CSPI02G18150 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI02G18150
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr2: 16865360 .. 16865738 (-)
RNA-Seq ExpressionCSPI02G18150
SyntenyCSPI02G18150
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTGTACAGCAAGCAATTGGATCTTCTCATTCTTTCATCTTCTACACTCTATAAATAATTTCACGTTATTCATAATCAATTTCCACAGAAACATCAACATAGTGTACTATCTCATTCTCCAGTAGGACAAAAGTTGTTGGGGCATCTATTGAAATGAGTCTCTTCTCTCTAATTTTCCGTTTGTTCCCTTCTTGCCTCTGCTCATCCCCAGTCTCAGATGTCGGGAAGGAGATTCCGGTGAAGAAATTGGCAGCGCCCGCGGAGACTAAGGAAGCTCCGATTGAAGTGGGCAATTCTCATGTTAATTCCTATCACTCTCACTTGTACTGGCGATGACGATGCCCATTCCATCAATTGTACGAGCTAGGGAGGATTGCTT

mRNA sequence

CTTGTACAGCAAGCAATTGGATCTTCTCATTCTTTCATCTTCTACACTCTATAAATAATTTCACGTTATTCATAATCAATTTCCACAGAAACATCAACATAGTGTACTATCTCATTCTCCAGTAGGACAAAAGTTGTTGGGGCATCTATTGAAATGAGTCTCTTCTCTCTAATTTTCCGTTTGTTCCCTTCTTGCCTCTGCTCATCCCCAGTCTCAGATGTCGGGAAGGAGATTCCGGTGAAGAAATTGGCAGCGCCCGCGGAGACTAAGGAAGCTCCGATTGAAGTGGGCAATTCTCATGTTAATTCCTATCACTCTCACTTGTACTGGCGATGACGATGCCCATTCCATCAATTGTACGAGCTAGGGAGGATTGCTT

Coding sequence (CDS)

ATGAGTCTCTTCTCTCTAATTTTCCGTTTGTTCCCTTCTTGCCTCTGCTCATCCCCAGTCTCAGATGTCGGGAAGGAGATTCCGGTGAAGAAATTGGCAGCGCCCGCGGAGACTAAGGAAGCTCCGATTGAAGTGGGCAATTCTCATGTTAATTCCTATCACTCTCACTTGTACTGGCGATGA

Protein sequence

MSLFSLIFRLFPSCLCSSPVSDVGKEIPVKKLAAPAETKEAPIEVGNSHVNSYHSHLYWR*
Homology
[Close]
BLAST of CSPI02G18150 vs. ExPASy TrEMBL
Match: A0A0A0LKG4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G351860 PE=4 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 8.1e-25
Identity = 59/60 (98.33%), Postives = 59/60 (98.33%), Query Frame = 0 

Query: 1  MSLFSLIFRLFPSCLCSSPVSDVGKEIPVKKLAAPAETKEAPIEVGNSHVNSYHSHLYWR 60
          MSLFSLIFRLFPSCL SSPVSDVGKEIPVKKLAAPAETKEAPIEVGNSHVNSYHSHLYWR
Sbjct: 1  MSLFSLIFRLFPSCLSSSPVSDVGKEIPVKKLAAPAETKEAPIEVGNSHVNSYHSHLYWR 60

[Close]
BLAST of CSPI02G18150 vs. NCBI nr
Match: KGN62405.1 (hypothetical protein Csa_018634 [Cucumis sativus])

HSP 1 Score: 122.1 bits (305), Expect = 1.7e-24
Identity = 59/60 (98.33%), Postives = 59/60 (98.33%), Query Frame = 0 

Query: 1  MSLFSLIFRLFPSCLCSSPVSDVGKEIPVKKLAAPAETKEAPIEVGNSHVNSYHSHLYWR 60
          MSLFSLIFRLFPSCL SSPVSDVGKEIPVKKLAAPAETKEAPIEVGNSHVNSYHSHLYWR
Sbjct: 1  MSLFSLIFRLFPSCLSSSPVSDVGKEIPVKKLAAPAETKEAPIEVGNSHVNSYHSHLYWR 60

The following BLAST results are available for this feature:
BLAST of CSPI02G18150 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI02G18150 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LKG48.1e-2598.33Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G351860 PE=4 SV=1[more]
BLAST of CSPI02G18150 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN62405.11.7e-2498.33hypothetical protein Csa_018634 [Cucumis sativus][more]
BLAST of CSPI02G18150 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI02G18150.1CSPI02G18150.1mRNA