CSPI02G18210 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI02G18210
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Myb transcription factor
Location	Chr2: 16895658 .. 16897283 (-)
RNA-Seq Expression	CSPI02G18210
Synteny	CSPI02G18210

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATAAACAAGCTTATAAGAAAGGGAGAAACGTACAAAGTCAAGCTAGATTCTATTTAGCTCTCACAATCCTCAGCCAAAATCAGAAGGGGAAATTATTGCGGTTGAGTGAGCTGGTTTTGGAATTTAAAGCATTTAGCTACAGAACTCTTGCCCCCATTTATCCTTGGAAGGCAAAGGGGGCAATGGGAAGAGCTCCATGTTGTGAGAAAGGCAAGGTGAAGAAAGGGCCTTGGTCTCCTGATGAGGACGCCATTCTCAAAAGTTATGTAGAAACTCATGGCATTGCTGGTACCTGGATTGCTCTGCCTACTAAAGCTGGTTTAATCTCTTGCTTTTCTCTTCACTTTTATCAGAACTAACACCAATTTTTTTAGTTTGGTATTCTCTGTCGTTTGTTTGTTTCTGTAATGCAATGTTTTGAAAGAAAAAAGAAACAAAAAAACTGCAGGGTTGAAGAGATGTGGGAAAAGTTGTAGGTTAAGATGGCTAAACTATCTCAGACCCAATATCAAGCATGGGGAATTTACAGAAGAGGAAGACAATGTCATTTTTAATCTCTACAATCAATATGGAAGCAGGCAAGTTTGGTATTTTTTTTTCCAAGCCAGGATAAATCTTAAACAAGGATTCAGATTTGAACTTTACAAAGCTTACACAAAAAGGAAATTTAAATCTTGGATTATTTCTTAGTTTCTATAAGATAGTCATGAGTAGCTCTGTATGATTCTGCTTTCTTACCATTTGTTTTTACCATGGTGTTTATCTTTCTAAAGTAACATTACCAAAATTTAAGCATTTAAAAGTTAAAAAGATCCATTTTGATAACCATATGTTTTTTTTTACTTTTGGTACATTTCATAGTTTCGTTTCCCTACCAATGTTTTTAAAAATCAAAACAAGTTTTTAAAACTAAAGATGATAGGTTTTGTTGTTTTTGTTTTTGAAATTTGCACAAATGTTAAGAACAAACAACAGTGAAGATGTCCGAGAGGGAACAAACATATATTTTCAGAAAAGAATAACTTAAGAAGAAAATTGTTATGAAATGAAACCTCAGATACTTTTGTTTTCTTCTAAACTTCATGATATGTTTTCACATCTCTGTAAAGAAATATTTGAACTTTTAATCAAATTCAAGTTGTTGGTCAGATGGTCTACCATAGCCTCTCAACTCCCAGGTAGAACAGACAATGATGTAAAAAACCATTGGAATACTAAACTGAAGAAGAAGAAGAAGAAGCTGTTCCTTGCAGCCAAAACCCAGAGTCATCTTCACTCACAATCCCCACTCCTACATACACAAGAAACAGACTTCACTGAAATTATTAACCACACACCAATCTCATGCATTGCTGCATTAGACAACTCAGTCGATCAGTTCCAGATTCCCACAGTTTCCGAACCGGGTGCCGGTAGTGACAGTAGAGATCAATGGAGTTCAATGGAACCATGGGGCTGTGATTTCCCAGCAGACATGATATGCAGCATGTTGTTTTAAGGAGAAAAAAAAAATAGTGAGTTGGAAAGATGGTTGTTTAGTAGGCTATTGATAATATATGAACACAATGCTACTACGTAATAACCGTTCCATTTGAATCCTAAAATTTGTATGCTTTTTGTATTAT

mRNA sequence

AATAAACAAGCTTATAAGAAAGGGAGAAACGTACAAAGTCAAGCTAGATTCTATTTAGCTCTCACAATCCTCAGCCAAAATCAGAAGGGGAAATTATTGCGGTTGAGTGAGCTGGTTTTGGAATTTAAAGCATTTAGCTACAGAACTCTTGCCCCCATTTATCCTTGGAAGGCAAAGGGGGCAATGGGAAGAGCTCCATGTTGTGAGAAAGGCAAGGTGAAGAAAGGGCCTTGGTCTCCTGATGAGGACGCCATTCTCAAAAGTTATGTAGAAACTCATGGCATTGCTGGTACCTGGATTGCTCTGCCTACTAAAGCTGGGTTGAAGAGATGTGGGAAAAGTTGTAGGTTAAGATGGCTAAACTATCTCAGACCCAATATCAAGCATGGGGAATTTACAGAAGAGGAAGACAATGTCATTTTTAATCTCTACAATCAATATGGAAGCAGATGGTCTACCATAGCCTCTCAACTCCCAGGTAGAACAGACAATGATGTAAAAAACCATTGGAATACTAAACTGAAGAAGAAGAAGAAGAAGCTGTTCCTTGCAGCCAAAACCCAGAGTCATCTTCACTCACAATCCCCACTCCTACATACACAAGAAACAGACTTCACTGAAATTATTAACCACACACCAATCTCATGCATTGCTGCATTAGACAACTCAGTCGATCAGTTCCAGATTCCCACAGTTTCCGAACCGGGTGCCGGTAGTGACAGTAGAGATCAATGGAGTTCAATGGAACCATGGGGCTGTGATTTCCCAGCAGACATGATATGCAGCATGTTGTTTTAAGGAGAAAAAAAAAATAGTGAGTTGGAAAGATGGTTGTTTAGTAGGCTATTGATAATATATGAACACAATGCTACTACGTAATAACCGTTCCATTTGAATCCTAAAATTTGTATGCTTTTTGTATTAT

