CSPI02G18470 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI02G18470
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	F-box protein
Location	Chr2: 17107160 .. 17109618 (+)
RNA-Seq Expression	CSPI02G18470
Synteny	CSPI02G18470

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAGTAAAATAAATCAAAATGATATTTGTATCGTGATAAATCTCCAAAAGTCCTTTTAAAAAGTTAATCTAAGTATAATTTGACAAATCAATTGTGTTTACCATGAAAGTTGCAATTAATTGGATACGTTTTATTCAAAGATTGGACCATCTCTTGGAACACTCGTAAACAAATTTGAGTCGGCAAGATTTCCTGTGAGAATCTATCAAGGCATCTTCGATTCAAGAGAATAATTCCTTACGCCGATAACGAATCTTCGAGTTTGCCTCCATTTTTTTTCCTTCTAGACTTGCTCTTCCCTCACGCTCAGGAAACCCCATCTAGAAGTTTATTTGGTTAATTTCATTGGGAAAATTCAGGACCGAAATTTCAGAGAGAAATTATTCGTAGAGCTGCAAACATGGCTAATCTTAGCTCCGATTATGACGAAATGGGCTCCTTTTCCTTTACTGACTTCCCGGAAGATGTTCAGTTATGCATCCTCTCCTTCCTCTCTCCTTCCGATATAGCGACTTTCTCTTGCACATCGAAGAGATTCGTTTCTCTCTGCAGGAATGATCGGAAATTGTGGTTTACTATGTGCGACCGGAAATGGGGATCCAAGACTCAGATCAAGAATTGGGGGAAAGGGAAAATCACTTACAGGTTACTCTATAAAACTCTTCACCAGTGGGAGAATTTGATTGGTTTTTGGCGTCGGAGTGGTTCGTCAACCATCAGCGTCACATCGCCGCCGTTGGTGTTCTTCGAATGGGGCCCCGATTTTCTTGCTGGGTGTAGGGTTTCTCCGTCGAAAAACGGTACTTACGATGTATTTAAGTCACCATTTTTATGGATGACCCTCTCTTCAGAAGGTCAAGCCATGAGTTTTATCAACCTGGATGGCCGCTCTGAGTTCGCTGGGAAGTTTGCGGATTTAGGAGAATCCGATTTTTCCGATTGCGATTTGATTCCTATCGATCTGAGCTTCATGGGGAAAAATCATTTTGTCATTGAGGAAAATTTGGCATTTCCTTATCCAACTTCCCCAGAACGAAGCAAAAAAGGATTCCGCCGAAGTTCAAGTTCAGCCAATTTACTGGCGGAAGACGGTGCAGCCGCCATAACCGATGTGAGCAGAGTGGAAAGTGGCTCCCCCGGAAGCTTACCGGACCGATTAATGTCAGAAATTTATCAGCATTTTGCTAATAGAACCAGTCCTGGAGGGGACAGAGCCTCAAGGAGGCAACGGAGGAGGGAGAGGGAAAGGCTTGGAAAGAGGAAGTGGGAACCAGAGCATTTCGTTAAAATTGTCAATTGCTCACCCACACCATTGCGGCCATTACAGGGCTTATGGAAGGTGTTGTCTCCCTCCCTTACCTCCTTGTGTTTATGTACTCTTTTGGAACAGTTGTATTTTTTTTATGGGGAAATTTTGATGTTCCAAGAACTTACTACTTCTTTGAACTAGCTTGATAATTGATATACACAATACAACAAAATATTAAAGCATTGCTACACAAACTTGAGAATTTAATGGGTGGGAAACATACAAGCCATCTGATTTCAGAAAATGCGGAGGGTCGATTGAGATTTCTACGTCTCTGTAGCTAATGATCTTTGTTAAGCTCTGGTTATCTGTACCTGCTGAGTATTAGTTTCAGAAGATTTACATTTTTGTTAACTTAGTAGCTCAGCTGAATATGGAAATATGCCCCTGTTTTATGCAAGCCTGAAATAAGTTGCAAACAATCACTCTCAATCATTTATTGTCGAGGTTAGAAGTCGAGCAGCTTCATTGCATCTGTGTTCATTTTGATTTCCATTCTTGGGAGTAGTAACAAATTGATGGTTTAGTTATGTGGGATGATATAGCATGGATTCCTATTTGATCCTGCAGGGAATCAGTGAGGATTTGAGCATGGATTTCTATCTTGTTGTCTATGATGACATTGGTGGCATTGCATGTCGGAAAGTAGGAGACTCGTCCGAACGCCTCTCTAGTTATGCTCCTGTGTTTTGGACATCCAATACTACATTCTTGGAAGCTCCATTCTCTGTGGAGGAAGAATATTTGCACGACTGCCGAATACATGTTCAGCCTCTGGCAGCCAATGACATCGATGAGCTAGTGCCTTCAATTGAAAATAAAAATATTTCTCGCATTCTTTGCGTCAACTCGAGTTATGATCTAGTCCTACCTGACCTGGCTGGAAGTGCTCCAAATCCTCGGAATGTGGAGGGAAGAATTTGGCAGTACAGTAATGGGACTTTTGGGTTTGGGTTCCTTAGAGATAATTTTATTATAGACCTGAAACACCTTGCTCGAAACGGTACTATTGTGGATACTGTGGAATAATGTATTTGTTGATTCTTCTTTTAATTAACAATGTAGCCATTTGATGAATTCTTTGGCCAAGCATAATCTTTATACAATGTACAGATTGATTATGAATCATTCATATGTCAGAAGTTCACAAA

mRNA sequence

TAGTAAAATAAATCAAAATGATATTTGTATCGTGATAAATCTCCAAAAGTCCTTTTAAAAAGTTAATCTAAGTATAATTTGACAAATCAATTGTGTTTACCATGAAAGTTGCAATTAATTGGATACGTTTTATTCAAAGATTGGACCATCTCTTGGAACACTCGTAAACAAATTTGAGTCGGCAAGATTTCCTGTGAGAATCTATCAAGGCATCTTCGATTCAAGAGAATAATTCCTTACGCCGATAACGAATCTTCGAGTTTGCCTCCATTTTTTTTCCTTCTAGACTTGCTCTTCCCTCACGCTCAGGAAACCCCATCTAGAAGTTTATTTGGTTAATTTCATTGGGAAAATTCAGGACCGAAATTTCAGAGAGAAATTATTCGTAGAGCTGCAAACATGGCTAATCTTAGCTCCGATTATGACGAAATGGGCTCCTTTTCCTTTACTGACTTCCCGGAAGATGTTCAGTTATGCATCCTCTCCTTCCTCTCTCCTTCCGATATAGCGACTTTCTCTTGCACATCGAAGAGATTCGTTTCTCTCTGCAGGAATGATCGGAAATTGTGGTTTACTATGTGCGACCGGAAATGGGGATCCAAGACTCAGATCAAGAATTGGGGGAAAGGGAAAATCACTTACAGGTTACTCTATAAAACTCTTCACCAGTGGGAGAATTTGATTGGTTTTTGGCGTCGGAGTGGTTCGTCAACCATCAGCGTCACATCGCCGCCGTTGGTGTTCTTCGAATGGGGCCCCGATTTTCTTGCTGGGTGTAGGGTTTCTCCGTCGAAAAACGGTACTTACGATGTATTTAAGTCACCATTTTTATGGATGACCCTCTCTTCAGAAGGTCAAGCCATGAGTTTTATCAACCTGGATGGCCGCTCTGAGTTCGCTGGGAAGTTTGCGGATTTAGGAGAATCCGATTTTTCCGATTGCGATTTGATTCCTATCGATCTGAGCTTCATGGGGAAAAATCATTTTGTCATTGAGGAAAATTTGGCATTTCCTTATCCAACTTCCCCAGAACGAAGCAAAAAAGGATTCCGCCGAAGTTCAAGTTCAGCCAATTTACTGGCGGAAGACGGTGCAGCCGCCATAACCGATGTGAGCAGAGTGGAAAGTGGCTCCCCCGGAAGCTTACCGGACCGATTAATGTCAGAAATTTATCAGCATTTTGCTAATAGAACCAGTCCTGGAGGGGACAGAGCCTCAAGGAGGCAACGGAGGAGGGAGAGGGAAAGGCTTGGAAAGAGGAAGTGGGAACCAGAGCATTTCGTTAAAATTGTCAATTGCTCACCCACACCATTGCGGCCATTACAGGGCTTATGGAAGGGAATCAGTGAGGATTTGAGCATGGATTTCTATCTTGTTGTCTATGATGACATTGGTGGCATTGCATGTCGGAAAGTAGGAGACTCGTCCGAACGCCTCTCTAGTTATGCTCCTGTGTTTTGGACATCCAATACTACATTCTTGGAAGCTCCATTCTCTGTGGAGGAAGAATATTTGCACGACTGCCGAATACATGTTCAGCCTCTGGCAGCCAATGACATCGATGAGCTAGTGCCTTCAATTGAAAATAAAAATATTTCTCGCATTCTTTGCGTCAACTCGAGTTATGATCTAGTCCTACCTGACCTGGCTGGAAGTGCTCCAAATCCTCGGAATGTGGAGGGAAGAATTTGGCAGTACAGTAATGGGACTTTTGGGTTTGGGTTCCTTAGAGATAATTTTATTATAGACCTGAAACACCTTGCTCGAAACGGTACTATTGTGGATACTGTGGAATAATGTATTTGTTGATTCTTCTTTTAATTAACAATGTAGCCATTTGATGAATTCTTTGGCCAAGCATAATCTTTATACAATGTACAGATTGATTATGAATCATTCATATGTCAGAAGTTCACAAA

