
Identity = 157/188 (83.51%), Postives = 172/188 (91.49%), Query Frame = 0


Query: 1   MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60
           MAFAGTTQKCMAC+KTVYLVDKLTADNR+YHKACFRCHHCKGTLKLSNYNSFEGVLYCRP
Sbjct: 1   MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60

Query: 61  HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDSERPTANKVASKFGGTRDKCLGCDNTVYPT 120
           HFDQ FKRTGSL+KSFEGTPKI KP++P++ ERP   KV++ FGGTR+KC+GCD TVYP 
Sbjct: 61  HFDQNFKRTGSLEKSFEGTPKIGKPDRPLEGERPAGTKVSNMFGGTREKCVGCDKTVYPI 120

Query: 121 EKVTVNGTPYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQLEGDHE 180
           EKV+VNGT YHKSCFKC HGGCTISPSNYIAHEG+LYCKHHHIQLIKEKGNLSQLEG  E
Sbjct: 121 EKVSVNGTLYHKSCFKCTHGGCTISPSNYIAHEGKLYCKHHHIQLIKEKGNLSQLEGGGE 180

Query: 181 KITAKEKI 189
              AK+K+
Sbjct: 181 N-AAKDKV 187

[Close]

BLAST of CSPI02G18480 vs. ExPASy Swiss-Prot
Match: P29675 (Pollen-specific protein SF3 OS=Helianthus annuus OX=4232 GN=SF3 PE=2 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 1.2e-77
Identity = 128/175 (73.14%), Postives = 147/175 (84.00%), Query Frame = 0


Query: 2   AFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRPH 61
           +F GTTQKC  CEKTVYLVDKL A+ R+YHKACFRCHHC  TLKLSN+NSF+GV+YCR H
Sbjct: 3   SFTGTTQKCTVCEKTVYLVDKLVANQRVYHKACFRCHHCNSTLKLSNFNSFDGVVYCRHH 62

Query: 62  FDQIFKRTGSLDKSFEGTPKIVKPEKPIDSERPTANKVASKFGGTRDKCLGCDNTVYPTE 121
           FDQ+FKRTGSL+KSF+GTPK  KPE+    E  +AN+++S F GTRDKC  C   VYP E
Sbjct: 63  FDQLFKRTGSLEKSFDGTPKF-KPERTFSQETQSANRLSSFFEGTRDKCNACAKIVYPIE 122

Query: 122 KVTVNGTPYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQLE 177
           +V V+GT YH++CFKCCHGGCTISPSNYIAHEGRLYCKHHHIQL K+KGN SQLE
Sbjct: 123 RVKVDGTAYHRACFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLFKKKGNYSQLE 176

[Close]

BLAST of CSPI02G18480 vs. ExPASy Swiss-Prot
Match: O04193 (LIM domain-containing protein WLIM2a OS=Arabidopsis thaliana OX=3702 GN=WLIN2A PE=1 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 3.2e-59
Identity = 105/175 (60.00%), Postives = 125/175 (71.43%), Query Frame = 0


Query: 1   MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60
           M+F GT QKC ACEKTVY V+ L+AD   YHKACF+C HCK  L+LSNY+S EGV+YCRP
Sbjct: 1   MSFTGTQQKCRACEKTVYPVELLSADGISYHKACFKCSHCKSRLQLSNYSSMEGVVYCRP 60

Query: 61  HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDSERPTANKVASKFGGTRDKCLGCDNTVYPT 120
           HF+Q+FK +GS  K+F+   K +  +KP      T +++A  F GT+DKC  C  TVYP 
Sbjct: 61  HFEQLFKESGSFSKNFQSPAKPL-TDKPTPELNRTPSRLAGMFSGTQDKCATCTKTVYPI 120

Query: 121 EKVTVNGTPYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQL 176
           EKVTV    YHKSCFKC HGGC ISPSNY A EG LYCKHH  QL KEKG+ + L
Sbjct: 121 EKVTVESQCYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHL 174

[Close]

BLAST of CSPI02G18480 vs. ExPASy Swiss-Prot
Match: Q9M047 (LIM domain-containing protein WLIM2b OS=Arabidopsis thaliana OX=3702 GN=WLIM2B PE=1 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 4.6e-58
Identity = 104/179 (58.10%), Postives = 126/179 (70.39%), Query Frame = 0