Coding sequence (CDS)

ATGGGAAGAGCTCCATGTTGTGAGAAAGGCAAGGTGAAGAAAGGGCCTTGGTCTCCTGATGAGGACGCCATTCTCAAAAGTTATGTAGAAACTCATGGCATTGCTGGTACCTGGATTGCTCTGCCTACTAAAGCTGGGTTGAAGAGATGTGGGAAAAGTTGTAGGTTAAGATGGCTAAACTATCTCAGACCCAATATCAAGCATGGGGAATTTACAGAAGAGGAAGACAATGTCATTTTTAATCTCTACAATCAATATGGAAGCAGATGGTCTACCATAGCCTCTCAACTCCCAGGTAGAACAGACAATGATGTAAAAAACCATTGGAATACTAAACTGAAGAAGAAGAAGAAGAAGCTGTTCCTTGCAGCCAAAACCCAGAGTCATCTTCACTCACAATCCCCACTCCTACATACACAAGAAACAGACTTCACTGAAATTATTAACCACACACCAATCTCATGCATTGCTGCATTAGACAACTCAGTCGATCAGTTCCAGATTCCCACAGTTTCCGAACCGGGTGCCGGTAGTGACAGTAGAGATCAATGGAGTTCAATGGAACCATGGGGCTGTGATTTCCCAGCAGACATGATATGCAGCATGTTGTTTTAA

Protein sequence

MGRAPCCEKGKVKKGPWSPDEDAILKSYVETHGIAGTWIALPTKAGLKRCGKSCRLRWLNYLRPNIKHGEFTEEEDNVIFNLYNQYGSRWSTIASQLPGRTDNDVKNHWNTKLKKKKKKLFLAAKTQSHLHSQSPLLHTQETDFTEIINHTPISCIAALDNSVDQFQIPTVSEPGAGSDSRDQWSSMEPWGCDFPADMICSMLF*

Homology

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BLAST of CSPI02G18210 vs. ExPASy Swiss-Prot
Match: Q9M2Y9 (Transcription factor RAX3 OS=Arabidopsis thaliana OX=3702 GN=RAX3 PE=2 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 5.1e-52
Identity = 103/183 (56.28%), Postives = 124/183 (67.76%), Query Frame = 0


Query: 1   MGRAPCCEKGKVKKGPWSPDEDAILKSYVETHGIAGTWIALPTKAGLKRCGKSCRLRWLN 60
           MGRAPCC+K  VKKGPWSP+EDA LKSY+E  G  G WIALP K GLKRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKKGPWSPEEDAKLKSYIENSGTGGNWIALPQKIGLKRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGEFTEEEDNVIFNLYNQYGSRWSTIASQLPGRTDNDVKNHWNTKLKKK---- 120
           YLRPNIKHG F+EEE+N+I +LY   GSRWS IA+QLPGRTDND+KN+WNT+LKKK    
Sbjct: 61  YLRPNIKHGGFSEEEENIICSLYLTIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLINK 120

Query: 121 -KKKLFLAAKTQSHL-------HSQ-----SPLLHTQETDFTEIINHTPISCIAALDNSV 167
            +K+L  A   Q  +       H Q     S ++   +T FT  ++H  +   A   N  
Sbjct: 121 QRKELQEACMEQQEMMVMMKRQHQQQQIQTSFMMRQDQTMFTWPLHHHNVQVPALFMNQT 180

[Close]

BLAST of CSPI02G18210 vs. ExPASy Swiss-Prot
Match: Q9SJL7 (Transcription factor RAX2 OS=Arabidopsis thaliana OX=3702 GN=RAX2 PE=1 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 3.3e-51
Identity = 86/116 (74.14%), Postives = 100/116 (86.21%), Query Frame = 0


Query: 1   MGRAPCCEKGKVKKGPWSPDEDAILKSYVETHGIAGTWIALPTKAGLKRCGKSCRLRWLN 60
           MGRAPCC+K  VK+GPWSP+EDA LK Y+E  G  G WIALP KAGL+RCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKRGPWSPEEDAKLKDYIEKQGTGGNWIALPHKAGLRRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGEFTEEEDNVIFNLYNQYGSRWSTIASQLPGRTDNDVKNHWNTKLKKK 117
           YLRPNI+HG+FTEEEDN+I++L+   GSRWS IA+ L GRTDND+KN+WNTKLKKK
Sbjct: 61  YLRPNIRHGDFTEEEDNIIYSLFASIGSRWSVIAAHLQGRTDNDIKNYWNTKLKKK 116

[Close]

BLAST of CSPI02G18210 vs. ExPASy Swiss-Prot
Match: Q9FKL2 (Transcription factor MYB36 OS=Arabidopsis thaliana OX=3702 GN=MYB36 PE=1 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 5.6e-51
Identity = 87/116 (75.00%), Postives = 98/116 (84.48%), Query Frame = 0


Query: 1   MGRAPCCEKGKVKKGPWSPDEDAILKSYVETHGIAGTWIALPTKAGLKRCGKSCRLRWLN 60
           MGRAPCC+K  VKKGPWSP+ED  LK Y++ +G  G WIALP K GLKRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKKGPWSPEEDVKLKDYIDKYGTGGNWIALPQKIGLKRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGEFTEEEDNVIFNLYNQYGSRWSTIASQLPGRTDNDVKNHWNTKLKKK 117
           YLRPNIKHG F+EEED +I +LY   GSRWS IA+QLPGRTDND+KN+WNTKLKKK
Sbjct: 61  YLRPNIKHGGFSEEEDRIILSLYISIGSRWSIIAAQLPGRTDNDIKNYWNTKLKKK 116