Coding sequence (CDS)

ATGGCTAATCTTAGCTCCGATTATGACGAAATGGGCTCCTTTTCCTTTACTGACTTCCCGGAAGATGTTCAGTTATGCATCCTCTCCTTCCTCTCTCCTTCCGATATAGCGACTTTCTCTTGCACATCGAAGAGATTCGTTTCTCTCTGCAGGAATGATCGGAAATTGTGGTTTACTATGTGCGACCGGAAATGGGGATCCAAGACTCAGATCAAGAATTGGGGGAAAGGGAAAATCACTTACAGGTTACTCTATAAAACTCTTCACCAGTGGGAGAATTTGATTGGTTTTTGGCGTCGGAGTGGTTCGTCAACCATCAGCGTCACATCGCCGCCGTTGGTGTTCTTCGAATGGGGCCCCGATTTTCTTGCTGGGTGTAGGGTTTCTCCGTCGAAAAACGGTACTTACGATGTATTTAAGTCACCATTTTTATGGATGACCCTCTCTTCAGAAGGTCAAGCCATGAGTTTTATCAACCTGGATGGCCGCTCTGAGTTCGCTGGGAAGTTTGCGGATTTAGGAGAATCCGATTTTTCCGATTGCGATTTGATTCCTATCGATCTGAGCTTCATGGGGAAAAATCATTTTGTCATTGAGGAAAATTTGGCATTTCCTTATCCAACTTCCCCAGAACGAAGCAAAAAAGGATTCCGCCGAAGTTCAAGTTCAGCCAATTTACTGGCGGAAGACGGTGCAGCCGCCATAACCGATGTGAGCAGAGTGGAAAGTGGCTCCCCCGGAAGCTTACCGGACCGATTAATGTCAGAAATTTATCAGCATTTTGCTAATAGAACCAGTCCTGGAGGGGACAGAGCCTCAAGGAGGCAACGGAGGAGGGAGAGGGAAAGGCTTGGAAAGAGGAAGTGGGAACCAGAGCATTTCGTTAAAATTGTCAATTGCTCACCCACACCATTGCGGCCATTACAGGGCTTATGGAAGGGAATCAGTGAGGATTTGAGCATGGATTTCTATCTTGTTGTCTATGATGACATTGGTGGCATTGCATGTCGGAAAGTAGGAGACTCGTCCGAACGCCTCTCTAGTTATGCTCCTGTGTTTTGGACATCCAATACTACATTCTTGGAAGCTCCATTCTCTGTGGAGGAAGAATATTTGCACGACTGCCGAATACATGTTCAGCCTCTGGCAGCCAATGACATCGATGAGCTAGTGCCTTCAATTGAAAATAAAAATATTTCTCGCATTCTTTGCGTCAACTCGAGTTATGATCTAGTCCTACCTGACCTGGCTGGAAGTGCTCCAAATCCTCGGAATGTGGAGGGAAGAATTTGGCAGTACAGTAATGGGACTTTTGGGTTTGGGTTCCTTAGAGATAATTTTATTATAGACCTGAAACACCTTGCTCGAAACGGTACTATTGTGGATACTGTGGAATAA

Protein sequence

MANLSSDYDEMGSFSFTDFPEDVQLCILSFLSPSDIATFSCTSKRFVSLCRNDRKLWFTMCDRKWGSKTQIKNWGKGKITYRLLYKTLHQWENLIGFWRRSGSSTISVTSPPLVFFEWGPDFLAGCRVSPSKNGTYDVFKSPFLWMTLSSEGQAMSFINLDGRSEFAGKFADLGESDFSDCDLIPIDLSFMGKNHFVIEENLAFPYPTSPERSKKGFRRSSSSANLLAEDGAAAITDVSRVESGSPGSLPDRLMSEIYQHFANRTSPGGDRASRRQRRRERERLGKRKWEPEHFVKIVNCSPTPLRPLQGLWKGISEDLSMDFYLVVYDDIGGIACRKVGDSSERLSSYAPVFWTSNTTFLEAPFSVEEEYLHDCRIHVQPLAANDIDELVPSIENKNISRILCVNSSYDLVLPDLAGSAPNPRNVEGRIWQYSNGTFGFGFLRDNFIIDLKHLARNGTIVDTVE*

Homology

[Close]

BLAST of CSPI02G18470 vs. ExPASy Swiss-Prot
Match: Q84WW1 (F-box protein At3g12350 OS=Arabidopsis thaliana OX=3702 GN=At3g12350 PE=2 SV=1)

HSP 1 Score: 398.7 bits (1023), Expect = 9.3e-110
Identity = 217/453 (47.90%), Postives = 286/453 (63.13%), Query Frame = 0


Query: 16  FTDFPEDVQLCILSFLSPSDIATFSCTSKRFVSLCRNDRKLWFTMCDRKWGSKTQIKNWG 75
           F + PED+QL ILS L+P++I++F+CTSKRF SLC+ D K+W  MCD++WG KT+I+ W 
Sbjct: 8   FCEIPEDLQLRILSLLTPAEISSFACTSKRFASLCQEDGKIWHVMCDQRWGKKTKIQKWA 67

Query: 76  KGKITYRLLYKTLHQWENLIGFWRRSGSSTISVTSPPLVFFEWGPDFLAGCRVSPSKNGT 135
            G+I YR LYKTL   ENLIGFWR  G +  + +SPPLVFF+WG  F+ G RV  + + T
Sbjct: 68  NGQIPYRHLYKTLKGLENLIGFWRLCGRANPAASSPPLVFFDWGSSFILGSRVLSTGDDT 127

Query: 136 YDVFKSPFLWMTLSSEGQAMSFINLDGRSEFAGKFADLGESDFSDCDLIPIDLSFMGKNH 195
           Y+V K+PFL M +S EG++ +F++L G         DL E + S+ +L+ +D++FMG  H
Sbjct: 128 YEVKKTPFLLMGISPEGRSENFLDLVG-GNLRSVDDDLKELEASN-NLVSVDVNFMGNGH 187

Query: 196 FVIEENLAFPYPTSPERSKKGFRRSSSSANLLAEDGAAAITDVSRVESGSPGSLPDRLMS 255
            ++EEN  F        +++  +RSS                    ES    S P+   S
Sbjct: 188 IMVEENRCF-----TNNNRREDQRSSGD------------------ESDDLISSPN--FS 247

Query: 256 EIYQHFANRTSPGGDRASRRQRRRERERLGKR-KWEPEHFVKIVNCSPTPLRPLQGLWKG 315
           E+Y   AN+TSPGGDR  RRQ+R+E+ER   R KWEPEHF+K+ +CSPTP RPLQGLWKG
Sbjct: 248 EMYTQLANKTSPGGDR--RRQKRKEKERQASRTKWEPEHFLKVADCSPTPTRPLQGLWKG 307

Query: 316 ISEDLSMDFYLVVYDDIGGIACRKVGDSSERLSSYA-PVFWTSNTTFLEAPFSVEEEYLH 375
             E  S++ YLV YD++GGI CRKV D S  LS Y  PVFWT   TF+ +PFS EEE L 
Sbjct: 308 FCEG-SIELYLVKYDEVGGIICRKVEDLS--LSRYTPPVFWTPKHTFIRSPFSAEEELLL 367