Query: 1   MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60
           M+F GT QKC ACEKTVY V+ L+AD   YHK+CF+C HCK  L+LS+Y+S EGVLYC+P
Sbjct: 1   MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 60

Query: 61  HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDSERP----TANKVASKFGGTRDKCLGCDNT 120
           HF+Q+FK +GS +K+F+       P K  D   P    T ++VA +F GT++KC  C  T
Sbjct: 61  HFEQLFKESGSFNKNFQ------SPAKSADKSTPELTRTPSRVAGRFSGTQEKCATCSKT 120

Query: 121 VYPTEKVTVNGTPYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQL 176
           VYP EKVTV    YHKSCFKC HGGC ISPSNY A EG LYCKHH  QL KEKG+ + L
Sbjct: 121 VYPIEKVTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHL 173

[Close]

BLAST of CSPI02G18480 vs. ExPASy Swiss-Prot
Match: O80839 (LIM domain-containing protein PLIM2a OS=Arabidopsis thaliana OX=3702 GN=PLIM2A PE=1 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 9.9e-53
Identity = 92/175 (52.57%), Postives = 122/175 (69.71%), Query Frame = 0


Query: 1   MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60
           M+F GT  KC AC+KTVY++D LT +   YHK+CFRC HCKGTL +SNY+S +GVLYC+P
Sbjct: 1   MSFTGTLDKCKACDKTVYVMDLLTLEGNTYHKSCFRCTHCKGTLVISNYSSMDGVLYCKP 60

Query: 61  HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDSERPTANKVASKFGGTRDKCLGCDNTVYPT 120
           HF+Q+FK +G+  K+F+      K EKP D    T +K++S F GT+DKC  C  TVYP 
Sbjct: 61  HFEQLFKESGNYSKNFQAG----KTEKPNDHLTRTPSKLSSFFSGTQDKCATCKKTVYPL 120

Query: 121 EKVTVNGTPYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQL 176
           EKVT+ G  YHK+CF+C H GC ++ S+Y +  G LYCK H  QL  EKG+ + +
Sbjct: 121 EKVTMEGESYHKTCFRCTHSGCPLTHSSYASLNGVLYCKVHFNQLFLEKGSYNHV 171

[Close]

BLAST of CSPI02G18480 vs. ExPASy TrEMBL
Match: A0A0A0LNS7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G354680 PE=4 SV=1)

HSP 1 Score: 427.6 bits (1098), Expect = 2.9e-116
Identity = 198/198 (100.00%), Postives = 198/198 (100.00%), Query Frame = 0


Query: 1   MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60
           MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP
Sbjct: 1   MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60

Query: 61  HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDSERPTANKVASKFGGTRDKCLGCDNTVYPT 120
           HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDSERPTANKVASKFGGTRDKCLGCDNTVYPT
Sbjct: 61  HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDSERPTANKVASKFGGTRDKCLGCDNTVYPT 120

Query: 121 EKVTVNGTPYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQLEGDHE 180
           EKVTVNGTPYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQLEGDHE
Sbjct: 121 EKVTVNGTPYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQLEGDHE 180

Query: 181 KITAKEKINGGEVVASEA 199
           KITAKEKINGGEVVASEA
Sbjct: 181 KITAKEKINGGEVVASEA 198

[Close]

BLAST of CSPI02G18480 vs. ExPASy TrEMBL
Match: A0A1S3BBD7 (LIM domain-containing protein WLIM1 OS=Cucumis melo OX=3656 GN=LOC103487830 PE=4 SV=1)

HSP 1 Score: 421.8 bits (1083), Expect = 1.6e-114
Identity = 195/198 (98.48%), Postives = 196/198 (98.99%), Query Frame = 0


Query: 1   MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60
           MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP
Sbjct: 1   MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60

Query: 61  HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDSERPTANKVASKFGGTRDKCLGCDNTVYPT 120
           HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDSE+PTANKVAS FGGTRDKCLGCDNTVYPT
Sbjct: 61  HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDSEKPTANKVASMFGGTRDKCLGCDNTVYPT 120