[Close]

BLAST of CSPI02G18210 vs. ExPASy Swiss-Prot
Match: Q9FG68 (Transcription factor RAX1 OS=Arabidopsis thaliana OX=3702 GN=RAX1 PE=1 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 1.6e-50
Identity = 95/172 (55.23%), Postives = 120/172 (69.77%), Query Frame = 0


Query: 1   MGRAPCCEKGKVKKGPWSPDEDAILKSYVETHGIAGTWIALPTKAGLKRCGKSCRLRWLN 60
           MGRAPCC+K KVK+GPWSP+ED+ L+ Y+E +G  G WI+ P KAGL+RCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKTKVKRGPWSPEEDSKLRDYIEKYGNGGNWISFPLKAGLRRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGEFTEEEDNVIFNLYNQYGSRWSTIASQLPGRTDNDVKNHWNTKLKKKKKKL 120
           YLRPNIKHG+F+EEED +IF+L+   GSRWS IA+ LPGRTDND+KN+WNTKL   +KKL
Sbjct: 61  YLRPNIKHGDFSEEEDRIIFSLFAAIGSRWSIIAAHLPGRTDNDIKNYWNTKL---RKKL 120

Query: 121 FLAAKTQSHLHSQSPLLHTQETDFTEIINHTPISCIAALDNSVDQFQIPTVS 173
             ++   S     SP L+    D     + T I   +    + +  Q PT S
Sbjct: 121 LSSSSDSSSSAMASPYLNPISQDVKRPTSPTTIPSSSYNPYAENPNQYPTKS 169

[Close]

BLAST of CSPI02G18210 vs. ExPASy Swiss-Prot
Match: F4JSU0 (Transcription factor MYB87 OS=Arabidopsis thaliana OX=3702 GN=MYB87 PE=2 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 6.2e-50
Identity = 89/133 (66.92%), Postives = 104/133 (78.20%), Query Frame = 0


Query: 1   MGRAPCCEKGKVKKGPWSPDEDAILKSYVETHGIAGTWIALPTKAGLKRCGKSCRLRWLN 60
           MGRAPCC+K  VKKGPWS +EDA+LKSY+E HG    WI+LP + G+KRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKMAVKKGPWSTEEDAVLKSYIEKHGTGNNWISLPQRIGIKRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGEFTEEEDNVIFNLYNQYGSRWSTIASQLPGRTDNDVKNHWNTKLKKKKKKL 120
           YLRPN+KHG FT+EED +I +LY   GSRWS IASQLPGRTDND+KN+WNT+LKKK    
Sbjct: 61  YLRPNLKHGGFTDEEDYIICSLYITIGSRWSIIASQLPGRTDNDIKNYWNTRLKKK---- 120

Query: 121 FLAAKTQSHLHSQ 134
            L +K     H Q
Sbjct: 121 -LLSKQGKAFHQQ 128

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BLAST of CSPI02G18210 vs. ExPASy TrEMBL
Match: A0A0A0LR01 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G352410 PE=4 SV=1)

HSP 1 Score: 435.3 bits (1118), Expect = 1.5e-118
Identity = 203/204 (99.51%), Postives = 204/204 (100.00%), Query Frame = 0


Query: 1   MGRAPCCEKGKVKKGPWSPDEDAILKSYVETHGIAGTWIALPTKAGLKRCGKSCRLRWLN 60
           MGRAPCCEKGKVKKGPWSPDEDAILKSYVETHGIAGTWIALPTKAGLKRCGKSCRLRWLN
Sbjct: 1   MGRAPCCEKGKVKKGPWSPDEDAILKSYVETHGIAGTWIALPTKAGLKRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGEFTEEEDNVIFNLYNQYGSRWSTIASQLPGRTDNDVKNHWNTKLKKKKKKL 120
           YLRPNIKHGEFTEEEDNVIFNL+NQYGSRWSTIASQLPGRTDNDVKNHWNTKLKKKKKKL
Sbjct: 61  YLRPNIKHGEFTEEEDNVIFNLFNQYGSRWSTIASQLPGRTDNDVKNHWNTKLKKKKKKL 120

Query: 121 FLAAKTQSHLHSQSPLLHTQETDFTEIINHTPISCIAALDNSVDQFQIPTVSEPGAGSDS 180
           FLAAKTQSHLHSQSPLLHTQETDFTEIINHTPISCIAALDNSVDQFQIPTVSEPGAGSDS
Sbjct: 121 FLAAKTQSHLHSQSPLLHTQETDFTEIINHTPISCIAALDNSVDQFQIPTVSEPGAGSDS 180

Query: 181 RDQWSSMEPWGCDFPADMICSMLF 205
           RDQWSSMEPWGCDFPADMICSMLF
Sbjct: 181 RDQWSSMEPWGCDFPADMICSMLF 204

[Close]

BLAST of CSPI02G18210 vs. ExPASy TrEMBL
Match: A0A1S3BB79 (transcription factor RAX3-like OS=Cucumis melo OX=3656 GN=LOC103487802 PE=4 SV=1)

HSP 1 Score: 407.5 bits (1046), Expect = 3.2e-110
Identity = 191/204 (93.63%), Postives = 195/204 (95.59%), Query Frame = 0