Query: 376 DCRIHVQPLAANDIDELVPSIENKNISRILCVNSSYDLVLPDLAGSAPNPRNVEGRIWQY 435
           + RIH+ P A          +    +S +L + SS DLVLP   G+       EGR+W Y
Sbjct: 368 NSRIHISPFA---------EVHENVVSGMLYMKSSCDLVLPGEPGNGIGFLRGEGRVWLY 419

Query: 436 SNGTFGFGFLRDNFIIDLKHLA-RNGTIVDTVE 466
            NGTFGFGFLRD FIIDLK +A  +G + D VE
Sbjct: 428 DNGTFGFGFLRDQFIIDLKRVALEDGCLADEVE 419

[Close]

BLAST of CSPI02G18470 vs. ExPASy TrEMBL
Match: A0A0A0LR36 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G354670 PE=4 SV=1)

HSP 1 Score: 964.9 bits (2493), Expect = 1.2e-277
Identity = 465/465 (100.00%), Postives = 465/465 (100.00%), Query Frame = 0


Query: 1   MANLSSDYDEMGSFSFTDFPEDVQLCILSFLSPSDIATFSCTSKRFVSLCRNDRKLWFTM 60
           MANLSSDYDEMGSFSFTDFPEDVQLCILSFLSPSDIATFSCTSKRFVSLCRNDRKLWFTM
Sbjct: 1   MANLSSDYDEMGSFSFTDFPEDVQLCILSFLSPSDIATFSCTSKRFVSLCRNDRKLWFTM 60

Query: 61  CDRKWGSKTQIKNWGKGKITYRLLYKTLHQWENLIGFWRRSGSSTISVTSPPLVFFEWGP 120
           CDRKWGSKTQIKNWGKGKITYRLLYKTLHQWENLIGFWRRSGSSTISVTSPPLVFFEWGP
Sbjct: 61  CDRKWGSKTQIKNWGKGKITYRLLYKTLHQWENLIGFWRRSGSSTISVTSPPLVFFEWGP 120

Query: 121 DFLAGCRVSPSKNGTYDVFKSPFLWMTLSSEGQAMSFINLDGRSEFAGKFADLGESDFSD 180
           DFLAGCRVSPSKNGTYDVFKSPFLWMTLSSEGQAMSFINLDGRSEFAGKFADLGESDFSD
Sbjct: 121 DFLAGCRVSPSKNGTYDVFKSPFLWMTLSSEGQAMSFINLDGRSEFAGKFADLGESDFSD 180

Query: 181 CDLIPIDLSFMGKNHFVIEENLAFPYPTSPERSKKGFRRSSSSANLLAEDGAAAITDVSR 240
           CDLIPIDLSFMGKNHFVIEENLAFPYPTSPERSKKGFRRSSSSANLLAEDGAAAITDVSR
Sbjct: 181 CDLIPIDLSFMGKNHFVIEENLAFPYPTSPERSKKGFRRSSSSANLLAEDGAAAITDVSR 240

Query: 241 VESGSPGSLPDRLMSEIYQHFANRTSPGGDRASRRQRRRERERLGKRKWEPEHFVKIVNC 300
           VESGSPGSLPDRLMSEIYQHFANRTSPGGDRASRRQRRRERERLGKRKWEPEHFVKIVNC
Sbjct: 241 VESGSPGSLPDRLMSEIYQHFANRTSPGGDRASRRQRRRERERLGKRKWEPEHFVKIVNC 300

Query: 301 SPTPLRPLQGLWKGISEDLSMDFYLVVYDDIGGIACRKVGDSSERLSSYAPVFWTSNTTF 360
           SPTPLRPLQGLWKGISEDLSMDFYLVVYDDIGGIACRKVGDSSERLSSYAPVFWTSNTTF
Sbjct: 301 SPTPLRPLQGLWKGISEDLSMDFYLVVYDDIGGIACRKVGDSSERLSSYAPVFWTSNTTF 360

Query: 361 LEAPFSVEEEYLHDCRIHVQPLAANDIDELVPSIENKNISRILCVNSSYDLVLPDLAGSA 420
           LEAPFSVEEEYLHDCRIHVQPLAANDIDELVPSIENKNISRILCVNSSYDLVLPDLAGSA
Sbjct: 361 LEAPFSVEEEYLHDCRIHVQPLAANDIDELVPSIENKNISRILCVNSSYDLVLPDLAGSA 420

Query: 421 PNPRNVEGRIWQYSNGTFGFGFLRDNFIIDLKHLARNGTIVDTVE 466
           PNPRNVEGRIWQYSNGTFGFGFLRDNFIIDLKHLARNGTIVDTVE
Sbjct: 421 PNPRNVEGRIWQYSNGTFGFGFLRDNFIIDLKHLARNGTIVDTVE 465

[Close]

BLAST of CSPI02G18470 vs. ExPASy TrEMBL
Match: A0A1S3BBA8 (F-box protein At3g12350 OS=Cucumis melo OX=3656 GN=LOC103487829 PE=4 SV=1)

HSP 1 Score: 934.9 bits (2415), Expect = 1.3e-268
Identity = 451/465 (96.99%), Postives = 457/465 (98.28%), Query Frame = 0


Query: 1   MANLSSDYDEMGSFSFTDFPEDVQLCILSFLSPSDIATFSCTSKRFVSLCRNDRKLWFTM 60
           MANLSSDYDEMGSFSFTDFPEDVQLCILSFLSPSDIATFSCTSKRFVSLCRNDRKLWFTM
Sbjct: 1   MANLSSDYDEMGSFSFTDFPEDVQLCILSFLSPSDIATFSCTSKRFVSLCRNDRKLWFTM 60

Query: 61  CDRKWGSKTQIKNWGKGKITYRLLYKTLHQWENLIGFWRRSGSSTISVTSPPLVFFEWGP 120
           CDRKWGSKTQIKNWGKGKITYRLLYKTLHQWENLIGFWRRSGSST SVTSPPLVFFEWGP
Sbjct: 61  CDRKWGSKTQIKNWGKGKITYRLLYKTLHQWENLIGFWRRSGSSTTSVTSPPLVFFEWGP 120

Query: 121 DFLAGCRVSPSKNGTYDVFKSPFLWMTLSSEGQAMSFINLDGRSEFAGKFADLGESDFSD 180
           DFLAG RVSPSKNGTYDVFKSPFLWMTLSS GQAMSFI+LDGRSE AGKFA+LGESD SD
Sbjct: 121 DFLAGSRVSPSKNGTYDVFKSPFLWMTLSSAGQAMSFIDLDGRSELAGKFANLGESDLSD 180

Query: 181 CDLIPIDLSFMGKNHFVIEENLAFPYPTSPERSKKGFRRSSSSANLLAEDGAAAITDVSR 240
            DLIPIDLSFMGKNHFVIEENLAFPYPTSPERSKKGFRRSSSSANLLAEDGAAA+TDVSR
Sbjct: 181 SDLIPIDLSFMGKNHFVIEENLAFPYPTSPERSKKGFRRSSSSANLLAEDGAAAVTDVSR 240

Query: 241 VESGSPGSLPDRLMSEIYQHFANRTSPGGDRASRRQRRRERERLGKRKWEPEHFVKIVNC 300
           VESGSPGSLPDRLMSEIYQHFANRTSPGGDRASRRQRRRERERLGKRKWEPEHFVKIVNC
Sbjct: 241 VESGSPGSLPDRLMSEIYQHFANRTSPGGDRASRRQRRRERERLGKRKWEPEHFVKIVNC 300

Query: 301 SPTPLRPLQGLWKGISEDLSMDFYLVVYDDIGGIACRKVGDSSERLSSYAPVFWTSNTTF 360
           SPTPLRPLQGLWKGISEDLSMDFYLVVYDDIGGIACRKVGDSSERLSSYAPVFWTSNT+F
Sbjct: 301 SPTPLRPLQGLWKGISEDLSMDFYLVVYDDIGGIACRKVGDSSERLSSYAPVFWTSNTSF 360

Query: 361 LEAPFSVEEEYLHDCRIHVQPLAANDIDELVPSIENKNISRILCVNSSYDLVLPDLAGSA 420
           LEAPFSVEEE LHDCRIHVQPLAANDIDELVPSIENKNISRILCVNSSYDLVLPDLAGS 
Sbjct: 361 LEAPFSVEEENLHDCRIHVQPLAANDIDELVPSIENKNISRILCVNSSYDLVLPDLAGST 420

Query: 421 PNPRNVEGRIWQYSNGTFGFGFLRDNFIIDLKHLARNGTIVDTVE 466
           PNPRNVEGRIWQYSNGTFGFGFLRDNFIIDLKHLARNG+I+DTVE
Sbjct: 421 PNPRNVEGRIWQYSNGTFGFGFLRDNFIIDLKHLARNGSIMDTVE 465