Query: 121 EKVTVNGTPYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQLEGDHE 180
           EKVTVNG PYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQLEGDHE
Sbjct: 121 EKVTVNGIPYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQLEGDHE 180

Query: 181 KITAKEKINGGEVVASEA 199
           KITAKEKINGGEVVASEA
Sbjct: 181 KITAKEKINGGEVVASEA 198

[Close]

BLAST of CSPI02G18480 vs. ExPASy TrEMBL
Match: A0A6J1BT53 (LIM domain-containing protein WLIM1-like OS=Momordica charantia OX=3673 GN=LOC111004606 PE=4 SV=1)

HSP 1 Score: 412.1 bits (1058), Expect = 1.3e-111
Identity = 191/198 (96.46%), Postives = 195/198 (98.48%), Query Frame = 0


Query: 1   MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60
           MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP
Sbjct: 1   MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60

Query: 61  HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDSERPTANKVASKFGGTRDKCLGCDNTVYPT 120
           HFDQ+FKRTGSLDKSFEGTPKIVKPEKPID E+PTANKVAS FGGTRDKCLGC+NTVYPT
Sbjct: 61  HFDQLFKRTGSLDKSFEGTPKIVKPEKPIDGEKPTANKVASMFGGTRDKCLGCNNTVYPT 120

Query: 121 EKVTVNGTPYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQLEGDHE 180
           EKVTVNGTPYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQLEGDHE
Sbjct: 121 EKVTVNGTPYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQLEGDHE 180

Query: 181 KITAKEKINGGEVVASEA 199
           KITA+EKINGGE VASEA
Sbjct: 181 KITAREKINGGE-VASEA 197

[Close]

BLAST of CSPI02G18480 vs. ExPASy TrEMBL
Match: A0A6J1K7W9 (LIM domain-containing protein WLIM1-like OS=Cucurbita maxima OX=3661 GN=LOC111492481 PE=4 SV=1)

HSP 1 Score: 406.8 bits (1044), Expect = 5.4e-110
Identity = 188/198 (94.95%), Postives = 193/198 (97.47%), Query Frame = 0


Query: 1   MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60
           MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP
Sbjct: 1   MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60

Query: 61  HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDSERPTANKVASKFGGTRDKCLGCDNTVYPT 120
           HFDQ+FKRTGSLDKSFEGTPKIVKPEKP+DSE+PTA KVAS FGGTRDKCLGC+NTVYPT
Sbjct: 61  HFDQLFKRTGSLDKSFEGTPKIVKPEKPVDSEKPTAKKVASMFGGTRDKCLGCNNTVYPT 120

Query: 121 EKVTVNGTPYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQLEGDHE 180
           EKVTVNGTPYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQLEGDHE
Sbjct: 121 EKVTVNGTPYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQLEGDHE 180

Query: 181 KITAKEKINGGEVVASEA 199
           KI +KEKIN GE VASEA
Sbjct: 181 KIPSKEKIN-GEAVASEA 197

[Close]

BLAST of CSPI02G18480 vs. ExPASy TrEMBL
Match: A0A6J1HHA7 (LIM domain-containing protein WLIM1-like OS=Cucurbita moschata OX=3662 GN=LOC111462919 PE=4 SV=1)

HSP 1 Score: 406.8 bits (1044), Expect = 5.4e-110
Identity = 188/198 (94.95%), Postives = 193/198 (97.47%), Query Frame = 0


Query: 1   MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60
           MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP
Sbjct: 1   MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60

Query: 61  HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDSERPTANKVASKFGGTRDKCLGCDNTVYPT 120
           HFDQ+FKRTGSLDKSFEGTPKIVKPEKP+DSE+PTA KVAS FGGTRDKCLGC+NTVYPT
Sbjct: 61  HFDQLFKRTGSLDKSFEGTPKIVKPEKPVDSEKPTAKKVASMFGGTRDKCLGCNNTVYPT 120

Query: 121 EKVTVNGTPYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQLEGDHE 180
           EKVTVNGTPYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQLEGDHE
Sbjct: 121 EKVTVNGTPYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQLEGDHE 180

Query: 181 KITAKEKINGGEVVASEA 199
           KI +KEKIN GE VASEA
Sbjct: 181 KIPSKEKIN-GEAVASEA 197

[Close]