Query: 1   MGRAPCCEKGKVKKGPWSPDEDAILKSYVETHGIAGTWIALPTKAGLKRCGKSCRLRWLN 60
           MGRAPCCEKGKVKKGPWSPDEDAILKSYVETHGIAGTWIALPTKAGLKRCGKSCRLRWLN
Sbjct: 1   MGRAPCCEKGKVKKGPWSPDEDAILKSYVETHGIAGTWIALPTKAGLKRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGEFTEEEDNVIFNLYNQYGSRWSTIASQLPGRTDNDVKNHWNTKLKKKKKKL 120
           YLRPNIKHGEFTEEEDNVIFNLYNQYGSRWSTIASQLPGRTDNDVKNHWNTKL KKKKKL
Sbjct: 61  YLRPNIKHGEFTEEEDNVIFNLYNQYGSRWSTIASQLPGRTDNDVKNHWNTKL-KKKKKL 120

Query: 121 FLAAKTQSHLHSQSPLLHTQETDFTEIINHTPISCIAALDNSVDQFQIPTVSEPGAGSDS 180
           FLAAKT+SHLHSQSPLLH  +T+FTEIINHTPISCIAAL NSVDQFQIPTVSEP  GSDS
Sbjct: 121 FLAAKTKSHLHSQSPLLHAPQTEFTEIINHTPISCIAALHNSVDQFQIPTVSEPDPGSDS 180

Query: 181 RDQWSSMEPWGCDFPADMICSMLF 205
           RD W S EPWGCDFPAD+ICSMLF
Sbjct: 181 RDHWGSTEPWGCDFPADIICSMLF 203

[Close]

BLAST of CSPI02G18210 vs. ExPASy TrEMBL
Match: A0A5A7UYK8 (Clathrin interactor EPSIN 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G001170 PE=4 SV=1)

HSP 1 Score: 370.2 bits (949), Expect = 5.7e-99
Identity = 179/205 (87.32%), Postives = 184/205 (89.76%), Query Frame = 0


Query: 1   MGRAPCCEKGKVKKGPWSPDEDAILKSYVETHGIAGTWIALPTKAGLKRCGKSCRLRWLN 60
           MGRAPCCEKGKVKKGPWSPDEDAILKSYVETHGI          AGLKRCGKSCRLRWLN
Sbjct: 1   MGRAPCCEKGKVKKGPWSPDEDAILKSYVETHGI----------AGLKRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGEFTEEEDNVIFNLYNQYGS---RWSTIASQLPGRTDNDVKNHWNTKLKKKK 120
           YLRPNIKHGEFTEEEDNVIFNLYNQYGS   RWSTIASQLPGRTDNDVKNHWNTKL KKK
Sbjct: 61  YLRPNIKHGEFTEEEDNVIFNLYNQYGSRQVRWSTIASQLPGRTDNDVKNHWNTKL-KKK 120

Query: 121 KKLFLAAKTQSHLHSQSPLLHTQETDFTEIINHTPISCIAALDNSVDQFQIPTVSEPGAG 180
           KKLFLAAKT+SHLHSQSPLLH  +T+FTEIINHTPISCIAAL NSVDQFQIPT+SEP  G
Sbjct: 121 KKLFLAAKTKSHLHSQSPLLHAPQTEFTEIINHTPISCIAALHNSVDQFQIPTISEPDPG 180

Query: 181 SDSRDQWSSMEPWGCDFPADMICSM 203
           SDSRDQW S EPWGCDFPAD+ICSM
Sbjct: 181 SDSRDQWGSTEPWGCDFPADIICSM 194

[Close]

BLAST of CSPI02G18210 vs. ExPASy TrEMBL
Match: A0A6J1GH52 (transcription factor MYB36-like OS=Cucurbita moschata OX=3662 GN=LOC111454127 PE=4 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 1.5e-75
Identity = 145/211 (68.72%), Postives = 157/211 (74.41%), Query Frame = 0


Query: 1   MGRAPCCEKGKVKKGPWSPDEDAILKSYVETHGIAGTWIALPTKAGLKRCGKSCRLRWLN 60
           MGRAPCC+K  VKKGPWSPDEDA LK YVETHG AGTWIALPTKAGLKRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKKGPWSPDEDATLKLYVETHGTAGTWIALPTKAGLKRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGEFTEEEDNVIFNLYNQYGSRWSTIASQLPGRTDNDVKNHWNTKLKKKKKKL 120
           YLRPNIKHG+FTE+EDN+IFNLYNQYGSRWS+IASQLPGRTDNDVKNHWNTKLKKKKK L
Sbjct: 61  YLRPNIKHGDFTEDEDNLIFNLYNQYGSRWSSIASQLPGRTDNDVKNHWNTKLKKKKKLL 120

Query: 121 FLAAKTQSHLHSQSPLLHTQETDFTEIINHTPISCIAALDNSVDQFQIPTVSE------- 180
             A KT+    S +      ET   + I+++     A  D SV QFQ P VS        
Sbjct: 121 VAAGKTKLQTMSST------ETSLPQTISNS-----AGFD-SVAQFQTPNVSPSSFSDMV 180

Query: 181 PGAGSDSRDQWSSMEPWGCDFPADMICSMLF 205
           PG     RD+W  ME WGCDF  DMICSM F
Sbjct: 181 PGGSGYGRDEWGLMEDWGCDFSPDMICSMFF 199

[Close]