[Close]

BLAST of CSPI02G18470 vs. ExPASy TrEMBL
Match: A0A5A7V081 (F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G00920 PE=4 SV=1)

HSP 1 Score: 933.7 bits (2412), Expect = 3.0e-268
Identity = 450/465 (96.77%), Postives = 457/465 (98.28%), Query Frame = 0


Query: 1   MANLSSDYDEMGSFSFTDFPEDVQLCILSFLSPSDIATFSCTSKRFVSLCRNDRKLWFTM 60
           MANLSSDYDEMGSFSFTDFPEDVQLCILSFLSPSDIATFSCTSKRFVSLCRNDRKLWFTM
Sbjct: 1   MANLSSDYDEMGSFSFTDFPEDVQLCILSFLSPSDIATFSCTSKRFVSLCRNDRKLWFTM 60

Query: 61  CDRKWGSKTQIKNWGKGKITYRLLYKTLHQWENLIGFWRRSGSSTISVTSPPLVFFEWGP 120
           CDRKWGSKTQIKNWGKGKITYRLLYKTLHQWENLIGFWRRSGSST SVTSPPLVFFEWGP
Sbjct: 61  CDRKWGSKTQIKNWGKGKITYRLLYKTLHQWENLIGFWRRSGSSTTSVTSPPLVFFEWGP 120

Query: 121 DFLAGCRVSPSKNGTYDVFKSPFLWMTLSSEGQAMSFINLDGRSEFAGKFADLGESDFSD 180
           DFLAG RVSPSKNGTYDVFKSPFLW+TLSS GQAMSFI+LDGRSE AGKFA+LGESD SD
Sbjct: 121 DFLAGSRVSPSKNGTYDVFKSPFLWLTLSSAGQAMSFIDLDGRSELAGKFANLGESDLSD 180

Query: 181 CDLIPIDLSFMGKNHFVIEENLAFPYPTSPERSKKGFRRSSSSANLLAEDGAAAITDVSR 240
            DLIPIDLSFMGKNHFVIEENLAFPYPTSPERSKKGFRRSSSSANLLAEDGAAA+TDVSR
Sbjct: 181 SDLIPIDLSFMGKNHFVIEENLAFPYPTSPERSKKGFRRSSSSANLLAEDGAAAVTDVSR 240

Query: 241 VESGSPGSLPDRLMSEIYQHFANRTSPGGDRASRRQRRRERERLGKRKWEPEHFVKIVNC 300
           VESGSPGSLPDRLMSEIYQHFANRTSPGGDRASRRQRRRERERLGKRKWEPEHFVKIVNC
Sbjct: 241 VESGSPGSLPDRLMSEIYQHFANRTSPGGDRASRRQRRRERERLGKRKWEPEHFVKIVNC 300

Query: 301 SPTPLRPLQGLWKGISEDLSMDFYLVVYDDIGGIACRKVGDSSERLSSYAPVFWTSNTTF 360
           SPTPLRPLQGLWKGISEDLSMDFYLVVYDDIGGIACRKVGDSSERLSSYAPVFWTSNT+F
Sbjct: 301 SPTPLRPLQGLWKGISEDLSMDFYLVVYDDIGGIACRKVGDSSERLSSYAPVFWTSNTSF 360

Query: 361 LEAPFSVEEEYLHDCRIHVQPLAANDIDELVPSIENKNISRILCVNSSYDLVLPDLAGSA 420
           LEAPFSVEEE LHDCRIHVQPLAANDIDELVPSIENKNISRILCVNSSYDLVLPDLAGS 
Sbjct: 361 LEAPFSVEEENLHDCRIHVQPLAANDIDELVPSIENKNISRILCVNSSYDLVLPDLAGST 420

Query: 421 PNPRNVEGRIWQYSNGTFGFGFLRDNFIIDLKHLARNGTIVDTVE 466
           PNPRNVEGRIWQYSNGTFGFGFLRDNFIIDLKHLARNG+I+DTVE
Sbjct: 421 PNPRNVEGRIWQYSNGTFGFGFLRDNFIIDLKHLARNGSIMDTVE 465

[Close]

BLAST of CSPI02G18470 vs. ExPASy TrEMBL
Match: A0A6J1BQZ2 (F-box protein At3g12350 OS=Momordica charantia OX=3673 GN=LOC111004638 PE=4 SV=1)

HSP 1 Score: 861.7 bits (2225), Expect = 1.4e-246
Identity = 409/465 (87.96%), Postives = 434/465 (93.33%), Query Frame = 0


Query: 1   MANLSSDYDEMGSFSFTDFPEDVQLCILSFLSPSDIATFSCTSKRFVSLCRNDRKLWFTM 60
           M NLSS++DEMGSFSFTDFPEDVQLCILSFLSPSDIATFSCTSKRFVSLCRNDRKLWFTM
Sbjct: 1   MVNLSSEFDEMGSFSFTDFPEDVQLCILSFLSPSDIATFSCTSKRFVSLCRNDRKLWFTM 60

Query: 61  CDRKWGSKTQIKNWGKGKITYRLLYKTLHQWENLIGFWRRSGSSTISVTSPPLVFFEWGP 120
           CDR+WGSKTQIKNWGKG I YRLLYKTLHQWENLIGFWRRSG STI V+SPPLVFFEWGP
Sbjct: 61  CDRRWGSKTQIKNWGKGNIAYRLLYKTLHQWENLIGFWRRSGPSTIGVSSPPLVFFEWGP 120

Query: 121 DFLAGCRVSPSKNGTYDVFKSPFLWMTLSSEGQAMSFINLDGRSEFAGKFADLGESDFSD 180
           DFLAG RVSPSKNGTY V KSPFLWM LS EGQ M+FI+ DGRSEF+GKFAD GE   SD
Sbjct: 121 DFLAGSRVSPSKNGTYSVIKSPFLWMGLSPEGQVMNFIDPDGRSEFSGKFADWGE---SD 180

Query: 181 CDLIPIDLSFMGKNHFVIEENLAFPYPTSPERSKKGFRRSSSSANLLAEDGAAAITDVSR 240
           CDL+PID+SFMGKNHFVIEENL F YP SPE+ KKGFRRSSSSANL AED  AA TDV+ 
Sbjct: 181 CDLVPIDVSFMGKNHFVIEENLTFAYPNSPEQGKKGFRRSSSSANLRAEDAVAATTDVNG 240

Query: 241 VESGSPGSLPDRLMSEIYQHFANRTSPGGDRASRRQRRRERERLGKRKWEPEHFVKIVNC 300
           VE GSPGSLPDRLMSEIYQHFANRTSPGGDRASRRQRRRE+ERLGKRKWEPEHFVKIVNC
Sbjct: 241 VEIGSPGSLPDRLMSEIYQHFANRTSPGGDRASRRQRRREKERLGKRKWEPEHFVKIVNC 300

Query: 301 SPTPLRPLQGLWKGISEDLSMDFYLVVYDDIGGIACRKVGDSSERLSSYAPVFWTSNTTF 360
           SPTP RPLQGLWKGIS+D+SMDFYLVVYDDIGGIACR+VGDSSE++SSYAPVFWTSN TF
Sbjct: 301 SPTPSRPLQGLWKGISDDMSMDFYLVVYDDIGGIACRRVGDSSEQVSSYAPVFWTSNPTF 360

Query: 361 LEAPFSVEEEYLHDCRIHVQPLAANDIDELVPSIENKNISRILCVNSSYDLVLPDLAGSA 420
           LE+PFS+ EEYLHDCRIHV+PLAANDIDELVPSIENK ISRILCVNSSYDLVLPDLAGS 
Sbjct: 361 LESPFSLVEEYLHDCRIHVRPLAANDIDELVPSIENKTISRILCVNSSYDLVLPDLAGST 420

Query: 421 PNPRNVEGRIWQYSNGTFGFGFLRDNFIIDLKHLARNGTIVDTVE 466
           PNPRNVEGRIW+YSNGTFGFGFLRDNFIIDLKH+A+NG+I+DTVE
Sbjct: 421 PNPRNVEGRIWEYSNGTFGFGFLRDNFIIDLKHIAQNGSILDTVE 462

[Close]

BLAST of CSPI02G18470 vs. ExPASy TrEMBL
Match: A0A6J1GI95 (F-box protein At3g12350-like OS=Cucurbita moschata OX=3662 GN=LOC111454151 PE=4 SV=1)