BLAST of CSPI02G18480 vs. NCBI nr
Match: XP_004142897.1 (LIM domain-containing protein WLIM1 [Cucumis sativus] >XP_031737336.1 LIM domain-containing protein WLIM1 [Cucumis sativus])

HSP 1 Score: 427.6 bits (1098), Expect = 6.1e-116
Identity = 198/198 (100.00%), Postives = 198/198 (100.00%), Query Frame = 0


Query: 1   MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60
           MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP
Sbjct: 1   MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60

Query: 61  HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDSERPTANKVASKFGGTRDKCLGCDNTVYPT 120
           HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDSERPTANKVASKFGGTRDKCLGCDNTVYPT
Sbjct: 61  HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDSERPTANKVASKFGGTRDKCLGCDNTVYPT 120

Query: 121 EKVTVNGTPYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQLEGDHE 180
           EKVTVNGTPYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQLEGDHE
Sbjct: 121 EKVTVNGTPYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQLEGDHE 180

Query: 181 KITAKEKINGGEVVASEA 199
           KITAKEKINGGEVVASEA
Sbjct: 181 KITAKEKINGGEVVASEA 198

[Close]

BLAST of CSPI02G18480 vs. NCBI nr
Match: XP_008444540.1 (PREDICTED: LIM domain-containing protein WLIM1 [Cucumis melo])

HSP 1 Score: 421.8 bits (1083), Expect = 3.3e-114
Identity = 195/198 (98.48%), Postives = 196/198 (98.99%), Query Frame = 0


Query: 1   MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60
           MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP
Sbjct: 1   MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60

Query: 61  HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDSERPTANKVASKFGGTRDKCLGCDNTVYPT 120
           HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDSE+PTANKVAS FGGTRDKCLGCDNTVYPT
Sbjct: 61  HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDSEKPTANKVASMFGGTRDKCLGCDNTVYPT 120

Query: 121 EKVTVNGTPYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQLEGDHE 180
           EKVTVNG PYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQLEGDHE
Sbjct: 121 EKVTVNGIPYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQLEGDHE 180

Query: 181 KITAKEKINGGEVVASEA 199
           KITAKEKINGGEVVASEA
Sbjct: 181 KITAKEKINGGEVVASEA 198

[Close]

BLAST of CSPI02G18480 vs. NCBI nr
Match: XP_038886389.1 (LIM domain-containing protein WLIM1-like [Benincasa hispida])

HSP 1 Score: 421.0 bits (1081), Expect = 5.7e-114
Identity = 193/198 (97.47%), Postives = 197/198 (99.49%), Query Frame = 0


Query: 1   MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60
           MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP
Sbjct: 1   MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60

Query: 61  HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDSERPTANKVASKFGGTRDKCLGCDNTVYPT 120
           HFDQ+FKRTGSLDKSFEGTPKIVKPEKPID E+PTANKVASKFGGTRDKCLGC+NTVYPT
Sbjct: 61  HFDQLFKRTGSLDKSFEGTPKIVKPEKPIDGEKPTANKVASKFGGTRDKCLGCNNTVYPT 120

Query: 121 EKVTVNGTPYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQLEGDHE 180
           EKVTVNGTPYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQLEGDHE
Sbjct: 121 EKVTVNGTPYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQLEGDHE 180

Query: 181 KITAKEKINGGEVVASEA 199
           KITAKEKINGGE+VASEA
Sbjct: 181 KITAKEKINGGEMVASEA 198

[Close]

BLAST of CSPI02G18480 vs. NCBI nr
Match: XP_022131363.1 (LIM domain-containing protein WLIM1-like [Momordica charantia])

HSP 1 Score: 412.1 bits (1058), Expect = 2.6e-111
Identity = 191/198 (96.46%), Postives = 195/198 (98.48%), Query Frame = 0


Query: 1   MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60
           MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP
Sbjct: 1   MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60

Query: 61  HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDSERPTANKVASKFGGTRDKCLGCDNTVYPT 120
           HFDQ+FKRTGSLDKSFEGTPKIVKPEKPID E+PTANKVAS FGGTRDKCLGC+NTVYPT
Sbjct: 61  HFDQLFKRTGSLDKSFEGTPKIVKPEKPIDGEKPTANKVASMFGGTRDKCLGCNNTVYPT 120