BLAST of CSPI02G18210 vs. ExPASy TrEMBL
Match: A0A6J1KQU4 (transcription factor MYB36-like OS=Cucurbita maxima OX=3661 GN=LOC111496394 PE=4 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 8.3e-74
Identity = 142/211 (67.30%), Postives = 157/211 (74.41%), Query Frame = 0


Query: 1   MGRAPCCEKGKVKKGPWSPDEDAILKSYVETHGIAGTWIALPTKAGLKRCGKSCRLRWLN 60
           MGRAPCC+K  VKKGPWSPDEDA LK YVETHG AGTWIALPTKAGLKRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKKGPWSPDEDATLKLYVETHGTAGTWIALPTKAGLKRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGEFTEEEDNVIFNLYNQYGSRWSTIASQLPGRTDNDVKNHWNTKLKKKKKKL 120
           YLRPNIKHG+FTE+EDN+IFNLYNQ+GSRWS+IASQLPGRTDNDVKNHWNTKLKKKKK L
Sbjct: 61  YLRPNIKHGDFTEDEDNLIFNLYNQHGSRWSSIASQLPGRTDNDVKNHWNTKLKKKKKLL 120

Query: 121 FLAAKTQSHLHSQSPLLHTQETDFTEIINHTPISCIAALDNSVDQFQIPTVSE------- 180
             A KT+    S +      ET   + I+++     A  D SV QFQIP VS        
Sbjct: 121 VAAGKTKLQTMSST------ETSLPQTISNS-----AGFD-SVAQFQIPNVSPSSFSDMV 180

Query: 181 PGAGSDSRDQWSSMEPWGCDFPADMICSMLF 205
           PG     RD+W  ME WGC F  DM+C+M F
Sbjct: 181 PGGRGYGRDEWGLMEDWGCYFSPDMVCTMFF 199

[Close]

BLAST of CSPI02G18210 vs. NCBI nr
Match: XP_004142913.1 (transcription factor RAX3 [Cucumis sativus] >KGN62411.1 hypothetical protein Csa_018702 [Cucumis sativus])

HSP 1 Score: 435.3 bits (1118), Expect = 3.0e-118
Identity = 203/204 (99.51%), Postives = 204/204 (100.00%), Query Frame = 0


Query: 1   MGRAPCCEKGKVKKGPWSPDEDAILKSYVETHGIAGTWIALPTKAGLKRCGKSCRLRWLN 60
           MGRAPCCEKGKVKKGPWSPDEDAILKSYVETHGIAGTWIALPTKAGLKRCGKSCRLRWLN
Sbjct: 1   MGRAPCCEKGKVKKGPWSPDEDAILKSYVETHGIAGTWIALPTKAGLKRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGEFTEEEDNVIFNLYNQYGSRWSTIASQLPGRTDNDVKNHWNTKLKKKKKKL 120
           YLRPNIKHGEFTEEEDNVIFNL+NQYGSRWSTIASQLPGRTDNDVKNHWNTKLKKKKKKL
Sbjct: 61  YLRPNIKHGEFTEEEDNVIFNLFNQYGSRWSTIASQLPGRTDNDVKNHWNTKLKKKKKKL 120

Query: 121 FLAAKTQSHLHSQSPLLHTQETDFTEIINHTPISCIAALDNSVDQFQIPTVSEPGAGSDS 180
           FLAAKTQSHLHSQSPLLHTQETDFTEIINHTPISCIAALDNSVDQFQIPTVSEPGAGSDS
Sbjct: 121 FLAAKTQSHLHSQSPLLHTQETDFTEIINHTPISCIAALDNSVDQFQIPTVSEPGAGSDS 180

Query: 181 RDQWSSMEPWGCDFPADMICSMLF 205
           RDQWSSMEPWGCDFPADMICSMLF
Sbjct: 181 RDQWSSMEPWGCDFPADMICSMLF 204

[Close]

BLAST of CSPI02G18210 vs. NCBI nr
Match: XP_008444504.1 (PREDICTED: transcription factor RAX3-like [Cucumis melo])

HSP 1 Score: 407.5 bits (1046), Expect = 6.7e-110
Identity = 191/204 (93.63%), Postives = 195/204 (95.59%), Query Frame = 0


Query: 1   MGRAPCCEKGKVKKGPWSPDEDAILKSYVETHGIAGTWIALPTKAGLKRCGKSCRLRWLN 60
           MGRAPCCEKGKVKKGPWSPDEDAILKSYVETHGIAGTWIALPTKAGLKRCGKSCRLRWLN
Sbjct: 1   MGRAPCCEKGKVKKGPWSPDEDAILKSYVETHGIAGTWIALPTKAGLKRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGEFTEEEDNVIFNLYNQYGSRWSTIASQLPGRTDNDVKNHWNTKLKKKKKKL 120
           YLRPNIKHGEFTEEEDNVIFNLYNQYGSRWSTIASQLPGRTDNDVKNHWNTKL KKKKKL
Sbjct: 61  YLRPNIKHGEFTEEEDNVIFNLYNQYGSRWSTIASQLPGRTDNDVKNHWNTKL-KKKKKL 120

Query: 121 FLAAKTQSHLHSQSPLLHTQETDFTEIINHTPISCIAALDNSVDQFQIPTVSEPGAGSDS 180
           FLAAKT+SHLHSQSPLLH  +T+FTEIINHTPISCIAAL NSVDQFQIPTVSEP  GSDS
Sbjct: 121 FLAAKTKSHLHSQSPLLHAPQTEFTEIINHTPISCIAALHNSVDQFQIPTVSEPDPGSDS 180