HSP 1 Score: 825.9 bits (2132), Expect = 8.7e-236
Identity = 396/465 (85.16%), Postives = 426/465 (91.61%), Query Frame = 0


Query: 1   MANLSSDYDEMGSFSFTDFPEDVQLCILSFLSPSDIATFSCTSKRFVSLCRNDRKLWFTM 60
           MANLSS +DEMGSFSFTDFPEDVQLCILSFLSPSD+ TFSCTSKR VSLCRNDRKLWFTM
Sbjct: 1   MANLSSGFDEMGSFSFTDFPEDVQLCILSFLSPSDVVTFSCTSKRVVSLCRNDRKLWFTM 60

Query: 61  CDRKWGSKTQIKNWGKGKITYRLLYKTLHQWENLIGFWRRSGSSTISVTSPPLVFFEWGP 120
           CDR+WGSKTQIKNWGKG ITYRLLY+TL QWENL+GFWRRSGSS  SV+SPPLVFFEWG 
Sbjct: 61  CDRRWGSKTQIKNWGKGNITYRLLYRTLLQWENLLGFWRRSGSS--SVSSPPLVFFEWGS 120

Query: 121 DFLAGCRVSPSKNGTYDVFKSPFLWMTLSSEGQAMSFINLDGRSEFAGKFADLGESDFSD 180
           DFLAG RVSPS+NGTYDV KSPFLW+ LSSEG+AM FI+  G S+FAGKFADLGESDFSD
Sbjct: 121 DFLAGFRVSPSRNGTYDVVKSPFLWLGLSSEGKAMGFIDPKGCSDFAGKFADLGESDFSD 180

Query: 181 CDLIPIDLSFMGKNHFVIEENLAFPYPTSPERSKKGFRRSSSSANLLAEDGAAAITDVSR 240
           CDL+P+DLSFMGKNHFVIEEN  F YP SPE+ KKGFRRSSS ANL      AA TDV+ 
Sbjct: 181 CDLVPVDLSFMGKNHFVIEENQTFVYPNSPEQRKKGFRRSSSFANL------AAATDVNE 240

Query: 241 VESGSPGSLPDRLMSEIYQHFANRTSPGGDRASRRQRRRERERLGKRKWEPEHFVKIVNC 300
           V SGSPGSLPD+LMSEIYQHFANRTSPGGDRASRRQRRRE+ERLGK+KWEPEHFVKIVNC
Sbjct: 241 VASGSPGSLPDQLMSEIYQHFANRTSPGGDRASRRQRRREKERLGKKKWEPEHFVKIVNC 300

Query: 301 SPTPLRPLQGLWKGISEDLSMDFYLVVYDDIGGIACRKVGDSSERLSSYAPVFWTSNTTF 360
           SPTPLRPLQGLWKGIS+D+SMDFYLVVYDDIGGI+CR+V DSSER SS APVFWTSNTTF
Sbjct: 301 SPTPLRPLQGLWKGISDDMSMDFYLVVYDDIGGISCRRVRDSSERFSSNAPVFWTSNTTF 360

Query: 361 LEAPFSVEEEYLHDCRIHVQPLAANDIDELVPSIENKNISRILCVNSSYDLVLPDLAGSA 420
           LE PFS+EEE L+DCRIHV+PL ANDI+ELVPSIENK ISRILCVNSSYDLVLPDLAGS 
Sbjct: 361 LETPFSLEEELLYDCRIHVRPLPANDIEELVPSIENKKISRILCVNSSYDLVLPDLAGSI 420

Query: 421 PNPRNVEGRIWQYSNGTFGFGFLRDNFIIDLKHLARNGTIVDTVE 466
           PNPRNVEGRIWQY+NGTFGFGFLRDNFIIDL+H+ARNG I+DTVE
Sbjct: 421 PNPRNVEGRIWQYNNGTFGFGFLRDNFIIDLQHIARNGLILDTVE 457

[Close]

BLAST of CSPI02G18470 vs. NCBI nr
Match: XP_004142896.1 (F-box protein At3g12350 [Cucumis sativus] >KGN62441.1 hypothetical protein Csa_018642 [Cucumis sativus])

HSP 1 Score: 964.9 bits (2493), Expect = 2.5e-277
Identity = 465/465 (100.00%), Postives = 465/465 (100.00%), Query Frame = 0


Query: 1   MANLSSDYDEMGSFSFTDFPEDVQLCILSFLSPSDIATFSCTSKRFVSLCRNDRKLWFTM 60
           MANLSSDYDEMGSFSFTDFPEDVQLCILSFLSPSDIATFSCTSKRFVSLCRNDRKLWFTM
Sbjct: 1   MANLSSDYDEMGSFSFTDFPEDVQLCILSFLSPSDIATFSCTSKRFVSLCRNDRKLWFTM 60

Query: 61  CDRKWGSKTQIKNWGKGKITYRLLYKTLHQWENLIGFWRRSGSSTISVTSPPLVFFEWGP 120
           CDRKWGSKTQIKNWGKGKITYRLLYKTLHQWENLIGFWRRSGSSTISVTSPPLVFFEWGP
Sbjct: 61  CDRKWGSKTQIKNWGKGKITYRLLYKTLHQWENLIGFWRRSGSSTISVTSPPLVFFEWGP 120

Query: 121 DFLAGCRVSPSKNGTYDVFKSPFLWMTLSSEGQAMSFINLDGRSEFAGKFADLGESDFSD 180
           DFLAGCRVSPSKNGTYDVFKSPFLWMTLSSEGQAMSFINLDGRSEFAGKFADLGESDFSD
Sbjct: 121 DFLAGCRVSPSKNGTYDVFKSPFLWMTLSSEGQAMSFINLDGRSEFAGKFADLGESDFSD 180

Query: 181 CDLIPIDLSFMGKNHFVIEENLAFPYPTSPERSKKGFRRSSSSANLLAEDGAAAITDVSR 240
           CDLIPIDLSFMGKNHFVIEENLAFPYPTSPERSKKGFRRSSSSANLLAEDGAAAITDVSR
Sbjct: 181 CDLIPIDLSFMGKNHFVIEENLAFPYPTSPERSKKGFRRSSSSANLLAEDGAAAITDVSR 240

Query: 241 VESGSPGSLPDRLMSEIYQHFANRTSPGGDRASRRQRRRERERLGKRKWEPEHFVKIVNC 300
           VESGSPGSLPDRLMSEIYQHFANRTSPGGDRASRRQRRRERERLGKRKWEPEHFVKIVNC
Sbjct: 241 VESGSPGSLPDRLMSEIYQHFANRTSPGGDRASRRQRRRERERLGKRKWEPEHFVKIVNC 300

Query: 301 SPTPLRPLQGLWKGISEDLSMDFYLVVYDDIGGIACRKVGDSSERLSSYAPVFWTSNTTF 360
           SPTPLRPLQGLWKGISEDLSMDFYLVVYDDIGGIACRKVGDSSERLSSYAPVFWTSNTTF
Sbjct: 301 SPTPLRPLQGLWKGISEDLSMDFYLVVYDDIGGIACRKVGDSSERLSSYAPVFWTSNTTF 360

Query: 361 LEAPFSVEEEYLHDCRIHVQPLAANDIDELVPSIENKNISRILCVNSSYDLVLPDLAGSA 420
           LEAPFSVEEEYLHDCRIHVQPLAANDIDELVPSIENKNISRILCVNSSYDLVLPDLAGSA
Sbjct: 361 LEAPFSVEEEYLHDCRIHVQPLAANDIDELVPSIENKNISRILCVNSSYDLVLPDLAGSA 420

Query: 421 PNPRNVEGRIWQYSNGTFGFGFLRDNFIIDLKHLARNGTIVDTVE 466
           PNPRNVEGRIWQYSNGTFGFGFLRDNFIIDLKHLARNGTIVDTVE
Sbjct: 421 PNPRNVEGRIWQYSNGTFGFGFLRDNFIIDLKHLARNGTIVDTVE 465

[Close]

BLAST of CSPI02G18470 vs. NCBI nr
Match: XP_008444539.1 (PREDICTED: F-box protein At3g12350 [Cucumis melo])

HSP 1 Score: 934.9 bits (2415), Expect = 2.7e-268
Identity = 451/465 (96.99%), Postives = 457/465 (98.28%), Query Frame = 0