Query: 121 EKVTVNGTPYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQLEGDHE 180
           EKVTVNGTPYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQLEGDHE
Sbjct: 121 EKVTVNGTPYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQLEGDHE 180

Query: 181 KITAKEKINGGEVVASEA 199
           KITA+EKINGGE VASEA
Sbjct: 181 KITAREKINGGE-VASEA 197

[Close]

BLAST of CSPI02G18480 vs. NCBI nr
Match: KAE8652064.1 (hypothetical protein Csa_018727 [Cucumis sativus])

HSP 1 Score: 412.1 bits (1058), Expect = 2.6e-111
Identity = 198/227 (87.22%), Postives = 198/227 (87.22%), Query Frame = 0


Query: 1   MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60
           MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP
Sbjct: 1   MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60

Query: 61  HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDSE---------------------------- 120
           HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDSE                            
Sbjct: 61  HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDSEVIPCLLILELVTADVILLFLPLILKIHQ 120

Query: 121 -RPTANKVASKFGGTRDKCLGCDNTVYPTEKVTVNGTPYHKSCFKCCHGGCTISPSNYIA 180
            RPTANKVASKFGGTRDKCLGCDNTVYPTEKVTVNGTPYHKSCFKCCHGGCTISPSNYIA
Sbjct: 121 QRPTANKVASKFGGTRDKCLGCDNTVYPTEKVTVNGTPYHKSCFKCCHGGCTISPSNYIA 180

Query: 181 HEGRLYCKHHHIQLIKEKGNLSQLEGDHEKITAKEKINGGEVVASEA 199
           HEGRLYCKHHHIQLIKEKGNLSQLEGDHEKITAKEKINGGEVVASEA
Sbjct: 181 HEGRLYCKHHHIQLIKEKGNLSQLEGDHEKITAKEKINGGEVVASEA 227

[Close]

BLAST of CSPI02G18480 vs. TAIR 10
Match: AT1G10200.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 348.2 bits (892), Expect = 4.4e-96
Identity = 157/188 (83.51%), Postives = 172/188 (91.49%), Query Frame = 0


Query: 1   MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60
           MAFAGTTQKCMAC+KTVYLVDKLTADNR+YHKACFRCHHCKGTLKLSNYNSFEGVLYCRP
Sbjct: 1   MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60

Query: 61  HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDSERPTANKVASKFGGTRDKCLGCDNTVYPT 120
           HFDQ FKRTGSL+KSFEGTPKI KP++P++ ERP   KV++ FGGTR+KC+GCD TVYP 
Sbjct: 61  HFDQNFKRTGSLEKSFEGTPKIGKPDRPLEGERPAGTKVSNMFGGTREKCVGCDKTVYPI 120

Query: 121 EKVTVNGTPYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQLEGDHE 180
           EKV+VNGT YHKSCFKC HGGCTISPSNYIAHEG+LYCKHHHIQLIKEKGNLSQLEG  E
Sbjct: 121 EKVSVNGTLYHKSCFKCTHGGCTISPSNYIAHEGKLYCKHHHIQLIKEKGNLSQLEGGGE 180

Query: 181 KITAKEKI 189
              AK+K+
Sbjct: 181 N-AAKDKV 187

[Close]

BLAST of CSPI02G18480 vs. TAIR 10
Match: AT2G39900.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 229.6 bits (584), Expect = 2.3e-60
Identity = 105/175 (60.00%), Postives = 125/175 (71.43%), Query Frame = 0


Query: 1   MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60
           M+F GT QKC ACEKTVY V+ L+AD   YHKACF+C HCK  L+LSNY+S EGV+YCRP
Sbjct: 1   MSFTGTQQKCRACEKTVYPVELLSADGISYHKACFKCSHCKSRLQLSNYSSMEGVVYCRP 60

Query: 61  HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDSERPTANKVASKFGGTRDKCLGCDNTVYPT 120
           HF+Q+FK +GS  K+F+   K +  +KP      T +++A  F GT+DKC  C  TVYP 
Sbjct: 61  HFEQLFKESGSFSKNFQSPAKPL-TDKPTPELNRTPSRLAGMFSGTQDKCATCTKTVYPI 120