Query: 181 RDQWSSMEPWGCDFPADMICSMLF 205
           RD W S EPWGCDFPAD+ICSMLF
Sbjct: 181 RDHWGSTEPWGCDFPADIICSMLF 203

[Close]

BLAST of CSPI02G18210 vs. NCBI nr
Match: KAA0060982.1 (clathrin interactor EPSIN 1 [Cucumis melo var. makuwa])

HSP 1 Score: 370.2 bits (949), Expect = 1.2e-98
Identity = 179/205 (87.32%), Postives = 184/205 (89.76%), Query Frame = 0


Query: 1   MGRAPCCEKGKVKKGPWSPDEDAILKSYVETHGIAGTWIALPTKAGLKRCGKSCRLRWLN 60
           MGRAPCCEKGKVKKGPWSPDEDAILKSYVETHGI          AGLKRCGKSCRLRWLN
Sbjct: 1   MGRAPCCEKGKVKKGPWSPDEDAILKSYVETHGI----------AGLKRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGEFTEEEDNVIFNLYNQYGS---RWSTIASQLPGRTDNDVKNHWNTKLKKKK 120
           YLRPNIKHGEFTEEEDNVIFNLYNQYGS   RWSTIASQLPGRTDNDVKNHWNTKL KKK
Sbjct: 61  YLRPNIKHGEFTEEEDNVIFNLYNQYGSRQVRWSTIASQLPGRTDNDVKNHWNTKL-KKK 120

Query: 121 KKLFLAAKTQSHLHSQSPLLHTQETDFTEIINHTPISCIAALDNSVDQFQIPTVSEPGAG 180
           KKLFLAAKT+SHLHSQSPLLH  +T+FTEIINHTPISCIAAL NSVDQFQIPT+SEP  G
Sbjct: 121 KKLFLAAKTKSHLHSQSPLLHAPQTEFTEIINHTPISCIAALHNSVDQFQIPTISEPDPG 180

Query: 181 SDSRDQWSSMEPWGCDFPADMICSM 203
           SDSRDQW S EPWGCDFPAD+ICSM
Sbjct: 181 SDSRDQWGSTEPWGCDFPADIICSM 194

[Close]

BLAST of CSPI02G18210 vs. NCBI nr
Match: XP_038886382.1 (transcription factor MYB36-like isoform X1 [Benincasa hispida])

HSP 1 Score: 344.0 bits (881), Expect = 9.1e-91
Identity = 171/213 (80.28%), Postives = 179/213 (84.04%), Query Frame = 0


Query: 1   MGRAPCCEKGKVKKGPWSPDEDAILKSYVETHGIAGTWIALPTKAGLKRCGKSCRLRWLN 60
           MGRAPCCEKGKVKKGPWSPDED ILK YVETHG+AGTWIALPTKAGLKRCGKSCRLRWLN
Sbjct: 1   MGRAPCCEKGKVKKGPWSPDEDTILKRYVETHGVAGTWIALPTKAGLKRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGEFTEEEDNVIFNLYNQYGSRWSTIASQLPGRTDNDVKNHWNTKLKKKKKKL 120
           YLRPNIKHGEFTEEEDNVIFNLYNQYGSRWSTIASQLPGRTDNDVKNHWNTKL  KKKKL
Sbjct: 61  YLRPNIKHGEFTEEEDNVIFNLYNQYGSRWSTIASQLPGRTDNDVKNHWNTKL--KKKKL 120

Query: 121 FLAAKTQ----SHLHSQSPLLHTQETDFTEIINHTPISCIAALDNSVDQFQIPTV----- 180
           FLA +T+    +HLHS+S LLH  ETDFTEIINH PIS  A LD+SVDQF+IP V     
Sbjct: 121 FLAGQTKLQTHTHLHSKSSLLHVLETDFTEIINHPPIS-FAGLDDSVDQFEIPPVIGSSL 180

Query: 181 SEPGAGSDSRDQWSSMEPWGCDFPADMICSMLF 205
            EPG   D RD+W  ME  G DFP DMI SMLF
Sbjct: 181 FEPGVTVDGRDKWGLMEHGGYDFPPDMIFSMLF 210

[Close]

BLAST of CSPI02G18210 vs. NCBI nr
Match: XP_038886383.1 (transcription factor MYB87-like isoform X2 [Benincasa hispida])

HSP 1 Score: 314.3 bits (804), Expect = 7.7e-82
Identity = 161/213 (75.59%), Postives = 169/213 (79.34%), Query Frame = 0


Query: 1   MGRAPCCEKGKVKKGPWSPDEDAILKSYVETHGIAGTWIALPTKAGLKRCGKSCRLRWLN 60
           MGRAPCCEKGKVKKGPWSPDED ILK YVETHG+          AGLKRCGKSCRLRWLN
Sbjct: 1   MGRAPCCEKGKVKKGPWSPDEDTILKRYVETHGV----------AGLKRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGEFTEEEDNVIFNLYNQYGSRWSTIASQLPGRTDNDVKNHWNTKLKKKKKKL 120
           YLRPNIKHGEFTEEEDNVIFNLYNQYGSRWSTIASQLPGRTDNDVKNHWNTKL  KKKKL
Sbjct: 61  YLRPNIKHGEFTEEEDNVIFNLYNQYGSRWSTIASQLPGRTDNDVKNHWNTKL--KKKKL 120