Query: 1   MANLSSDYDEMGSFSFTDFPEDVQLCILSFLSPSDIATFSCTSKRFVSLCRNDRKLWFTM 60
           MANLSSDYDEMGSFSFTDFPEDVQLCILSFLSPSDIATFSCTSKRFVSLCRNDRKLWFTM
Sbjct: 1   MANLSSDYDEMGSFSFTDFPEDVQLCILSFLSPSDIATFSCTSKRFVSLCRNDRKLWFTM 60

Query: 61  CDRKWGSKTQIKNWGKGKITYRLLYKTLHQWENLIGFWRRSGSSTISVTSPPLVFFEWGP 120
           CDRKWGSKTQIKNWGKGKITYRLLYKTLHQWENLIGFWRRSGSST SVTSPPLVFFEWGP
Sbjct: 61  CDRKWGSKTQIKNWGKGKITYRLLYKTLHQWENLIGFWRRSGSSTTSVTSPPLVFFEWGP 120

Query: 121 DFLAGCRVSPSKNGTYDVFKSPFLWMTLSSEGQAMSFINLDGRSEFAGKFADLGESDFSD 180
           DFLAG RVSPSKNGTYDVFKSPFLWMTLSS GQAMSFI+LDGRSE AGKFA+LGESD SD
Sbjct: 121 DFLAGSRVSPSKNGTYDVFKSPFLWMTLSSAGQAMSFIDLDGRSELAGKFANLGESDLSD 180

Query: 181 CDLIPIDLSFMGKNHFVIEENLAFPYPTSPERSKKGFRRSSSSANLLAEDGAAAITDVSR 240
            DLIPIDLSFMGKNHFVIEENLAFPYPTSPERSKKGFRRSSSSANLLAEDGAAA+TDVSR
Sbjct: 181 SDLIPIDLSFMGKNHFVIEENLAFPYPTSPERSKKGFRRSSSSANLLAEDGAAAVTDVSR 240

Query: 241 VESGSPGSLPDRLMSEIYQHFANRTSPGGDRASRRQRRRERERLGKRKWEPEHFVKIVNC 300
           VESGSPGSLPDRLMSEIYQHFANRTSPGGDRASRRQRRRERERLGKRKWEPEHFVKIVNC
Sbjct: 241 VESGSPGSLPDRLMSEIYQHFANRTSPGGDRASRRQRRRERERLGKRKWEPEHFVKIVNC 300

Query: 301 SPTPLRPLQGLWKGISEDLSMDFYLVVYDDIGGIACRKVGDSSERLSSYAPVFWTSNTTF 360
           SPTPLRPLQGLWKGISEDLSMDFYLVVYDDIGGIACRKVGDSSERLSSYAPVFWTSNT+F
Sbjct: 301 SPTPLRPLQGLWKGISEDLSMDFYLVVYDDIGGIACRKVGDSSERLSSYAPVFWTSNTSF 360

Query: 361 LEAPFSVEEEYLHDCRIHVQPLAANDIDELVPSIENKNISRILCVNSSYDLVLPDLAGSA 420
           LEAPFSVEEE LHDCRIHVQPLAANDIDELVPSIENKNISRILCVNSSYDLVLPDLAGS 
Sbjct: 361 LEAPFSVEEENLHDCRIHVQPLAANDIDELVPSIENKNISRILCVNSSYDLVLPDLAGST 420

Query: 421 PNPRNVEGRIWQYSNGTFGFGFLRDNFIIDLKHLARNGTIVDTVE 466
           PNPRNVEGRIWQYSNGTFGFGFLRDNFIIDLKHLARNG+I+DTVE
Sbjct: 421 PNPRNVEGRIWQYSNGTFGFGFLRDNFIIDLKHLARNGSIMDTVE 465

[Close]

BLAST of CSPI02G18470 vs. NCBI nr
Match: KAA0060958.1 (F-box protein [Cucumis melo var. makuwa])

HSP 1 Score: 933.7 bits (2412), Expect = 6.1e-268
Identity = 450/465 (96.77%), Postives = 457/465 (98.28%), Query Frame = 0


Query: 1   MANLSSDYDEMGSFSFTDFPEDVQLCILSFLSPSDIATFSCTSKRFVSLCRNDRKLWFTM 60
           MANLSSDYDEMGSFSFTDFPEDVQLCILSFLSPSDIATFSCTSKRFVSLCRNDRKLWFTM
Sbjct: 1   MANLSSDYDEMGSFSFTDFPEDVQLCILSFLSPSDIATFSCTSKRFVSLCRNDRKLWFTM 60

Query: 61  CDRKWGSKTQIKNWGKGKITYRLLYKTLHQWENLIGFWRRSGSSTISVTSPPLVFFEWGP 120
           CDRKWGSKTQIKNWGKGKITYRLLYKTLHQWENLIGFWRRSGSST SVTSPPLVFFEWGP
Sbjct: 61  CDRKWGSKTQIKNWGKGKITYRLLYKTLHQWENLIGFWRRSGSSTTSVTSPPLVFFEWGP 120

Query: 121 DFLAGCRVSPSKNGTYDVFKSPFLWMTLSSEGQAMSFINLDGRSEFAGKFADLGESDFSD 180
           DFLAG RVSPSKNGTYDVFKSPFLW+TLSS GQAMSFI+LDGRSE AGKFA+LGESD SD
Sbjct: 121 DFLAGSRVSPSKNGTYDVFKSPFLWLTLSSAGQAMSFIDLDGRSELAGKFANLGESDLSD 180

Query: 181 CDLIPIDLSFMGKNHFVIEENLAFPYPTSPERSKKGFRRSSSSANLLAEDGAAAITDVSR 240
            DLIPIDLSFMGKNHFVIEENLAFPYPTSPERSKKGFRRSSSSANLLAEDGAAA+TDVSR
Sbjct: 181 SDLIPIDLSFMGKNHFVIEENLAFPYPTSPERSKKGFRRSSSSANLLAEDGAAAVTDVSR 240

Query: 241 VESGSPGSLPDRLMSEIYQHFANRTSPGGDRASRRQRRRERERLGKRKWEPEHFVKIVNC 300
           VESGSPGSLPDRLMSEIYQHFANRTSPGGDRASRRQRRRERERLGKRKWEPEHFVKIVNC
Sbjct: 241 VESGSPGSLPDRLMSEIYQHFANRTSPGGDRASRRQRRRERERLGKRKWEPEHFVKIVNC 300

Query: 301 SPTPLRPLQGLWKGISEDLSMDFYLVVYDDIGGIACRKVGDSSERLSSYAPVFWTSNTTF 360
           SPTPLRPLQGLWKGISEDLSMDFYLVVYDDIGGIACRKVGDSSERLSSYAPVFWTSNT+F
Sbjct: 301 SPTPLRPLQGLWKGISEDLSMDFYLVVYDDIGGIACRKVGDSSERLSSYAPVFWTSNTSF 360

Query: 361 LEAPFSVEEEYLHDCRIHVQPLAANDIDELVPSIENKNISRILCVNSSYDLVLPDLAGSA 420
           LEAPFSVEEE LHDCRIHVQPLAANDIDELVPSIENKNISRILCVNSSYDLVLPDLAGS 
Sbjct: 361 LEAPFSVEEENLHDCRIHVQPLAANDIDELVPSIENKNISRILCVNSSYDLVLPDLAGST 420

Query: 421 PNPRNVEGRIWQYSNGTFGFGFLRDNFIIDLKHLARNGTIVDTVE 466
           PNPRNVEGRIWQYSNGTFGFGFLRDNFIIDLKHLARNG+I+DTVE
Sbjct: 421 PNPRNVEGRIWQYSNGTFGFGFLRDNFIIDLKHLARNGSIMDTVE 465

[Close]

BLAST of CSPI02G18470 vs. NCBI nr
Match: XP_038886422.1 (F-box protein At3g12350 [Benincasa hispida])

HSP 1 Score: 908.7 bits (2347), Expect = 2.1e-260
Identity = 433/465 (93.12%), Postives = 449/465 (96.56%), Query Frame = 0


Query: 1   MANLSSDYDEMGSFSFTDFPEDVQLCILSFLSPSDIATFSCTSKRFVSLCRNDRKLWFTM 60
           MANLSS+YDEMGSFSFTDFPEDVQLCILSFLSPSDIATFSCTSKRFVSLCRNDRKLWFTM
Sbjct: 1   MANLSSEYDEMGSFSFTDFPEDVQLCILSFLSPSDIATFSCTSKRFVSLCRNDRKLWFTM 60