Query: 121 EKVTVNGTPYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQL 176
           EKVTV    YHKSCFKC HGGC ISPSNY A EG LYCKHH  QL KEKG+ + L
Sbjct: 121 EKVTVESQCYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHL 174

[Close]

BLAST of CSPI02G18480 vs. TAIR 10
Match: AT3G55770.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 225.7 bits (574), Expect = 3.3e-59
Identity = 104/179 (58.10%), Postives = 126/179 (70.39%), Query Frame = 0


Query: 1   MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60
           M+F GT QKC ACEKTVY V+ L+AD   YHK+CF+C HCK  L+LS+Y+S EGVLYC+P
Sbjct: 1   MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 60

Query: 61  HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDSERP----TANKVASKFGGTRDKCLGCDNT 120
           HF+Q+FK +GS +K+F+       P K  D   P    T ++VA +F GT++KC  C  T
Sbjct: 61  HFEQLFKESGSFNKNFQ------SPAKSADKSTPELTRTPSRVAGRFSGTQEKCATCSKT 120

Query: 121 VYPTEKVTVNGTPYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQL 176
           VYP EKVTV    YHKSCFKC HGGC ISPSNY A EG LYCKHH  QL KEKG+ + L
Sbjct: 121 VYPIEKVTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHL 173

[Close]

BLAST of CSPI02G18480 vs. TAIR 10
Match: AT3G55770.2 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 225.7 bits (574), Expect = 3.3e-59
Identity = 104/179 (58.10%), Postives = 126/179 (70.39%), Query Frame = 0


Query: 1   MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60
           M+F GT QKC ACEKTVY V+ L+AD   YHK+CF+C HCK  L+LS+Y+S EGVLYC+P
Sbjct: 1   MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 60

Query: 61  HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDSERP----TANKVASKFGGTRDKCLGCDNT 120
           HF+Q+FK +GS +K+F+       P K  D   P    T ++VA +F GT++KC  C  T
Sbjct: 61  HFEQLFKESGSFNKNFQ------SPAKSADKSTPELTRTPSRVAGRFSGTQEKCATCSKT 120

Query: 121 VYPTEKVTVNGTPYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQL 176
           VYP EKVTV    YHKSCFKC HGGC ISPSNY A EG LYCKHH  QL KEKG+ + L
Sbjct: 121 VYPIEKVTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHL 173

[Close]

BLAST of CSPI02G18480 vs. TAIR 10
Match: AT3G55770.3 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 225.7 bits (574), Expect = 3.3e-59
Identity = 104/179 (58.10%), Postives = 126/179 (70.39%), Query Frame = 0


Query: 1   MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60
           M+F GT QKC ACEKTVY V+ L+AD   YHK+CF+C HCK  L+LS+Y+S EGVLYC+P
Sbjct: 1   MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 60

Query: 61  HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDSERP----TANKVASKFGGTRDKCLGCDNT 120
           HF+Q+FK +GS +K+F+       P K  D   P    T ++VA +F GT++KC  C  T
Sbjct: 61  HFEQLFKESGSFNKNFQ------SPAKSADKSTPELTRTPSRVAGRFSGTQEKCATCSKT 120

Query: 121 VYPTEKVTVNGTPYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQL 176
           VYP EKVTV    YHKSCFKC HGGC ISPSNY A EG LYCKHH  QL KEKG+ + L
Sbjct: 121 VYPIEKVTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHL 173

The following BLAST results are available for this feature:

BLAST of CSPI02G18480 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94JX5	6.1e-95	83.51	LIM domain-containing protein WLIM1 OS=Arabidopsis thaliana OX=3702 GN=WLIM1 PE=...	[more]
P29675	1.2e-77	73.14	Pollen-specific protein SF3 OS=Helianthus annuus OX=4232 GN=SF3 PE=2 SV=1	[more]
O04193	3.2e-59	60.00	LIM domain-containing protein WLIM2a OS=Arabidopsis thaliana OX=3702 GN=WLIN2A P...	[more]
Q9M047	4.6e-58	58.10	LIM domain-containing protein WLIM2b OS=Arabidopsis thaliana OX=3702 GN=WLIM2B P...	[more]
O80839	9.9e-53	52.57	LIM domain-containing protein PLIM2a OS=Arabidopsis thaliana OX=3702 GN=PLIM2A P...	[more]