Query: 121 FLAAKTQ----SHLHSQSPLLHTQETDFTEIINHTPISCIAALDNSVDQFQIPTV----- 180
           FLA +T+    +HLHS+S LLH  ETDFTEIINH PIS  A LD+SVDQF+IP V     
Sbjct: 121 FLAGQTKLQTHTHLHSKSSLLHVLETDFTEIINHPPIS-FAGLDDSVDQFEIPPVIGSSL 180

Query: 181 SEPGAGSDSRDQWSSMEPWGCDFPADMICSMLF 205
            EPG   D RD+W  ME  G DFP DMI SMLF
Sbjct: 181 FEPGVTVDGRDKWGLMEHGGYDFPPDMIFSMLF 200

[Close]

BLAST of CSPI02G18210 vs. TAIR 10
Match: AT3G49690.1 (myb domain protein 84 )

HSP 1 Score: 205.7 bits (522), Expect = 3.6e-53
Identity = 103/183 (56.28%), Postives = 124/183 (67.76%), Query Frame = 0


Query: 1   MGRAPCCEKGKVKKGPWSPDEDAILKSYVETHGIAGTWIALPTKAGLKRCGKSCRLRWLN 60
           MGRAPCC+K  VKKGPWSP+EDA LKSY+E  G  G WIALP K GLKRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKKGPWSPEEDAKLKSYIENSGTGGNWIALPQKIGLKRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGEFTEEEDNVIFNLYNQYGSRWSTIASQLPGRTDNDVKNHWNTKLKKK---- 120
           YLRPNIKHG F+EEE+N+I +LY   GSRWS IA+QLPGRTDND+KN+WNT+LKKK    
Sbjct: 61  YLRPNIKHGGFSEEEENIICSLYLTIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLINK 120

Query: 121 -KKKLFLAAKTQSHL-------HSQ-----SPLLHTQETDFTEIINHTPISCIAALDNSV 167
            +K+L  A   Q  +       H Q     S ++   +T FT  ++H  +   A   N  
Sbjct: 121 QRKELQEACMEQQEMMVMMKRQHQQQQIQTSFMMRQDQTMFTWPLHHHNVQVPALFMNQT 180

[Close]

BLAST of CSPI02G18210 vs. TAIR 10
Match: AT5G65790.1 (myb domain protein 68 )

HSP 1 Score: 204.1 bits (518), Expect = 1.0e-52
Identity = 92/134 (68.66%), Postives = 107/134 (79.85%), Query Frame = 0


Query: 1   MGRAPCCEKGKVKKGPWSPDEDAILKSYVETHGIAGTWIALPTKAGLKRCGKSCRLRWLN 60
           MGRAPCC+K  VKKGPWSP+EDA LK Y+E  G  G WIALP K GL+RCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKKGPWSPEEDAKLKDYIENSGTGGNWIALPQKIGLRRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGEFTEEEDNVIFNLYNQYGSRWSTIASQLPGRTDNDVKNHWNTKLKK----K 120
           YLRPNIKHG F+EEEDN+I NLY   GSRWS IA+QLPGRTDND+KN+WNT+LKK    K
Sbjct: 61  YLRPNIKHGGFSEEEDNIICNLYVTIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLLNK 120

Query: 121 KKKLFLAAKTQSHL 131
           ++K F  A+ +  +
Sbjct: 121 QRKEFQEARMKQEM 134

[Close]

BLAST of CSPI02G18210 vs. TAIR 10
Match: AT2G36890.1 (Duplicated homeodomain-like superfamily protein )

HSP 1 Score: 203.0 bits (515), Expect = 2.3e-52
Identity = 86/116 (74.14%), Postives = 100/116 (86.21%), Query Frame = 0


Query: 1   MGRAPCCEKGKVKKGPWSPDEDAILKSYVETHGIAGTWIALPTKAGLKRCGKSCRLRWLN 60
           MGRAPCC+K  VK+GPWSP+EDA LK Y+E  G  G WIALP KAGL+RCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKRGPWSPEEDAKLKDYIEKQGTGGNWIALPHKAGLRRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGEFTEEEDNVIFNLYNQYGSRWSTIASQLPGRTDNDVKNHWNTKLKKK 117
           YLRPNI+HG+FTEEEDN+I++L+   GSRWS IA+ L GRTDND+KN+WNTKLKKK
Sbjct: 61  YLRPNIRHGDFTEEEDNIIYSLFASIGSRWSVIAAHLQGRTDNDIKNYWNTKLKKK 116

[Close]

BLAST of CSPI02G18210 vs. TAIR 10
Match: AT5G57620.1 (myb domain protein 36 )

HSP 1 Score: 202.2 bits (513), Expect = 4.0e-52
Identity = 87/116 (75.00%), Postives = 98/116 (84.48%), Query Frame = 0


Query: 1   MGRAPCCEKGKVKKGPWSPDEDAILKSYVETHGIAGTWIALPTKAGLKRCGKSCRLRWLN 60
           MGRAPCC+K  VKKGPWSP+ED  LK Y++ +G  G WIALP K GLKRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKKGPWSPEEDVKLKDYIDKYGTGGNWIALPQKIGLKRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGEFTEEEDNVIFNLYNQYGSRWSTIASQLPGRTDNDVKNHWNTKLKKK 117
           YLRPNIKHG F+EEED +I +LY   GSRWS IA+QLPGRTDND+KN+WNTKLKKK
Sbjct: 61  YLRPNIKHGGFSEEEDRIILSLYISIGSRWSIIAAQLPGRTDNDIKNYWNTKLKKK 116

[Close]

BLAST of CSPI02G18210 vs. TAIR 10
Match: AT5G23000.1 (myb domain protein 37 )