Query: 61  CDRKWGSKTQIKNWGKGKITYRLLYKTLHQWENLIGFWRRSGSSTISVTSPPLVFFEWGP 120
           CDRKWGSKTQI NWGKGKITYRLLYKTLHQWENLIGFWRRSGSSTIS TSPPLVFFEWGP
Sbjct: 61  CDRKWGSKTQINNWGKGKITYRLLYKTLHQWENLIGFWRRSGSSTISNTSPPLVFFEWGP 120

Query: 121 DFLAGCRVSPSKNGTYDVFKSPFLWMTLSSEGQAMSFINLDGRSEFAGKFADLGESDFSD 180
           DFLAG RVSPSKNGTYDVFKSPFLW+ LSSEGQAMSFI+ DGRSEFAGKFADLG+S FSD
Sbjct: 121 DFLAGSRVSPSKNGTYDVFKSPFLWIGLSSEGQAMSFIDPDGRSEFAGKFADLGDSGFSD 180

Query: 181 CDLIPIDLSFMGKNHFVIEENLAFPYPTSPERSKKGFRRSSSSANLLAEDGAAAITDVSR 240
           CDLIPIDLSFMGKNHFVIEENL F YPTSPE+ KKGFRRSSSSANL AEDG AA+TDV+ 
Sbjct: 181 CDLIPIDLSFMGKNHFVIEENLTFAYPTSPEQRKKGFRRSSSSANLRAEDGVAAVTDVNG 240

Query: 241 VESGSPGSLPDRLMSEIYQHFANRTSPGGDRASRRQRRRERERLGKRKWEPEHFVKIVNC 300
           VESGSPGSLPDRLMSEIYQHFANRTSPGGDRASRRQRRRE+ERLGKRKWEPEHFVKI+NC
Sbjct: 241 VESGSPGSLPDRLMSEIYQHFANRTSPGGDRASRRQRRREKERLGKRKWEPEHFVKIINC 300

Query: 301 SPTPLRPLQGLWKGISEDLSMDFYLVVYDDIGGIACRKVGDSSERLSSYAPVFWTSNTTF 360
           SPTPLRPLQGLWKGIS+DLSMDFYLVVYDDIGGIACR+VGDSSERLSSYAPVFWTSNTTF
Sbjct: 301 SPTPLRPLQGLWKGISDDLSMDFYLVVYDDIGGIACRRVGDSSERLSSYAPVFWTSNTTF 360

Query: 361 LEAPFSVEEEYLHDCRIHVQPLAANDIDELVPSIENKNISRILCVNSSYDLVLPDLAGSA 420
           LEAPFS EEEYLHDCR+HVQPLAANDI+ELVPSIEN +ISRILCVNSSYDLVLPDLAGS 
Sbjct: 361 LEAPFSAEEEYLHDCRVHVQPLAANDIEELVPSIENNSISRILCVNSSYDLVLPDLAGST 420

Query: 421 PNPRNVEGRIWQYSNGTFGFGFLRDNFIIDLKHLARNGTIVDTVE 466
           PNPRNVEGRIWQY NGTFGFGFLRDNFIIDLKHLARNG+I+DTVE
Sbjct: 421 PNPRNVEGRIWQYCNGTFGFGFLRDNFIIDLKHLARNGSILDTVE 465

[Close]

BLAST of CSPI02G18470 vs. NCBI nr
Match: XP_022131422.1 (F-box protein At3g12350 [Momordica charantia] >XP_022131423.1 F-box protein At3g12350 [Momordica charantia])

HSP 1 Score: 861.7 bits (2225), Expect = 2.9e-246
Identity = 409/465 (87.96%), Postives = 434/465 (93.33%), Query Frame = 0


Query: 1   MANLSSDYDEMGSFSFTDFPEDVQLCILSFLSPSDIATFSCTSKRFVSLCRNDRKLWFTM 60
           M NLSS++DEMGSFSFTDFPEDVQLCILSFLSPSDIATFSCTSKRFVSLCRNDRKLWFTM
Sbjct: 1   MVNLSSEFDEMGSFSFTDFPEDVQLCILSFLSPSDIATFSCTSKRFVSLCRNDRKLWFTM 60

Query: 61  CDRKWGSKTQIKNWGKGKITYRLLYKTLHQWENLIGFWRRSGSSTISVTSPPLVFFEWGP 120
           CDR+WGSKTQIKNWGKG I YRLLYKTLHQWENLIGFWRRSG STI V+SPPLVFFEWGP
Sbjct: 61  CDRRWGSKTQIKNWGKGNIAYRLLYKTLHQWENLIGFWRRSGPSTIGVSSPPLVFFEWGP 120

Query: 121 DFLAGCRVSPSKNGTYDVFKSPFLWMTLSSEGQAMSFINLDGRSEFAGKFADLGESDFSD 180
           DFLAG RVSPSKNGTY V KSPFLWM LS EGQ M+FI+ DGRSEF+GKFAD GE   SD
Sbjct: 121 DFLAGSRVSPSKNGTYSVIKSPFLWMGLSPEGQVMNFIDPDGRSEFSGKFADWGE---SD 180

Query: 181 CDLIPIDLSFMGKNHFVIEENLAFPYPTSPERSKKGFRRSSSSANLLAEDGAAAITDVSR 240
           CDL+PID+SFMGKNHFVIEENL F YP SPE+ KKGFRRSSSSANL AED  AA TDV+ 
Sbjct: 181 CDLVPIDVSFMGKNHFVIEENLTFAYPNSPEQGKKGFRRSSSSANLRAEDAVAATTDVNG 240

Query: 241 VESGSPGSLPDRLMSEIYQHFANRTSPGGDRASRRQRRRERERLGKRKWEPEHFVKIVNC 300
           VE GSPGSLPDRLMSEIYQHFANRTSPGGDRASRRQRRRE+ERLGKRKWEPEHFVKIVNC
Sbjct: 241 VEIGSPGSLPDRLMSEIYQHFANRTSPGGDRASRRQRRREKERLGKRKWEPEHFVKIVNC 300

Query: 301 SPTPLRPLQGLWKGISEDLSMDFYLVVYDDIGGIACRKVGDSSERLSSYAPVFWTSNTTF 360
           SPTP RPLQGLWKGIS+D+SMDFYLVVYDDIGGIACR+VGDSSE++SSYAPVFWTSN TF
Sbjct: 301 SPTPSRPLQGLWKGISDDMSMDFYLVVYDDIGGIACRRVGDSSEQVSSYAPVFWTSNPTF 360

Query: 361 LEAPFSVEEEYLHDCRIHVQPLAANDIDELVPSIENKNISRILCVNSSYDLVLPDLAGSA 420
           LE+PFS+ EEYLHDCRIHV+PLAANDIDELVPSIENK ISRILCVNSSYDLVLPDLAGS 
Sbjct: 361 LESPFSLVEEYLHDCRIHVRPLAANDIDELVPSIENKTISRILCVNSSYDLVLPDLAGST 420

Query: 421 PNPRNVEGRIWQYSNGTFGFGFLRDNFIIDLKHLARNGTIVDTVE 466
           PNPRNVEGRIW+YSNGTFGFGFLRDNFIIDLKH+A+NG+I+DTVE
Sbjct: 421 PNPRNVEGRIWEYSNGTFGFGFLRDNFIIDLKHIAQNGSILDTVE 462

[Close]

BLAST of CSPI02G18470 vs. TAIR 10
Match: AT3G12350.1 (F-box family protein )

HSP 1 Score: 398.7 bits (1023), Expect = 6.6e-111
Identity = 217/453 (47.90%), Postives = 286/453 (63.13%), Query Frame = 0


Query: 16  FTDFPEDVQLCILSFLSPSDIATFSCTSKRFVSLCRNDRKLWFTMCDRKWGSKTQIKNWG 75
           F + PED+QL ILS L+P++I++F+CTSKRF SLC+ D K+W  MCD++WG KT+I+ W 
Sbjct: 8   FCEIPEDLQLRILSLLTPAEISSFACTSKRFASLCQEDGKIWHVMCDQRWGKKTKIQKWA 67

Query: 76  KGKITYRLLYKTLHQWENLIGFWRRSGSSTISVTSPPLVFFEWGPDFLAGCRVSPSKNGT 135
            G+I YR LYKTL   ENLIGFWR  G +  + +SPPLVFF+WG  F+ G RV  + + T
Sbjct: 68  NGQIPYRHLYKTLKGLENLIGFWRLCGRANPAASSPPLVFFDWGSSFILGSRVLSTGDDT 127