BLAST of CSPI02G18480 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LNS7	2.9e-116	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G354680 PE=4 SV=1	[more]
A0A1S3BBD7	1.6e-114	98.48	LIM domain-containing protein WLIM1 OS=Cucumis melo OX=3656 GN=LOC103487830 PE=4...	[more]
A0A6J1BT53	1.3e-111	96.46	LIM domain-containing protein WLIM1-like OS=Momordica charantia OX=3673 GN=LOC11...	[more]
A0A6J1K7W9	5.4e-110	94.95	LIM domain-containing protein WLIM1-like OS=Cucurbita maxima OX=3661 GN=LOC11149...	[more]
A0A6J1HHA7	5.4e-110	94.95	LIM domain-containing protein WLIM1-like OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]

BLAST of CSPI02G18480 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004142897.1	6.1e-116	100.00	LIM domain-containing protein WLIM1 [Cucumis sativus] >XP_031737336.1 LIM domain...	[more]
XP_008444540.1	3.3e-114	98.48	PREDICTED: LIM domain-containing protein WLIM1 [Cucumis melo]	[more]
XP_038886389.1	5.7e-114	97.47	LIM domain-containing protein WLIM1-like [Benincasa hispida]	[more]
XP_022131363.1	2.6e-111	96.46	LIM domain-containing protein WLIM1-like [Momordica charantia]	[more]
KAE8652064.1	2.6e-111	87.22	hypothetical protein Csa_018727 [Cucumis sativus]	[more]

BLAST of CSPI02G18480 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G10200.1	4.4e-96	83.51	GATA type zinc finger transcription factor family protein	[more]
AT2G39900.1	2.3e-60	60.00	GATA type zinc finger transcription factor family protein	[more]
AT3G55770.1	3.3e-59	58.10	GATA type zinc finger transcription factor family protein	[more]
AT3G55770.2	3.3e-59	58.10	GATA type zinc finger transcription factor family protein	[more]
AT3G55770.3	3.3e-59	58.10	GATA type zinc finger transcription factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001781	Zinc finger, LIM-type	SMART	SM00132	lim_4	coord: 9..61 e-value: 5.2E-10 score: 49.3 coord: 109..161 e-value: 5.2E-12 score: 55.9
IPR001781	Zinc finger, LIM-type	PFAM	PF00412	LIM	coord: 110..164 e-value: 1.3E-11 score: 44.6 coord: 10..63 e-value: 1.3E-9 score: 38.1
IPR001781	Zinc finger, LIM-type	PROSITE	PS00478	LIM_DOMAIN_1	coord: 10..44
IPR001781	Zinc finger, LIM-type	PROSITE	PS50023	LIM_DOMAIN_2	coord: 108..168 score: 12.295899
IPR001781	Zinc finger, LIM-type	PROSITE	PS50023	LIM_DOMAIN_2	coord: 8..68 score: 13.0285
None	No IPR available	GENE3D	2.10.110.10	Cysteine Rich Protein	coord: 105..174 e-value: 7.9E-18 score: 66.4 coord: 4..74 e-value: 4.6E-19 score: 70.4
None	No IPR available	PANTHER	PTHR24206:SF77	LIM DOMAIN-CONTAINING PROTEIN WLIM1-LIKE	coord: 1..185
None	No IPR available	PANTHER	PTHR24206	OS06G0237300 PROTEIN	coord: 1..185
None	No IPR available	CDD	cd09440	LIM1_SF3	coord: 6..68 e-value: 4.06306E-40 score: 129.122
None	No IPR available	CDD	cd09441	LIM2_SF3	coord: 110..170 e-value: 1.16678E-37 score: 122.964
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 36..76
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 103..135
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 136..175
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 3..35

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI02G18480.1	CSPI02G18480.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051017	actin filament bundle assembly
cellular_component	GO:0015629	actin cytoskeleton
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0051015	actin filament binding
molecular_function	GO:0046872	metal ion binding