HSP 1 Score: 200.7 bits (509), Expect = 1.2e-51
Identity = 95/172 (55.23%), Postives = 120/172 (69.77%), Query Frame = 0


Query: 1   MGRAPCCEKGKVKKGPWSPDEDAILKSYVETHGIAGTWIALPTKAGLKRCGKSCRLRWLN 60
           MGRAPCC+K KVK+GPWSP+ED+ L+ Y+E +G  G WI+ P KAGL+RCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKTKVKRGPWSPEEDSKLRDYIEKYGNGGNWISFPLKAGLRRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGEFTEEEDNVIFNLYNQYGSRWSTIASQLPGRTDNDVKNHWNTKLKKKKKKL 120
           YLRPNIKHG+F+EEED +IF+L+   GSRWS IA+ LPGRTDND+KN+WNTKL   +KKL
Sbjct: 61  YLRPNIKHGDFSEEEDRIIFSLFAAIGSRWSIIAAHLPGRTDNDIKNYWNTKL---RKKL 120

Query: 121 FLAAKTQSHLHSQSPLLHTQETDFTEIINHTPISCIAALDNSVDQFQIPTVS 173
             ++   S     SP L+    D     + T I   +    + +  Q PT S
Sbjct: 121 LSSSSDSSSSAMASPYLNPISQDVKRPTSPTTIPSSSYNPYAENPNQYPTKS 169

The following BLAST results are available for this feature:

BLAST of CSPI02G18210 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M2Y9	5.1e-52	56.28	Transcription factor RAX3 OS=Arabidopsis thaliana OX=3702 GN=RAX3 PE=2 SV=1	[more]
Q9SJL7	3.3e-51	74.14	Transcription factor RAX2 OS=Arabidopsis thaliana OX=3702 GN=RAX2 PE=1 SV=1	[more]
Q9FKL2	5.6e-51	75.00	Transcription factor MYB36 OS=Arabidopsis thaliana OX=3702 GN=MYB36 PE=1 SV=1	[more]
Q9FG68	1.6e-50	55.23	Transcription factor RAX1 OS=Arabidopsis thaliana OX=3702 GN=RAX1 PE=1 SV=1	[more]
F4JSU0	6.2e-50	66.92	Transcription factor MYB87 OS=Arabidopsis thaliana OX=3702 GN=MYB87 PE=2 SV=1	[more]

BLAST of CSPI02G18210 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LR01	1.5e-118	99.51	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G352410 PE=4 SV=1	[more]
A0A1S3BB79	3.2e-110	93.63	transcription factor RAX3-like OS=Cucumis melo OX=3656 GN=LOC103487802 PE=4 SV=1	[more]
A0A5A7UYK8	5.7e-99	87.32	Clathrin interactor EPSIN 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf...	[more]
A0A6J1GH52	1.5e-75	68.72	transcription factor MYB36-like OS=Cucurbita moschata OX=3662 GN=LOC111454127 PE...	[more]
A0A6J1KQU4	8.3e-74	67.30	transcription factor MYB36-like OS=Cucurbita maxima OX=3661 GN=LOC111496394 PE=4...	[more]

BLAST of CSPI02G18210 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004142913.1	3.0e-118	99.51	transcription factor RAX3 [Cucumis sativus] >KGN62411.1 hypothetical protein Csa...	[more]
XP_008444504.1	6.7e-110	93.63	PREDICTED: transcription factor RAX3-like [Cucumis melo]	[more]
KAA0060982.1	1.2e-98	87.32	clathrin interactor EPSIN 1 [Cucumis melo var. makuwa]	[more]
XP_038886382.1	9.1e-91	80.28	transcription factor MYB36-like isoform X1 [Benincasa hispida]	[more]
XP_038886383.1	7.7e-82	75.59	transcription factor MYB87-like isoform X2 [Benincasa hispida]	[more]

BLAST of CSPI02G18210 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G49690.1	3.6e-53	56.28	myb domain protein 84	[more]
AT5G65790.1	1.0e-52	68.66	myb domain protein 68	[more]
AT2G36890.1	2.3e-52	74.14	Duplicated homeodomain-like superfamily protein	[more]
AT5G57620.1	4.0e-52	75.00	myb domain protein 36	[more]
AT5G23000.1	1.2e-51	55.23	myb domain protein 37	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 13..64 e-value: 6.4E-9 score: 45.6 coord: 67..115 e-value: 1.3E-15 score: 67.8
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 63..113 score: 10.696428
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 9..62 score: 10.359669
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 70..111 e-value: 3.31269E-12 score: 56.815
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 16..62 e-value: 4.18077E-7 score: 43.333
None	No IPR available	GENE3D	1.10.10.60		coord: 7..68 e-value: 3.4E-17 score: 64.0
None	No IPR available	GENE3D	1.10.10.60		coord: 69..141 e-value: 7.0E-22 score: 79.3
None	No IPR available	PANTHER	PTHR48000:SF36	OS09G0431300 PROTEIN	coord: 1..143
None	No IPR available	PANTHER	PTHR48000	OS09G0431300 PROTEIN	coord: 1..143
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 69..111 e-value: 9.9E-14 score: 51.3 coord: 14..62 e-value: 3.1E-12 score: 46.5
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 63..117 score: 24.907761
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 9..62 score: 14.17283
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 12..109

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI02G18210.1	CSPI02G18210.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006623	protein targeting to vacuole
cellular_component	GO:0030136	clathrin-coated vesicle
cellular_component	GO:0005794	Golgi apparatus
molecular_function	GO:0030276	clathrin binding