Query: 136 YDVFKSPFLWMTLSSEGQAMSFINLDGRSEFAGKFADLGESDFSDCDLIPIDLSFMGKNH 195
           Y+V K+PFL M +S EG++ +F++L G         DL E + S+ +L+ +D++FMG  H
Sbjct: 128 YEVKKTPFLLMGISPEGRSENFLDLVG-GNLRSVDDDLKELEASN-NLVSVDVNFMGNGH 187

Query: 196 FVIEENLAFPYPTSPERSKKGFRRSSSSANLLAEDGAAAITDVSRVESGSPGSLPDRLMS 255
            ++EEN  F        +++  +RSS                    ES    S P+   S
Sbjct: 188 IMVEENRCF-----TNNNRREDQRSSGD------------------ESDDLISSPN--FS 247

Query: 256 EIYQHFANRTSPGGDRASRRQRRRERERLGKR-KWEPEHFVKIVNCSPTPLRPLQGLWKG 315
           E+Y   AN+TSPGGDR  RRQ+R+E+ER   R KWEPEHF+K+ +CSPTP RPLQGLWKG
Sbjct: 248 EMYTQLANKTSPGGDR--RRQKRKEKERQASRTKWEPEHFLKVADCSPTPTRPLQGLWKG 307

Query: 316 ISEDLSMDFYLVVYDDIGGIACRKVGDSSERLSSYA-PVFWTSNTTFLEAPFSVEEEYLH 375
             E  S++ YLV YD++GGI CRKV D S  LS Y  PVFWT   TF+ +PFS EEE L 
Sbjct: 308 FCEG-SIELYLVKYDEVGGIICRKVEDLS--LSRYTPPVFWTPKHTFIRSPFSAEEELLL 367

Query: 376 DCRIHVQPLAANDIDELVPSIENKNISRILCVNSSYDLVLPDLAGSAPNPRNVEGRIWQY 435
           + RIH+ P A          +    +S +L + SS DLVLP   G+       EGR+W Y
Sbjct: 368 NSRIHISPFA---------EVHENVVSGMLYMKSSCDLVLPGEPGNGIGFLRGEGRVWLY 419

Query: 436 SNGTFGFGFLRDNFIIDLKHLA-RNGTIVDTVE 466
            NGTFGFGFLRD FIIDLK +A  +G + D VE
Sbjct: 428 DNGTFGFGFLRDQFIIDLKRVALEDGCLADEVE 419

[Close]

BLAST of CSPI02G18470 vs. TAIR 10
Match: AT3G12350.2 (F-box family protein )

HSP 1 Score: 268.1 bits (684), Expect = 1.3e-71
Identity = 143/317 (45.11%), Postives = 201/317 (63.41%), Query Frame = 0


Query: 16  FTDFPEDVQLCILSFLSPSDIATFSCTSKRFVSLCRNDRKLWFTMCDRKWGSKTQIKNWG 75
           F + PED+QL ILS L+P++I++F+CTSKRF SLC+ D K+W  MCD++WG KT+I+ W 
Sbjct: 8   FCEIPEDLQLRILSLLTPAEISSFACTSKRFASLCQEDGKIWHVMCDQRWGKKTKIQKWA 67

Query: 76  KGKITYRLLYKTLHQWENLIGFWRRSGSSTISVTSPPLVFFEWGPDFLAGCRVSPSKNGT 135
            G+I YR LYKTL   ENLIGFWR  G +  + +SPPLVFF+WG  F+ G RV  + + T
Sbjct: 68  NGQIPYRHLYKTLKGLENLIGFWRLCGRANPAASSPPLVFFDWGSSFILGSRVLSTGDDT 127

Query: 136 YDVFKSPFLWMTLSSEGQAMSFINLDGRSEFAGKFADLGESDFSDCDLIPIDLSFMGKNH 195
           Y+V K+PFL M +S EG++ +F++L G         DL E + S+ +L+ +D++FMG  H
Sbjct: 128 YEVKKTPFLLMGISPEGRSENFLDLVG-GNLRSVDDDLKELEASN-NLVSVDVNFMGNGH 187

Query: 196 FVIEENLAFPYPTSPERSKKGFRRSSSSANLLAEDGAAAITDVSRVESGSPGSLPDRLMS 255
            ++EEN  F        +++  +RSS                    ES    S P+   S
Sbjct: 188 IMVEENRCF-----TNNNRREDQRSSGD------------------ESDDLISSPN--FS 247

Query: 256 EIYQHFANRTSPGGDRASRRQRRRERERLGKR-KWEPEHFVKIVNCSPTPLRPLQGLWKG 315
           E+Y   AN+TSPGGDR  RRQ+R+E+ER   R KWEPEHF+K+ +CSPTP RPLQGLWK 
Sbjct: 248 EMYTQLANKTSPGGDR--RRQKRKEKERQASRTKWEPEHFLKVADCSPTPTRPLQGLWK- 292

Query: 316 ISEDLSMDFYLVVYDDI 332
               +   +++V  D++
Sbjct: 308 --VSIITPYHIVFIDNV 292

[Close]

BLAST of CSPI02G18470 vs. TAIR 10
Match: AT5G39490.1 (F-box family protein )

HSP 1 Score: 42.7 bits (99), Expect = 9.2e-04
Identity = 34/115 (29.57%), Postives = 51/115 (44.35%), Query Frame = 0


Query: 20  PEDVQLCILSFLSPSDIATFSCTSKRFVSLCRNDRKLWFTMCDR-KWGSKTQIKNWGKGK 79
           PED+ + I  FLSPSDI       K   +L  +  K W   C+  K     +I  W  G 
Sbjct: 15  PEDIFVVISRFLSPSDICNLILCGKSLRALV-DSEKTWLVQCEEVKVLPLLEIVQWRIGI 74

Query: 80  ITYRLLYKTLHQ-WENLIGFWRRSGSSTISVTSPPLVFFEWGPDFLAGCRVSPSK 133
            +Y+ L + L +  + L+G W +      +V     V+   G   + GCR+ P K
Sbjct: 75  SSYKALCRFLVEVVKPLLGIWVQQNPELGNV-----VYVMPGFLSVVGCRIIPQK 123

The following BLAST results are available for this feature:

BLAST of CSPI02G18470 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84WW1	9.3e-110	47.90	F-box protein At3g12350 OS=Arabidopsis thaliana OX=3702 GN=At3g12350 PE=2 SV=1	[more]

BLAST of CSPI02G18470 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LR36	1.2e-277	100.00	F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G354670 PE=4 ...	[more]
A0A1S3BBA8	1.3e-268	96.99	F-box protein At3g12350 OS=Cucumis melo OX=3656 GN=LOC103487829 PE=4 SV=1	[more]
A0A5A7V081	3.0e-268	96.77	F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G00920 ...	[more]
A0A6J1BQZ2	1.4e-246	87.96	F-box protein At3g12350 OS=Momordica charantia OX=3673 GN=LOC111004638 PE=4 SV=1	[more]
A0A6J1GI95	8.7e-236	85.16	F-box protein At3g12350-like OS=Cucurbita moschata OX=3662 GN=LOC111454151 PE=4 ...	[more]

BLAST of CSPI02G18470 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004142896.1	2.5e-277	100.00	F-box protein At3g12350 [Cucumis sativus] >KGN62441.1 hypothetical protein Csa_0...	[more]
XP_008444539.1	2.7e-268	96.99	PREDICTED: F-box protein At3g12350 [Cucumis melo]	[more]
KAA0060958.1	6.1e-268	96.77	F-box protein [Cucumis melo var. makuwa]	[more]
XP_038886422.1	2.1e-260	93.12	F-box protein At3g12350 [Benincasa hispida]	[more]
XP_022131422.1	2.9e-246	87.96	F-box protein At3g12350 [Momordica charantia] >XP_022131423.1 F-box protein At3g...	[more]

BLAST of CSPI02G18470 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G12350.1	6.6e-111	47.90	F-box family protein	[more]
AT3G12350.2	1.3e-71	45.11	F-box family protein	[more]
AT5G39490.1	9.2e-04	29.57	F-box family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001810	F-box domain	SMART	SM00256	fbox_2	coord: 19..60 e-value: 1.5E-5 score: 34.5
IPR001810	F-box domain	PFAM	PF00646	F-box	coord: 14..55 e-value: 1.2E-7 score: 31.4
IPR001810	F-box domain	PROSITE	PS50181	FBOX	coord: 13..60 score: 11.48455
None	No IPR available	GENE3D	1.20.1280.50		coord: 8..93 e-value: 3.1E-9 score: 38.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 270..285
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 263..285
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 9..92

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI02G18470.1	CSPI02G18470.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane
molecular_function	GO:0005515	protein binding